Ontology
imports: biopax-level1.owl
comment: NIL Version 2.

catalysis29820
type: catalysis
CONTROLLED: biochemicalReaction29814
CONTROLLER: phys-ent-participant27205
NAME: SULFITE OXIDASE
XREF: unificationXref29821

biochemicalReaction29814
type: biochemicalReaction
LEFT: phys-ent-participant24325
LEFT: phys-ent-participant29817
LEFT: phys-ent-participant20951
NAME: SO3OXTFER-RXN
RIGHT: phys-ent-participant24975
RIGHT: phys-ent-participant29819
RIGHT: phys-ent-participant23348
XREF: unificationXref29815

phys-ent-participant24325
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24320
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24320
type: smallMolecule
MOLECULAR-WEIGHT: 80.058
NAME: SO3-2
STRUCTURE: chemicalStructure24324
SYNONYMS: SO3
SYNONYMS: sulfite
XREF: unificationXref24323
XREF: unificationXref24322
XREF: unificationXref24321

chemicalStructure24324
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SO3-atom1" elementType="S" x2="-0.00165" y2="-1.0"/> <atom id="SO3-atom2" elementType="O" x2="-0.00165" y2="-0.00165"/> <atom id="SO3-atom3" elementType="O" x2="-1.0" y2="-1.0" formalCharge="-1"/> <atom id="SO3-atom4" elementType="O" x2="0.99671" y2="-1.0" formalCharge="-1"/> <bond id="SO3-bond1" atomRefs="SO3-atom4 SO3-atom1" order="1"/> <bond id="SO3-bond2" atomRefs="SO3-atom3 SO3-atom1" order="1"/> <bond id="SO3-bond3" atomRefs="SO3-atom2 SO3-atom1" order="2"/> <formula concise="O 3 S 1" formalCharge="-2"/> 80.058 S([O-])([O-])=O trioxosulfate(2-)

unificationXref24323
type: unificationXref
DB: CapCyc
ID: SO3

unificationXref24322
type: unificationXref
DB: LIGAND
ID: C00094

unificationXref24321
type: unificationXref
DB: CAS
ID: 7782-99-2

openControlledVocabulary20912
type: openControlledVocabulary
TERM: CCO-CYTOPLASM
XREF: unificationXref20913

unificationXref20913
type: unificationXref
DB: GO
ID: GO:0005737

phys-ent-participant29817
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29816
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule29816
type: smallMolecule
NAME: oxidized cytochrome c

phys-ent-participant20951
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20943
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20943
type: smallMolecule
MOLECULAR-WEIGHT: 18.015
NAME: H2O
STRUCTURE: chemicalStructure20950
SYNONYMS: H20
SYNONYMS: hydrogen oxide
SYNONYMS: water
XREF: unificationXref20949
XREF: unificationXref20948
XREF: unificationXref20947
XREF: unificationXref20946
XREF: unificationXref20945
XREF: unificationXref20944

chemicalStructure20950
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="WATER-atom1" elementType="O" x2="0.08287" y2="-0.19337"/> <atom id="WATER-atom2" elementType="H" x2="-1.0" y2="-0.74586"/> <atom id="WATER-atom3" elementType="H" x2="0.99448" y2="-1.0"/> <bond id="WATER-bond1" atomRefs="WATER-atom3 WATER-atom1" order="1"/> <bond id="WATER-bond2" atomRefs="WATER-atom2 WATER-atom1" order="1"/> <formula concise="H 2 O 1" formalCharge="0"/> 18.015 [OH2]

unificationXref20949
type: unificationXref
DB: CapCyc
ID: WATER

unificationXref20948
type: unificationXref
DB: CAS
ID: 7732-18-5

unificationXref20947
type: unificationXref
DB: LIGAND
ID: C00001

unificationXref20946
type: unificationXref
DB: PubChem
ID: 962

unificationXref20945
type: unificationXref
DB: LIGAND
ID: C00001

unificationXref20944
type: unificationXref
DB: Chebi
ID: 15377

phys-ent-participant24975
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24969
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24969
type: smallMolecule
MOLECULAR-WEIGHT: 96.058
NAME: SO42-
STRUCTURE: chemicalStructure24974
SYNONYMS: SO4-2
SYNONYMS: sulfate
SYNONYMS: SO4--
XREF: unificationXref24973
XREF: unificationXref24972
XREF: unificationXref24971
XREF: unificationXref24970

chemicalStructure24974
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SULFATE-atom1" elementType="O" x2="1.4" y2="0.0"/> <atom id="SULFATE-atom2" elementType="O" x2="0.0" y2="-1.4"/> <atom id="SULFATE-atom3" elementType="O" x2="2.8" y2="-1.4" formalCharge="-1"/> <atom id="SULFATE-atom4" elementType="O" x2="1.4" y2="-2.8" formalCharge="-1"/> <atom id="SULFATE-atom5" elementType="S" x2="1.4" y2="-1.4"/> <bond id="SULFATE-bond1" atomRefs="SULFATE-atom4 SULFATE-atom5" order="1"/> <bond id="SULFATE-bond2" atomRefs="SULFATE-atom3 SULFATE-atom5" order="1"/> <bond id="SULFATE-bond3" atomRefs="SULFATE-atom2 SULFATE-atom5" order="2"/> <bond id="SULFATE-bond4" atomRefs="SULFATE-atom1 SULFATE-atom5" order="2"/> <formula concise="O 4 S 1" formalCharge="-2"/> 96.058 O=S([O-])([O-])=O tetraoxosulfate(2-)

unificationXref24973
type: unificationXref
DB: CapCyc
ID: SULFATE

unificationXref24972
type: unificationXref
DB: CAS
ID: 14808-79-8

unificationXref24971
type: unificationXref
DB: LIGAND
ID: C00059

unificationXref24970
type: unificationXref
DB: CAS
ID: 7664-93-9

phys-ent-participant29819
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29818
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule29818
type: smallMolecule
NAME: reduced cytochrome c

phys-ent-participant23348
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20956
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule20956
type: smallMolecule
MOLECULAR-WEIGHT: 1.008
NAME: H+
STRUCTURE: chemicalStructure20963
SYNONYMS: hydrogen ion
SYNONYMS: proton
SYNONYMS: H
XREF: unificationXref20962
XREF: unificationXref20961
XREF: unificationXref20960
XREF: unificationXref20959
XREF: unificationXref20958
XREF: unificationXref20957

chemicalStructure20963
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PROTON-atom1" elementType="H" x2="0.0" y2="0.0" formalCharge="1"/> <formula concise="H 1" formalCharge="1"/> 1.008 [H+]

unificationXref20962
type: unificationXref
DB: CapCyc
ID: PROTON

unificationXref20961
type: unificationXref
DB: LIGAND
ID: C00080

unificationXref20960
type: unificationXref
DB: CAS
ID: 12408-02-5

unificationXref20959
type: unificationXref
DB: PubChem
ID: 1038

unificationXref20958
type: unificationXref
DB: LIGAND
ID: C00080

unificationXref20957
type: unificationXref
DB: Chebi
ID: 24636

unificationXref29815
type: unificationXref
DB: CapCyc
ID: SO3OXTFER-RXN

phys-ent-participant27205
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27203
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27203
type: protein
NAME: SULFITE OXIDASE
ORGANISM: bioSource20982
XREF: unificationXref27204

bioSource20982
type: bioSource
NAME: Capsicum anuum

unificationXref27204
type: unificationXref
DB: CapCyc
ID: SGNU200858-MONOMER

openControlledVocabulary20983
type: openControlledVocabulary
TERM: cellular_component unknown
XREF: unificationXref20984

unificationXref20984
type: unificationXref
DB: GO
ID: GO:0008372

unificationXref29821
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-452

catalysis29802
type: catalysis
CONTROLLED: biochemicalReaction29782
CONTROLLER: phys-ent-participant29806
NAME: DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE
XREF: unificationXref29803

biochemicalReaction29782
type: biochemicalReaction
EC-NUMBER: 2.3.1.12
LEFT: phys-ent-participant21049
LEFT: phys-ent-participant29778
NAME: Dihydrolipoamide S-acetyltransferase
RIGHT: phys-ent-participant21436
RIGHT: phys-ent-participant29786
SYNONYMS: Lipoate acetyltransferase
SYNONYMS: Thioltransacetylase A
XREF: unificationXref29783

phys-ent-participant21049
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21043
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21043
type: smallMolecule
MOLECULAR-WEIGHT: 809.571
NAME: acetyl-CoA
STRUCTURE: chemicalStructure21048
SYNONYMS: acetyl coenzyme-A
SYNONYMS: ac-CoA
SYNONYMS: acetylcoenzyme-A
SYNONYMS: acetyl-S-CoA
SYNONYMS: ac-S-CoA
XREF: unificationXref21047
XREF: unificationXref21046
XREF: unificationXref21045
XREF: unificationXref21044

chemicalStructure21048
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACETYL-COA-atom1" elementType="C" x2="0.89109" y2="-0.26403"/> <atom id="ACETYL-COA-atom2" elementType="O" x2="0.22112" y2="-0.25413"/> <atom id="ACETYL-COA-atom3" elementType="C" x2="0.82508" y2="-0.38944"/> <atom id="ACETYL-COA-atom4" elementType="H" x2="0.55776" y2="-0.37624"/> <atom id="ACETYL-COA-atom5" elementType="N" x2="0.61386" y2="0.0198"/> <atom id="ACETYL-COA-atom6" elementType="O" x2="-0.63696" y2="-0.42904"/> <atom id="ACETYL-COA-atom7" elementType="C" x2="-0.86469" y2="-0.09571"/> <atom id="ACETYL-COA-atom8" elementType="O" x2="-0.10891" y2="-0.25413"/> <atom id="ACETYL-COA-atom9" elementType="C" x2="0.9967" y2="0.18482"/> <atom id="ACETYL-COA-atom10" elementType="N" x2="0.45875" y2="0.26073"/> <atom id="ACETYL-COA-atom11" elementType="C" x2="-0.60066" y2="0.08911"/> <atom id="ACETYL-COA-atom12" elementType="O" x2="0.71947" y2="-0.17162"/> <atom id="ACETYL-COA-atom13" elementType="O" x2="0.17162" y2="-0.88449"/> <atom id="ACETYL-COA-atom14" elementType="C" x2="-1.0" y2="-0.61386"/> <atom id="ACETYL-COA-atom15" elementType="O" x2="0.22112" y2="0.11551"/> <atom id="ACETYL-COA-atom16" elementType="O" x2="-0.31353" y2="-0.06931"/> <atom id="ACETYL-COA-atom17" elementType="N" x2="-1.0" y2="-0.17492"/> <atom id="ACETYL-COA-atom18" elementType="C" x2="-0.47525" y2="-0.17492"/> <atom id="ACETYL-COA-atom19" elementType="C" x2="0.17162" y2="-0.69967"/> <atom id="ACETYL-COA-atom20" elementType="C" x2="-0.63696" y2="-0.61386"/> <atom id="ACETYL-COA-atom21" elementType="O" x2="0.62376" y2="-0.62046"/> <atom id="ACETYL-COA-atom22" elementType="C" x2="0.59406" y2="0.34653"/> <atom id="ACETYL-COA-atom23" elementType="N" x2="-0.44554" y2="-0.72607"/> <atom id="ACETYL-COA-atom24" elementType="C" x2="-0.60066" y2="-0.09571"/> <atom id="ACETYL-COA-atom25" elementType="N" x2="0.89109" y2="0.0264"/> <atom id="ACETYL-COA-atom26" elementType="H" x2="0.82508" y2="-0.27723"/> <atom id="ACETYL-COA-atom27" elementType="O" x2="0.80858" y2="-0.81518"/> <atom id="ACETYL-C…

unificationXref21047
type: unificationXref
DB: CapCyc
ID: ACETYL-COA

unificationXref21046
type: unificationXref
DB: LIGAND
ID: C00024

unificationXref21045
type: unificationXref
DB: UMBBD
ID: c0031

unificationXref21044
type: unificationXref
DB: CAS
ID: 72-89-9

phys-ent-participant29778
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29774
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29774
type: protein
NAME: enzyme N6-(dihydrolipoyl)lysine
ORGANISM: bioSource20982
SYNONYMS: protein-dihydrolipoate
XREF: unificationXref29775

unificationXref29775
type: unificationXref
DB: CapCyc
ID: ACEF-DIHYDROLIPOATE

phys-ent-participant21436
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21431
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21431
type: smallMolecule
COMMENT: NIL Coenzyme A (CoA) is a ubiquitous cofactor found in bacteria, plants, and animals. CoA participates in a large number of enzymatic reactions central to intermediary metabolism, including the oxidation of fatty acids, carbohydrates, and amino acids. Coenzyme A is the common acyl carrier in prokaryotic and eukaryotic cells, and is required for a multitude of reactions for both biosynthetic and degradative pathways |CITS: [16415216]|.
MOLECULAR-WEIGHT: 767.534
NAME: coenzyme A
STRUCTURE: chemicalStructure21435
SYNONYMS: CoA
SYNONYMS: co-A-SH
SYNONYMS: co-enzyme-A
SYNONYMS: co-A
SYNONYMS: HS-CoA
XREF: unificationXref21434
XREF: unificationXref21433
XREF: unificationXref21432

chemicalStructure21435
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CO-A-atom1" elementType="H" x2="12.5111" y2="-7.1722"/> <atom id="CO-A-atom2" elementType="H" x2="14.642" y2="-6.4841"/> <atom id="CO-A-atom3" elementType="H" x2="15.1689" y2="-7.1722"/> <atom id="CO-A-atom4" elementType="H" x2="13.038" y2="-6.4841"/> <atom id="CO-A-atom5" elementType="C" x2="3.208" y2="-6.416"/> <atom id="CO-A-atom6" elementType="C" x2="3.208" y2="-3.5512"/> <atom id="CO-A-atom7" elementType="N" x2="12.8087" y2="0.0"/> <atom id="CO-A-atom8" elementType="O" x2="2.2913" y2="-7.6991"/> <atom id="CO-A-atom9" elementType="O" x2="1.0771" y2="-3.5512"/> <atom id="CO-A-atom10" elementType="O" x2="11.6177" y2="-9.8758"/> <atom id="CO-A-atom11" elementType="O" x2="7.149" y2="-3.3451"/> <atom id="CO-A-atom12" elementType="O" x2="9.7843" y2="-3.3451"/> <atom id="CO-A-atom13" elementType="O" x2="2.1766" y2="-7.0576"/> <atom id="CO-A-atom14" elementType="O" x2="14.642" y2="-8.1803"/> <atom id="CO-A-atom15" elementType="O" x2="13.038" y2="-11.3194"/> <atom id="CO-A-atom16" elementType="O" x2="14.4816" y2="-9.8758"/> <atom id="CO-A-atom17" elementType="O" x2="7.149" y2="-6.2098"/> <atom id="CO-A-atom18" elementType="O" x2="9.7843" y2="-6.2098"/> <atom id="CO-A-atom19" elementType="S" x2="7.562" y2="-9.0048"/> <atom id="CO-A-atom20" elementType="C" x2="11.7091" y2="-3.4141"/> <atom id="CO-A-atom21" elementType="C" x2="16.0166" y2="-2.7268"/> <atom id="CO-A-atom22" elementType="C" x2="6.4392" y2="-9.8758"/> <atom id="CO-A-atom23" elementType="C" x2="5.1785" y2="-9.1195"/> <atom id="CO-A-atom24" elementType="C" x2="0.0" y2="-9.2342"/> <atom id="CO-A-atom25" elementType="C" x2="1.0538" y2="-9.899"/> <atom id="CO-A-atom26" elementType="C" x2="4.2161" y2="-5.6364"/> <atom id="CO-A-atom27" elementType="C" x2="12.5111" y2="-4.7887"/> <atom id="CO-A-atom28" elementType="N" x2="11.7091" y2="-2.1309"/> <atom id="CO-A-atom29" elementType="N" x2="12.9466" y2="-4.0781"/> <atom id="CO-A-atom30" elementType="N" x2="15.1008" y2="-1.5583"/> <atom id="CO-A-atom31" elementT…

unificationXref21434
type: unificationXref
DB: CapCyc
ID: CO-A

unificationXref21433
type: unificationXref
DB: LIGAND
ID: C00010

unificationXref21432
type: unificationXref
DB: CAS
ID: 85-61-0

phys-ent-participant29786
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29784
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29784
type: protein
NAME: enzyme N6-(S-acetyldihydrolipoyl)lysine
ORGANISM: bioSource20982
SYNONYMS: B0115
SYNONYMS: AceF
SYNONYMS: protein-S-acetyldihydrolipoate
XREF: unificationXref29785

unificationXref29785
type: unificationXref
DB: CapCyc
ID: ACEF-S-ACETYLDIHYDROLIPOATE

unificationXref29783
type: unificationXref
DB: CapCyc
ID: RXN0-1133

phys-ent-participant29806
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29804
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29804
type: protein
NAME: DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref29805

unificationXref29805
type: unificationXref
DB: CapCyc
ID: SGNU196606-MONOMER

unificationXref29803
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-75

catalysis29797
type: catalysis
CONTROLLED: biochemicalReaction29782
CONTROLLER: phys-ent-participant29801
NAME: dihydrolipoamide S-acetyltransferase
XREF: unificationXref29798

phys-ent-participant29801
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29799
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29799
type: protein
NAME: dihydrolipoamide S-acetyltransferase
ORGANISM: bioSource20982
XREF: unificationXref29800

unificationXref29800
type: unificationXref
DB: CapCyc
ID: SGNU203961-MONOMER

unificationXref29798
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-652

catalysis29792
type: catalysis
CONTROLLED: biochemicalReaction29782
CONTROLLER: phys-ent-participant29796
NAME: dihydrolipoamide S-acetyltransferase
XREF: unificationXref29793

phys-ent-participant29796
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29794
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29794
type: protein
NAME: dihydrolipoamide S-acetyltransferase
ORGANISM: bioSource20982
XREF: unificationXref29795

unificationXref29795
type: unificationXref
DB: CapCyc
ID: SGNU204411-MONOMER

unificationXref29793
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-683

catalysis29787
type: catalysis
CONTROLLED: biochemicalReaction29782
CONTROLLER: phys-ent-participant29791
NAME: DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE
XREF: unificationXref29788

phys-ent-participant29791
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29789
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29789
type: protein
NAME: DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref29790

unificationXref29790
type: unificationXref
DB: CapCyc
ID: SGNU205209-MONOMER

unificationXref29788
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-713

catalysis29762
type: catalysis
CONTROLLED: biochemicalReaction29752
CONTROLLER: phys-ent-participant21523
NAME: ACETYL-COA SYNTHETASE
XREF: unificationXref29763

biochemicalReaction29752
type: biochemicalReaction
LEFT: phys-ent-participant27635
LEFT: phys-ent-participant29758
LEFT: phys-ent-participant21436
NAME: ACETYLSYNCLTH-RXN
RIGHT: phys-ent-participant21049
RIGHT: phys-ent-participant29759
XREF: unificationXref29753

phys-ent-participant27635
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27631
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27631
type: smallMolecule
MOLECULAR-WEIGHT: 28.01
NAME: CO
STRUCTURE: chemicalStructure27634
SYNONYMS: carbon monoxide
SYNONYMS: carbon monooxide
XREF: unificationXref27633
XREF: unificationXref27632

chemicalStructure27634
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBON-MONOXIDE-atom1" elementType="O" x2="-1.0" y2="-1.0" formalCharge="1"/> <atom id="CARBON-MONOXIDE-atom2" elementType="C" x2="0.99714285" y2="-1.0" formalCharge="-1"/> <bond id="CARBON-MONOXIDE-bond1" atomRefs="CARBON-MONOXIDE-atom2 CARBON-MONOXIDE-atom1" order="3"/> <formula concise="C 1 O 1" formalCharge="0"/> 28.01 [C-]#[O+]

unificationXref27633
type: unificationXref
DB: CapCyc
ID: CARBON-MONOXIDE

unificationXref27632
type: unificationXref
DB: CAS
ID: 630-08-0

phys-ent-participant29758
type: physicalEntityParticipant
PHYSICAL-ENTITY: complex29754
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

complex29754
type: complex
NAME: corrinoid/iron-sulfur protein, methylated
ORGANISM: bioSource20982
SYNONYMS: corrinoid/Fe-S protein, methylated
SYNONYMS: E[Co]-CH3]
XREF: unificationXref29755

unificationXref29755
type: unificationXref
DB: CapCyc
ID: CPLX-2

phys-ent-participant29759
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29756
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29756
type: protein
NAME: corrinoid/iron-sulfur protein
ORGANISM: bioSource20982
SYNONYMS: corrinoid/Fe-S protein
SYNONYMS: C/Fe-SP
SYNONYMS: E[Co]
XREF: unificationXref29757

unificationXref29757
type: unificationXref
DB: CapCyc
ID: CPLX-1

unificationXref29753
type: unificationXref
DB: CapCyc
ID: ACETYLSYNCLTH-RXN

phys-ent-participant21523
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein21521
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein21521
type: protein
NAME: ACETYL-COA SYNTHETASE
ORGANISM: bioSource20982
XREF: unificationXref21522

unificationXref21522
type: unificationXref
DB: CapCyc
ID: SGNU198189-MONOMER

unificationXref29763
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-275

catalysis29760
type: catalysis
CONTROLLED: biochemicalReaction29752
CONTROLLER: phys-ent-participant21518
NAME: ACETYL-COA SYNTHETASE
XREF: unificationXref29761

phys-ent-participant21518
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein21516
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein21516
type: protein
NAME: ACETYL-COA SYNTHETASE
ORGANISM: bioSource20982
XREF: unificationXref21517

unificationXref21517
type: unificationXref
DB: CapCyc
ID: SGNU199646-MONOMER

unificationXref29761
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-367

catalysis29750
type: catalysis
CONTROLLED: biochemicalReaction29745
CONTROLLER: phys-ent-participant29373
NAME: glycine decarboxylase
XREF: unificationXref29751

biochemicalReaction29745
type: biochemicalReaction
EC-NUMBER: 1.4.4.2
LEFT: phys-ent-participant29749
LEFT: phys-ent-participant21192
NAME: Glycine dehydrogenase (decarboxylating)
RIGHT: phys-ent-participant29731
RIGHT: phys-ent-participant21166
SYNONYMS: Glycine cleavage system P-protein
SYNONYMS: Glycine decarboxylase
XREF: unificationXref29746

phys-ent-participant29749
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29747
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29747
type: protein
NAME: H-Gcv-protein-(lipoyl)lysine
ORGANISM: bioSource20982
XREF: unificationXref29748

unificationXref29748
type: unificationXref
DB: CapCyc
ID: PROTEIN-LIPOYLLYSINE

phys-ent-participant21192
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21187
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21187
type: smallMolecule
MOLECULAR-WEIGHT: 75.067
NAME: glycine
STRUCTURE: chemicalStructure21191
SYNONYMS: G
SYNONYMS: aminoacetic acid
SYNONYMS: gly
XREF: unificationXref21190
XREF: unificationXref21189
XREF: unificationXref21188

chemicalStructure21191
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLY-atom1" elementType="C" x2="-0.33333" y2="-0.23051"/> <atom id="GLY-atom2" elementType="N" x2="0.99668" y2="-0.2272"/> <atom id="GLY-atom3" elementType="O" x2="-1.0" y2="0.15423"/> <atom id="GLY-atom4" elementType="O" x2="-0.33333" y2="-1.0"/> <atom id="GLY-atom5" elementType="C" x2="0.33002" y2="0.15423"/> <bond id="GLY-bond1" atomRefs="GLY-atom5 GLY-atom1" order="1"/> <bond id="GLY-bond2" atomRefs="GLY-atom4 GLY-atom1" order="1"/> <bond id="GLY-bond3" atomRefs="GLY-atom3 GLY-atom1" order="2"/> <bond id="GLY-bond4" atomRefs="GLY-atom2 GLY-atom5" order="1"/> <formula concise="C 2 H 5 N 1 O 2" formalCharge="0"/> 75.067 C(=O)(O)CN

unificationXref21190
type: unificationXref
DB: CapCyc
ID: GLY

unificationXref21189
type: unificationXref
DB: CAS
ID: 56-40-6

unificationXref21188
type: unificationXref
DB: LIGAND
ID: C00037

phys-ent-participant29731
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29729
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29729
type: protein
NAME: H-protein-S-(aminomethyldihydrolipoyl)lysine
ORGANISM: bioSource20982
XREF: unificationXref29730

unificationXref29730
type: unificationXref
DB: CapCyc
ID: AMINOMETHYLDIHYDROLIPOYL-GCVH

phys-ent-participant21166
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21158
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21158
type: smallMolecule
MOLECULAR-WEIGHT: 44.01
NAME: CO2
STRUCTURE: chemicalStructure21165
SYNONYMS: carbonic anhydride
SYNONYMS: carbonic acid gas
SYNONYMS: carbon dioxide
XREF: unificationXref21164
XREF: unificationXref21163
XREF: unificationXref21162
XREF: unificationXref21161
XREF: unificationXref21160
XREF: unificationXref21159

chemicalStructure21165
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBON-DIOXIDE-atom1" elementType="C" x2="-0.0013209581" y2="-1.0"/> <atom id="CARBON-DIOXIDE-atom2" elementType="O" x2="-1.0" y2="-1.0"/> <atom id="CARBON-DIOXIDE-atom3" elementType="O" x2="0.9973581" y2="-0.99735796"/> <bond id="CARBON-DIOXIDE-bond1" atomRefs="CARBON-DIOXIDE-atom3 CARBON-DIOXIDE-atom1" order="2"/> <bond id="CARBON-DIOXIDE-bond2" atomRefs="CARBON-DIOXIDE-atom2 CARBON-DIOXIDE-atom1" order="2"/> <formula concise="C 1 O 2" formalCharge="0"/> 44.01 C(=O)=O

unificationXref21164
type: unificationXref
DB: CapCyc
ID: CARBON-DIOXIDE

unificationXref21163
type: unificationXref
DB: CAS
ID: 124-38-9

unificationXref21162
type: unificationXref
DB: LIGAND
ID: C00011

unificationXref21161
type: unificationXref
DB: PubChem
ID: 280

unificationXref21160
type: unificationXref
DB: LIGAND
ID: C00011

unificationXref21159
type: unificationXref
DB: Chebi
ID: 16526

unificationXref29746
type: unificationXref
DB: CapCyc
ID: GCVP-RXN

phys-ent-participant29373
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29371
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29371
type: protein
NAME: glycine decarboxylase
ORGANISM: bioSource20982
XREF: unificationXref29372

unificationXref29372
type: unificationXref
DB: CapCyc
ID: SGNU197517-MONOMER

unificationXref29751
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-187

catalysis29740
type: catalysis
CONTROLLED: biochemicalReaction29727
CONTROLLER: phys-ent-participant29744
NAME: AMINOMETHYLTRANSFERASE
XREF: unificationXref29741

biochemicalReaction29727
type: biochemicalReaction
EC-NUMBER: 2.1.2.10
LEFT: phys-ent-participant29731
LEFT: phys-ent-participant21212
NAME: Aminomethyltransferase
RIGHT: phys-ent-participant29734
RIGHT: phys-ent-participant26970
RIGHT: phys-ent-participant21177
SYNONYMS: Tetrahydrofolate aminomethyltransferase
SYNONYMS: Glycine-cleavage system T-protein
XREF: unificationXref29728

phys-ent-participant21212
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21206
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21206
type: smallMolecule
MOLECULAR-WEIGHT: 445.434
NAME: tetrahydrofolate
STRUCTURE: chemicalStructure21211
SYNONYMS: H4PteGlu
SYNONYMS: 5,6,7,8-tetrahydrofolic acid
SYNONYMS: tetrahydrofolic acid
SYNONYMS: (6S)-tetrahydrofolate
SYNONYMS: H4PteGlu1
SYNONYMS: tetrahydropteroyl mono-L-glutamate
SYNONYMS: tetrahydrafolate
SYNONYMS: 5,6,7,8-tetrahydrofolate
SYNONYMS: THF
SYNONYMS: tetra-H-folate
SYNONYMS: th-folate
SYNONYMS: FH4
SYNONYMS: folate-H4
SYNONYMS: tetrahydropteroylglutamate
SYNONYMS: H4F
XREF: unificationXref21210
XREF: unificationXref21209
XREF: unificationXref21208
XREF: unificationXref21207

chemicalStructure21211
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="THF-atom1" elementType="H" x2="6.2042" y2="-6.6369"/> <atom id="THF-atom2" elementType="H" x2="0.0" y2="-2.8483"/> <atom id="THF-atom3" elementType="H" x2="7.1632" y2="-1.4542"/> <atom id="THF-atom4" elementType="N" x2="0.1037" y2="0.0"/> <atom id="THF-atom5" elementType="O" x2="15.1104" y2="-9.7116"/> <atom id="THF-atom6" elementType="O" x2="14.867" y2="-2.6596"/> <atom id="THF-atom7" elementType="O" x2="12.28" y2="-2.9038"/> <atom id="THF-atom8" elementType="O" x2="2.3729" y2="-4.2456"/> <atom id="THF-atom9" elementType="O" x2="17.1336" y2="-8.7833"/> <atom id="THF-atom10" elementType="O" x2="16.9893" y2="-3.8553"/> <atom id="THF-atom11" elementType="C" x2="10.3773" y2="-6.3201"/> <atom id="THF-atom12" elementType="C" x2="10.3773" y2="-3.9526"/> <atom id="THF-atom13" elementType="C" x2="8.9612" y2="-6.3201"/> <atom id="THF-atom14" elementType="C" x2="9.0346" y2="-3.9526"/> <atom id="THF-atom15" elementType="C" x2="15.0378" y2="-7.3201"/> <atom id="THF-atom16" elementType="C" x2="15.6476" y2="-6.1979"/> <atom id="THF-atom17" elementType="C" x2="5.96" y2="-0.854"/> <atom id="THF-atom18" elementType="C" x2="6.7653" y2="-3.5623"/> <atom id="THF-atom19" elementType="N" x2="2.3729" y2="-0.1461"/> <atom id="THF-atom20" elementType="N" x2="4.8129" y2="-0.1461"/> <atom id="THF-atom21" elementType="N" x2="13.6713" y2="-5.0997"/> <atom id="THF-atom22" elementType="N" x2="4.8129" y2="-2.8543"/> <atom id="THF-atom23" elementType="C" x2="15.7698" y2="-8.4672"/> <atom id="THF-atom24" elementType="C" x2="15.5989" y2="-3.8553"/> <atom id="THF-atom25" elementType="C" x2="12.28" y2="-4.319"/> <atom id="THF-atom26" elementType="C" x2="1.2259" y2="-0.854"/> <atom id="THF-atom27" elementType="C" x2="11.0357" y2="-5.1483"/> <atom id="THF-atom28" elementType="C" x2="8.3027" y2="-5.1244"/> <atom id="THF-atom29" elementType="C" x2="3.6172" y2="-0.854"/> <atom id="THF-atom30" elementType="C" x2="3.6172" y2="-2.171"/> <atom id="THF-atom31" elementType="C" x2="2.3729" y2="-2.8543"/>…

unificationXref21210
type: unificationXref
DB: CapCyc
ID: THF

unificationXref21209
type: unificationXref
DB: CAS
ID: 29347-89-5

unificationXref21208
type: unificationXref
DB: LIGAND
ID: C00101

unificationXref21207
type: unificationXref
DB: CAS
ID: 135-16-0

phys-ent-participant29734
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29732
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29732
type: protein
NAME: H-Gcv-protein-(dihydrolipoyl)lysine
ORGANISM: bioSource20982
XREF: unificationXref29733

unificationXref29733
type: unificationXref
DB: CapCyc
ID: DIHYDROLIPOYL-GCVH

phys-ent-participant26970
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26966
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26966
type: smallMolecule
MOLECULAR-WEIGHT: 457.445
NAME: 5,10-methylene-THF
STRUCTURE: chemicalStructure26969
SYNONYMS: 5,10-methylenetetrahydrofolate
SYNONYMS: N5,N10-methylenetetrahydrofolate
XREF: unificationXref26968
XREF: unificationXref26967

chemicalStructure26969
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="METHYLENE-THF-atom1" elementType="C" x2="-0.35787922" y2="-0.5287187"/> <atom id="METHYLENE-THF-atom2" elementType="O" x2="0.37849784" y2="-0.5699558"/> <atom id="METHYLENE-THF-atom3" elementType="C" x2="-0.622975" y2="-0.5346097"/> <atom id="METHYLENE-THF-atom4" elementType="C" x2="-0.16936672" y2="-0.97643596"/> <atom id="METHYLENE-THF-atom5" elementType="C" x2="0.18114877" y2="-0.7790869"/> <atom id="METHYLENE-THF-atom6" elementType="H" x2="-0.23711342" y2="-0.26951396"/> <atom id="METHYLENE-THF-atom7" elementType="C" x2="-0.35787922" y2="-0.38144332"/> <atom id="METHYLENE-THF-atom8" elementType="C" x2="-0.013254762" y2="-0.7260678"/> <atom id="METHYLENE-THF-atom9" elementType="O" x2="0.18114877" y2="-0.63770247"/> <atom id="METHYLENE-THF-atom10" elementType="C" x2="0.5022092" y2="-0.64359355"/> <atom id="METHYLENE-THF-atom11" elementType="N" x2="-0.87334317" y2="-0.5346097"/> <atom id="METHYLENE-THF-atom12" elementType="C" x2="-0.275405" y2="-0.65537554"/> <atom id="METHYLENE-THF-atom13" elementType="H" x2="-0.21354932" y2="-0.4874816"/> <atom id="METHYLENE-THF-atom14" elementType="C" x2="-0.013254762" y2="-0.97643596"/> <atom id="METHYLENE-THF-atom15" elementType="C" x2="0.8733431" y2="-0.84977907"/> <atom id="METHYLENE-THF-atom16" elementType="O" x2="-0.7496318" y2="-0.7496318"/> <atom id="METHYLENE-THF-atom17" elementType="N" x2="-0.49926364" y2="-0.6053019"/> <atom id="METHYLENE-THF-atom18" elementType="C" x2="-0.49926364" y2="-0.7496318"/> <atom id="METHYLENE-THF-atom19" elementType="O" x2="0.62592053" y2="-0.57290137"/> <atom id="METHYLENE-THF-atom20" elementType="C" x2="-0.622975" y2="-0.39027983"/> <atom id="METHYLENE-THF-atom21" elementType="N" x2="-0.9970545" y2="-0.31958765"/> <atom id="METHYLENE-THF-atom22" elementType="N" x2="-0.49926364" y2="-0.3166421"/> <atom id="METHYLENE-THF-atom23" elementType="N" x2="-0.3519882" y2="-0.79086894"/> <atom id="METHYLENE-THF-atom24" elementType="C" x2="0.62592053" y2="-0.84977907"/> <atom id="METHYLENE-…

unificationXref26968
type: unificationXref
DB: CapCyc
ID: METHYLENE-THF

unificationXref26967
type: unificationXref
DB: LIGAND
ID: C00143

phys-ent-participant21177
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21173
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21173
type: smallMolecule
MOLECULAR-WEIGHT: 17.03
NAME: ammonia
STRUCTURE: chemicalStructure21176
SYNONYMS: NH3
XREF: unificationXref21175
XREF: unificationXref21174

chemicalStructure21176
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="AMMONIA-atom1" elementType="H" x2="-1.0" y2="-1.0"/> <atom id="AMMONIA-atom2" elementType="H" x2="0.99489796" y2="-1.0"/> <atom id="AMMONIA-atom3" elementType="H" x2="-0.020408154" y2="-0.2755102"/> <atom id="AMMONIA-atom4" elementType="N" x2="-0.020408154" y2="-1.0"/> <bond id="AMMONIA-bond1" atomRefs="AMMONIA-atom4 AMMONIA-atom1" order="1"/> <bond id="AMMONIA-bond2" atomRefs="AMMONIA-atom4 AMMONIA-atom2" order="1"/> <bond id="AMMONIA-bond3" atomRefs="AMMONIA-atom3 AMMONIA-atom4" order="1"/> <formula concise="H 3 N 1" formalCharge="0"/> 17.03 [NH3]

unificationXref21175
type: unificationXref
DB: CapCyc
ID: AMMONIA

unificationXref21174
type: unificationXref
DB: CAS
ID: 7664-41-7

unificationXref29728
type: unificationXref
DB: CapCyc
ID: GCVT-RXN

phys-ent-participant29744
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29742
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29742
type: protein
NAME: AMINOMETHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref29743

unificationXref29743
type: unificationXref
DB: CapCyc
ID: SGNU197968-MONOMER

unificationXref29741
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-242

catalysis29735
type: catalysis
CONTROLLED: biochemicalReaction29727
CONTROLLER: phys-ent-participant29739
NAME: AMINOMETHYLTRANSFERASE
XREF: unificationXref29736

phys-ent-participant29739
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29737
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29737
type: protein
NAME: AMINOMETHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref29738

unificationXref29738
type: unificationXref
DB: CapCyc
ID: SGNU202194-MONOMER

unificationXref29736
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-553

catalysis29714
type: catalysis
CONTROLLED: biochemicalReaction29712
CONTROLLER: phys-ent-participant29718
NAME: thioesterase
XREF: unificationXref29715

biochemicalReaction29712
type: biochemicalReaction
EC-NUMBER: 3.1.2.14
LEFT: phys-ent-participant29573
LEFT: phys-ent-participant20951
NAME: RXN-7902
RIGHT: phys-ent-participant21543
RIGHT: phys-ent-participant29581
XREF: unificationXref29713

phys-ent-participant29573
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29571
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29571
type: protein
NAME: an acyl-ACP
ORGANISM: bioSource20982
SYNONYMS: acyl-ACP
SYNONYMS: acyl-[acyl carrier protein]
SYNONYMS: CH3(CH2)xCO-S-ACP
XREF: unificationXref29572

unificationXref29572
type: unificationXref
DB: CapCyc
ID: ACYL-ACP

phys-ent-participant21543
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21540
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21540
type: smallMolecule
COMMENT: A fatty acid is a carboxylic acid with a long unbranched aliphatic tail. Carboxylic acids as short as |FRAME:BUTYRIC_ACID| (4 carbon atoms) are considered to be fatty acids, even though fatty acids derived from natural fats and oils, such as |FRAME:CPD-195|, are usually at least 8 carbon atoms long. Most of the natural fatty acids have an even number of carbon atoms, since their biosynthesis involves acetyl-CoA, a coenzyme carrying a two-carbon-atom group. The various synonyms reflect some of the variations of names that can occur in the ENZYME db. It is not clear to what degree minor nuances should be distinguished between. A more formalized classification system of broadness of substrate specificity would definitely be useful.
NAME: a fatty acid
STRUCTURE: chemicalStructure21542
SYNONYMS: a long chain fatty acid
SYNONYMS: free fatty acid
SYNONYMS: a fatty acid anion
SYNONYMS: fatty acid
SYNONYMS: A LONG-CHAIN CARBOXYLIC ACID
SYNONYMS: A LONG-CHAIN ACID ANION
SYNONYMS: A LONG-CHAIN FATTY ACID ANION
SYNONYMS: a long-chain carboxylate
SYNONYMS: RCH2CH2COOH
XREF: unificationXref21541

chemicalStructure21542
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="a fatty acid" title="a fatty acid" dictRef="dicta fatty acid"> <atomArray> <atom id="a fatty acid-atom1" elementType="R" x2="0.99462366" y2="-0.123655915"/> <atom id="a fatty acid-atom2" elementType="C" x2="0.32795703" y2="0.3118279"/> <atom id="a fatty acid-atom3" elementType="C" x2="-0.26344085" y2="-0.123655915"/> <atom id="a fatty acid-atom4" elementType="O" x2="-1.0" y2="0.3118279"/> <atom id="a fatty acid-atom5" elementType="O" x2="-0.26344085" y2="-1.0"/> </atomArray> <bondArray> <bond id="a fatty acid-bond1" atomRefs="a fatty acid-atom5 a fatty acid-atom3" order="2"/> <bond id="a fatty acid-bond2" atomRefs="a fatty acid-atom4 a fatty acid-atom3" order="1"/> <bond id="a fatty acid-bond3" atomRefs="a fatty acid-atom3 a fatty acid-atom2" order="1"/> <bond id="a fatty acid-bond4" atomRefs="a fatty acid-atom2 a fatty acid-atom1" order="1"/> </bondArray> <formula concise="C 2 H 3 O 2 R 1" formalCharge="0"/> </molecule> </cml>

unificationXref21541
type: unificationXref
DB: CapCyc
ID: a fatty acid

phys-ent-participant29581
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29528
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29528
type: protein
NAME: acyl carrier protein
ORGANISM: bioSource20982
SYNONYMS: [acyl-carrier protein]
SYNONYMS: a holo-[acyl-carrier protein]
SYNONYMS: B1094
SYNONYMS: AcpP
SYNONYMS: holo-[acyl-carrier protein]
SYNONYMS: ACP-SH
SYNONYMS: ACP
XREF: unificationXref29530
XREF: unificationXref29529

unificationXref29530
type: unificationXref
DB: CapCyc
ID: ACP

unificationXref29529
type: unificationXref
DB: Wikipedia
ID: Acyl_carrier_protein

unificationXref29713
type: unificationXref
DB: CapCyc
ID: RXN-7902

phys-ent-participant29718
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29716
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29716
type: protein
NAME: MONOMER2KO-797
ORGANISM: bioSource20982
SYNONYMS: thiioesterase
XREF: unificationXref29717

unificationXref29717
type: unificationXref
DB: CapCyc
ID: MONOMER2KO-797

unificationXref29715
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-798

catalysis29702
type: catalysis
CONTROLLED: biochemicalReaction29700
CONTROLLER: phys-ent-participant27810
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
XREF: unificationXref29703

biochemicalReaction29700
type: biochemicalReaction
EC-NUMBER: 1.17.4.1
LEFT: phys-ent-participant29678
LEFT: phys-ent-participant25132
NAME: UDPREDUCT-RXN
RIGHT: phys-ent-participant29681
RIGHT: phys-ent-participant25207
RIGHT: phys-ent-participant20951
XREF: unificationXref29701

phys-ent-participant29678
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29676
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29676
type: protein
NAME: a reduced thioredoxin
ORGANISM: bioSource20982
SYNONYMS: thioredoxin disulfide
XREF: unificationXref29677

unificationXref29677
type: unificationXref
DB: CapCyc
ID: Red-Thioredoxin

phys-ent-participant25132
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25127
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25127
type: smallMolecule
MOLECULAR-WEIGHT: 404.163
NAME: UDP
STRUCTURE: chemicalStructure25131
SYNONYMS: uridine-diphosphate
SYNONYMS: uridine-5'-diphosphate
XREF: unificationXref25130
XREF: unificationXref25129
XREF: unificationXref25128

chemicalStructure25131
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UDP-atom1" elementType="H" x2="9.0551" y2="-7.0266"/> <atom id="UDP-atom2" elementType="O" x2="11.4319" y2="-8.35"/> <atom id="UDP-atom3" elementType="O" x2="9.0762" y2="-4.2669"/> <atom id="UDP-atom4" elementType="O" x2="1.3538" y2="-3.2753"/> <atom id="UDP-atom5" elementType="O" x2="4.0686" y2="-3.2753"/> <atom id="UDP-atom6" elementType="O" x2="7.336" y2="-0.0021"/> <atom id="UDP-atom7" elementType="O" x2="10.2998" y2="0.0"/> <atom id="UDP-atom8" elementType="O" x2="0.0" y2="-1.9142"/> <atom id="UDP-atom9" elementType="O" x2="1.3538" y2="-0.562"/> <atom id="UDP-atom10" elementType="O" x2="4.0645" y2="-0.562"/> <atom id="UDP-atom11" elementType="C" x2="12.6256" y2="-6.315"/> <atom id="UDP-atom12" elementType="C" x2="12.6256" y2="-4.9431"/> <atom id="UDP-atom13" elementType="C" x2="6.437" y2="-2.8193"/> <atom id="UDP-atom14" elementType="O" x2="5.4253" y2="-1.9157"/> <atom id="UDP-atom15" elementType="O" x2="8.8155" y2="-3.1849"/> <atom id="UDP-atom16" elementType="O" x2="2.7105" y2="-1.9186"/> <atom id="UDP-atom17" elementType="C" x2="11.4355" y2="-6.9934"/> <atom id="UDP-atom18" elementType="C" x2="10.2607" y2="-4.9431"/> <atom id="UDP-atom19" elementType="C" x2="8.1372" y2="-1.0969"/> <atom id="UDP-atom20" elementType="C" x2="9.5013" y2="-1.0969"/> <atom id="UDP-atom21" elementType="C" x2="7.7255" y2="-2.395"/> <atom id="UDP-atom22" elementType="C" x2="9.9208" y2="-2.395"/> <atom id="UDP-atom23" elementType="N" x2="10.2607" y2="-6.315"/> <atom id="UDP-atom24" elementType="N" x2="11.4355" y2="-4.2498"/> <atom id="UDP-atom25" elementType="P" x2="1.3538" y2="-1.9186"/> <atom id="UDP-atom26" elementType="P" x2="4.0671" y2="-1.9186"/> <bond id="UDP-bond1" atomRefs="UDP-atom22 UDP-atom24" order="1"/> <bond id="UDP-bond2" atomRefs="UDP-atom20 UDP-atom22" order="1"/> <bond id="UDP-bond3" atomRefs="UDP-atom19 UDP-atom21" order="1"/> <bond id="UDP-bond4" atomRefs="UDP-atom19 UDP-atom20" order="1"/> <bond id="UDP-bond5" atomRefs="UDP-atom18 UDP-atom24" order="A"/…

unificationXref25130
type: unificationXref
DB: CapCyc
ID: UDP

unificationXref25129
type: unificationXref
DB: CAS
ID: 58-98-0

unificationXref25128
type: unificationXref
DB: LIGAND
ID: C00015

phys-ent-participant29681
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29679
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29679
type: protein
NAME: an oxidized thioredoxin
ORGANISM: bioSource20982
SYNONYMS: Oxidized Thioredoxin
XREF: unificationXref29680

unificationXref29680
type: unificationXref
DB: CapCyc
ID: Ox-Thioredoxin

phys-ent-participant25207
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25203
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25203
type: smallMolecule
MOLECULAR-WEIGHT: 388.164
NAME: dUDP
STRUCTURE: chemicalStructure25206
SYNONYMS: 2'-deoxyuridine-5'-diphosphate
SYNONYMS: deoxyuridine-diphosphate
XREF: unificationXref25205
XREF: unificationXref25204

chemicalStructure25206
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DUDP-atom1" elementType="H" x2="9.0423" y2="-7.0166"/> <atom id="DUDP-atom2" elementType="O" x2="11.4176" y2="-8.3376"/> <atom id="DUDP-atom3" elementType="O" x2="9.0649" y2="-4.2593"/> <atom id="DUDP-atom4" elementType="O" x2="1.352" y2="-3.269"/> <atom id="DUDP-atom5" elementType="O" x2="4.0635" y2="-3.269"/> <atom id="DUDP-atom6" elementType="O" x2="7.3267" y2="0.0"/> <atom id="DUDP-atom7" elementType="O" x2="1.352" y2="-0.5591"/> <atom id="DUDP-atom8" elementType="O" x2="0.0" y2="-1.9096"/> <atom id="DUDP-atom9" elementType="O" x2="4.0594" y2="-0.5591"/> <atom id="DUDP-atom10" elementType="C" x2="12.61" y2="-6.3049"/> <atom id="DUDP-atom11" elementType="C" x2="12.61" y2="-4.9348"/> <atom id="DUDP-atom12" elementType="C" x2="6.4289" y2="-2.8136"/> <atom id="DUDP-atom13" elementType="C" x2="9.4895" y2="-1.0934"/> <atom id="DUDP-atom14" elementType="O" x2="5.4185" y2="-1.9111"/> <atom id="DUDP-atom15" elementType="O" x2="8.8046" y2="-3.1787"/> <atom id="DUDP-atom16" elementType="O" x2="2.707" y2="-1.9141"/> <atom id="DUDP-atom17" elementType="C" x2="11.4213" y2="-6.9825"/> <atom id="DUDP-atom18" elementType="C" x2="10.2479" y2="-4.9348"/> <atom id="DUDP-atom19" elementType="C" x2="8.1271" y2="-1.0934"/> <atom id="DUDP-atom20" elementType="C" x2="7.7158" y2="-2.3898"/> <atom id="DUDP-atom21" elementType="C" x2="9.9083" y2="-2.3898"/> <atom id="DUDP-atom22" elementType="N" x2="10.2479" y2="-6.3049"/> <atom id="DUDP-atom23" elementType="N" x2="11.4213" y2="-4.2424"/> <atom id="DUDP-atom24" elementType="P" x2="1.352" y2="-1.9141"/> <atom id="DUDP-atom25" elementType="P" x2="4.062" y2="-1.9141"/> <bond id="DUDP-bond1" atomRefs="DUDP-atom21 DUDP-atom23" order="1"/> <bond id="DUDP-bond2" atomRefs="DUDP-atom19 DUDP-atom20" order="1"/> <bond id="DUDP-bond3" atomRefs="DUDP-atom18 DUDP-atom23" order="A"/> <bond id="DUDP-bond4" atomRefs="DUDP-atom22 DUDP-atom18" order="A"/> <bond id="DUDP-bond5" atomRefs="DUDP-atom17 DUDP-atom22" order="A"/> <bond id="DUDP-bond6" ato…

unificationXref25205
type: unificationXref
DB: CapCyc
ID: DUDP

unificationXref25204
type: unificationXref
DB: LIGAND
ID: C01346

unificationXref29701
type: unificationXref
DB: CapCyc
ID: UDPREDUCT-RXN

phys-ent-participant27810
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27808
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27808
type: protein
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
ORGANISM: bioSource20982
XREF: unificationXref27809

unificationXref27809
type: unificationXref
DB: CapCyc
ID: SGNU197239-MONOMER

unificationXref29703
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-161

catalysis29698
type: catalysis
CONTROLLED: biochemicalReaction29696
CONTROLLER: phys-ent-participant27810
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
XREF: unificationXref29699

biochemicalReaction29696
type: biochemicalReaction
EC-NUMBER: 1.17.4.1
LEFT: phys-ent-participant29678
LEFT: phys-ent-participant25286
NAME: CDPREDUCT-RXN
RIGHT: phys-ent-participant29681
RIGHT: phys-ent-participant25256
RIGHT: phys-ent-participant20951
XREF: unificationXref29697

phys-ent-participant25286
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25281
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25281
type: smallMolecule
MOLECULAR-WEIGHT: 403.179
NAME: CDP
STRUCTURE: chemicalStructure25285
SYNONYMS: cytidine-diphosphate
SYNONYMS: cytidine-5'-diphosphate
XREF: unificationXref25284
XREF: unificationXref25283
XREF: unificationXref25282

chemicalStructure25285
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CDP-atom1" elementType="N" x2="8.5918" y2="-5.0505"/> <atom id="CDP-atom2" elementType="O" x2="7.167" y2="-2.5808"/> <atom id="CDP-atom3" elementType="O" x2="4.1382" y2="-1.9811"/> <atom id="CDP-atom4" elementType="O" x2="2.4961" y2="-1.9811"/> <atom id="CDP-atom5" elementType="O" x2="6.1144" y2="-0.0013"/> <atom id="CDP-atom6" elementType="O" x2="7.907" y2="0.0"/> <atom id="CDP-atom7" elementType="O" x2="4.1357" y2="-0.3399"/> <atom id="CDP-atom8" elementType="O" x2="2.4961" y2="-0.3399"/> <atom id="CDP-atom9" elementType="C" x2="9.3138" y2="-3.8196"/> <atom id="CDP-atom10" elementType="C" x2="9.3138" y2="-2.9898"/> <atom id="CDP-atom11" elementType="C" x2="5.5707" y2="-1.7052"/> <atom id="CDP-atom12" elementType="N" x2="7.8834" y2="-3.8196"/> <atom id="CDP-atom13" elementType="O" x2="4.9587" y2="-1.1587"/> <atom id="CDP-atom14" elementType="O" x2="7.0093" y2="-1.9263"/> <atom id="CDP-atom15" elementType="O" x2="1.6773" y2="-1.1578"/> <atom id="CDP-atom16" elementType="O" x2="3.3167" y2="-1.1605"/> <atom id="CDP-atom17" elementType="C" x2="7.8834" y2="-2.9898"/> <atom id="CDP-atom18" elementType="C" x2="8.594" y2="-4.2299"/> <atom id="CDP-atom19" elementType="C" x2="6.599" y2="-0.6634"/> <atom id="CDP-atom20" elementType="C" x2="7.4241" y2="-0.6634"/> <atom id="CDP-atom21" elementType="C" x2="6.35" y2="-1.4486"/> <atom id="CDP-atom22" elementType="C" x2="7.6778" y2="-1.4486"/> <atom id="CDP-atom23" elementType="N" x2="8.594" y2="-2.5705"/> <atom id="CDP-atom24" elementType="P" x2="4.1373" y2="-1.1605"/> <atom id="CDP-atom25" elementType="P" x2="2.4961" y2="-1.1605"/> <bond id="CDP-bond1" atomRefs="CDP-atom1 CDP-atom18" order="1"/> <bond id="CDP-bond2" atomRefs="CDP-atom2 CDP-atom17" order="2"/> <bond id="CDP-bond3" atomRefs="CDP-atom3 CDP-atom24" order="2"/> <bond id="CDP-bond4" atomRefs="CDP-atom4 CDP-atom25" order="2"/> <bond id="CDP-bond5" atomRefs="CDP-atom19 CDP-atom5" order="1"/> <bond id="CDP-bond6" atomRefs="CDP-atom20 CDP-atom6" order="1"/> <bond…

unificationXref25284
type: unificationXref
DB: CapCyc
ID: CDP

unificationXref25283
type: unificationXref
DB: CAS
ID: 63-38-7

unificationXref25282
type: unificationXref
DB: LIGAND
ID: C00112

phys-ent-participant25256
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25251
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25251
type: smallMolecule
MOLECULAR-WEIGHT: 387.179
NAME: dCDP
STRUCTURE: chemicalStructure25255
SYNONYMS: 2'-deoxycytidine diphosphate
SYNONYMS: 2'-deoxycytidine-5'-diphosphate
SYNONYMS: deoxycytidine-diphosphate
XREF: unificationXref25254
XREF: unificationXref25253
XREF: unificationXref25252

chemicalStructure25255
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DCDP-atom1" elementType="N" x2="8.5918" y2="-5.0505"/> <atom id="DCDP-atom2" elementType="O" x2="7.167" y2="-2.5808"/> <atom id="DCDP-atom3" elementType="O" x2="4.1382" y2="-1.9811"/> <atom id="DCDP-atom4" elementType="O" x2="6.1144" y2="-0.0013"/> <atom id="DCDP-atom5" elementType="O" x2="4.1357" y2="-0.3399"/> <atom id="DCDP-atom6" elementType="C" x2="9.3138" y2="-3.8196"/> <atom id="DCDP-atom7" elementType="C" x2="9.3138" y2="-2.9898"/> <atom id="DCDP-atom8" elementType="C" x2="5.5707" y2="-1.7052"/> <atom id="DCDP-atom9" elementType="N" x2="7.8834" y2="-3.8196"/> <atom id="DCDP-atom10" elementType="O" x2="4.9587" y2="-1.1587"/> <atom id="DCDP-atom11" elementType="O" x2="7.0093" y2="-1.9263"/> <atom id="DCDP-atom12" elementType="C" x2="7.8834" y2="-2.9898"/> <atom id="DCDP-atom13" elementType="C" x2="8.594" y2="-4.2299"/> <atom id="DCDP-atom14" elementType="C" x2="6.599" y2="-0.6634"/> <atom id="DCDP-atom15" elementType="C" x2="7.4241" y2="-0.6634"/> <atom id="DCDP-atom16" elementType="C" x2="6.35" y2="-1.4486"/> <atom id="DCDP-atom17" elementType="C" x2="7.6778" y2="-1.4486"/> <atom id="DCDP-atom18" elementType="N" x2="8.594" y2="-2.5705"/> <atom id="DCDP-atom19" elementType="P" x2="4.1373" y2="-1.1605"/> <atom id="DCDP-atom20" elementType="O" x2="3.3167" y2="-1.1605"/> <atom id="DCDP-atom21" elementType="O" x2="2.4917" y2="-1.9873"/> <atom id="DCDP-atom22" elementType="O" x2="2.4892" y2="-0.3373"/> <atom id="DCDP-atom23" elementType="P" x2="2.4908" y2="-1.1623"/> <atom id="DCDP-atom24" elementType="O" x2="1.6658" y2="-1.1623"/> <bond id="DCDP-bond1" atomRefs="DCDP-atom24 DCDP-atom23" order="1"/> <bond id="DCDP-bond2" atomRefs="DCDP-atom22 DCDP-atom23" order="1"/> <bond id="DCDP-bond3" atomRefs="DCDP-atom21 DCDP-atom23" order="2"/> <bond id="DCDP-bond4" atomRefs="DCDP-atom20 DCDP-atom23" order="1"/> <bond id="DCDP-bond5" atomRefs="DCDP-atom1 DCDP-atom13" order="1"/> <bond id="DCDP-bond6" atomRefs="DCDP-atom2 DCDP-atom12" order="2"/> <bond id="DCDP-bond…

unificationXref25254
type: unificationXref
DB: CapCyc
ID: DCDP

unificationXref25253
type: unificationXref
DB: CAS
ID: 800-73-7

unificationXref25252
type: unificationXref
DB: LIGAND
ID: C00705

unificationXref29697
type: unificationXref
DB: CapCyc
ID: CDPREDUCT-RXN

unificationXref29699
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-162

catalysis29686
type: catalysis
CONTROLLED: biochemicalReaction29684
CONTROLLER: phys-ent-participant27810
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
XREF: unificationXref29687

biochemicalReaction29684
type: biochemicalReaction
EC-NUMBER: 1.17.4.1
LEFT: phys-ent-participant29678
LEFT: phys-ent-participant21290
NAME: GDPREDUCT-RXN
RIGHT: phys-ent-participant29681
RIGHT: phys-ent-participant25190
RIGHT: phys-ent-participant20951
XREF: unificationXref29685

phys-ent-participant21290
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21285
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21285
type: smallMolecule
MOLECULAR-WEIGHT: 443.203
NAME: GDP
STRUCTURE: chemicalStructure21289
SYNONYMS: ppG
SYNONYMS: guanosine-5'-diphosphate
SYNONYMS: guanosine-diphosphate
XREF: unificationXref21288
XREF: unificationXref21287
XREF: unificationXref21286

chemicalStructure21289
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GDP-atom1" elementType="N" x2="3.7235" y2="-2.6764"/> <atom id="GDP-atom2" elementType="O" x2="5.1456" y2="-5.146"/> <atom id="GDP-atom3" elementType="O" x2="0.8195" y2="-1.9862"/> <atom id="GDP-atom4" elementType="O" x2="2.4628" y2="-1.9862"/> <atom id="GDP-atom5" elementType="O" x2="4.4406" y2="-0.0049"/> <atom id="GDP-atom6" elementType="O" x2="6.2372" y2="0.0"/> <atom id="GDP-atom7" elementType="O" x2="0.0" y2="-1.1623"/> <atom id="GDP-atom8" elementType="O" x2="0.8195" y2="-0.3438"/> <atom id="GDP-atom9" elementType="O" x2="2.4603" y2="-0.3438"/> <atom id="GDP-atom10" elementType="C" x2="7.1399" y2="-3.4947"/> <atom id="GDP-atom11" elementType="C" x2="3.8964" y2="-1.7102"/> <atom id="GDP-atom12" elementType="N" x2="6.6586" y2="-4.1694"/> <atom id="GDP-atom13" elementType="O" x2="3.284" y2="-1.1632"/> <atom id="GDP-atom14" elementType="O" x2="5.3361" y2="-1.9314"/> <atom id="GDP-atom15" elementType="O" x2="1.6407" y2="-1.165"/> <atom id="GDP-atom16" elementType="C" x2="4.4367" y2="-3.0837"/> <atom id="GDP-atom17" elementType="C" x2="5.1479" y2="-4.3248"/> <atom id="GDP-atom18" elementType="C" x2="5.8682" y2="-3.9141"/> <atom id="GDP-atom19" elementType="C" x2="5.8682" y2="-3.0837"/> <atom id="GDP-atom20" elementType="C" x2="4.9255" y2="-0.6675"/> <atom id="GDP-atom21" elementType="C" x2="5.7513" y2="-0.6675"/> <atom id="GDP-atom22" elementType="C" x2="4.6764" y2="-1.4533"/> <atom id="GDP-atom23" elementType="C" x2="6.0052" y2="-1.4533"/> <atom id="GDP-atom24" elementType="N" x2="6.6566" y2="-2.8356"/> <atom id="GDP-atom25" elementType="P" x2="0.8195" y2="-1.165"/> <atom id="GDP-atom26" elementType="P" x2="2.4619" y2="-1.165"/> <atom id="GDP-atom27" elementType="N" x2="5.1479" y2="-2.664"/> <atom id="GDP-atom28" elementType="N" x2="4.4367" y2="-3.9141"/> <atom id="GDP-atom29" elementType="H" x2="3.7222" y2="-4.3266"/> <bond id="GDP-bond1" atomRefs="GDP-atom28 GDP-atom29" order="1"/> <bond id="GDP-bond2" atomRefs="GDP-atom23 GDP-atom24" order="1"/> <bond…

unificationXref21288
type: unificationXref
DB: CapCyc
ID: GDP

unificationXref21287
type: unificationXref
DB: CAS
ID: 146-91-8

unificationXref21286
type: unificationXref
DB: LIGAND
ID: C00035

phys-ent-participant25190
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25185
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25185
type: smallMolecule
MOLECULAR-WEIGHT: 427.203
NAME: dGDP
STRUCTURE: chemicalStructure25189
SYNONYMS: 2'-deoxyguanosine-5'-diphosphate
SYNONYMS: deoxyguanosine-diphosphate
XREF: unificationXref25188
XREF: unificationXref25187
XREF: unificationXref25186

chemicalStructure25189
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DGDP-atom1" elementType="N" x2="3.6108" y2="-2.7704"/> <atom id="DGDP-atom2" elementType="O" x2="5.034" y2="-5.242"/> <atom id="DGDP-atom3" elementType="O" x2="0.8201" y2="-1.9828"/> <atom id="DGDP-atom4" elementType="O" x2="2.4647" y2="-1.9828"/> <atom id="DGDP-atom5" elementType="O" x2="4.4441" y2="0.0"/> <atom id="DGDP-atom6" elementType="O" x2="0.0" y2="-1.1583"/> <atom id="DGDP-atom7" elementType="O" x2="0.8201" y2="-0.3391"/> <atom id="DGDP-atom8" elementType="O" x2="2.4623" y2="-0.3391"/> <atom id="DGDP-atom9" elementType="C" x2="7.0299" y2="-3.5893"/> <atom id="DGDP-atom10" elementType="C" x2="3.8995" y2="-1.7066"/> <atom id="DGDP-atom11" elementType="C" x2="5.7558" y2="-0.6632"/> <atom id="DGDP-atom12" elementType="N" x2="6.5482" y2="-4.2647"/> <atom id="DGDP-atom13" elementType="N" x2="4.3246" y2="-4.0092"/> <atom id="DGDP-atom14" elementType="O" x2="3.2866" y2="-1.1592"/> <atom id="DGDP-atom15" elementType="O" x2="5.3404" y2="-1.928"/> <atom id="DGDP-atom16" elementType="O" x2="1.642" y2="-1.161"/> <atom id="DGDP-atom17" elementType="C" x2="4.3246" y2="-3.1781"/> <atom id="DGDP-atom18" elementType="C" x2="5.0363" y2="-4.4201"/> <atom id="DGDP-atom19" elementType="C" x2="5.7572" y2="-4.0092"/> <atom id="DGDP-atom20" elementType="C" x2="5.7572" y2="-3.1781"/> <atom id="DGDP-atom21" elementType="C" x2="4.9295" y2="-0.6632"/> <atom id="DGDP-atom22" elementType="C" x2="4.6801" y2="-1.4496"/> <atom id="DGDP-atom23" elementType="C" x2="6.01" y2="-1.4496"/> <atom id="DGDP-atom24" elementType="N" x2="6.5462" y2="-2.9298"/> <atom id="DGDP-atom25" elementType="P" x2="0.8201" y2="-1.161"/> <atom id="DGDP-atom26" elementType="P" x2="2.4638" y2="-1.161"/> <atom id="DGDP-atom27" elementType="N" x2="5.0363" y2="-2.758"/> <atom id="DGDP-atom28" elementType="H" x2="3.6101" y2="-4.4217"/> <bond id="DGDP-bond1" atomRefs="DGDP-atom13 DGDP-atom28" order="1"/> <bond id="DGDP-bond2" atomRefs="DGDP-atom23 DGDP-atom24" order="1"/> <bond id="DGDP-bond3" atomRefs="DGDP-ato…

unificationXref25188
type: unificationXref
DB: CapCyc
ID: DGDP

unificationXref25187
type: unificationXref
DB: CAS
ID: 102783-74-4

unificationXref25186
type: unificationXref
DB: LIGAND
ID: C00361

unificationXref29685
type: unificationXref
DB: CapCyc
ID: GDPREDUCT-RXN

unificationXref29687
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-159

catalysis29682
type: catalysis
CONTROLLED: biochemicalReaction29674
CONTROLLER: phys-ent-participant27810
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
XREF: unificationXref29683

biochemicalReaction29674
type: biochemicalReaction
EC-NUMBER: 1.17.4.1
LEFT: phys-ent-participant29678
LEFT: phys-ent-participant20977
NAME: ADPREDUCT-RXN
RIGHT: phys-ent-participant29681
RIGHT: phys-ent-participant25268
RIGHT: phys-ent-participant20951
XREF: unificationXref29675

phys-ent-participant20977
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20971
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20971
type: smallMolecule
MOLECULAR-WEIGHT: 427.203
NAME: ADP
STRUCTURE: chemicalStructure20976
SYNONYMS: adenosine pyrophosphate
SYNONYMS: adenosine 5'-pyrophosphate
SYNONYMS: adenosine-5'-diphosphate
SYNONYMS: adenosine-diphosphate
SYNONYMS: adenosine-5-diphosphate
XREF: unificationXref20975
XREF: unificationXref20974
XREF: unificationXref20973
XREF: unificationXref20972

chemicalStructure20976
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ADP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="ADP-atom2" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="ADP-atom3" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="ADP-atom4" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="ADP-atom5" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="ADP-atom6" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="ADP-atom7" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="ADP-atom8" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="ADP-atom9" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="ADP-atom10" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="ADP-atom11" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="ADP-atom12" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="ADP-atom13" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="ADP-atom14" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="ADP-atom15" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="ADP-atom16" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="ADP-atom17" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="ADP-atom18" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="ADP-atom19" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="ADP-atom20" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="ADP-atom21" elementType="N" x2="7.9852" y2="-6.4411"/> <atom id="ADP-atom22" elementType="O" x2="9.0842" y2="-1.3204"/> <atom id="ADP-atom23" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="ADP-atom24" elementType="O" x2="3.6666" y2="-3.3112"/> <atom id="ADP-atom25" elementType="O" x2="3.6641" y2="-1.6612"/> <atom id="ADP-atom26" elementType="P" x2="3.6657" y2="-2.4862"/> <atom id="ADP-atom27" elementType="O" x2="2.8407" y2="-2.4862"/> <bond id="ADP-bond1" atomRefs="ADP-atom27 ADP-atom26" order="1"/> <bond id="ADP-bond2" atomRefs="ADP-atom25 ADP-atom26" order="1"/> <bond id="ADP-bond3" atomRefs="ADP-atom24 ADP-atom26" order="2"/> <bond id="ADP-bond4" atomRefs="ADP-atom23 ADP-atom26" ord…

unificationXref20975
type: unificationXref
DB: CapCyc
ID: ADP

unificationXref20974
type: unificationXref
DB: CAS
ID: 58-64-0

unificationXref20973
type: unificationXref
DB: LIGAND
ID: C00008

unificationXref20972
type: unificationXref
DB: CAS
ID: 20398-34-9

phys-ent-participant25268
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25263
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25263
type: smallMolecule
MOLECULAR-WEIGHT: 411.204
NAME: dADP
STRUCTURE: chemicalStructure25267
SYNONYMS: deoxyadenosine-diphosphate
SYNONYMS: 2'-deoxyadenosine-5'-diphosphate
XREF: unificationXref25266
XREF: unificationXref25265
XREF: unificationXref25264

chemicalStructure25267
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DADP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="DADP-atom2" elementType="O" x2="3.6711" y2="-3.3049"/> <atom id="DADP-atom3" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="DADP-atom4" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="DADP-atom5" elementType="O" x2="3.6711" y2="-1.6639"/> <atom id="DADP-atom6" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="DADP-atom7" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="DADP-atom8" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="DADP-atom9" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="DADP-atom10" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="DADP-atom11" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="DADP-atom12" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="DADP-atom13" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="DADP-atom14" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="DADP-atom15" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="DADP-atom16" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="DADP-atom17" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="DADP-atom18" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="DADP-atom19" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="DADP-atom20" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="DADP-atom21" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="DADP-atom22" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="DADP-atom23" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="DADP-atom24" elementType="P" x2="3.6711" y2="-2.4844"/> <atom id="DADP-atom25" elementType="O" x2="2.8523" y2="-2.4817"/> <atom id="DADP-atom26" elementType="N" x2="7.9852" y2="-6.4411"/> <bond id="DADP-bond1" atomRefs="DADP-atom26 DADP-atom14" order="1"/> <bond id="DADP-bond2" atomRefs="DADP-atom1 DADP-atom23" order="2"/> <bond id="DADP-bond3" atomRefs="DADP-atom2 DADP-atom24" order="2"/> <bond id="DADP-bond4" atomRefs="DADP-atom18 DADP-atom3" order="1"/> <bond id="DADP-bond5"…

unificationXref25266
type: unificationXref
DB: CapCyc
ID: DADP

unificationXref25265
type: unificationXref
DB: CAS
ID: 2793-06-8

unificationXref25264
type: unificationXref
DB: LIGAND
ID: C00206

unificationXref29675
type: unificationXref
DB: CapCyc
ID: ADPREDUCT-RXN

unificationXref29683
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-160

catalysis29650
type: catalysis
CONTROLLED: biochemicalReaction29648
CONTROLLER: phys-ent-participant29627
NAME: BETA-HYDROXYACYL-ACP DEHYDRATASE
XREF: unificationXref29651

biochemicalReaction29648
type: biochemicalReaction
EC-NUMBER: 4.2.1.60
LEFT: phys-ent-participant29643
NAME: 3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
RIGHT: phys-ent-participant29576
RIGHT: phys-ent-participant20951
XREF: unificationXref29649

phys-ent-participant29643
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29641
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29641
type: protein
NAME: a D-3-hydroxy-acyl-ACP
ORGANISM: bioSource20982
SYNONYMS: (3R)-3-hydroxyacyl-[acyl-carrier protein]
SYNONYMS: CH3(CH2)xCHOHCH2CO-S-ACP
SYNONYMS: beta-OH-acyl-ACP
SYNONYMS: beta-hydroxy-acyl-ACP
XREF: unificationXref29642

unificationXref29642
type: unificationXref
DB: CapCyc
ID: OH-ACYL-ACP

phys-ent-participant29576
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29574
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29574
type: protein
NAME: a trans-delta2-enoyl-acyl-ACP
ORGANISM: bioSource20982
SYNONYMS: trans-2,3-dehydroacyl-[acyl-carrier protein]
SYNONYMS: trans-2,3-dehydroacyl-ACP
SYNONYMS: CH3(CH2)xCH=CHCO-S-ACP
SYNONYMS: α,β-trans-enoyl-ACP
XREF: unificationXref29575

unificationXref29575
type: unificationXref
DB: CapCyc
ID: TRANS-D2-ENOYL-ACP

unificationXref29649
type: unificationXref
DB: CapCyc
ID: 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN

phys-ent-participant29627
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29625
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29625
type: protein
NAME: BETA-HYDROXYACYL-ACP DEHYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref29626

unificationXref29626
type: unificationXref
DB: CapCyc
ID: SGNU202465-MONOMER

unificationXref29651
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-566

catalysis29644
type: catalysis
CONTROLLED: biochemicalReaction29639
CONTROLLER: phys-ent-participant29617
NAME: BETA-KETOACYL-ACP REDUCTASE
XREF: unificationXref29645

biochemicalReaction29639
type: biochemicalReaction
EC-NUMBER: 1.1.1.100
LEFT: phys-ent-participant29643
LEFT: phys-ent-participant26766
NAME: 3-oxoacyl-[acyl-carrier protein] reductase
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant29550
XREF: unificationXref29640

phys-ent-participant26766
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26758
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26758
type: smallMolecule
COMMENT: Nicotinamide adenine dinucleotide (NAD) and its phosphorylated derivative, nicotinamide adenine dinucleotide phosphate (NADP) are two of the most important coenzymes in redox reactions in the cell. Generally, NAD is involved in catabolic reactions, while NADP is involved in anabolic reactions. Because of the positive charge on the nitrogen atom in the nicotinamide ring, the oxidized forms of these compounds are often depicted as NAD+ and NADP+, respectively. Nicotinamide adenine dinucleotide (NAD) and its phosphorylated derivative, nicotinamide adenine dinucleotide phosphate (NADP) are two of the most important coenzymes in redox reactions in the cell. Generally, NAD is involved in catabolic reactions, while NADP is involved in anabolic reactions. Because of the positive charge on the nitrogen atom in the nicotinamide ring, the oxidized forms of these compounds are often depicted as NAD+ and NADP+, respectively.
MOLECULAR-WEIGHT: 744.418
NAME: NADP+
STRUCTURE: chemicalStructure26765
SYNONYMS: coenzyme II
SYNONYMS: triphosphopyridine nucleotide
SYNONYMS: nicotinamide adenine dinucleotide phosphate
SYNONYMS: NADP-oxidized
SYNONYMS: NADP-ox
SYNONYMS: NADP+
SYNONYMS: TPN
SYNONYMS: TPN+
SYNONYMS: TPN-ox
SYNONYMS: nicotinamide adenine dinucleotide-P
SYNONYMS: NADP(+)
SYNONYMS: NADP
XREF: unificationXref26764
XREF: unificationXref26763
XREF: unificationXref26762
XREF: unificationXref26761
XREF: unificationXref26760
XREF: unificationXref26759

chemicalStructure26765
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NADP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="NADP-atom2" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="NADP-atom3" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="NADP-atom4" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="NADP-atom5" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="NADP-atom6" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="NADP-atom7" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="NADP-atom8" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="NADP-atom9" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="NADP-atom10" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="NADP-atom11" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="NADP-atom12" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="NADP-atom13" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="NADP-atom14" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="NADP-atom15" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="NADP-atom16" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="NADP-atom17" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="NADP-atom18" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="NADP-atom19" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="NADP-atom20" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="NADP-atom21" elementType="N" x2="7.9852" y2="-6.4411"/> <atom id="NADP-atom22" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="NADP-atom23" elementType="O" x2="3.6666" y2="-3.3112"/> <atom id="NADP-atom24" elementType="O" x2="3.6641" y2="-1.6612"/> <atom id="NADP-atom25" elementType="P" x2="3.6657" y2="-2.4862"/> <atom id="NADP-atom26" elementType="O" x2="9.0842" y2="-1.3204"/> <atom id="NADP-atom27" elementType="P" x2="9.9092" y2="-1.3204"/> <atom id="NADP-atom28" elementType="O" x2="9.9092" y2="-2.1454"/> <atom id="NADP-atom29" elementType="O" x2="10.7342" y2="-1.3204"/> <atom id="NADP-atom30" elementType="O" x2="9.9092" y2="-0.4954"/> <atom id="NADP-atom31" elemen…

unificationXref26764
type: unificationXref
DB: CapCyc
ID: NADP

unificationXref26763
type: unificationXref
DB: CAS
ID: 53-59-8

unificationXref26762
type: unificationXref
DB: LIGAND
ID: C00006

unificationXref26761
type: unificationXref
DB: PubChem
ID: 5886

unificationXref26760
type: unificationXref
DB: LIGAND
ID: C00006

unificationXref26759
type: unificationXref
DB: Chebi
ID: 18009

phys-ent-participant26753
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26745
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26745
type: smallMolecule
MOLECULAR-WEIGHT: 745.426
NAME: NADPH
STRUCTURE: chemicalStructure26752
SYNONYMS: Nicotinamide adenine dinucleotide phosphate - reduced
SYNONYMS: NADPH+H+
SYNONYMS: NADPH2
SYNONYMS: dihydrotriphosphopyridine nucleotide
SYNONYMS: dihydrotriphosphopyridine nucleotide reduced
SYNONYMS: dihydronicotinamide adenine dinucleotide phosphate
SYNONYMS: dihydronicotinamide adenine dinucleotide phosphate reduced
SYNONYMS: NADP-reduced
SYNONYMS: NADP-red
SYNONYMS: TPNH
SYNONYMS: dihydronicotinamide adenine dinucleotide-P
SYNONYMS: NADP(H)
XREF: unificationXref26751
XREF: unificationXref26750
XREF: unificationXref26749
XREF: unificationXref26748
XREF: unificationXref26747
XREF: unificationXref26746

chemicalStructure26752
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NADPH-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="NADPH-atom2" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="NADPH-atom3" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="NADPH-atom4" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="NADPH-atom5" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="NADPH-atom6" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="NADPH-atom7" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="NADPH-atom8" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="NADPH-atom9" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="NADPH-atom10" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="NADPH-atom11" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="NADPH-atom12" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="NADPH-atom13" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="NADPH-atom14" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="NADPH-atom15" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="NADPH-atom16" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="NADPH-atom17" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="NADPH-atom18" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="NADPH-atom19" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="NADPH-atom20" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="NADPH-atom21" elementType="N" x2="7.9852" y2="-6.4411"/> <atom id="NADPH-atom22" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="NADPH-atom23" elementType="O" x2="3.6666" y2="-3.3112"/> <atom id="NADPH-atom24" elementType="O" x2="3.6641" y2="-1.6612"/> <atom id="NADPH-atom25" elementType="P" x2="3.6657" y2="-2.4862"/> <atom id="NADPH-atom26" elementType="O" x2="9.0842" y2="-1.3204"/> <atom id="NADPH-atom27" elementType="P" x2="9.9092" y2="-1.3204"/> <atom id="NADPH-atom28" elementType="O" x2="9.9092" y2="-2.1454"/> <atom id="NADPH-atom29" elementType="O" x2="10.7342" y2="-1.3204"/> <atom id="NADPH-atom30" elementType="O" x2="9.9092" y2="-0.4954"/>…

unificationXref26751
type: unificationXref
DB: CapCyc
ID: NADPH

unificationXref26750
type: unificationXref
DB: LIGAND
ID: C00005

unificationXref26749
type: unificationXref
DB: CAS
ID: 2646-71-1

unificationXref26748
type: unificationXref
DB: PubChem
ID: 5884

unificationXref26747
type: unificationXref
DB: LIGAND
ID: C00005

unificationXref26746
type: unificationXref
DB: Chebi
ID: 16474

phys-ent-participant29550
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29548
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29548
type: protein
NAME: a beta-ketoacyl-ACP
ORGANISM: bioSource20982
SYNONYMS: 3-oxoacyl-[acyl-carrier protein]
SYNONYMS: acetoacyl-ACP
SYNONYMS: CH3(CH2)xCOCH2CO-S-ACP
XREF: unificationXref29549

unificationXref29549
type: unificationXref
DB: CapCyc
ID: B-KETOACYL-ACP

unificationXref29640
type: unificationXref
DB: CapCyc
ID: 3-OXOACYL-ACP-REDUCT-RXN

phys-ent-participant29617
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29615
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29615
type: protein
NAME: BETA-KETOACYL-ACP REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref29616

unificationXref29616
type: unificationXref
DB: CapCyc
ID: SGNU199225-MONOMER

unificationXref29645
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-750

catalysis29637
type: catalysis
CONTROLLED: biochemicalReaction29633
CONTROLLER: phys-ent-participant29607
NAME: BETA-KETOACYL-ACP SYNTHASE I
XREF: unificationXref29638

biochemicalReaction29633
type: biochemicalReaction
EC-NUMBER: 2.3.1.41
LEFT: phys-ent-participant29573
LEFT: phys-ent-participant29547
NAME: 3-oxoacyl-[acyl-carrier protein] synthase
RIGHT: phys-ent-participant29581
RIGHT: phys-ent-participant29550
RIGHT: phys-ent-participant21166
XREF: unificationXref29634

phys-ent-participant29547
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29520
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29520
type: protein
NAME: malonyl-ACP
ORGANISM: bioSource20982
SYNONYMS: B1094
SYNONYMS: AcpP
SYNONYMS: malonyl-[acyl-carrier protein]
SYNONYMS: malonyl-S-ACP
SYNONYMS: malonyl-acyl-carrier-protein
XREF: unificationXref29524
XREF: unificationXref29523
XREF: unificationXref29522
XREF: unificationXref29521

unificationXref29524
type: unificationXref
DB: CapCyc
ID: MALONYL-ACP

unificationXref29523
type: unificationXref
DB: Modbase
ID: P02901

unificationXref29522
type: unificationXref
DB: LIGAND
ID: C01209

unificationXref29521
type: unificationXref
DB: UniProtKB
ID: P02901

unificationXref29634
type: unificationXref
DB: CapCyc
ID: 3-OXOACYL-ACP-SYNTH-RXN

phys-ent-participant29607
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29605
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29605
type: protein
NAME: BETA-KETOACYL-ACP SYNTHASE I
ORGANISM: bioSource20982
XREF: unificationXref29606

unificationXref29606
type: unificationXref
DB: CapCyc
ID: SGNU203714-MONOMER

unificationXref29638
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-638

catalysis29635
type: catalysis
CONTROLLED: biochemicalReaction29633
CONTROLLER: phys-ent-participant29602
NAME: BETA-KETOACYL-ACP SYNTHASE I
XREF: unificationXref29636

phys-ent-participant29602
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29600
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29600
type: protein
NAME: BETA-KETOACYL-ACP SYNTHASE I
ORGANISM: bioSource20982
XREF: unificationXref29601

unificationXref29601
type: unificationXref
DB: CapCyc
ID: SGNU204491-MONOMER

unificationXref29636
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-688

catalysis29623
type: catalysis
CONTROLLED: biochemicalReaction29618
CONTROLLER: phys-ent-participant29627
NAME: BETA-HYDROXYACYL-ACP DEHYDRATASE
XREF: unificationXref29624

biochemicalReaction29618
type: biochemicalReaction
LEFT: phys-ent-participant29612
NAME: RXN0-2144
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant29622
XREF: unificationXref29619

phys-ent-participant29612
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29610
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29610
type: protein
NAME: beta-hydroxy-cis-delta5-dodecenoyl-ACP
ORGANISM: bioSource20982
SYNONYMS: β-hydroxy-cis-δ5-dodecenoyl-ACP
XREF: unificationXref29611

unificationXref29611
type: unificationXref
DB: CapCyc
ID: BETA-HYDROXY-CIS-DELTA5-DODECENOYL-ACP

phys-ent-participant29622
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29620
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29620
type: protein
NAME: trans-delta3-cis-delta5-dodecenoyl-ACP
ORGANISM: bioSource20982
SYNONYMS: trans-δ3-cis-δ5-dodecenoyl-ACP
XREF: unificationXref29621

unificationXref29621
type: unificationXref
DB: CapCyc
ID: TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP

unificationXref29619
type: unificationXref
DB: CapCyc
ID: RXN0-2144

unificationXref29624
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-567

catalysis29613
type: catalysis
CONTROLLED: biochemicalReaction29608
CONTROLLER: phys-ent-participant29617
NAME: BETA-KETOACYL-ACP REDUCTASE
XREF: unificationXref29614

biochemicalReaction29608
type: biochemicalReaction
LEFT: phys-ent-participant29597
LEFT: phys-ent-participant26753
NAME: RXN0-2142
RIGHT: phys-ent-participant29612
RIGHT: phys-ent-participant26766
XREF: unificationXref29609

phys-ent-participant29597
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29595
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29595
type: protein
NAME: beta-keto-cis-delta5-dodecenoyl-ACP
ORGANISM: bioSource20982
SYNONYMS: β-keto-cis-δ5-dodecenoyl-ACP
XREF: unificationXref29596

unificationXref29596
type: unificationXref
DB: CapCyc
ID: BETA-KETO-CIS-DELTA5-DODECENOYL-ACP

unificationXref29609
type: unificationXref
DB: CapCyc
ID: RXN0-2142

unificationXref29614
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-751

catalysis29603
type: catalysis
CONTROLLED: biochemicalReaction29590
CONTROLLER: phys-ent-participant29607
NAME: BETA-KETOACYL-ACP SYNTHASE I
XREF: unificationXref29604

biochemicalReaction29590
type: biochemicalReaction
LEFT: phys-ent-participant29594
LEFT: phys-ent-participant29547
NAME: RXN0-2141
RIGHT: phys-ent-participant29597
RIGHT: phys-ent-participant29581
RIGHT: phys-ent-participant21166
XREF: unificationXref29591

phys-ent-participant29594
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29592
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

protein29592
type: protein
NAME: cis-delta3-decenoyl-ACP
ORGANISM: bioSource20982
SYNONYMS: B1094
SYNONYMS: AcpP
SYNONYMS: (Z)-3-decenoyl-ACP
SYNONYMS: 3,4-decenoyl-ACP
XREF: unificationXref29593

unificationXref29593
type: unificationXref
DB: CapCyc
ID: CIS-DELTA3-DECENOYL-ACP

unificationXref29591
type: unificationXref
DB: CapCyc
ID: RXN0-2141

unificationXref29604
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-639

catalysis29598
type: catalysis
CONTROLLED: biochemicalReaction29590
CONTROLLER: phys-ent-participant29602
NAME: BETA-KETOACYL-ACP SYNTHASE I
XREF: unificationXref29599

unificationXref29599
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-689

catalysis29533
type: catalysis
CONTROLLED: biochemicalReaction29518
CONTROLLER: phys-ent-participant29544
NAME: fatty acid synthase
XREF: unificationXref29534

biochemicalReaction29518
type: biochemicalReaction
LEFT: phys-ent-participant29527
LEFT: phys-ent-participant27385
LEFT: phys-ent-participant27450
NAME: RXN-8926
RIGHT: phys-ent-participant29089
RIGHT: phys-ent-participant29531
RIGHT: phys-ent-participant21436
RIGHT: phys-ent-participant29532
XREF: unificationXref29519

phys-ent-participant29527
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29520
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant27385
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27380
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27380
type: smallMolecule
MOLECULAR-WEIGHT: 837.625
NAME: isobutyryl-CoA
STRUCTURE: chemicalStructure27384
SYNONYMS: 2-methylpropanoyl-CoA
SYNONYMS: isobutyryl-coenzyme A
SYNONYMS: 2-methylpropionyl-CoA
SYNONYMS: S-(2-methylpropanoyl)-CoA
XREF: unificationXref27383
XREF: unificationXref27382
XREF: unificationXref27381

chemicalStructure27384
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ISOBUTYRYL-COA-atom1" elementType="N" x2="0.0415" y2="-0.7668"/> <atom id="ISOBUTYRYL-COA-atom2" elementType="C" x2="0.0415" y2="-0.0085"/> <atom id="ISOBUTYRYL-COA-atom3" elementType="N" x2="0.6911" y2="0.3749"/> <atom id="ISOBUTYRYL-COA-atom4" elementType="C" x2="0.6911" y2="-1.1418"/> <atom id="ISOBUTYRYL-COA-atom5" elementType="C" x2="1.3489" y2="-0.7668"/> <atom id="ISOBUTYRYL-COA-atom6" elementType="C" x2="1.3489" y2="-0.0085"/> <atom id="ISOBUTYRYL-COA-atom7" elementType="C" x2="2.6616" y2="-0.7668"/> <atom id="ISOBUTYRYL-COA-atom8" elementType="N" x2="2.0052" y2="-1.1483"/> <atom id="ISOBUTYRYL-COA-atom9" elementType="N" x2="0.689" y2="-1.8918"/> <atom id="ISOBUTYRYL-COA-atom10" elementType="N" x2="2.66" y2="-0.0085"/> <atom id="ISOBUTYRYL-COA-atom11" elementType="O" x2="1.7287" y2="0.846"/> <atom id="ISOBUTYRYL-COA-atom12" elementType="O" x2="-0.6388" y2="1.5644"/> <atom id="ISOBUTYRYL-COA-atom13" elementType="C" x2="2.3489" y2="1.2945"/> <atom id="ISOBUTYRYL-COA-atom14" elementType="C" x2="2.1218" y2="1.9991"/> <atom id="ISOBUTYRYL-COA-atom15" elementType="C" x2="1.3563" y2="1.9991"/> <atom id="ISOBUTYRYL-COA-atom16" elementType="C" x2="1.1182" y2="1.2835"/> <atom id="ISOBUTYRYL-COA-atom17" elementType="C" x2="0.4159" y2="1.0627"/> <atom id="ISOBUTYRYL-COA-atom18" elementType="P" x2="-1.8063" y2="1.5613"/> <atom id="ISOBUTYRYL-COA-atom19" elementType="O" x2="-1.801" y2="0.8031"/> <atom id="ISOBUTYRYL-COA-atom20" elementType="O" x2="-2.6021" y2="1.5651"/> <atom id="ISOBUTYRYL-COA-atom21" elementType="O" x2="-1.8073" y2="3.1488"/> <atom id="ISOBUTYRYL-COA-atom22" elementType="O" x2="-0.9381" y2="4.6835"/> <atom id="ISOBUTYRYL-COA-atom23" elementType="P" x2="-1.8021" y2="4.678"/> <atom id="ISOBUTYRYL-COA-atom24" elementType="O" x2="-2.5562" y2="4.686"/> <atom id="ISOBUTYRYL-COA-atom25" elementType="O" x2="-1.7989" y2="5.5738"/> <atom id="ISOBUTYRYL-COA-atom26" elementType="C" x2="-0.3746" y2="4.289"/> <atom id="ISOBUTYRYL-COA-atom27" elementType="C"…

unificationXref27383
type: unificationXref
DB: CapCyc
ID: ISOBUTYRYL-COA

unificationXref27382
type: unificationXref
DB: CAS
ID: 15621-60-0

unificationXref27381
type: unificationXref
DB: LIGAND
ID: C00630

phys-ent-participant27450
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20943
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 3

phys-ent-participant29089
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29086
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29086
type: smallMolecule
MOLECULAR-WEIGHT: 170.251
NAME: 8-methylnonenoate
STRUCTURE: chemicalStructure29088
SYNONYMS: 8-methyl-6-nonenoic acid
XREF: unificationXref29087

chemicalStructure29088
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-9329-atom1" elementType="C" x2="-322730.0" y2="121880.0"/> <atom id="CPD-9329-atom2" elementType="C" x2="-251280.0" y2="80630.0"/> <atom id="CPD-9329-atom3" elementType="C" x2="-179840.0" y2="121880.0"/> <atom id="CPD-9329-atom4" elementType="C" x2="-108390.0" y2="80630.0"/> <atom id="CPD-9329-atom5" elementType="C" x2="-36940.0" y2="121880.0"/> <atom id="CPD-9329-atom6" elementType="C" x2="-108390.0" y2="-1870.0"/> <atom id="CPD-9329-atom7" elementType="C" x2="-394180.0" y2="80630.0"/> <atom id="CPD-9329-atom8" elementType="C" x2="-465620.0" y2="121880.0"/> <atom id="CPD-9329-atom9" elementType="C" x2="-537070.0" y2="80630.0"/> <atom id="CPD-9329-atom10" elementType="C" x2="-536640.0" y2="-28120.0"/> <atom id="CPD-9329-atom11" elementType="O" x2="-607930.0" y2="-69660.0"/> <atom id="CPD-9329-atom12" elementType="O" x2="-465040.0" y2="-69090.0"/> <bond id="CPD-9329-bond1" atomRefs="CPD-9329-atom10 CPD-9329-atom12" order="2"/> <bond id="CPD-9329-bond2" atomRefs="CPD-9329-atom10 CPD-9329-atom11" order="1"/> <bond id="CPD-9329-bond3" atomRefs="CPD-9329-atom9 CPD-9329-atom10" order="1"/> <bond id="CPD-9329-bond4" atomRefs="CPD-9329-atom8 CPD-9329-atom9" order="1"/> <bond id="CPD-9329-bond5" atomRefs="CPD-9329-atom7 CPD-9329-atom8" order="1"/> <bond id="CPD-9329-bond6" atomRefs="CPD-9329-atom4 CPD-9329-atom6" order="1"/> <bond id="CPD-9329-bond7" atomRefs="CPD-9329-atom4 CPD-9329-atom5" order="1"/> <bond id="CPD-9329-bond8" atomRefs="CPD-9329-atom3 CPD-9329-atom4" order="1"/> <bond id="CPD-9329-bond9" atomRefs="CPD-9329-atom2 CPD-9329-atom3" order="2"/> <bond id="CPD-9329-bond10" atomRefs="CPD-9329-atom1 CPD-9329-atom2" order="1"/> <bond id="CPD-9329-bond11" atomRefs="CPD-9329-atom7 CPD-9329-atom1" order="1"/> <formula concise="C 10 H 18 O 2" formalCharge="0"/> 170.251 CC(C)C=CCCCCC(=O)O

unificationXref29087
type: unificationXref
DB: CapCyc
ID: CPD-9329

phys-ent-participant29531
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29528
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant29532
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23337
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 4

smallMolecule23337
type: smallMolecule
MOLECULAR-WEIGHT: 31.999
NAME: O2
STRUCTURE: chemicalStructure23341
SYNONYMS: oxygen
SYNONYMS: oxygen molecule
XREF: unificationXref23340
XREF: unificationXref23339
XREF: unificationXref23338

chemicalStructure23341
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OXYGEN-MOLECULE-atom1" elementType="O" x2="-1.0" y2="-1.0"/> <atom id="OXYGEN-MOLECULE-atom2" elementType="O" x2="0.9967" y2="-1.0"/> <bond id="OXYGEN-MOLECULE-bond1" atomRefs="OXYGEN-MOLECULE-atom2 OXYGEN-MOLECULE-atom1" order="2"/> <formula concise="O 2" formalCharge="0"/> 31.999 O=O O2

unificationXref23340
type: unificationXref
DB: CapCyc
ID: OXYGEN-MOLECULE

unificationXref23339
type: unificationXref
DB: CAS
ID: 7782-44-7

unificationXref23338
type: unificationXref
DB: LIGAND
ID: C00007

unificationXref29519
type: unificationXref
DB: CapCyc
ID: RXN-8926

phys-ent-participant29544
type: physicalEntityParticipant
PHYSICAL-ENTITY: complex29535
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

complex29535
type: complex
COMMENT: The fatty acid synthase is a enzyme complex isolated from the tissues of C.chinensis.
COMPONENTS: phys-ent-participant29543
COMPONENTS: phys-ent-participant29540
COMPONENTS: phys-ent-participant29539
NAME: CPLX2KO-804
ORGANISM: bioSource20982
XREF: unificationXref29536

protein29541
type: protein
NAME: Acyl-CoA
ORGANISM: bioSource20982
XREF: unificationXref29542

unificationXref29542
type: unificationXref
DB: CapCyc
ID: MONOMER2KO-803

protein29537
type: protein
NAME: FAT
ORGANISM: bioSource20982
XREF: unificationXref29538

unificationXref29538
type: unificationXref
DB: CapCyc
ID: MONOMER2KO-800

unificationXref29536
type: unificationXref
DB: CapCyc
ID: CPLX2KO-804

unificationXref29534
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-805

catalysis29499
type: catalysis
CONTROLLED: biochemicalReaction29477
CONTROLLER: phys-ent-participant29503
NAME: 2-oxoglutarate dehydrogenase complex
XREF: unificationXref29500

biochemicalReaction29477
type: biochemicalReaction
DELTA-G: -7.2
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant21436
LEFT: phys-ent-participant27218
NAME: 2OXOGLUTARATEDEH-RXN
RIGHT: phys-ent-participant21442
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant27230
SYNONYMS: 2-oxoglutarate dehydrogenation
SYNONYMS: α-ketoglutarate oxidative decarboxylation
XREF: unificationXref29478

phys-ent-participant25706
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25701
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25701
type: smallMolecule
MOLECULAR-WEIGHT: 146.099
NAME: alpha-ketoglutarate
STRUCTURE: chemicalStructure25705
SYNONYMS: ketoglutarate
SYNONYMS: α-ketoglutarate
SYNONYMS: 2-oxoglutaric acid
SYNONYMS: α-ketoglutaric acid
SYNONYMS: α-oxoglutarate
SYNONYMS: 2-oxoglutarate
SYNONYMS: 2-ketoglutaric acid
SYNONYMS: 2-ketoglutarate
SYNONYMS: 2-oxopentanedionic acid
SYNONYMS: 2-oxopentanedionate
XREF: unificationXref25704
XREF: unificationXref25703
XREF: unificationXref25702

chemicalStructure25705
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-KETOGLUTARATE-atom1" elementType="C" x2="-0.33887" y2="-0.61794"/> <atom id="2-KETOGLUTARATE-atom2" elementType="O" x2="0.99668" y2="-0.61462"/> <atom id="2-KETOGLUTARATE-atom3" elementType="C" x2="0.66777" y2="-0.42193"/> <atom id="2-KETOGLUTARATE-atom4" elementType="O" x2="0.33223" y2="-1.0"/> <atom id="2-KETOGLUTARATE-atom5" elementType="O" x2="0.66777" y2="-0.03987"/> <atom id="2-KETOGLUTARATE-atom6" elementType="C" x2="0.33223" y2="-0.61794"/> <atom id="2-KETOGLUTARATE-atom7" elementType="O" x2="-1.0" y2="-0.61462"/> <atom id="2-KETOGLUTARATE-atom8" elementType="C" x2="-0.00332" y2="-0.42193"/> <atom id="2-KETOGLUTARATE-atom9" elementType="C" x2="-0.6711" y2="-0.42193"/> <atom id="2-KETOGLUTARATE-atom10" elementType="O" x2="-0.6711" y2="-0.03987"/> <bond id="2-KETOGLUTARATE-bond1" atomRefs="2-KETOGLUTARATE-atom10 2-KETOGLUTARATE-atom9" order="2"/> <bond id="2-KETOGLUTARATE-bond2" atomRefs="2-KETOGLUTARATE-atom9 2-KETOGLUTARATE-atom1" order="1"/> <bond id="2-KETOGLUTARATE-bond3" atomRefs="2-KETOGLUTARATE-atom8 2-KETOGLUTARATE-atom6" order="1"/> <bond id="2-KETOGLUTARATE-bond4" atomRefs="2-KETOGLUTARATE-atom7 2-KETOGLUTARATE-atom9" order="1"/> <bond id="2-KETOGLUTARATE-bond5" atomRefs="2-KETOGLUTARATE-atom6 2-KETOGLUTARATE-atom3" order="1"/> <bond id="2-KETOGLUTARATE-bond6" atomRefs="2-KETOGLUTARATE-atom5 2-KETOGLUTARATE-atom3" order="2"/> <bond id="2-KETOGLUTARATE-bond7" atomRefs="2-KETOGLUTARATE-atom4 2-KETOGLUTARATE-atom6" order="2"/> <bond id="2-KETOGLUTARATE-bond8" atomRefs="2-KETOGLUTARATE-atom2 2-KETOGLUTARATE-atom3" order="1"/> <bond id="2-KETOGLUTARATE-bond9" atomRefs="2-KETOGLUTARATE-atom1 2-KETOGLUTARATE-atom8" order="1"/> <formula concise="C 5 H 6 O 5" formalCharge="0"/> 146.099 C(O)(=O)C(=O)CCC(=O)O

unificationXref25704
type: unificationXref
DB: CapCyc
ID: 2-KETOGLUTARATE

unificationXref25703
type: unificationXref
DB: CAS
ID: 328-50-7

unificationXref25702
type: unificationXref
DB: LIGAND
ID: C00026

phys-ent-participant27218
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27213
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27213
type: smallMolecule
COMMENT: Nicotinamide adenine dinucleotide (NAD) and its phosphorylated derivative, nicotinamide adenine dinucleotide phosphate (NADP) are two of the most important coenzymes in redox reactions in the cell. Generally, NAD is involved in catabolic reactions, while NADP is involved in anabolic reactions. Because of the positive charge on the nitrogen atom in the nicotinamide ring, the oxidized forms of these compounds are often depicted as NAD+ and NADP+, respectively.
MOLECULAR-WEIGHT: 664.438
NAME: NAD+
STRUCTURE: chemicalStructure27217
SYNONYMS: coenzyme I
SYNONYMS: diphosphopyridine nucleotide
SYNONYMS: diphosphopyridine nucleotide oxidized
SYNONYMS: nicotinamide adenine dinucleotide
SYNONYMS: nicotinamide adenine dinucleotide oxidized
SYNONYMS: NAD-oxidized
SYNONYMS: NAD-ox
SYNONYMS: NAD+
SYNONYMS: DPN+
SYNONYMS: DPN-ox
SYNONYMS: DPN
SYNONYMS: β-nicotinamide adenine dinucleotide
SYNONYMS: NAD
XREF: unificationXref27216
XREF: unificationXref27215
XREF: unificationXref27214

chemicalStructure27217
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NAD-atom1" elementType="N" x2="0.0" y2="-2.8535"/> <atom id="NAD-atom2" elementType="N" x2="19.3103" y2="-9.0476"/> <atom id="NAD-atom3" elementType="O" x2="1.1945" y2="-0.7847"/> <atom id="NAD-atom4" elementType="O" x2="14.843" y2="-3.8046"/> <atom id="NAD-atom5" elementType="O" x2="12.0906" y2="-3.8151"/> <atom id="NAD-atom6" elementType="O" x2="18.1466" y2="-0.4952"/> <atom id="NAD-atom7" elementType="O" x2="8.7056" y2="0.0"/> <atom id="NAD-atom8" elementType="O" x2="21.1476" y2="-0.487"/> <atom id="NAD-atom9" elementType="O" x2="5.7049" y2="0.0"/> <atom id="NAD-atom10" elementType="O" x2="14.8388" y2="-1.0612"/> <atom id="NAD-atom11" elementType="O" x2="12.0864" y2="-1.0567"/> <atom id="NAD-atom12" elementType="C" x2="3.5833" y2="-4.9224"/> <atom id="NAD-atom13" elementType="C" x2="2.3888" y2="-4.2328"/> <atom id="NAD-atom14" elementType="C" x2="18.1262" y2="-5.5954"/> <atom id="NAD-atom15" elementType="C" x2="4.7778" y2="-4.2328"/> <atom id="NAD-atom16" elementType="C" x2="22.6415" y2="-6.2818"/> <atom id="NAD-atom17" elementType="C" x2="3.5833" y2="-2.1639"/> <atom id="NAD-atom18" elementType="C" x2="17.2376" y2="-3.3435"/> <atom id="NAD-atom19" elementType="C" x2="9.513" y2="-3.1212"/> <atom id="NAD-atom20" elementType="N" x2="18.1262" y2="-6.9825"/> <atom id="NAD-atom21" elementType="N" x2="19.3141" y2="-4.8943"/> <atom id="NAD-atom22" elementType="N" x2="21.8375" y2="-7.409"/> <atom id="NAD-atom23" elementType="O" x2="16.2147" y2="-2.4299"/> <atom id="NAD-atom24" elementType="O" x2="10.7099" y2="-2.4359"/> <atom id="NAD-atom25" elementType="O" x2="19.6425" y2="-3.7132"/> <atom id="NAD-atom26" elementType="O" x2="7.2052" y2="-3.2381"/> <atom id="NAD-atom27" elementType="O" x2="13.4698" y2="-2.4329"/> <atom id="NAD-atom28" elementType="C" x2="1.1945" y2="-2.1639"/> <atom id="NAD-atom29" elementType="C" x2="19.3141" y2="-7.6684"/> <atom id="NAD-atom30" elementType="C" x2="2.3888" y2="-2.8535"/> <atom id="NAD-atom31" elementType="C" x2="20.5173" y2="-…

unificationXref27216
type: unificationXref
DB: CapCyc
ID: NAD

unificationXref27215
type: unificationXref
DB: CAS
ID: 53-84-9

unificationXref27214
type: unificationXref
DB: LIGAND
ID: C00003

phys-ent-participant21442
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21437
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21437
type: smallMolecule
MOLECULAR-WEIGHT: 867.608
NAME: succinyl-CoA
STRUCTURE: chemicalStructure21441
SYNONYMS: suc-coa
SYNONYMS: succ-coenzyme-A
SYNONYMS: succ-S-coenzyme-A
SYNONYMS: succinyl-S-coenzyme-A
SYNONYMS: succ-S-CoA
SYNONYMS: succinylcoenzyme-A
SYNONYMS: succ-CoA
SYNONYMS: suc-co-A
SYNONYMS: succinyl-S-CoA
XREF: unificationXref21440
XREF: unificationXref21439
XREF: unificationXref21438

chemicalStructure21441
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SUC-COA-atom1" elementType="C" x2="0.88294" y2="-0.23077"/> <atom id="SUC-COA-atom2" elementType="N" x2="-1.0" y2="-0.14381"/> <atom id="SUC-COA-atom3" elementType="C" x2="0.8194" y2="-0.35452"/> <atom id="SUC-COA-atom4" elementType="C" x2="-0.60535" y2="0.11371"/> <atom id="SUC-COA-atom5" elementType="N" x2="0.60535" y2="0.05017"/> <atom id="SUC-COA-atom6" elementType="O" x2="-0.86622" y2="0.11371"/> <atom id="SUC-COA-atom7" elementType="P" x2="0.8194" y2="-0.82274"/> <atom id="SUC-COA-atom8" elementType="C" x2="-0.86622" y2="-0.06355"/> <atom id="SUC-COA-atom9" elementType="O" x2="0.8194" y2="-0.46154"/> <atom id="SUC-COA-atom10" elementType="C" x2="0.98662" y2="0.21405"/> <atom id="SUC-COA-atom11" elementType="O" x2="0.8194" y2="-1.0"/> <atom id="SUC-COA-atom12" elementType="N" x2="0.45151" y2="0.29097"/> <atom id="SUC-COA-atom13" elementType="C" x2="0.22408" y2="-0.57525"/> <atom id="SUC-COA-atom14" elementType="O" x2="0.71572" y2="-0.14047"/> <atom id="SUC-COA-atom15" elementType="O" x2="-0.66221" y2="-0.41472"/> <atom id="SUC-COA-atom16" elementType="N" x2="-0.52843" y2="-0.6689"/> <atom id="SUC-COA-atom17" elementType="O" x2="-0.31773" y2="-0.04013"/> <atom id="SUC-COA-atom18" elementType="C" x2="0.08696" y2="-0.67559"/> <atom id="SUC-COA-atom19" elementType="O" x2="0.48829" y2="-0.39799"/> <atom id="SUC-COA-atom20" elementType="C" x2="0.48829" y2="-0.57525"/> <atom id="SUC-COA-atom21" elementType="O" x2="0.21405" y2="0.13712"/> <atom id="SUC-COA-atom22" elementType="C" x2="-0.66221" y2="-0.59197"/> <atom id="SUC-COA-atom23" elementType="H" x2="0.8194" y2="-0.24749"/> <atom id="SUC-COA-atom24" elementType="C" x2="0.58863" y2="0.37793"/> <atom id="SUC-COA-atom25" elementType="O" x2="0.21405" y2="-0.21739"/> <atom id="SUC-COA-atom26" elementType="C" x2="-0.60535" y2="-0.06355"/> <atom id="SUC-COA-atom27" elementType="N" x2="0.88294" y2="0.05686"/> <atom id="SUC-COA-atom28" elementType="C" x2="-0.60535" y2="-0.2408"/> <atom id="SUC-COA-atom29" elementT…

unificationXref21440
type: unificationXref
DB: CapCyc
ID: SUC-COA

unificationXref21439
type: unificationXref
DB: CAS
ID: 604-98-8

unificationXref21438
type: unificationXref
DB: LIGAND
ID: C00091

phys-ent-participant27230
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27225
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27225
type: smallMolecule
MOLECULAR-WEIGHT: 665.446
NAME: NADH
STRUCTURE: chemicalStructure27229
SYNONYMS: NADH2
SYNONYMS: dihydrodiphosphopyridine nucleotide
SYNONYMS: diphosphopyridine nucleotide reduced
SYNONYMS: dihydronicotinamide adenine dinucleotide
SYNONYMS: nicotinamide adenine dinucleotide reduced
SYNONYMS: NAD-reduced
SYNONYMS: NADH+H+
SYNONYMS: DPNH
XREF: unificationXref27228
XREF: unificationXref27227
XREF: unificationXref27226

chemicalStructure27229
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NADH-atom1" elementType="C" x2="0.34285715" y2="-0.7542857"/> <atom id="NADH-atom2" elementType="C" x2="0.92" y2="-0.45142856"/> <atom id="NADH-atom3" elementType="H" x2="0.37142858" y2="-0.89428574"/> <atom id="NADH-atom4" elementType="O" x2="0.08285714" y2="-0.64"/> <atom id="NADH-atom5" elementType="O" x2="0.08285714" y2="-0.8657143"/> <atom id="NADH-atom6" elementType="C" x2="0.42857143" y2="-0.93142855"/> <atom id="NADH-atom7" elementType="C" x2="-0.5914286" y2="-0.36"/> <atom id="NADH-atom8" elementType="C" x2="-0.78571427" y2="-0.4342857"/> <atom id="NADH-atom9" elementType="H" x2="-0.48857144" y2="-0.70285714"/> <atom id="NADH-atom10" elementType="H" x2="0.7" y2="-0.34285715"/> <atom id="NADH-atom11" elementType="O" x2="0.42857143" y2="-1.0"/> <atom id="NADH-atom12" elementType="C" x2="0.52" y2="-0.46285716"/> <atom id="NADH-atom13" elementType="C" x2="-1.0" y2="-0.4342857"/> <atom id="NADH-atom14" elementType="H" x2="0.42857143" y2="-0.86285716"/> <atom id="NADH-atom15" elementType="H" x2="-0.68" y2="-0.7542857"/> <atom id="NADH-atom16" elementType="H" x2="0.6028572" y2="-0.34571427"/> <atom id="NADH-atom17" elementType="C" x2="-0.42285714" y2="-0.68285716"/> <atom id="NADH-atom18" elementType="C" x2="0.7714286" y2="-0.45142856"/> <atom id="NADH-atom19" elementType="H" x2="0.6457143" y2="-0.89428574"/> <atom id="NADH-atom20" elementType="O" x2="-0.5542857" y2="-0.61142856"/> <atom id="NADH-atom21" elementType="C" x2="0.6457143" y2="-0.82857144"/> <atom id="NADH-atom22" elementType="O" x2="-0.48857144" y2="-0.8428571"/> <atom id="NADH-atom23" elementType="C" x2="0.37142858" y2="-0.82857144"/> <atom id="NADH-atom24" elementType="C" x2="0.52" y2="-0.6085714"/> <atom id="NADH-atom25" elementType="C" x2="-0.48857144" y2="-0.77428573"/> <atom id="NADH-atom26" elementType="C" x2="-0.61714286" y2="-0.77428573"/> <atom id="NADH-atom27" elementType="O" x2="0.5" y2="-0.7457143"/> <atom id="NADH-atom28" elementType="N" x2="-0.8971428" y2="-0.13142857"/> <atom…

unificationXref27228
type: unificationXref
DB: CapCyc
ID: NADH

unificationXref27227
type: unificationXref
DB: LIGAND
ID: C00004

unificationXref27226
type: unificationXref
DB: CAS
ID: 53-84-9

unificationXref29478
type: unificationXref
DB: CapCyc
ID: 2OXOGLUTARATEDEH-RXN

phys-ent-participant29503
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29501
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29501
type: protein
NAME: 2-oxoglutarate dehydrogenase complex
ORGANISM: bioSource20982
XREF: unificationXref29502

unificationXref29502
type: unificationXref
DB: CapCyc
ID: SGNU196781-MONOMER

unificationXref29500
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-103

catalysis29494
type: catalysis
CONTROLLED: biochemicalReaction29477
CONTROLLER: phys-ent-participant29498
NAME: 2-oxoglutarate dehydrogenase complex
XREF: unificationXref29495

phys-ent-participant29498
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29496
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29496
type: protein
NAME: 2-oxoglutarate dehydrogenase complex
ORGANISM: bioSource20982
XREF: unificationXref29497

unificationXref29497
type: unificationXref
DB: CapCyc
ID: SGNU196789-MONOMER

unificationXref29495
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-105

catalysis29489
type: catalysis
CONTROLLED: biochemicalReaction29477
CONTROLLER: phys-ent-participant29493
NAME: 2-oxoglutarate dehydrogenase complex
XREF: unificationXref29490

phys-ent-participant29493
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29491
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29491
type: protein
NAME: 2-oxoglutarate dehydrogenase complex
ORGANISM: bioSource20982
XREF: unificationXref29492

unificationXref29492
type: unificationXref
DB: CapCyc
ID: SGNU198935-MONOMER

unificationXref29490
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-337

catalysis29484
type: catalysis
CONTROLLED: biochemicalReaction29477
CONTROLLER: phys-ent-participant29488
NAME: 2-oxoglutarate dehydrogenase complex
XREF: unificationXref29485

phys-ent-participant29488
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29486
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29486
type: protein
NAME: 2-oxoglutarate dehydrogenase complex
ORGANISM: bioSource20982
XREF: unificationXref29487

unificationXref29487
type: unificationXref
DB: CapCyc
ID: SGNU203666-MONOMER

unificationXref29485
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-630

catalysis29479
type: catalysis
CONTROLLED: biochemicalReaction29477
CONTROLLER: phys-ent-participant29483
NAME: 2-oxoglutarate dehydrogenase complex
XREF: unificationXref29480

phys-ent-participant29483
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29481
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29481
type: protein
NAME: 2-oxoglutarate dehydrogenase complex
ORGANISM: bioSource20982
XREF: unificationXref29482

unificationXref29482
type: unificationXref
DB: CapCyc
ID: SGNU205043-MONOMER

unificationXref29480
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-712

catalysis29472
type: catalysis
CONTROLLED: biochemicalReaction29460
CONTROLLER: phys-ent-participant29476
NAME: 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT
XREF: unificationXref29473

biochemicalReaction29460
type: biochemicalReaction
EC-NUMBER: 4.2.1.33
LEFT: phys-ent-participant26675
NAME: 3-isopropylmalate dehydratase
RIGHT: phys-ent-participant28912
SYNONYMS: α-IPM isomerase
SYNONYMS: Isopropylmalate isomerase
XREF: unificationXref29461

phys-ent-participant26675
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26671
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26671
type: smallMolecule
MOLECULAR-WEIGHT: 176.169
NAME: 3-isopropylmalate
STRUCTURE: chemicalStructure26674
SYNONYMS: 3-hydroxy-4-methyl-3-carboxypentanoate
SYNONYMS: 3-carboxy-3-hydroxy-4-methylpentanoate
SYNONYMS: 3-carboxy-3-hydroxy-isocaproate
SYNONYMS: α-isopropylmalate
XREF: unificationXref26673
XREF: unificationXref26672

chemicalStructure26674
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom1" elementType="O" x2="-0.19934" y2="-0.77265"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom2" elementType="O" x2="0.11038" y2="0.46952"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom3" elementType="C" x2="-0.19934" y2="-0.31466"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom4" elementType="O" x2="0.59802" y2="0.14333"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom5" elementType="C" x2="0.59802" y2="-0.31466"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom6" elementType="C" x2="0.19934" y2="-0.54201"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom7" elementType="O" x2="0.99671" y2="-0.54201"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom8" elementType="C" x2="-0.60132" y2="-0.54201"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom9" elementType="C" x2="-0.19934" y2="0.13015"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom10" elementType="C" x2="-0.60132" y2="-1.0"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom11" elementType="C" x2="-1.0" y2="-0.31137"/> <atom id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom12" elementType="O" x2="-0.55519" y2="0.4168"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond1" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom12 3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom9" order="2"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond2" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom11 3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom8" order="1"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond3" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom10 3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom8" order="1"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond4" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom9 3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom3" order="1"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond5" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom8 3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom3" order="1"/> <bond id="3-CARBOXY-3-HYDROXY-ISOCAPROATE-bond6" atomRefs="3-CARBOXY-3-HYDROXY-ISOCAPROATE-atom7 3-CARBOXY-3-HYDROXY-ISOCAPROATE-ato…

unificationXref26673
type: unificationXref
DB: CapCyc
ID: 3-CARBOXY-3-HYDROXY-ISOCAPROATE

unificationXref26672
type: unificationXref
DB: LIGAND
ID: C02504

phys-ent-participant28912
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28908
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28908
type: smallMolecule
MOLECULAR-WEIGHT: 176.169
NAME: 2-isopropylmalate
STRUCTURE: chemicalStructure28911
SYNONYMS: 2-D-threo-hydroxy-3-carboxy-isocaproate
SYNONYMS: 3-carboxy-2-hydroxy-4-methylpentanoate
SYNONYMS: β-isopropylmalate
XREF: unificationXref28910
XREF: unificationXref28909

chemicalStructure28911
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom1" elementType="O" x2="0.13667" y2="0.44"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom2" elementType="O" x2="0.99667" y2="-0.54"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom3" elementType="C" x2="-0.20333" y2="-0.31333"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom4" elementType="O" x2="0.60333" y2="0.14"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom5" elementType="C" x2="0.60333" y2="-0.31333"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom6" elementType="C" x2="-0.20333" y2="0.13667"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom7" elementType="O" x2="0.19667" y2="-1.0"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom8" elementType="C" x2="-0.61" y2="-0.54667"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom9" elementType="C" x2="0.19667" y2="-0.54667"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom10" elementType="C" x2="-1.0" y2="-0.32"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom11" elementType="C" x2="-0.61" y2="-1.0"/> <atom id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom12" elementType="O" x2="-0.55667" y2="0.42333"/> <bond id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-bond1" atomRefs="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom12 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom6" order="2"/> <bond id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-bond2" atomRefs="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom11 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom8" order="1"/> <bond id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-bond3" atomRefs="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom10 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom8" order="1"/> <bond id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-bond4" atomRefs="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom9 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-atom3" order="1"/> <bond id="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-bond5" atomRefs="2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE-ato…

unificationXref28910
type: unificationXref
DB: CapCyc
ID: 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE

unificationXref28909
type: unificationXref
DB: LIGAND
ID: C04411

unificationXref29461
type: unificationXref
DB: CapCyc
ID: 3-ISOPROPYLMALISOM-RXN

phys-ent-participant29476
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29474
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29474
type: protein
NAME: 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT
ORGANISM: bioSource20982
XREF: unificationXref29475

unificationXref29475
type: unificationXref
DB: CapCyc
ID: SGNU196668-MONOMER

unificationXref29473
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-83

catalysis29467
type: catalysis
CONTROLLED: biochemicalReaction29460
CONTROLLER: phys-ent-participant29471
NAME: 3-ISOPROPYLMALATE DEHYDRATASE
XREF: unificationXref29468

phys-ent-participant29471
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29469
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29469
type: protein
NAME: 3-ISOPROPYLMALATE DEHYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref29470

unificationXref29470
type: unificationXref
DB: CapCyc
ID: SGNU197897-MONOMER

unificationXref29468
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-238

catalysis29462
type: catalysis
CONTROLLED: biochemicalReaction29460
CONTROLLER: phys-ent-participant29466
NAME: 3-ISOPROPYLMALATE DEHYDRATASE
XREF: unificationXref29463

phys-ent-participant29466
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29464
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29464
type: protein
NAME: 3-ISOPROPYLMALATE DEHYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref29465

unificationXref29465
type: unificationXref
DB: CapCyc
ID: SGNU200494-MONOMER

unificationXref29463
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-425

catalysis29415
type: catalysis
CONTROLLED: biochemicalReaction29411
CONTROLLER: phys-ent-participant26189
NAME: CYSTEINE SYNTHASE
XREF: unificationXref29416

biochemicalReaction29411
type: biochemicalReaction
LEFT: phys-ent-participant22612
LEFT: phys-ent-participant21049
LEFT: phys-ent-participant26174
NAME: CYSSYNMULTI-RXN
RIGHT: phys-ent-participant21356
RIGHT: phys-ent-participant21436
RIGHT: phys-ent-participant21566
XREF: unificationXref29412

phys-ent-participant22612
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22607
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22607
type: smallMolecule
MOLECULAR-WEIGHT: 105.093
NAME: L-serine
STRUCTURE: chemicalStructure22611
SYNONYMS: S
SYNONYMS: serine
SYNONYMS: ser
SYNONYMS: L-ser
XREF: unificationXref22610
XREF: unificationXref22609
XREF: unificationXref22608

chemicalStructure22611
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SER-atom1" elementType="H" x2="-0.00167" y2="0.26878"/> <atom id="SER-atom2" elementType="C" x2="0.67947" y2="-0.36561"/> <atom id="SER-atom3" elementType="C" x2="-0.66945" y2="-0.36561"/> <atom id="SER-atom4" elementType="N" x2="-0.00167" y2="-1.0"/> <atom id="SER-atom5" elementType="C" x2="-0.00167" y2="-0.36561"/> <atom id="SER-atom6" elementType="O" x2="-1.0" y2="0.17529"/> <atom id="SER-atom7" elementType="O" x2="0.99332" y2="0.18531"/> <atom id="SER-atom8" elementType="O" x2="0.99666" y2="-0.91319"/> <bond id="SER-bond1" atomRefs="SER-atom8 SER-atom2" order="1"/> <bond id="SER-bond2" atomRefs="SER-atom7 SER-atom2" order="2"/> <bond id="SER-bond3" atomRefs="SER-atom6 SER-atom3" order="1"/> <bond id="SER-bond4" atomRefs="SER-atom5 SER-atom1" order="1"/> <bond id="SER-bond5" atomRefs="SER-atom5 SER-atom4" order="1"/> <bond id="SER-bond6" atomRefs="SER-atom5 SER-atom2" order="1"/> <bond id="SER-bond7" atomRefs="SER-atom3 SER-atom5" order="1"/> <formula concise="C 3 H 7 N 1 O 3" formalCharge="0"/> 105.093 C(=O)(O)[CH](N)CO

unificationXref22610
type: unificationXref
DB: CapCyc
ID: SER

unificationXref22609
type: unificationXref
DB: CAS
ID: 56-45-1

unificationXref22608
type: unificationXref
DB: LIGAND
ID: C00065

phys-ent-participant26174
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26169
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26169
type: smallMolecule
MOLECULAR-WEIGHT: 34.076
NAME: H2S
STRUCTURE: chemicalStructure26173
SYNONYMS: hydrogen sulfide
XREF: unificationXref26172
XREF: unificationXref26171
XREF: unificationXref26170

chemicalStructure26173
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HS-atom1" elementType="S" x2="-1.0" y2="-1.0"/> <atom id="HS-atom2" elementType="H" x2="0.99516904" y2="-1.0"/> <atom id="HS-atom3" elementType="H" x2="-1.0" y2="0.99516904"/> <bond id="HS-bond1" atomRefs="HS-atom3 HS-atom1" order="1"/> <bond id="HS-bond2" atomRefs="HS-atom2 HS-atom1" order="1"/> <formula concise="H 2 S 1" formalCharge="0"/> 34.076 [SH2]

unificationXref26172
type: unificationXref
DB: CapCyc
ID: HS

unificationXref26171
type: unificationXref
DB: LIGAND
ID: C00283

unificationXref26170
type: unificationXref
DB: CAS
ID: 06/04/7783

phys-ent-participant21356
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21350
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21350
type: smallMolecule
MOLECULAR-WEIGHT: 121.154
NAME: L-cysteine
STRUCTURE: chemicalStructure21355
SYNONYMS: C
SYNONYMS: carbocysteine
SYNONYMS: cysteine
SYNONYMS: Cys
XREF: unificationXref21354
XREF: unificationXref21353
XREF: unificationXref21352
XREF: unificationXref21351

chemicalStructure21355
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CYS-atom1" elementType="N" x2="2.4291" y2="-3.4861"/> <atom id="CYS-atom2" elementType="O" x2="3.6637" y2="0.0"/> <atom id="CYS-atom3" elementType="O" x2="4.8902" y2="-2.082"/> <atom id="CYS-atom4" elementType="S" x2="0.0" y2="-2.082"/> <atom id="CYS-atom5" elementType="C" x2="1.2265" y2="-1.4041"/> <atom id="CYS-atom6" elementType="C" x2="3.6637" y2="-1.4041"/> <atom id="CYS-atom7" elementType="C" x2="2.4291" y2="-2.082"/> <bond id="CYS-bond1" atomRefs="CYS-atom6 CYS-atom7" order="1"/> <bond id="CYS-bond2" atomRefs="CYS-atom5 CYS-atom7" order="1"/> <bond id="CYS-bond3" atomRefs="CYS-atom4 CYS-atom5" order="1"/> <bond id="CYS-bond4" atomRefs="CYS-atom3 CYS-atom6" order="1"/> <bond id="CYS-bond5" atomRefs="CYS-atom2 CYS-atom6" order="2"/> <bond id="CYS-bond6" atomRefs="CYS-atom7 CYS-atom1" order="1"/> <formula concise="C 3 H 7 N 1 O 2 S 1" formalCharge="0"/> 121.154 C(S)C(N)C(O)=O

unificationXref21354
type: unificationXref
DB: CapCyc
ID: CYS

unificationXref21353
type: unificationXref
DB: CAS
ID: 52-90-4

unificationXref21352
type: unificationXref
DB: CAS
ID: 4371-52-2

unificationXref21351
type: unificationXref
DB: LIGAND
ID: C00097

phys-ent-participant21566
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21559
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21559
type: smallMolecule
MOLECULAR-WEIGHT: 59.044
NAME: acetate
STRUCTURE: chemicalStructure21565
SYNONYMS: acet
SYNONYMS: acetic acid
SYNONYMS: ethanoic acid
XREF: unificationXref21564
XREF: unificationXref21563
XREF: unificationXref21562
XREF: unificationXref21561
XREF: unificationXref21560

chemicalStructure21565
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACET-atom1" elementType="C" x2="0.1505" y2="0.0"/> <atom id="ACET-atom2" elementType="C" x2="0.71906" y2="-1.0"/> <atom id="ACET-atom3" elementType="O" x2="0.7291" y2="0.99666" formalCharge="-1"/> <atom id="ACET-atom4" elementType="O" x2="-1.0" y2="0.0"/> <bond id="ACET-bond1" atomRefs="ACET-atom4 ACET-atom1" order="2"/> <bond id="ACET-bond2" atomRefs="ACET-atom3 ACET-atom1" order="1"/> <bond id="ACET-bond3" atomRefs="ACET-atom2 ACET-atom1" order="1"/> <formula concise="C 2 H 3 O 2" formalCharge="-1"/> 59.044 C([O-])(=O)C

unificationXref21564
type: unificationXref
DB: CapCyc
ID: ACET

unificationXref21563
type: unificationXref
DB: CAS
ID: 71-50-1

unificationXref21562
type: unificationXref
DB: LIGAND
ID: c00033

unificationXref21561
type: unificationXref
DB: LIGAND
ID: C00033

unificationXref21560
type: unificationXref
DB: CAS
ID: 64-19-7

unificationXref29412
type: unificationXref
DB: CapCyc
ID: CYSSYNMULTI-RXN

phys-ent-participant26189
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26187
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26187
type: protein
NAME: CYSTEINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26188

unificationXref26188
type: unificationXref
DB: CapCyc
ID: SGNU198743-MONOMER

unificationXref29416
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-327

catalysis29413
type: catalysis
CONTROLLED: biochemicalReaction29411
CONTROLLER: phys-ent-participant26179
NAME: CYSTEINE SYNTHASE
XREF: unificationXref29414

phys-ent-participant26179
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26177
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26177
type: protein
NAME: CYSTEINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26178

unificationXref26178
type: unificationXref
DB: CapCyc
ID: SGNU202260-MONOMER

unificationXref29414
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-559

catalysis29403
type: catalysis
CONTROLLED: biochemicalReaction29389
CONTROLLER: phys-ent-participant24794
NAME: DIENELACTONE HYDROLASE
XREF: unificationXref29404

biochemicalReaction29389
type: biochemicalReaction
LEFT: phys-ent-participant29395
LEFT: phys-ent-participant20951
NAME: DIENELACHYDRO-RXN
RIGHT: phys-ent-participant29400
XREF: unificationXref29390

phys-ent-participant29395
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29391
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29391
type: smallMolecule
MOLECULAR-WEIGHT: 174.54
NAME: 2-chloro-trans-dienelactone
STRUCTURE: chemicalStructure29394
SYNONYMS: 2<l>trans</l>-2-Chlorodienelactone
XREF: unificationXref29393
XREF: unificationXref29392

chemicalStructure29394
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-CHLORO-TRANS-DIENELACTONE-atom1" elementType="O" x2="0.5224719" y2="-0.19101125"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom2" elementType="O" x2="0.5505618" y2="0.6235955"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom3" elementType="C" x2="0.04494381" y2="0.505618"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom4" elementType="C" x2="-1.0" y2="0.505618"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom5" elementType="C" x2="-1.0" y2="-0.08988762"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom6" elementType="C" x2="0.04494381" y2="-0.08988762"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom7" elementType="O" x2="-0.4494382" y2="-0.08426964"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom8" elementType="O" x2="0.26966298" y2="0.994382"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom9" elementType="C" x2="-0.4775281" y2="-0.3932584"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom10" elementType="CL" x2="-0.4775281" y2="-1.0"/> <atom id="2-CHLORO-TRANS-DIENELACTONE-atom11" elementType="C" x2="-0.4775281" y2="0.8089888"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond1" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom11 2-CHLORO-TRANS-DIENELACTONE-atom4" order="2"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond2" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom11 2-CHLORO-TRANS-DIENELACTONE-atom3" order="1"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond3" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom9 2-CHLORO-TRANS-DIENELACTONE-atom10" order="1"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond4" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom6 2-CHLORO-TRANS-DIENELACTONE-atom7" order="1"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond5" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom6 2-CHLORO-TRANS-DIENELACTONE-atom9" order="1"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond6" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom6 2-CHLORO-TRANS-DIENELACTONE-atom1" order="2"/> <bond id="2-CHLORO-TRANS-DIENELACTONE-bond7" atomRefs="2-CHLORO-TRANS-DIENELACTONE-atom5 2-CHLORO-TRANS-DIENELACTONE-atom9" order="2"/> <bond id="2-CHLORO-TR…

unificationXref29393
type: unificationXref
DB: CapCyc
ID: 2-CHLORO-TRANS-DIENELACTONE

unificationXref29392
type: unificationXref
DB: UMBBD
ID: c0291

phys-ent-participant29400
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29396
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29396
type: smallMolecule
MOLECULAR-WEIGHT: 191.548
NAME: 2-chloromaleylacetate
STRUCTURE: chemicalStructure29399
XREF: unificationXref29398
XREF: unificationXref29397

chemicalStructure29399
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-CHLOROMALEYLACETATE-atom1" elementType="CL" x2="-0.5463414" y2="-1.0"/> <atom id="2-CHLOROMALEYLACETATE-atom2" elementType="O" x2="0.32195127" y2="-0.297561"/> <atom id="2-CHLOROMALEYLACETATE-atom3" elementType="O" x2="0.3463415" y2="0.40975606"/> <atom id="2-CHLOROMALEYLACETATE-atom4" elementType="C" x2="-0.0926829" y2="0.30731702"/> <atom id="2-CHLOROMALEYLACETATE-atom5" elementType="C" x2="-1.0" y2="0.30731702"/> <atom id="2-CHLOROMALEYLACETATE-atom6" elementType="C" x2="-1.0" y2="-0.20975608"/> <atom id="2-CHLOROMALEYLACETATE-atom7" elementType="C" x2="-0.0926829" y2="-0.20975608"/> <atom id="2-CHLOROMALEYLACETATE-atom8" elementType="O" x2="0.112195134" y2="-0.6195122"/> <atom id="2-CHLOROMALEYLACETATE-atom9" elementType="O" x2="0.102439046" y2="0.73170733"/> <atom id="2-CHLOROMALEYLACETATE-atom10" elementType="C" x2="-0.5463414" y2="-0.47317076"/> <atom id="2-CHLOROMALEYLACETATE-atom11" elementType="C" x2="-0.5463414" y2="0.57073176"/> <atom id="2-CHLOROMALEYLACETATE-atom12" elementType="O" x2="-0.5414634" y2="0.99512196"/> <bond id="2-CHLOROMALEYLACETATE-bond1" atomRefs="2-CHLOROMALEYLACETATE-atom11 2-CHLOROMALEYLACETATE-atom12" order="2"/> <bond id="2-CHLOROMALEYLACETATE-bond2" atomRefs="2-CHLOROMALEYLACETATE-atom11 2-CHLOROMALEYLACETATE-atom4" order="1"/> <bond id="2-CHLOROMALEYLACETATE-bond3" atomRefs="2-CHLOROMALEYLACETATE-atom11 2-CHLOROMALEYLACETATE-atom5" order="2"/> <bond id="2-CHLOROMALEYLACETATE-bond4" atomRefs="2-CHLOROMALEYLACETATE-atom10 2-CHLOROMALEYLACETATE-atom1" order="1"/> <bond id="2-CHLOROMALEYLACETATE-bond5" atomRefs="2-CHLOROMALEYLACETATE-atom7 2-CHLOROMALEYLACETATE-atom2" order="2"/> <bond id="2-CHLOROMALEYLACETATE-bond6" atomRefs="2-CHLOROMALEYLACETATE-atom7 2-CHLOROMALEYLACETATE-atom10" order="1"/> <bond id="2-CHLOROMALEYLACETATE-bond7" atomRefs="2-CHLOROMALEYLACETATE-atom7 2-CHLOROMALEYLACETATE-atom8" order="1"/> <bond id="2-CHLOROMALEYLACETATE-bond8" atomRefs="2-CHLOROMALEYLACETATE-atom6 2-CHLOROMALEYLACETATE-atom10" orde…

unificationXref29398
type: unificationXref
DB: CapCyc
ID: 2-CHLOROMALEYLACETATE

unificationXref29397
type: unificationXref
DB: UMBBD
ID: c0098

unificationXref29390
type: unificationXref
DB: CapCyc
ID: DIENELACHYDRO-RXN

phys-ent-participant24794
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24792
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24792
type: protein
NAME: DIENELACTONE HYDROLASE
ORGANISM: bioSource20982
XREF: unificationXref24793

unificationXref24793
type: unificationXref
DB: CapCyc
ID: SGNU196669-MONOMER

unificationXref29404
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-86

catalysis29401
type: catalysis
CONTROLLED: biochemicalReaction29389
CONTROLLER: phys-ent-participant24789
NAME: DIENELACTONE HYDROLASE
XREF: unificationXref29402

phys-ent-participant24789
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24787
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24787
type: protein
NAME: DIENELACTONE HYDROLASE
ORGANISM: bioSource20982
XREF: unificationXref24788

unificationXref24788
type: unificationXref
DB: CapCyc
ID: SGNU199128-MONOMER

unificationXref29402
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-745

catalysis29369
type: catalysis
CONTROLLED: biochemicalReaction29367
CONTROLLER: phys-ent-participant29373
NAME: glycine decarboxylase
XREF: unificationXref29370

biochemicalReaction29367
type: biochemicalReaction
LEFT: phys-ent-participant21192
LEFT: phys-ent-participant21212
LEFT: phys-ent-participant27218
NAME: GCVMULTI-RXN
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant26970
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant27230
XREF: unificationXref29368

unificationXref29368
type: unificationXref
DB: CapCyc
ID: GCVMULTI-RXN

unificationXref29370
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-188

catalysis29357
type: catalysis
CONTROLLED: biochemicalReaction29348
CONTROLLER: phys-ent-participant27300
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref29358

biochemicalReaction29348
type: biochemicalReaction
EC-NUMBER: 1.5.99.8
LEFT: phys-ent-participant29354
LEFT: phys-ent-participant27278
NAME: Proline dehydrogenase
RIGHT: phys-ent-participant27318
RIGHT: phys-ent-participant27290
XREF: unificationXref29349

phys-ent-participant29354
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29350
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29350
type: smallMolecule
MOLECULAR-WEIGHT: 131.131
NAME: L-4-hydroxy-proline
STRUCTURE: chemicalStructure29353
SYNONYMS: hydroxy-L-proline
SYNONYMS: L-4-hydroxyproline
SYNONYMS: oxyproline
SYNONYMS: 4-hydroxyproline
SYNONYMS: cis-4-hydroxyproline
SYNONYMS: OH-pro
SYNONYMS: hydroxyproline
XREF: unificationXref29352
XREF: unificationXref29351

chemicalStructure29353
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-4-HYDROXY-PROLINE-atom1" elementType="O" x2="1.8344" y2="-1.0153"/> <atom id="L-4-HYDROXY-PROLINE-atom2" elementType="O" x2="-1.7818" y2="0.9216"/> <atom id="L-4-HYDROXY-PROLINE-atom3" elementType="N" x2="-0.4008" y2="-0.869"/> <atom id="L-4-HYDROXY-PROLINE-atom4" elementType="C" x2="-1.1616" y2="-0.3774"/> <atom id="L-4-HYDROXY-PROLINE-atom5" elementType="C" x2="0.3482" y2="0.3833"/> <atom id="L-4-HYDROXY-PROLINE-atom6" elementType="C" x2="0.3482" y2="-0.3774"/> <atom id="L-4-HYDROXY-PROLINE-atom7" elementType="C" x2="-1.1616" y2="0.3833"/> <atom id="L-4-HYDROXY-PROLINE-atom8" elementType="C" x2="1.0094" y2="-1.0153"/> <atom id="L-4-HYDROXY-PROLINE-atom9" elementType="O" x2="1.0094" y2="-1.8403"/> <bond id="L-4-HYDROXY-PROLINE-bond1" atomRefs="L-4-HYDROXY-PROLINE-atom9 L-4-HYDROXY-PROLINE-atom8" order="2"/> <bond id="L-4-HYDROXY-PROLINE-bond2" atomRefs="L-4-HYDROXY-PROLINE-atom6 L-4-HYDROXY-PROLINE-atom8" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond3" atomRefs="L-4-HYDROXY-PROLINE-atom7 L-4-HYDROXY-PROLINE-atom5" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond4" atomRefs="L-4-HYDROXY-PROLINE-atom2 L-4-HYDROXY-PROLINE-atom7" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond5" atomRefs="L-4-HYDROXY-PROLINE-atom7 L-4-HYDROXY-PROLINE-atom4" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond6" atomRefs="L-4-HYDROXY-PROLINE-atom6 L-4-HYDROXY-PROLINE-atom3" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond7" atomRefs="L-4-HYDROXY-PROLINE-atom6 L-4-HYDROXY-PROLINE-atom5" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond8" atomRefs="L-4-HYDROXY-PROLINE-atom4 L-4-HYDROXY-PROLINE-atom3" order="1"/> <bond id="L-4-HYDROXY-PROLINE-bond9" atomRefs="L-4-HYDROXY-PROLINE-atom1 L-4-HYDROXY-PROLINE-atom8" order="1"/> <formula concise="C 5 H 9 N 1 O 3" formalCharge="0"/> 131.131 C1(C(O)CC(N1)C(=O)O) L-Proline, 4-hydroxy-, trans-

unificationXref29352
type: unificationXref
DB: CapCyc
ID: L-4-HYDROXY-PROLINE

unificationXref29351
type: unificationXref
DB: CAS
ID: 51-35-4

phys-ent-participant27278
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27273
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27273
type: smallMolecule
MOLECULAR-WEIGHT: 785.556
NAME: FAD
STRUCTURE: chemicalStructure27277
SYNONYMS: flavin adenine dinucleotide oxidized
SYNONYMS: flavin adenine dinucleotide
SYNONYMS: flavitan
XREF: unificationXref27276
XREF: unificationXref27275
XREF: unificationXref27274

chemicalStructure27277
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FAD-atom1" elementType="N" x2="0.05610561" y2="-0.7491749"/> <atom id="FAD-atom2" elementType="C" x2="0.44224423" y2="0.40264025"/> <atom id="FAD-atom3" elementType="N" x2="0.5907591" y2="0.33333334"/> <atom id="FAD-atom4" elementType="N" x2="-0.0990099" y2="-0.49174917"/> <atom id="FAD-atom5" elementType="C" x2="-0.24422443" y2="-0.7491749"/> <atom id="FAD-atom6" elementType="N" x2="0.88448846" y2="0.34323433"/> <atom id="FAD-atom7" elementType="O" x2="-0.23762377" y2="0.15841584"/> <atom id="FAD-atom8" elementType="O" x2="-0.55775577" y2="-0.2640264"/> <atom id="FAD-atom9" elementType="C" x2="-1.0" y2="-0.48844886"/> <atom id="FAD-atom10" elementType="C" x2="-0.0990099" y2="-0.8349835"/> <atom id="FAD-atom11" elementType="O" x2="0.24752475" y2="0.32343236"/> <atom id="FAD-atom12" elementType="C" x2="-0.8613861" y2="-0.7491749"/> <atom id="FAD-atom13" elementType="C" x2="-0.8613861" y2="-0.57755774"/> <atom id="FAD-atom14" elementType="C" x2="-0.39273927" y2="0.02310231"/> <atom id="FAD-atom15" elementType="C" x2="0.5841584" y2="0.6666667"/> <atom id="FAD-atom16" elementType="C" x2="0.9966997" y2="0.4950495"/> <atom id="FAD-atom17" elementType="O" x2="-0.105610564" y2="0.32343236"/> <atom id="FAD-atom18" elementType="O" x2="0.08580858" y2="0.15841584"/> <atom id="FAD-atom19" elementType="C" x2="0.05610561" y2="-0.57755774"/> <atom id="FAD-atom20" elementType="C" x2="0.6138614" y2="0.15841584"/> <atom id="FAD-atom21" elementType="N" x2="-0.39933994" y2="-0.49174917"/> <atom id="FAD-atom22" elementType="C" x2="-0.39273927" y2="-0.2640264"/> <atom id="FAD-atom23" elementType="P" x2="-0.105610564" y2="0.15841584"/> <atom id="FAD-atom24" elementType="C" x2="-0.55775577" y2="-0.57755774"/> <atom id="FAD-atom25" elementType="C" x2="0.6138614" y2="-0.013201321"/> <atom id="FAD-atom26" elementType="C" x2="0.6831683" y2="-0.15181518"/> <atom id="FAD-atom27" elementType="O" x2="-0.105610564" y2="-0.0066006603"/> <atom id="FAD-atom28" elementType="C" x2="-0.7029703" …

unificationXref27276
type: unificationXref
DB: CapCyc
ID: FAD

unificationXref27275
type: unificationXref
DB: CAS
ID: 146-14-5

unificationXref27274
type: unificationXref
DB: LIGAND
ID: C00016

phys-ent-participant27318
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27315
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27315
type: smallMolecule
MOLECULAR-WEIGHT: 129.115
NAME: pyrroline-hydroxy-carboxylate
STRUCTURE: chemicalStructure27317
SYNONYMS: L-Δ1-pyrroline 3-hydroxy-5-carboxylate
XREF: unificationXref27316

chemicalStructure27317
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom1" elementType="O" x2="0.61477" y2="-1.0"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom2" elementType="O" x2="-1.0" y2="0.33547"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom3" elementType="N" x2="-0.23274" y2="-0.60193"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom4" elementType="O" x2="0.99679" y2="-0.22632"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom5" elementType="C" x2="0.14928" y2="0.04013"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom6" elementType="C" x2="0.14928" y2="-0.35474"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom7" elementType="C" x2="-0.61798" y2="0.04013"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom8" elementType="C" x2="0.61477" y2="-0.51846"/> <atom id="PYRROLINE-HYDROXY-CARBOXYLATE-atom9" elementType="C" x2="-0.61798" y2="-0.35474"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond1" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom9 PYRROLINE-HYDROXY-CARBOXYLATE-atom3" order="2"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond2" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom8 PYRROLINE-HYDROXY-CARBOXYLATE-atom6" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond3" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom7 PYRROLINE-HYDROXY-CARBOXYLATE-atom2" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond4" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom7 PYRROLINE-HYDROXY-CARBOXYLATE-atom9" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond5" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom6 PYRROLINE-HYDROXY-CARBOXYLATE-atom3" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond6" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom5 PYRROLINE-HYDROXY-CARBOXYLATE-atom7" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond7" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom5 PYRROLINE-HYDROXY-CARBOXYLATE-atom6" order="1"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bond8" atomRefs="PYRROLINE-HYDROXY-CARBOXYLATE-atom4 PYRROLINE-HYDROXY-CARBOXYLATE-atom8" order="2"/> <bond id="PYRROLINE-HYDROXY-CARBOXYLATE-bon…

unificationXref27316
type: unificationXref
DB: CapCyc
ID: PYRROLINE-HYDROXY-CARBOXYLATE

phys-ent-participant27290
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27285
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27285
type: smallMolecule
MOLECULAR-WEIGHT: 787.572
NAME: FADH2
STRUCTURE: chemicalStructure27289
SYNONYMS: flavin adenine dinucleotide reduced
SYNONYMS: 1,5-dihydro-FAD
XREF: unificationXref27288
XREF: unificationXref27287
XREF: unificationXref27286

chemicalStructure27289
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FADH2-atom1" elementType="N" x2="0.057660624" y2="-0.74958813"/> <atom id="FADH2-atom2" elementType="C" x2="-1.0" y2="-0.4892916"/> <atom id="FADH2-atom3" elementType="N" x2="0.5914333" y2="0.33113673"/> <atom id="FADH2-atom4" elementType="C" x2="-0.70016474" y2="-0.8352553"/> <atom id="FADH2-atom5" elementType="C" x2="-0.24217463" y2="-0.74958813"/> <atom id="FADH2-atom6" elementType="C" x2="0.7364086" y2="0.5848435"/> <atom id="FADH2-atom7" elementType="O" x2="0.7397035" y2="0.05107084"/> <atom id="FADH2-atom8" elementType="O" x2="-0.55189455" y2="-0.26523888"/> <atom id="FADH2-atom9" elementType="C" x2="0.057660624" y2="-0.5782537"/> <atom id="FADH2-atom10" elementType="C" x2="-0.09719934" y2="-0.8352553"/> <atom id="FADH2-atom11" elementType="O" x2="-0.23558484" y2="0.15650742"/> <atom id="FADH2-atom12" elementType="C" x2="-0.8583196" y2="-0.74958813"/> <atom id="FADH2-atom13" elementType="H" x2="-0.09390445" y2="-0.3443163"/> <atom id="FADH2-atom14" elementType="C" x2="-0.38714993" y2="0.021416804"/> <atom id="FADH2-atom15" elementType="N" x2="0.8846787" y2="0.34102142"/> <atom id="FADH2-atom16" elementType="C" x2="0.8846787" y2="-0.021416804"/> <atom id="FADH2-atom17" elementType="O" x2="-0.10378913" y2="0.32125205"/> <atom id="FADH2-atom18" elementType="O" x2="0.087314665" y2="0.15650742"/> <atom id="FADH2-atom19" elementType="O" x2="0.6540362" y2="-0.23558484"/> <atom id="FADH2-atom20" elementType="N" x2="-0.3937397" y2="-0.4925865"/> <atom id="FADH2-atom21" elementType="O" x2="0.40691927" y2="0.15650742"/> <atom id="FADH2-atom22" elementType="C" x2="-0.38714993" y2="-0.26523888"/> <atom id="FADH2-atom23" elementType="O" x2="-0.55189455" y2="0.021416804"/> <atom id="FADH2-atom24" elementType="C" x2="-0.55189455" y2="-0.5782537"/> <atom id="FADH2-atom25" elementType="N" x2="-0.3937397" y2="-0.8352553"/> <atom id="FADH2-atom26" elementType="C" x2="0.6540362" y2="-0.13673806"/> <atom id="FADH2-atom27" elementType="O" x2="-0.10378913" y2="-0.008237232"…

unificationXref27288
type: unificationXref
DB: CapCyc
ID: FADH2

unificationXref27287
type: unificationXref
DB: CAS
ID: 1910-41-4

unificationXref27286
type: unificationXref
DB: LIGAND
ID: C01352

unificationXref29349
type: unificationXref
DB: CapCyc
ID: HYDROXYPRODEHYDROG-RXN

phys-ent-participant27300
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27298
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27298
type: protein
NAME: PROLINE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27299

unificationXref27299
type: unificationXref
DB: CapCyc
ID: SGNU197154-MONOMER

unificationXref29358
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-145

catalysis29355
type: catalysis
CONTROLLED: biochemicalReaction29348
CONTROLLER: phys-ent-participant27295
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref29356

phys-ent-participant27295
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27293
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27293
type: protein
NAME: PROLINE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27294

unificationXref27294
type: unificationXref
DB: CapCyc
ID: SGNU197823-MONOMER

unificationXref29356
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-225

catalysis29346
type: catalysis
CONTROLLED: biochemicalReaction29344
CONTROLLER: phys-ent-participant24080
NAME: ISOAMYLASE
XREF: unificationXref29347

biochemicalReaction29344
type: biochemicalReaction
EC-NUMBER: 3.2.1.68
LEFT: phys-ent-participant21772
NAME: Isoamylase
RIGHT: phys-ent-participant26434
SYNONYMS: Debranching enzyme
XREF: unificationXref29345

phys-ent-participant21772
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21769
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21769
type: smallMolecule
COMMENT: Maltodextrins are linear polymers of glucose molecules joined by an O-glycosidic (α-1->4) bond. Maltodextrins are formed from the partial hydrolysis of starch and glycogen. It is a mixture of glucose, maltose (two glucose units), oligosaccharides, and polysaccharides.
NAME: maltodextrin
SYNONYMS: 4-{(1,4)-α-D-glucosyl}(n-1)-D-glucose
SYNONYMS: maltodextrins
SYNONYMS: maltodextrin(n)
SYNONYMS: maltodextrin(n-2)
SYNONYMS: n+2 maltodextrin
SYNONYMS: linear maltodextrin
XREF: unificationXref21771
XREF: unificationXref21770

unificationXref21771
type: unificationXref
DB: CapCyc
ID: CPD-1790

unificationXref21770
type: unificationXref
DB: LIGAND
ID: C01935

phys-ent-participant26434
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26429
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26429
type: smallMolecule
MOLECULAR-WEIGHT: 666.583
NAME: maltotetraose
STRUCTURE: chemicalStructure26433
XREF: unificationXref26432
XREF: unificationXref26431
XREF: unificationXref26430

chemicalStructure26433
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MALTOTETRAOSE-atom1" elementType="O" x2="0.0" y2="-3.7021"/> <atom id="MALTOTETRAOSE-atom2" elementType="O" x2="15.9367" y2="-12.6545"/> <atom id="MALTOTETRAOSE-atom3" elementType="O" x2="5.0433" y2="-6.3263"/> <atom id="MALTOTETRAOSE-atom4" elementType="O" x2="10.8741" y2="-9.0085"/> <atom id="MALTOTETRAOSE-atom5" elementType="O" x2="21.8292" y2="-11.7511"/> <atom id="MALTOTETRAOSE-atom6" elementType="O" x2="21.4038" y2="-9.1068"/> <atom id="MALTOTETRAOSE-atom7" elementType="O" x2="3.8192" y2="0.0"/> <atom id="MALTOTETRAOSE-atom8" elementType="O" x2="1.224" y2="-1.4572"/> <atom id="MALTOTETRAOSE-atom9" elementType="O" x2="6.3553" y2="-1.4572"/> <atom id="MALTOTETRAOSE-atom10" elementType="O" x2="16.3557" y2="-7.2301"/> <atom id="MALTOTETRAOSE-atom11" elementType="O" x2="10.3787" y2="-4.3726"/> <atom id="MALTOTETRAOSE-atom12" elementType="O" x2="18.901" y2="-8.1532"/> <atom id="MALTOTETRAOSE-atom13" elementType="O" x2="8.4842" y2="-3.0025"/> <atom id="MALTOTETRAOSE-atom14" elementType="O" x2="14.1399" y2="-5.7729"/> <atom id="MALTOTETRAOSE-atom15" elementType="C" x2="1.224" y2="-4.4318"/> <atom id="MALTOTETRAOSE-atom16" elementType="C" x2="17.3366" y2="-12.6699"/> <atom id="MALTOTETRAOSE-atom17" elementType="C" x2="6.3263" y2="-7.143"/> <atom id="MALTOTETRAOSE-atom18" elementType="C" x2="12.1572" y2="-9.9994"/> <atom id="MALTOTETRAOSE-atom19" elementType="O" x2="19.5392" y2="-12.1196"/> <atom id="MALTOTETRAOSE-atom20" elementType="O" x2="3.8192" y2="-4.4318"/> <atom id="MALTOTETRAOSE-atom21" elementType="O" x2="14.1399" y2="-10.0585"/> <atom id="MALTOTETRAOSE-atom22" elementType="O" x2="8.4842" y2="-6.9679"/> <atom id="MALTOTETRAOSE-atom23" elementType="O" x2="6.3553" y2="-4.4318"/> <atom id="MALTOTETRAOSE-atom24" elementType="O" x2="16.8511" y2="-9.8543"/> <atom id="MALTOTETRAOSE-atom25" elementType="O" x2="10.9912" y2="-7.143"/> <atom id="MALTOTETRAOSE-atom26" elementType="C" x2="20.5779" y2="-11.2743"/> <atom id="MALTOTETRAOSE-atom27" elementType="C" x2…

unificationXref26432
type: unificationXref
DB: CapCyc
ID: MALTOTETRAOSE

unificationXref26431
type: unificationXref
DB: CAS
ID: 34612-38-9

unificationXref26430
type: unificationXref
DB: LIGAND
ID: C02052

unificationXref29345
type: unificationXref
DB: CapCyc
ID: ISOAMYL-RXN

phys-ent-participant24080
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24078
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24078
type: protein
NAME: ISOAMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24079

unificationXref24079
type: unificationXref
DB: CapCyc
ID: SGNU202731-MONOMER

unificationXref29347
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-580

catalysis29305
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29309
NAME: coumarate 3-hydroxylase
XREF: unificationXref29306

biochemicalReaction29273
type: biochemicalReaction
LEFT: phys-ent-participant21579
LEFT: phys-ent-participant26753
LEFT: phys-ent-participant23342
NAME: RXN-1103
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant21463
RIGHT: phys-ent-participant26766
XREF: unificationXref29274

phys-ent-participant21579
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21575
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21575
type: smallMolecule
MOLECULAR-WEIGHT: 164.16
NAME: 4-coumarate
STRUCTURE: chemicalStructure21578
SYNONYMS: p-coumarate
SYNONYMS: trans-4-hydroxycinnamate
SYNONYMS: p-coumaric acid
SYNONYMS: 4-Hydroxycinnamic acid
SYNONYMS: 4-Hydroxycinnamate
SYNONYMS: coumarate
XREF: unificationXref21577
XREF: unificationXref21576

chemicalStructure21578
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="COUMARATE-atom1" elementType="C" x2="-0.69666666" y2="-0.70666665"/> <atom id="COUMARATE-atom2" elementType="C" x2="0.72" y2="-0.88"/> <atom id="COUMARATE-atom3" elementType="C" x2="-0.24333334" y2="-0.96666664"/> <atom id="COUMARATE-atom4" elementType="O" x2="0.99666667" y2="-1.0"/> <atom id="COUMARATE-atom5" elementType="C" x2="-0.24000001" y2="-0.44666666"/> <atom id="COUMARATE-atom6" elementType="C" x2="-0.53666663" y2="-0.44666666"/> <atom id="COUMARATE-atom7" elementType="O" x2="-1.0" y2="-0.70666665"/> <atom id="COUMARATE-atom8" elementType="O" x2="0.97333336" y2="-0.7166667"/> <atom id="COUMARATE-atom9" elementType="C" x2="0.14666665" y2="-0.86"/> <atom id="COUMARATE-atom10" elementType="C" x2="-0.53666663" y2="-0.96666664"/> <atom id="COUMARATE-atom11" elementType="C" x2="0.42000008" y2="-0.69666666"/> <atom id="COUMARATE-atom12" elementType="C" x2="-0.093333304" y2="-0.70666665"/> <bond id="COUMARATE-bond1" atomRefs="COUMARATE-atom12 COUMARATE-atom9" order="1"/> <bond id="COUMARATE-bond2" atomRefs="COUMARATE-atom12 COUMARATE-atom5" order="A"/> <bond id="COUMARATE-bond3" atomRefs="COUMARATE-atom11 COUMARATE-atom2" order="1"/> <bond id="COUMARATE-bond4" atomRefs="COUMARATE-atom10 COUMARATE-atom3" order="A"/> <bond id="COUMARATE-bond5" atomRefs="COUMARATE-atom9 COUMARATE-atom11" order="2"/> <bond id="COUMARATE-bond6" atomRefs="COUMARATE-atom8 COUMARATE-atom2" order="2"/> <bond id="COUMARATE-bond7" atomRefs="COUMARATE-atom7 COUMARATE-atom1" order="1"/> <bond id="COUMARATE-bond8" atomRefs="COUMARATE-atom6 COUMARATE-atom1" order="A"/> <bond id="COUMARATE-bond9" atomRefs="COUMARATE-atom5 COUMARATE-atom6" order="A"/> <bond id="COUMARATE-bond10" atomRefs="COUMARATE-atom3 COUMARATE-atom12" order="A"/> <bond id="COUMARATE-bond11" atomRefs="COUMARATE-atom2 COUMARATE-atom4" order="1"/> <bond id="COUMARATE-bond12" atomRefs="COUMARATE-atom1 COUMARATE-atom10" order="A"/> <formula concise="C 9 H 8 O 3" formalCharge="0"/> 164.16 C(O)(=O)C=Cc1(ccc(O)cc1)

unificationXref21577
type: unificationXref
DB: CapCyc
ID: COUMARATE

unificationXref21576
type: unificationXref
DB: CAS
ID: 7400-08-0

phys-ent-participant23342
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23337
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

phys-ent-participant21463
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21460
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21460
type: smallMolecule
MOLECULAR-WEIGHT: 180.16
NAME: caffeate
STRUCTURE: chemicalStructure21462
SYNONYMS: caffeic acid
XREF: unificationXref21461

chemicalStructure21462
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CAFFEATE-atom1" elementType="O" x2="-1.0" y2="-0.70227"/> <atom id="CAFFEATE-atom2" elementType="C" x2="0.42071" y2="-0.69579"/> <atom id="CAFFEATE-atom3" elementType="C" x2="0.14887" y2="-0.85761"/> <atom id="CAFFEATE-atom4" elementType="C" x2="0.72168" y2="-0.87702"/> <atom id="CAFFEATE-atom5" elementType="O" x2="0.99676" y2="-1.0"/> <atom id="CAFFEATE-atom6" elementType="O" x2="0.97735" y2="-0.71521"/> <atom id="CAFFEATE-atom7" elementType="C" x2="-0.69903" y2="-0.70227"/> <atom id="CAFFEATE-atom8" elementType="C" x2="-0.09061" y2="-0.70227"/> <atom id="CAFFEATE-atom9" elementType="C" x2="-0.54045" y2="-0.9644"/> <atom id="CAFFEATE-atom10" elementType="C" x2="-0.54045" y2="-0.44337"/> <atom id="CAFFEATE-atom11" elementType="O" x2="-0.71521" y2="-0.19741"/> <atom id="CAFFEATE-atom12" elementType="C" x2="-0.24272" y2="-0.9644"/> <atom id="CAFFEATE-atom13" elementType="C" x2="-0.24272" y2="-0.44337"/> <bond id="CAFFEATE-bond1" atomRefs="CAFFEATE-atom13 CAFFEATE-atom8" order="A"/> <bond id="CAFFEATE-bond2" atomRefs="CAFFEATE-atom8 CAFFEATE-atom12" order="A"/> <bond id="CAFFEATE-bond3" atomRefs="CAFFEATE-atom11 CAFFEATE-atom10" order="1"/> <bond id="CAFFEATE-bond4" atomRefs="CAFFEATE-atom10 CAFFEATE-atom13" order="A"/> <bond id="CAFFEATE-bond5" atomRefs="CAFFEATE-atom12 CAFFEATE-atom9" order="A"/> <bond id="CAFFEATE-bond6" atomRefs="CAFFEATE-atom8 CAFFEATE-atom3" order="1"/> <bond id="CAFFEATE-bond7" atomRefs="CAFFEATE-atom9 CAFFEATE-atom7" order="A"/> <bond id="CAFFEATE-bond8" atomRefs="CAFFEATE-atom7 CAFFEATE-atom10" order="A"/> <bond id="CAFFEATE-bond9" atomRefs="CAFFEATE-atom6 CAFFEATE-atom4" order="2"/> <bond id="CAFFEATE-bond10" atomRefs="CAFFEATE-atom4 CAFFEATE-atom5" order="1"/> <bond id="CAFFEATE-bond11" atomRefs="CAFFEATE-atom3 CAFFEATE-atom2" order="2"/> <bond id="CAFFEATE-bond12" atomRefs="CAFFEATE-atom2 CAFFEATE-atom4" order="1"/> <bond id="CAFFEATE-bond13" atomRefs="CAFFEATE-atom1 CAFFEATE-atom7" order="1"/> <formula concise="C 9 H 8 O 4" forma…

unificationXref21461
type: unificationXref
DB: CapCyc
ID: CAFFEATE

unificationXref29274
type: unificationXref
DB: CapCyc
ID: RXN-1103

phys-ent-participant29309
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29307
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29307
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29308

unificationXref29308
type: unificationXref
DB: CapCyc
ID: SGNU198050-MONOMER

unificationXref29306
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-255

catalysis29300
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29304
NAME: coumarate 3-hydroxylase
XREF: unificationXref29301

phys-ent-participant29304
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29302
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29302
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29303

unificationXref29303
type: unificationXref
DB: CapCyc
ID: SGNU199944-MONOMER

unificationXref29301
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-389

catalysis29295
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29299
NAME: coumarate 3-hydroxylase
XREF: unificationXref29296

phys-ent-participant29299
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29297
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29297
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29298

unificationXref29298
type: unificationXref
DB: CapCyc
ID: SGNU200984-MONOMER

unificationXref29296
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-461

catalysis29290
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29294
NAME: coumarate 3-hydroxylase
XREF: unificationXref29291

phys-ent-participant29294
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29292
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29292
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29293

unificationXref29293
type: unificationXref
DB: CapCyc
ID: SGNU202256-MONOMER

unificationXref29291
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-557

catalysis29285
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29289
NAME: coumarate 3-hydroxylase
XREF: unificationXref29286

phys-ent-participant29289
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29287
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29287
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29288

unificationXref29288
type: unificationXref
DB: CapCyc
ID: SGNU205550-MONOMER

unificationXref29286
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-725

catalysis29280
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29284
NAME: coumarate 3-hydroxylase
XREF: unificationXref29281

phys-ent-participant29284
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29282
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29282
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29283

unificationXref29283
type: unificationXref
DB: CapCyc
ID: SGNU199330-MONOMER

unificationXref29281
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-761

catalysis29275
type: catalysis
CONTROLLED: biochemicalReaction29273
CONTROLLER: phys-ent-participant29279
NAME: coumarate 3-hydroxylase
XREF: unificationXref29276

phys-ent-participant29279
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29277
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29277
type: protein
NAME: coumarate 3-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29278

unificationXref29278
type: unificationXref
DB: CapCyc
ID: SGNU199331-MONOMER

unificationXref29276
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-762

catalysis29268
type: catalysis
CONTROLLED: biochemicalReaction29257
CONTROLLER: phys-ent-participant29272
NAME: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
XREF: unificationXref29269

biochemicalReaction29257
type: biochemicalReaction
LEFT: phys-ent-participant24329
LEFT: phys-ent-participant24420
NAME: RXN-1224
RIGHT: phys-ent-participant29262
RIGHT: phys-ent-participant25132
XREF: unificationXref29258

phys-ent-participant24329
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24326
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24326
type: smallMolecule
MOLECULAR-WEIGHT: 630.364
NAME: UDP-sulfoquinovose
STRUCTURE: chemicalStructure24328
XREF: unificationXref24327

chemicalStructure24328
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UDP-SULFOQUINOVOSE-atom1" elementType="H" x2="15.2932" y2="-9.2962"/> <atom id="UDP-SULFOQUINOVOSE-atom2" elementType="O" x2="17.681" y2="-10.6388"/> <atom id="UDP-SULFOQUINOVOSE-atom3" elementType="O" x2="15.3031" y2="-6.5171"/> <atom id="UDP-SULFOQUINOVOSE-atom4" elementType="O" x2="10.2481" y2="-5.5161"/> <atom id="UDP-SULFOQUINOVOSE-atom5" elementType="O" x2="7.5077" y2="-5.5161"/> <atom id="UDP-SULFOQUINOVOSE-atom6" elementType="O" x2="2.754" y2="-5.5196"/> <atom id="UDP-SULFOQUINOVOSE-atom7" elementType="O" x2="0.0" y2="-5.5196"/> <atom id="UDP-SULFOQUINOVOSE-atom8" elementType="O" x2="3.7517" y2="0.0"/> <atom id="UDP-SULFOQUINOVOSE-atom9" elementType="O" x2="1.3803" y2="-1.3903"/> <atom id="UDP-SULFOQUINOVOSE-atom10" elementType="O" x2="13.5464" y2="-2.212"/> <atom id="UDP-SULFOQUINOVOSE-atom11" elementType="O" x2="6.1442" y2="-1.387"/> <atom id="UDP-SULFOQUINOVOSE-atom12" elementType="O" x2="16.5382" y2="-2.2099"/> <atom id="UDP-SULFOQUINOVOSE-atom13" elementType="O" x2="10.2439" y2="-2.7772"/> <atom id="UDP-SULFOQUINOVOSE-atom14" elementType="O" x2="7.5077" y2="-2.7772"/> <atom id="UDP-SULFOQUINOVOSE-atom15" elementType="O" x2="1.377" y2="-6.8966"/> <atom id="UDP-SULFOQUINOVOSE-atom16" elementType="C" x2="18.8861" y2="-8.5845"/> <atom id="UDP-SULFOQUINOVOSE-atom17" elementType="C" x2="18.8861" y2="-7.1997"/> <atom id="UDP-SULFOQUINOVOSE-atom18" elementType="C" x2="12.6389" y2="-5.0558"/> <atom id="UDP-SULFOQUINOVOSE-atom19" elementType="C" x2="1.377" y2="-4.1426"/> <atom id="UDP-SULFOQUINOVOSE-atom20" elementType="O" x2="11.6176" y2="-4.1436"/> <atom id="UDP-SULFOQUINOVOSE-atom21" elementType="O" x2="3.7621" y2="-4.1426"/> <atom id="UDP-SULFOQUINOVOSE-atom22" elementType="O" x2="15.0398" y2="-5.4248"/> <atom id="UDP-SULFOQUINOVOSE-atom23" elementType="O" x2="6.141" y2="-4.1421"/> <atom id="UDP-SULFOQUINOVOSE-atom24" elementType="O" x2="8.8771" y2="-4.1466"/> <atom id="UDP-SULFOQUINOVOSE-atom25" elementType="C" x2="17.6847" y2="-9.2694"/> <atom id=…

unificationXref24327
type: unificationXref
DB: CapCyc
ID: UDP-SULFOQUINOVOSE

phys-ent-participant24420
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24417
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24417
type: smallMolecule
NAME: a 1,2-diacylglycerol
STRUCTURE: chemicalStructure24419
SYNONYMS: 1,2-diasylglycerol
SYNONYMS: 1,2-diacyl-SN-glycerol
SYNONYMS: D-1,2-Diacylglycerol
SYNONYMS: DAG
XREF: unificationXref24418

chemicalStructure24419
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="DIACYLGLYCEROL" title="a 1,2-diacylglycerol" dictRef="dictDIACYLGLYCEROL"> <atomArray> <atom id="DIACYLGLYCEROL-atom1" elementType="O" x2="2.1434" y2="-1.2375"/> <atom id="DIACYLGLYCEROL-atom2" elementType="O" x2="0.7145" y2="-2.8876"/> <atom id="DIACYLGLYCEROL-atom3" elementType="O" x2="0.0" y2="-2.4751"/> <atom id="DIACYLGLYCEROL-atom4" elementType="R1" x2="2.858" y2="0.0"/> <atom id="DIACYLGLYCEROL-atom5" elementType="R2" x2="2.1434" y2="-2.8876"/> <atom id="DIACYLGLYCEROL-atom6" elementType="C" x2="0.0" y2="-1.65"/> <atom id="DIACYLGLYCEROL-atom7" elementType="C" x2="0.7145" y2="-0.4125"/> <atom id="DIACYLGLYCEROL-atom8" elementType="O" x2="1.4289" y2="0.0"/> <atom id="DIACYLGLYCEROL-atom9" elementType="O" x2="1.4289" y2="-1.65"/> <atom id="DIACYLGLYCEROL-atom10" elementType="C" x2="2.1434" y2="-0.4125"/> <atom id="DIACYLGLYCEROL-atom11" elementType="C" x2="1.4289" y2="-2.4751"/> <atom id="DIACYLGLYCEROL-atom12" elementType="C" x2="0.7145" y2="-1.2375"/> </atomArray> <bondArray> <bond id="DIACYLGLYCEROL-bond1" atomRefs="DIACYLGLYCEROL-atom1 DIACYLGLYCEROL-atom10" order="2"/> <bond id="DIACYLGLYCEROL-bond2" atomRefs="DIACYLGLYCEROL-atom2 DIACYLGLYCEROL-atom11" order="2"/> <bond id="DIACYLGLYCEROL-bond3" atomRefs="DIACYLGLYCEROL-atom3 DIACYLGLYCEROL-atom6" order="1"/> <bond id="DIACYLGLYCEROL-bond4" atomRefs="DIACYLGLYCEROL-atom4 DIACYLGLYCEROL-atom10" order="1"/> <bond id="DIACYLGLYCEROL-bond5" atomRefs="DIACYLGLYCEROL-atom5 DIACYLGLYCEROL-atom11" order="1"/> <bond id="DIACYLGLYCEROL-bond6" atomRefs="DIACYLGLYCEROL-atom6 DIACYLGLYCEROL-atom12" order="1"/> <bond id="DIACYLGLYCEROL-bond7" atomRefs="DIACYLGLYCEROL-atom7 DIACYLGLYCEROL-atom8" order="1"/> <bond id="DIACYLGLYCEROL-bond8" atomRefs="DIACYLGLYCEROL-atom7 DIACYLGLYCEROL-atom12" order="1"/> <bond id="DIACYLGLYCEROL-bond9" atomRefs="DIACYLGLYCEROL-atom8 DIACYLGLYCEROL-atom10" order="1"/> <bond id="DIACYLGLYCEROL-bond10" atomRefs="DIACYLGLYCEROL-atom9 DIACYLGLYCEROL-atom11" order="1"/> <bo…

unificationXref24418
type: unificationXref
DB: CapCyc
ID: DIACYLGLYCEROL

phys-ent-participant29262
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29259
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29259
type: smallMolecule
NAME: sulfoquinovosyldiacylglycerol
STRUCTURE: chemicalStructure29261
SYNONYMS: SQDG
SYNONYMS: SL
XREF: unificationXref29260

chemicalStructure29261
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="SULFOQUINOVOSYLDIACYLGLYCEROL" title="sulfoquinovosyldiacylglycerol" dictRef="dictSULFOQUINOVOSYLDIACYLGLYCEROL"> <atomArray> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom1" elementType="C" x2="0.79220784" y2="0.52380955"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom2" elementType="C" x2="-0.2251082" y2="-0.7662338"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom3" elementType="O" x2="-0.83116883" y2="-0.45887446"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom4" elementType="O" x2="-0.2251082" y2="-0.2987013"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom5" elementType="O" x2="0.79220784" y2="0.75757575"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom6" elementType="R" x2="0.99567103" y2="0.4069264" formalCharge="1"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom7" elementType="C" x2="-0.4285714" y2="-0.64935064"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom8" elementType="O" x2="-0.83116883" y2="-0.13852817"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom9" elementType="C" x2="0.18614721" y2="0.4069264"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom10" elementType="C" x2="-0.4285714" y2="-0.41558444"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom11" elementType="O" x2="-1.0" y2="-0.2987013"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom12" elementType="C" x2="-0.017316043" y2="-0.41558444"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom13" elementType="R" x2="0.3896104" y2="0.52380955" formalCharge="2"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom14" elementType="S" x2="-0.83116883" y2="-0.2987013"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom15" elementType="C" x2="0.3896104" y2="0.05194807"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom16" elementType="O" x2="0.18614721" y2="0.1731602"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom17" elementType="C" x2="0.58874464" y2="0.1731602"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom18" elementType="C" x2="0.3896104" y2="-0.18181819"/> <atom id="SULFOQUINOVOSYLDIACYLGLYCEROL-atom19" elementType="O" x2=…

unificationXref29260
type: unificationXref
DB: CapCyc
ID: SULFOQUINOVOSYLDIACYLGLYCEROL

unificationXref29258
type: unificationXref
DB: CapCyc
ID: RXN-1224

phys-ent-participant29272
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29270
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29270
type: protein
NAME: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
ORGANISM: bioSource20982
XREF: unificationXref29271

unificationXref29271
type: unificationXref
DB: CapCyc
ID: SGNU198741-MONOMER

unificationXref29269
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-325

catalysis29263
type: catalysis
CONTROLLED: biochemicalReaction29257
CONTROLLER: phys-ent-participant29267
NAME: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
XREF: unificationXref29264

phys-ent-participant29267
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29265
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29265
type: protein
NAME: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
ORGANISM: bioSource20982
XREF: unificationXref29266

unificationXref29266
type: unificationXref
DB: CapCyc
ID: SGNU202104-MONOMER

unificationXref29264
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-546

catalysis29140
type: catalysis
CONTROLLED: biochemicalReaction29134
CONTROLLER: phys-ent-participant28725
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref29141

biochemicalReaction29134
type: biochemicalReaction
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant21166
LEFT: phys-ent-participant26019
NAME: RXN-7712
RIGHT: phys-ent-participant22996
RIGHT: phys-ent-participant26027
XREF: unificationXref29135

phys-ent-participant26019
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26017
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26017
type: smallMolecule
COMMENT: NAD(P)H is a class of compounds including the instances NADH and NADPH.
MOLECULAR-WEIGHT: 2.016
NAME: NAD(P)H
XREF: unificationXref26018

unificationXref26018
type: unificationXref
DB: CapCyc
ID: NAD(P)H

phys-ent-participant22996
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22990
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22990
type: smallMolecule
MOLECULAR-WEIGHT: 192.125
NAME: isocitrate
STRUCTURE: chemicalStructure22995
SYNONYMS: isocitric acid
SYNONYMS: D-isocitrate
SYNONYMS: threo-Ds-isocitrate
SYNONYMS: I-CIT
XREF: unificationXref22994
XREF: unificationXref22993
XREF: unificationXref22992
XREF: unificationXref22991

chemicalStructure22995
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="threo-d(s)-iso-citrate-atom1" elementType="O" x2="-0.60531" y2="-1.0"/> <atom id="threo-d(s)-iso-citrate-atom2" elementType="O" x2="-0.63516" y2="0.99668"/> <atom id="threo-d(s)-iso-citrate-atom3" elementType="O" x2="-0.04478" y2="0.66501"/> <atom id="threo-d(s)-iso-citrate-atom4" elementType="C" x2="-0.42952" y2="0.00498"/> <atom id="threo-d(s)-iso-citrate-atom5" elementType="C" x2="-0.43284" y2="0.66501"/> <atom id="threo-d(s)-iso-citrate-atom6" elementType="C" x2="-0.41625" y2="-0.65837"/> <atom id="threo-d(s)-iso-citrate-atom7" elementType="C" x2="-0.05804" y2="0.00498"/> <atom id="threo-d(s)-iso-citrate-atom8" elementType="O" x2="0.25041" y2="-0.23383"/> <atom id="threo-d(s)-iso-citrate-atom9" elementType="O" x2="0.2272" y2="0.267"/> <atom id="threo-d(s)-iso-citrate-atom10" elementType="C" x2="-0.61194" y2="-0.33002"/> <atom id="threo-d(s)-iso-citrate-atom11" elementType="O" x2="-1.0" y2="-0.33002"/> <atom id="threo-d(s)-iso-citrate-atom12" elementType="O" x2="-0.02819" y2="-0.65837"/> <atom id="threo-d(s)-iso-citrate-atom13" elementType="C" x2="-0.62521" y2="0.3267"/> <bond id="threo-d(s)-iso-citrate-bond1" atomRefs="threo-d(s)-iso-citrate-atom13 threo-d(s)-iso-citrate-atom4" order="1"/> <bond id="threo-d(s)-iso-citrate-bond2" atomRefs="threo-d(s)-iso-citrate-atom12 threo-d(s)-iso-citrate-atom6" order="1"/> <bond id="threo-d(s)-iso-citrate-bond3" atomRefs="threo-d(s)-iso-citrate-atom11 threo-d(s)-iso-citrate-atom10" order="1"/> <bond id="threo-d(s)-iso-citrate-bond4" atomRefs="threo-d(s)-iso-citrate-atom10 threo-d(s)-iso-citrate-atom4" order="1"/> <bond id="threo-d(s)-iso-citrate-bond5" atomRefs="threo-d(s)-iso-citrate-atom9 threo-d(s)-iso-citrate-atom7" order="2"/> <bond id="threo-d(s)-iso-citrate-bond6" atomRefs="threo-d(s)-iso-citrate-atom8 threo-d(s)-iso-citrate-atom7" order="1"/> <bond id="threo-d(s)-iso-citrate-bond7" atomRefs="threo-d(s)-iso-citrate-atom7 threo-d(s)-iso-citrate-atom4" order="1"/> <bond id="threo-d(s)-iso-citrate-bond8" atomRef…

unificationXref22994
type: unificationXref
DB: CapCyc
ID: threo-d(s)-iso-citrate

unificationXref22993
type: unificationXref
DB: CAS
ID: 320-77-4

unificationXref22992
type: unificationXref
DB: LIGAND
ID: C00311

unificationXref22991
type: unificationXref
DB: CAS
ID: 30810-51-6

phys-ent-participant26027
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26025
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26025
type: smallMolecule
COMMENT: NAD(P)+ is a class of compounds including the instances NAD+ and NADP+.
MOLECULAR-WEIGHT: 0.0
NAME: NAD(P)+
SYNONYMS: NAD(P)
SYNONYMS: NAD(P)+
XREF: unificationXref26026

unificationXref26026
type: unificationXref
DB: CapCyc
ID: NAD(P)

unificationXref29135
type: unificationXref
DB: CapCyc
ID: RXN-7712

phys-ent-participant28725
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28723
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28723
type: protein
NAME: ISOCITRATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28724

unificationXref28724
type: unificationXref
DB: CapCyc
ID: SGNU196347-MONOMER

unificationXref29141
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-46

catalysis29138
type: catalysis
CONTROLLED: biochemicalReaction29134
CONTROLLER: phys-ent-participant28720
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref29139

phys-ent-participant28720
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28718
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28718
type: protein
NAME: ISOCITRATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28719

unificationXref28719
type: unificationXref
DB: CapCyc
ID: SGNU198231-MONOMER

unificationXref29139
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-280

catalysis29136
type: catalysis
CONTROLLED: biochemicalReaction29134
CONTROLLER: phys-ent-participant28715
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref29137

phys-ent-participant28715
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28713
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28713
type: protein
NAME: ISOCITRATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28714

unificationXref28714
type: unificationXref
DB: CapCyc
ID: SGNU204742-MONOMER

unificationXref29137
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-702

catalysis29090
type: catalysis
CONTROLLED: biochemicalReaction29084
CONTROLLER: phys-ent-participant29094
NAME: capsaicin synthase
XREF: unificationXref29091

biochemicalReaction29084
type: biochemicalReaction
LEFT: phys-ent-participant29027
LEFT: phys-ent-participant29089
NAME: RXN-8927
RIGHT: phys-ent-participant29033
RIGHT: phys-ent-participant20951
XREF: unificationXref29085

phys-ent-participant29027
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29024
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29024
type: smallMolecule
MOLECULAR-WEIGHT: 153.18
NAME: vanillylamine
STRUCTURE: chemicalStructure29026
SYNONYMS: capsaicin precursor
XREF: unificationXref29025

chemicalStructure29026
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-9327-atom1" elementType="C" x2="-18125.0" y2="-1063.0"/> <atom id="CPD-9327-atom2" elementType="C" x2="-25270.0" y2="11313.0"/> <atom id="CPD-9327-atom3" elementType="C" x2="-18125.0" y2="15438.0"/> <atom id="CPD-9327-atom4" elementType="C" x2="-10980.0" y2="11313.0"/> <atom id="CPD-9327-atom5" elementType="C" x2="-10980.0" y2="3062.0"/> <atom id="CPD-9327-atom6" elementType="C" x2="-3836.0" y2="15438.0"/> <atom id="CPD-9327-atom7" elementType="N" x2="3309.0" y2="11313.0"/> <atom id="CPD-9327-atom8" elementType="H" x2="3309.0" y2="3063.0"/> <atom id="CPD-9327-atom9" elementType="H" x2="10454.0" y2="15437.0"/> <atom id="CPD-9327-atom10" elementType="C" x2="-10980.0" y2="-13438.0"/> <atom id="CPD-9327-atom11" elementType="C" x2="-25270.0" y2="3062.0"/> <atom id="CPD-9327-atom12" elementType="O" x2="-18125.0" y2="-9313.0"/> <atom id="CPD-9327-atom13" elementType="O" x2="-31780.0" y2="-531.0"/> <atom id="CPD-9327-atom14" elementType="H" x2="-38714.0" y2="3939.0"/> <bond id="CPD-9327-bond1" atomRefs="CPD-9327-atom13 CPD-9327-atom14" order="1"/> <bond id="CPD-9327-bond2" atomRefs="CPD-9327-atom11 CPD-9327-atom13" order="1"/> <bond id="CPD-9327-bond3" atomRefs="CPD-9327-atom12 CPD-9327-atom10" order="1"/> <bond id="CPD-9327-bond4" atomRefs="CPD-9327-atom1 CPD-9327-atom12" order="1"/> <bond id="CPD-9327-bond5" atomRefs="CPD-9327-atom7 CPD-9327-atom8" order="1"/> <bond id="CPD-9327-bond6" atomRefs="CPD-9327-atom7 CPD-9327-atom9" order="1"/> <bond id="CPD-9327-bond7" atomRefs="CPD-9327-atom6 CPD-9327-atom7" order="1"/> <bond id="CPD-9327-bond8" atomRefs="CPD-9327-atom4 CPD-9327-atom6" order="1"/> <bond id="CPD-9327-bond9" atomRefs="CPD-9327-atom4 CPD-9327-atom5" order="1"/> <bond id="CPD-9327-bond10" atomRefs="CPD-9327-atom3 CPD-9327-atom4" order="2"/> <bond id="CPD-9327-bond11" atomRefs="CPD-9327-atom2 CPD-9327-atom3" order="1"/> <bond id="CPD-9327-bond12" atomRefs="CPD-9327-atom11 CPD-9327-atom2" order="2"/> <bond id="CPD-9327-bond13" atomRefs="CPD-9327-atom1 …

unificationXref29025
type: unificationXref
DB: CapCyc
ID: CPD-9327

phys-ent-participant29033
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29028
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29028
type: smallMolecule
MOLECULAR-WEIGHT: 305.416
NAME: capsaicinoid
STRUCTURE: chemicalStructure29032
SYNONYMS: capsaicin
XREF: unificationXref29031
XREF: unificationXref29030
XREF: unificationXref29029

chemicalStructure29032
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CAPSAICIN-atom1" elementType="C" x2="31563.0" y2="33438.0"/> <atom id="CAPSAICIN-atom2" elementType="C" x2="24418.0" y2="37563.0"/> <atom id="CAPSAICIN-atom3" elementType="C" x2="38707.0" y2="37563.0"/> <atom id="CAPSAICIN-atom4" elementType="C" x2="31563.0" y2="25188.0"/> <atom id="CAPSAICIN-atom5" elementType="H" x2="36007.0" y2="22256.0"/> <atom id="CAPSAICIN-atom6" elementType="C" x2="24418.0" y2="12813.0"/> <atom id="CAPSAICIN-atom7" elementType="C" x2="17273.0" y2="8688.0"/> <atom id="CAPSAICIN-atom8" elementType="C" x2="17273.0" y2="438.0"/> <atom id="CAPSAICIN-atom9" elementType="C" x2="10128.0" y2="-3687.0"/> <atom id="CAPSAICIN-atom10" elementType="C" x2="10128.0" y2="-11937.0"/> <atom id="CAPSAICIN-atom11" elementType="C" x2="2984.0" y2="-24312.0"/> <atom id="CAPSAICIN-atom12" elementType="C" x2="-4161.0" y2="-28437.0"/> <atom id="CAPSAICIN-atom13" elementType="C" x2="-18451.0" y2="-28438.0"/> <atom id="CAPSAICIN-atom14" elementType="C" x2="-11306.0" y2="-24313.0"/> <atom id="CAPSAICIN-atom15" elementType="C" x2="-4161.0" y2="-36687.0"/> <atom id="CAPSAICIN-atom16" elementType="C" x2="-11306.0" y2="-40813.0"/> <atom id="CAPSAICIN-atom17" elementType="C" x2="-18451.0" y2="-36688.0"/> <atom id="CAPSAICIN-atom18" elementType="C" x2="-4161.0" y2="-53188.0"/> <atom id="CAPSAICIN-atom19" elementType="O" x2="-11306.0" y2="-49063.0"/> <atom id="CAPSAICIN-atom20" elementType="O" x2="-25595.0" y2="-40813.0"/> <atom id="CAPSAICIN-atom21" elementType="H" x2="-31178.0" y2="-37313.0"/> <atom id="CAPSAICIN-atom22" elementType="O" x2="17273.0" y2="-16062.0"/> <atom id="CAPSAICIN-atom23" elementType="N" x2="2984.0" y2="-16062.0"/> <atom id="CAPSAICIN-atom24" elementType="H" x2="-2393.0" y2="-12226.0"/> <atom id="CAPSAICIN-atom25" elementType="C" x2="24418.0" y2="21063.0"/> <atom id="CAPSAICIN-atom26" elementType="H" x2="19148.0" y2="23313.0"/> <bond id="CAPSAICIN-bond1" atomRefs="CAPSAICIN-atom25 CAPSAICIN-atom26" order="1"/> <bond id="CAPSAICIN-bond2" atomRefs=…

unificationXref29031
type: unificationXref
DB: CapCyc
ID: CAPSAICIN

unificationXref29030
type: unificationXref
DB: PubChem
ID: 1548943

unificationXref29029
type: unificationXref
DB: LIGAND
ID: C06866

unificationXref29085
type: unificationXref
DB: CapCyc
ID: RXN-8927

phys-ent-participant29094
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29092
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29092
type: protein
COMMENT: A cDNA clone was isolated from C. frutescens, the cDNA was recombinantly expressed in E.coli and shown to catalyze the conversion of vanillylamine and 8-methylnoneoate into the capsaicin.
NAME: MONOMER2KO-52
ORGANISM: bioSource20982
XREF: unificationXref29093

unificationXref29093
type: unificationXref
DB: CapCyc
ID: MONOMER2KO-52

unificationXref29091
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-768

catalysis29082
type: catalysis
CONTROLLED: biochemicalReaction29074
CONTROLLER: phys-ent-participant22645
NAME: ENOYL COA HYDRATASE
XREF: unificationXref29083

biochemicalReaction29074
type: biochemicalReaction
LEFT: phys-ent-participant29079
LEFT: phys-ent-participant20951
NAME: RXN-902
RIGHT: phys-ent-participant29062
XREF: unificationXref29075

phys-ent-participant29079
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29076
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29076
type: smallMolecule
MOLECULAR-WEIGHT: 955.716
NAME: E-phenylitaconyl-CoA
STRUCTURE: chemicalStructure29078
SYNONYMS: E-phenylitaconyl-CoA
SYNONYMS: E-benzylidene-succinyl-CoA
XREF: unificationXref29077

chemicalStructure29078
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="E-PHENYLITACONYL-COA-atom1" elementType="O" x2="0.87129986" y2="0.1428572"/> <atom id="E-PHENYLITACONYL-COA-atom2" elementType="C" x2="0.3873874" y2="-0.8146718"/> <atom id="E-PHENYLITACONYL-COA-atom3" elementType="N" x2="0.19176316" y2="-0.6936937"/> <atom id="E-PHENYLITACONYL-COA-atom4" elementType="O" x2="-0.5315315" y2="-0.17117119"/> <atom id="E-PHENYLITACONYL-COA-atom5" elementType="C" x2="-0.9073359" y2="0.22522521"/> <atom id="E-PHENYLITACONYL-COA-atom6" elementType="C" x2="0.05791509" y2="-0.04504502"/> <atom id="E-PHENYLITACONYL-COA-atom7" elementType="O" x2="0.3590734" y2="0.14028311"/> <atom id="E-PHENYLITACONYL-COA-atom8" elementType="C" x2="0.3873874" y2="-0.39768338"/> <atom id="E-PHENYLITACONYL-COA-atom9" elementType="N" x2="0.48777354" y2="-0.64221364"/> <atom id="E-PHENYLITACONYL-COA-atom10" elementType="C" x2="0.3590734" y2="0.014157057"/> <atom id="E-PHENYLITACONYL-COA-atom11" elementType="C" x2="-0.62676966" y2="0.055341125"/> <atom id="E-PHENYLITACONYL-COA-atom12" elementType="O" x2="0.5675676" y2="-0.18661517"/> <atom id="E-PHENYLITACONYL-COA-atom13" elementType="O" x2="0.45688546" y2="-0.17117119"/> <atom id="E-PHENYLITACONYL-COA-atom14" elementType="N" x2="0.2561133" y2="-0.04504502"/> <atom id="E-PHENYLITACONYL-COA-atom15" elementType="C" x2="-0.2355212" y2="0.014157057"/> <atom id="E-PHENYLITACONYL-COA-atom16" elementType="C" x2="0.2741313" y2="-0.39768338"/> <atom id="E-PHENYLITACONYL-COA-atom17" elementType="O" x2="0.6962677" y2="-0.3153153"/> <atom id="E-PHENYLITACONYL-COA-atom18" elementType="C" x2="0.45688546" y2="-0.04504502"/> <atom id="E-PHENYLITACONYL-COA-atom19" elementType="O" x2="0.19691122" y2="-0.29472327"/> <atom id="E-PHENYLITACONYL-COA-atom20" elementType="C" x2="0.53410554" y2="-0.5366795"/> <atom id="E-PHENYLITACONYL-COA-atom21" elementType="C" x2="-0.72200775" y2="0.011582971"/> <atom id="E-PHENYLITACONYL-COA-atom22" elementType="N" x2="0.48777354" y2="-1.0"/> <atom id="E-PHENYLITACONYL-COA-atom23" elementType…

unificationXref29077
type: unificationXref
DB: CapCyc
ID: E-PHENYLITACONYL-COA

phys-ent-participant29062
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29059
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29059
type: smallMolecule
MOLECULAR-WEIGHT: 973.732
NAME: 2-carboxymethyl-3-hydroxyphenylpropionyl-CoA
STRUCTURE: chemicalStructure29061
XREF: unificationXref29060

chemicalStructure29061
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom1" elementType="C" x2="0.4570707" y2="-0.04545456"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom2" elementType="O" x2="0.8712121" y2="-0.58838385"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom3" elementType="O" x2="0.75" y2="0.017676711"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom4" elementType="P" x2="0.5681819" y2="-0.31565654"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom5" elementType="P" x2="0.8712121" y2="-0.45959598"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom6" elementType="N" x2="0.25757575" y2="-0.04545456"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom7" elementType="O" x2="0.6919192" y2="-0.45959598"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom8" elementType="C" x2="-0.04292929" y2="0.015151501"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom9" elementType="C" x2="0.55303025" y2="0.015151501"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom10" elementType="S" x2="-0.43434346" y2="0.015151501"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom11" elementType="C" x2="0.35858583" y2="0.015151501"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom12" elementType="C" x2="0.53535354" y2="-0.53535354"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom13" elementType="C" x2="0.55303025" y2="0.14141417"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom14" elementType="C" x2="0.38888884" y2="-0.6944444"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom15" elementType="N" x2="0.29040408" y2="-0.8712121"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom16" elementType="O" x2="0.19696975" y2="-0.29545456"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom17" elementType="C" x2="-1.0" y2="0.055555582"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom18" elementType="O" x2="-0.04292929" y2="0.14141417"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom19" elementType="O" x2="0.9974748" y2="-0.45959598"/> <atom id="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA-atom20"…

unificationXref29060
type: unificationXref
DB: CapCyc
ID: CARBOXYMETHYL-HYDROXYPHENYLPROPCOA

unificationXref29075
type: unificationXref
DB: CapCyc
ID: RXN-902

phys-ent-participant22645
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22643
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22643
type: protein
NAME: ENOYL COA HYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref22644

unificationXref22644
type: unificationXref
DB: CapCyc
ID: SGNU196860-MONOMER

unificationXref29083
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-114

catalysis29080
type: catalysis
CONTROLLED: biochemicalReaction29074
CONTROLLER: phys-ent-participant22640
NAME: ENOYL-COA HYDRATASE
XREF: unificationXref29081

phys-ent-participant22640
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22638
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22638
type: protein
NAME: ENOYL-COA HYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref22639

unificationXref22639
type: unificationXref
DB: CapCyc
ID: SGNU201541-MONOMER

unificationXref29081
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-504

catalysis29040
type: catalysis
CONTROLLED: biochemicalReaction29038
CONTROLLER: phys-ent-participant29044
NAME: beta-carotene hydroxylase
XREF: unificationXref29041

biochemicalReaction29038
type: biochemicalReaction
LEFT: phys-ent-participant21654
LEFT: phys-ent-participant22765
NAME: RXN1F-152
RIGHT: phys-ent-participant28098
XREF: unificationXref29039

phys-ent-participant21654
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21650
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21650
type: smallMolecule
MOLECULAR-WEIGHT: 536.882
NAME: beta-carotene
STRUCTURE: chemicalStructure21653
XREF: unificationXref21652
XREF: unificationXref21651

chemicalStructure21653
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-129-atom1" elementType="C" x2="7.2348" y2="-2.1601"/> <atom id="CPD1F-129-atom2" elementType="C" x2="10.8237" y2="-0.0723"/> <atom id="CPD1F-129-atom3" elementType="C" x2="4.377" y2="-2.1803"/> <atom id="CPD1F-129-atom4" elementType="C" x2="13.6502" y2="-0.052"/> <atom id="CPD1F-129-atom5" elementType="C" x2="8.6578" y2="-1.3249"/> <atom id="CPD1F-129-atom6" elementType="C" x2="9.3694" y2="-0.9074"/> <atom id="CPD1F-129-atom7" elementType="C" x2="5.8" y2="-1.3452"/> <atom id="CPD1F-129-atom8" elementType="C" x2="12.2272" y2="-0.8871"/> <atom id="CPD1F-129-atom9" elementType="C" x2="2.9422" y2="-1.3655"/> <atom id="CPD1F-129-atom10" elementType="C" x2="7.9404" y2="-0.9175"/> <atom id="CPD1F-129-atom11" elementType="C" x2="10.0867" y2="-1.3148"/> <atom id="CPD1F-129-atom12" elementType="C" x2="6.5115" y2="-0.9277"/> <atom id="CPD1F-129-atom13" elementType="C" x2="5.0826" y2="-0.9378"/> <atom id="CPD1F-129-atom14" elementType="C" x2="11.5156" y2="-1.3047"/> <atom id="CPD1F-129-atom15" elementType="C" x2="3.6537" y2="-0.9479"/> <atom id="CPD1F-129-atom16" elementType="C" x2="12.9445" y2="-1.2945"/> <atom id="CPD1F-129-atom17" elementType="C" x2="14.3734" y2="-1.2844"/> <atom id="CPD1F-129-atom18" elementType="C" x2="7.2289" y2="-1.3351"/> <atom id="CPD1F-129-atom19" elementType="C" x2="10.7983" y2="-0.8972"/> <atom id="CPD1F-129-atom20" elementType="C" x2="4.3711" y2="-1.3554"/> <atom id="CPD1F-129-atom21" elementType="C" x2="13.6561" y2="-0.877"/> <atom id="CPD1F-129-atom22" elementType="C" x2="2.2248" y2="-0.9581"/> <atom id="CPD1F-129-atom23" elementType="C" x2="1.5104" y2="-1.3706"/> <atom id="CPD1F-129-atom24" elementType="C" x2="0.7959" y2="-0.9581"/> <atom id="CPD1F-129-atom25" elementType="C" x2="0.7959" y2="-0.1331"/> <atom id="CPD1F-129-atom26" elementType="C" x2="1.5104" y2="0.2794"/> <atom id="CPD1F-129-atom27" elementType="C" x2="2.2248" y2="-0.1331"/> <atom id="CPD1F-129-atom28" elementType="C" x2="2.9393" y2="0.2794"/> <atom id="CPD1F-129-…

unificationXref21652
type: unificationXref
DB: CapCyc
ID: CPD1F-129

unificationXref21651
type: unificationXref
DB: CAS
ID: 7235-40-7

phys-ent-participant22765
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20943
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant28098
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28094
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28094
type: smallMolecule
MOLECULAR-WEIGHT: 568.881
NAME: zeaxanthin
STRUCTURE: chemicalStructure28097
SYNONYMS: β,β-carotene-3,3'-diol
XREF: unificationXref28096
XREF: unificationXref28095

chemicalStructure28097
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-130-atom1" elementType="C" x2="7.2348" y2="-2.1601"/> <atom id="CPD1F-130-atom2" elementType="C" x2="10.8237" y2="-0.0723"/> <atom id="CPD1F-130-atom3" elementType="C" x2="4.377" y2="-2.1803"/> <atom id="CPD1F-130-atom4" elementType="C" x2="13.6502" y2="-0.052"/> <atom id="CPD1F-130-atom5" elementType="C" x2="8.6578" y2="-1.3249"/> <atom id="CPD1F-130-atom6" elementType="C" x2="9.3694" y2="-0.9074"/> <atom id="CPD1F-130-atom7" elementType="C" x2="5.8" y2="-1.3452"/> <atom id="CPD1F-130-atom8" elementType="C" x2="12.2272" y2="-0.8871"/> <atom id="CPD1F-130-atom9" elementType="C" x2="2.9422" y2="-1.3655"/> <atom id="CPD1F-130-atom10" elementType="C" x2="7.9404" y2="-0.9175"/> <atom id="CPD1F-130-atom11" elementType="C" x2="10.0867" y2="-1.3148"/> <atom id="CPD1F-130-atom12" elementType="C" x2="6.5115" y2="-0.9277"/> <atom id="CPD1F-130-atom13" elementType="C" x2="5.0826" y2="-0.9378"/> <atom id="CPD1F-130-atom14" elementType="C" x2="11.5156" y2="-1.3047"/> <atom id="CPD1F-130-atom15" elementType="C" x2="3.6537" y2="-0.9479"/> <atom id="CPD1F-130-atom16" elementType="C" x2="12.9445" y2="-1.2945"/> <atom id="CPD1F-130-atom17" elementType="C" x2="14.3734" y2="-1.2844"/> <atom id="CPD1F-130-atom18" elementType="C" x2="7.2289" y2="-1.3351"/> <atom id="CPD1F-130-atom19" elementType="C" x2="10.7983" y2="-0.8972"/> <atom id="CPD1F-130-atom20" elementType="C" x2="4.3711" y2="-1.3554"/> <atom id="CPD1F-130-atom21" elementType="C" x2="13.6561" y2="-0.877"/> <atom id="CPD1F-130-atom22" elementType="C" x2="2.2248" y2="-0.9581"/> <atom id="CPD1F-130-atom23" elementType="C" x2="1.5104" y2="-1.3706"/> <atom id="CPD1F-130-atom24" elementType="C" x2="0.7959" y2="-0.9581"/> <atom id="CPD1F-130-atom25" elementType="C" x2="0.7959" y2="-0.1331"/> <atom id="CPD1F-130-atom26" elementType="C" x2="1.5104" y2="0.2794"/> <atom id="CPD1F-130-atom27" elementType="C" x2="2.2248" y2="-0.1331"/> <atom id="CPD1F-130-atom28" elementType="C" x2="2.9393" y2="0.2794"/> <atom id="CPD1F-130-…

unificationXref28096
type: unificationXref
DB: CapCyc
ID: CPD1F-130

unificationXref28095
type: unificationXref
DB: LIGAND
ID: C06098

unificationXref29039
type: unificationXref
DB: CapCyc
ID: RXN1F-152

phys-ent-participant29044
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29042
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29042
type: protein
NAME: beta-carotene hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref29043

unificationXref29043
type: unificationXref
DB: CapCyc
ID: SGNU197668-MONOMER

unificationXref29041
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-206

catalysis29012
type: catalysis
CONTROLLED: biochemicalReaction29005
CONTROLLER: phys-ent-participant29004
NAME: TETRACHLORO-P-HYDROQUINONE REDUCTIVE DEHALOGENASE
XREF: unificationXref29013

biochemicalReaction29005
type: biochemicalReaction
LEFT: phys-ent-participant29011
LEFT: phys-ent-participant28985
NAME: TECH1REDHAL-RXN
RIGHT: phys-ent-participant28984
RIGHT: phys-ent-participant28993
RIGHT: phys-ent-participant28999
XREF: unificationXref29006

phys-ent-participant29011
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule29007
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule29007
type: smallMolecule
MOLECULAR-WEIGHT: 247.893
NAME: tetrachlorohydroquinone
STRUCTURE: chemicalStructure29010
SYNONYMS: 2,3,5,6-tetrachlorohydroquinone
SYNONYMS: TeCH
XREF: unificationXref29009
XREF: unificationXref29008

chemicalStructure29010
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TETRACHLOROHYDROQUINONE-atom1" elementType="CL" x2="3.7321" y2="2.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom2" elementType="C" x2="3.7321" y2="1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom3" elementType="C" x2="2.866" y2="0.5"/> <atom id="TETRACHLOROHYDROQUINONE-atom4" elementType="C" x2="4.5981" y2="0.5"/> <atom id="TETRACHLOROHYDROQUINONE-atom5" elementType="CL" x2="2.0" y2="1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom6" elementType="C" x2="2.866" y2="-0.5"/> <atom id="TETRACHLOROHYDROQUINONE-atom7" elementType="O" x2="5.4641" y2="1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom8" elementType="C" x2="4.5981" y2="-0.5"/> <atom id="TETRACHLOROHYDROQUINONE-atom9" elementType="O" x2="2.0" y2="-1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom10" elementType="C" x2="3.7321" y2="-1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom11" elementType="CL" x2="5.4641" y2="-1.0"/> <atom id="TETRACHLOROHYDROQUINONE-atom12" elementType="CL" x2="3.732" y2="-2.0"/> <bond id="TETRACHLOROHYDROQUINONE-bond1" atomRefs="TETRACHLOROHYDROQUINONE-atom1 TETRACHLOROHYDROQUINONE-atom2" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond2" atomRefs="TETRACHLOROHYDROQUINONE-atom2 TETRACHLOROHYDROQUINONE-atom3" order="2"/> <bond id="TETRACHLOROHYDROQUINONE-bond3" atomRefs="TETRACHLOROHYDROQUINONE-atom2 TETRACHLOROHYDROQUINONE-atom4" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond4" atomRefs="TETRACHLOROHYDROQUINONE-atom3 TETRACHLOROHYDROQUINONE-atom5" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond5" atomRefs="TETRACHLOROHYDROQUINONE-atom3 TETRACHLOROHYDROQUINONE-atom6" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond6" atomRefs="TETRACHLOROHYDROQUINONE-atom4 TETRACHLOROHYDROQUINONE-atom7" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond7" atomRefs="TETRACHLOROHYDROQUINONE-atom4 TETRACHLOROHYDROQUINONE-atom8" order="2"/> <bond id="TETRACHLOROHYDROQUINONE-bond8" atomRefs="TETRACHLOROHYDROQUINONE-atom6 TETRACHLOROHYDROQUINONE-atom9" order="1"/> <bond id="TETRACHLOROHYDROQUINONE-bond9" ato…

unificationXref29009
type: unificationXref
DB: CapCyc
ID: TETRACHLOROHYDROQUINONE

unificationXref29008
type: unificationXref
DB: NCI
ID: 100888

phys-ent-participant28985
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20916
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule20916
type: smallMolecule
MOLECULAR-WEIGHT: 307.321
NAME: glutathione
STRUCTURE: chemicalStructure20920
SYNONYMS: γ-L-glutamyl-L-cysteinyl-glycine
SYNONYMS: glutathione red
SYNONYMS: GSH
SYNONYMS: reduced glutathione
XREF: unificationXref20919
XREF: unificationXref20918
XREF: unificationXref20917

chemicalStructure20920
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLUTATHIONE-atom1" elementType="N" x2="-0.99333334" y2="-0.63666666"/> <atom id="GLUTATHIONE-atom2" elementType="N" x2="0.60333335" y2="-0.64"/> <atom id="GLUTATHIONE-atom3" elementType="N" x2="0.013333321" y2="-0.5333333"/> <atom id="GLUTATHIONE-atom4" elementType="C" x2="-0.80333334" y2="-0.29666662"/> <atom id="GLUTATHIONE-atom5" elementType="C" x2="0.8000001" y2="-0.29666662"/> <atom id="GLUTATHIONE-atom6" elementType="O" x2="-1.0" y2="-0.20666665"/> <atom id="GLUTATHIONE-atom7" elementType="C" x2="0.8000001" y2="-0.5333333"/> <atom id="GLUTATHIONE-atom8" elementType="O" x2="0.4100001" y2="-0.31333333"/> <atom id="GLUTATHIONE-atom9" elementType="C" x2="-0.39666665" y2="-0.5333333"/> <atom id="GLUTATHIONE-atom10" elementType="C" x2="0.20333338" y2="-0.86"/> <atom id="GLUTATHIONE-atom11" elementType="C" x2="-0.6066667" y2="-0.64"/> <atom id="GLUTATHIONE-atom12" elementType="C" x2="-0.19666666" y2="-0.64"/> <atom id="GLUTATHIONE-atom13" elementType="C" x2="0.20333338" y2="-0.64"/> <atom id="GLUTATHIONE-atom14" elementType="S" x2="0.0333333" y2="-1.0"/> <atom id="GLUTATHIONE-atom15" elementType="C" x2="0.4100001" y2="-0.5333333"/> <atom id="GLUTATHIONE-atom16" elementType="O" x2="0.6" y2="-0.20666665"/> <atom id="GLUTATHIONE-atom17" elementType="O" x2="-0.60333335" y2="-0.20666665"/> <atom id="GLUTATHIONE-atom18" elementType="O" x2="0.99666667" y2="-0.20333332"/> <atom id="GLUTATHIONE-atom19" elementType="C" x2="-0.80333334" y2="-0.5333333"/> <atom id="GLUTATHIONE-atom20" elementType="O" x2="-0.19666666" y2="-0.8566667"/> <bond id="GLUTATHIONE-bond1" atomRefs="GLUTATHIONE-atom20 GLUTATHIONE-atom12" order="2"/> <bond id="GLUTATHIONE-bond2" atomRefs="GLUTATHIONE-atom19 GLUTATHIONE-atom11" order="1"/> <bond id="GLUTATHIONE-bond3" atomRefs="GLUTATHIONE-atom18 GLUTATHIONE-atom5" order="1"/> <bond id="GLUTATHIONE-bond4" atomRefs="GLUTATHIONE-atom17 GLUTATHIONE-atom4" order="1"/> <bond id="GLUTATHIONE-bond5" atomRefs="GLUTATHIONE-atom16 GLUTATHIONE-atom5" order="…

unificationXref20919
type: unificationXref
DB: CapCyc
ID: GLUTATHIONE

unificationXref20918
type: unificationXref
DB: CAS
ID: 70-18-8

unificationXref20917
type: unificationXref
DB: LIGAND
ID: C00051

phys-ent-participant28984
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28981
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28981
type: smallMolecule
MOLECULAR-WEIGHT: 213.447
NAME: 2,3,6-trichlorohydroquinone
STRUCTURE: chemicalStructure28983
XREF: unificationXref28982

chemicalStructure28983
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="236-TRICHLOROHYDROQUINONE-atom1" elementType="C" x2="-0.1380145" y2="-0.50121063"/> <atom id="236-TRICHLOROHYDROQUINONE-atom2" elementType="CL" x2="-0.1380145" y2="-1.0"/> <atom id="236-TRICHLOROHYDROQUINONE-atom3" elementType="CL" x2="-0.1380145" y2="0.9951575"/> <atom id="236-TRICHLOROHYDROQUINONE-atom4" elementType="C" x2="-0.1380145" y2="0.49636805"/> <atom id="236-TRICHLOROHYDROQUINONE-atom5" elementType="C" x2="-0.5690073" y2="0.24939477"/> <atom id="236-TRICHLOROHYDROQUINONE-atom6" elementType="C" x2="0.29782093" y2="0.24939477"/> <atom id="236-TRICHLOROHYDROQUINONE-atom7" elementType="C" x2="-0.5690073" y2="-0.25423723"/> <atom id="236-TRICHLOROHYDROQUINONE-atom8" elementType="O" x2="0.72881365" y2="0.49636805"/> <atom id="236-TRICHLOROHYDROQUINONE-atom9" elementType="C" x2="0.29782093" y2="-0.25423723"/> <atom id="236-TRICHLOROHYDROQUINONE-atom10" elementType="O" x2="-1.0" y2="-0.50121063"/> <atom id="236-TRICHLOROHYDROQUINONE-atom11" elementType="CL" x2="0.72881365" y2="-0.50121063"/> <bond id="236-TRICHLOROHYDROQUINONE-bond1" atomRefs="236-TRICHLOROHYDROQUINONE-atom9 236-TRICHLOROHYDROQUINONE-atom1" order="1"/> <bond id="236-TRICHLOROHYDROQUINONE-bond2" atomRefs="236-TRICHLOROHYDROQUINONE-atom9 236-TRICHLOROHYDROQUINONE-atom11" order="1"/> <bond id="236-TRICHLOROHYDROQUINONE-bond3" atomRefs="236-TRICHLOROHYDROQUINONE-atom7 236-TRICHLOROHYDROQUINONE-atom1" order="2"/> <bond id="236-TRICHLOROHYDROQUINONE-bond4" atomRefs="236-TRICHLOROHYDROQUINONE-atom7 236-TRICHLOROHYDROQUINONE-atom10" order="1"/> <bond id="236-TRICHLOROHYDROQUINONE-bond5" atomRefs="236-TRICHLOROHYDROQUINONE-atom6 236-TRICHLOROHYDROQUINONE-atom9" order="2"/> <bond id="236-TRICHLOROHYDROQUINONE-bond6" atomRefs="236-TRICHLOROHYDROQUINONE-atom6 236-TRICHLOROHYDROQUINONE-atom8" order="1"/> <bond id="236-TRICHLOROHYDROQUINONE-bond7" atomRefs="236-TRICHLOROHYDROQUINONE-atom5 236-TRICHLOROHYDROQUINONE-atom7" order="1"/> <bond id="236-TRICHLOROHYDROQUINONE-bond8" atomRefs="236-TRICHLOROHY…

unificationXref28982
type: unificationXref
DB: CapCyc
ID: 236-TRICHLOROHYDROQUINONE

phys-ent-participant28993
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28990
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28990
type: smallMolecule
MOLECULAR-WEIGHT: 36.461
NAME: HCl
STRUCTURE: chemicalStructure28992
SYNONYMS: hydrogen chloride
SYNONYMS: hydrochloric acid
XREF: unificationXref28991

chemicalStructure28992
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HCL-atom1" elementType="CL" x2="3.1792" y2="-0.5292"/> <atom id="HCL-atom2" elementType="H" x2="4.1745" y2="0.0042"/> <bond id="HCL-bond1" atomRefs="HCL-atom1 HCL-atom2" order="1"/> <formula concise="H 1 CL 1" formalCharge="0"/> 36.461 [ClH]

unificationXref28991
type: unificationXref
DB: CapCyc
ID: HCL

phys-ent-participant28999
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28994
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28994
type: smallMolecule
MOLECULAR-WEIGHT: 612.626
NAME: glutathione disulfide
STRUCTURE: chemicalStructure28998
SYNONYMS: glutathione oxidized
SYNONYMS: glutathione ox
SYNONYMS: GSSG
SYNONYMS: glutathione
SYNONYMS: GSH
SYNONYMS: ox. glutathione
SYNONYMS: oxidized glutathione
XREF: unificationXref28997
XREF: unificationXref28996
XREF: unificationXref28995

chemicalStructure28998
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OXIDIZED-GLUTATHIONE-atom1" elementType="O" x2="-0.21498" y2="0.14984"/> <atom id="OXIDIZED-GLUTATHIONE-atom2" elementType="C" x2="-0.21498" y2="-0.78176"/> <atom id="OXIDIZED-GLUTATHIONE-atom3" elementType="O" x2="0.60261" y2="-0.29642"/> <atom id="OXIDIZED-GLUTATHIONE-atom4" elementType="N" x2="0.60912" y2="-0.78176"/> <atom id="OXIDIZED-GLUTATHIONE-atom5" elementType="C" x2="0.79479" y2="0.74267"/> <atom id="OXIDIZED-GLUTATHIONE-atom6" elementType="C" x2="-0.59935" y2="0.36808"/> <atom id="OXIDIZED-GLUTATHIONE-atom7" elementType="C" x2="0.79479" y2="-0.39739"/> <atom id="OXIDIZED-GLUTATHIONE-atom8" elementType="C" x2="0.79479" y2="0.50163"/> <atom id="OXIDIZED-GLUTATHIONE-atom9" elementType="O" x2="0.41368" y2="-0.443"/> <atom id="OXIDIZED-GLUTATHIONE-atom10" elementType="O" x2="0.41368" y2="0.71987"/> <atom id="OXIDIZED-GLUTATHIONE-atom11" elementType="C" x2="0.19218" y2="0.1759"/> <atom id="OXIDIZED-GLUTATHIONE-atom12" elementType="C" x2="-0.80456" y2="0.74267"/> <atom id="OXIDIZED-GLUTATHIONE-atom13" elementType="N" x2="0.60912" y2="0.36808"/> <atom id="OXIDIZED-GLUTATHIONE-atom14" elementType="C" x2="-0.42345" y2="0.50163"/> <atom id="OXIDIZED-GLUTATHIONE-atom15" elementType="O" x2="-0.61564" y2="0.84691"/> <atom id="OXIDIZED-GLUTATHIONE-atom16" elementType="N" x2="-0.01303" y2="-0.66124"/> <atom id="OXIDIZED-GLUTATHIONE-atom17" elementType="O" x2="-0.21498" y2="-1.0"/> <atom id="OXIDIZED-GLUTATHIONE-atom18" elementType="N" x2="-0.9772" y2="0.36482"/> <atom id="OXIDIZED-GLUTATHIONE-atom19" elementType="C" x2="-0.59935" y2="-0.78176"/> <atom id="OXIDIZED-GLUTATHIONE-atom20" elementType="C" x2="-0.42345" y2="-0.66124"/> <atom id="OXIDIZED-GLUTATHIONE-atom21" elementType="C" x2="-0.80456" y2="0.50163"/> <atom id="OXIDIZED-GLUTATHIONE-atom22" elementType="O" x2="0.59935" y2="0.84039"/> <atom id="OXIDIZED-GLUTATHIONE-atom23" elementType="C" x2="0.79479" y2="-0.66124"/> <atom id="OXIDIZED-GLUTATHIONE-atom24" elementType="O" x2="-0.61889" y2="-0.28664"/> <…

unificationXref28997
type: unificationXref
DB: CapCyc
ID: OXIDIZED-GLUTATHIONE

unificationXref28996
type: unificationXref
DB: CAS
ID: 27025-41-8

unificationXref28995
type: unificationXref
DB: LIGAND
ID: C00127

unificationXref29006
type: unificationXref
DB: CapCyc
ID: TECH1REDHAL-RXN

phys-ent-participant29004
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein29002
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein29002
type: protein
NAME: TETRACHLORO-P-HYDROQUINONE REDUCTIVE DEHALOGENASE
ORGANISM: bioSource20982
XREF: unificationXref29003

unificationXref29003
type: unificationXref
DB: CapCyc
ID: SGNU204023-MONOMER

unificationXref29013
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-659

catalysis29000
type: catalysis
CONTROLLED: biochemicalReaction28979
CONTROLLER: phys-ent-participant29004
NAME: TETRACHLORO-P-HYDROQUINONE REDUCTIVE DEHALOGENASE
XREF: unificationXref29001

biochemicalReaction28979
type: biochemicalReaction
LEFT: phys-ent-participant28984
LEFT: phys-ent-participant28985
NAME: TECH2REDHAL-RXN
RIGHT: phys-ent-participant28989
RIGHT: phys-ent-participant28993
RIGHT: phys-ent-participant28999
XREF: unificationXref28980

phys-ent-participant28989
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28986
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28986
type: smallMolecule
MOLECULAR-WEIGHT: 179.002
NAME: 2,6-dichloro-p-hydroquinone
STRUCTURE: chemicalStructure28988
SYNONYMS: 2,6-DiCH
SYNONYMS: DiCH
XREF: unificationXref28987

chemicalStructure28988
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="26-DICHLORO-P-HYDROQUINONE-atom1" elementType="O" x2="-1.0" y2="-1.0"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom2" elementType="C" x2="-0.0028011203" y2="-1.0"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom3" elementType="CL" x2="-0.0028011203" y2="0.7254902"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom4" elementType="C" x2="-0.0028011203" y2="0.14845943"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom5" elementType="C" x2="-0.5014006" y2="-0.1372549"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom6" elementType="C" x2="0.49579835" y2="-0.1372549"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom7" elementType="C" x2="-0.5014006" y2="-0.71428573"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom8" elementType="O" x2="0.99439776" y2="0.14845943"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom9" elementType="C" x2="0.49579835" y2="-0.71428573"/> <atom id="26-DICHLORO-P-HYDROQUINONE-atom10" elementType="CL" x2="0.99439776" y2="-1.0"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond1" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom9 26-DICHLORO-P-HYDROQUINONE-atom10" order="1"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond2" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom9 26-DICHLORO-P-HYDROQUINONE-atom2" order="1"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond3" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom7 26-DICHLORO-P-HYDROQUINONE-atom1" order="1"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond4" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom7 26-DICHLORO-P-HYDROQUINONE-atom2" order="2"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond5" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom6 26-DICHLORO-P-HYDROQUINONE-atom8" order="1"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond6" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom6 26-DICHLORO-P-HYDROQUINONE-atom9" order="2"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond7" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom5 26-DICHLORO-P-HYDROQUINONE-atom7" order="1"/> <bond id="26-DICHLORO-P-HYDROQUINONE-bond8" atomRefs="26-DICHLORO-P-HYDROQUINONE-atom4 26-DICHLORO-P-HYDROQUINONE-atom5" order="2"/> <bond …

unificationXref28987
type: unificationXref
DB: CapCyc
ID: 26-DICHLORO-P-HYDROQUINONE

unificationXref28980
type: unificationXref
DB: CapCyc
ID: TECH2REDHAL-RXN

unificationXref29001
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-660

catalysis28932
type: catalysis
CONTROLLED: biochemicalReaction28925
CONTROLLER: phys-ent-participant28936
NAME: 3-HYDROXYISOBUTYRATE DEHYDROGENASE
XREF: unificationXref28933

biochemicalReaction28925
type: biochemicalReaction
EC-NUMBER: 1.1.1.31
LEFT: phys-ent-participant27218
LEFT: phys-ent-participant24570
NAME: 3-hydroxyisobutyrate dehydrogenase
RIGHT: phys-ent-participant27230
RIGHT: phys-ent-participant27779
XREF: unificationXref28926

phys-ent-participant24570
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24566
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24566
type: smallMolecule
MOLECULAR-WEIGHT: 104.105
NAME: 3-hydroxy-isobutyrate
STRUCTURE: chemicalStructure24569
SYNONYMS: 3-Hydroxy-2-methylpropanoate
SYNONYMS: 3-Hydroxyisobutyric acid
SYNONYMS: 3-OH-iso-but
SYNONYMS: 3-OH-isobutyrate
XREF: unificationXref24568
XREF: unificationXref24567

chemicalStructure24569
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-HYDROXY-ISOBUTYRATE-atom1" elementType="C" x2="0.48029" y2="0.03584"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom2" elementType="O" x2="-1.0" y2="0.4086"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom3" elementType="O" x2="0.99642" y2="0.36559"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom4" elementType="C" x2="-0.07527" y2="0.3871"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom5" elementType="C" x2="-0.07527" y2="1.0"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom6" elementType="O" x2="0.48029" y2="-0.57706"/> <atom id="3-HYDROXY-ISOBUTYRATE-atom7" elementType="C" x2="-0.50538" y2="0.04301"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond1" atomRefs="3-HYDROXY-ISOBUTYRATE-atom7 3-HYDROXY-ISOBUTYRATE-atom4" order="1"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond2" atomRefs="3-HYDROXY-ISOBUTYRATE-atom6 3-HYDROXY-ISOBUTYRATE-atom1" order="2"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond3" atomRefs="3-HYDROXY-ISOBUTYRATE-atom5 3-HYDROXY-ISOBUTYRATE-atom4" order="1"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond4" atomRefs="3-HYDROXY-ISOBUTYRATE-atom4 3-HYDROXY-ISOBUTYRATE-atom1" order="1"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond5" atomRefs="3-HYDROXY-ISOBUTYRATE-atom3 3-HYDROXY-ISOBUTYRATE-atom1" order="1"/> <bond id="3-HYDROXY-ISOBUTYRATE-bond6" atomRefs="3-HYDROXY-ISOBUTYRATE-atom2 3-HYDROXY-ISOBUTYRATE-atom7" order="1"/> <formula concise="C 4 H 8 O 3" formalCharge="0"/> 104.105 C(O)(=O)C(C)CO propanoic acid, 3-hydroxy-2-methyl-

unificationXref24568
type: unificationXref
DB: CapCyc
ID: 3-HYDROXY-ISOBUTYRATE

unificationXref24567
type: unificationXref
DB: CAS
ID: 2068-83-9

phys-ent-participant27779
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27775
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27775
type: smallMolecule
MOLECULAR-WEIGHT: 102.09
NAME: methylmalonate-semialdehyde
STRUCTURE: chemicalStructure27778
SYNONYMS: 2-methyl-3-oxopropanoate
SYNONYMS: CH3-malonate-S-ald
SYNONYMS: ch3-malonate-semialdehyde
XREF: unificationXref27777
XREF: unificationXref27776

chemicalStructure27778
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CH3-MALONATE-S-ALD-atom1" elementType="C" x2="0.37268" y2="-0.24789"/> <atom id="CH3-MALONATE-S-ALD-atom2" elementType="C" x2="-1.0" y2="-0.30523"/> <atom id="CH3-MALONATE-S-ALD-atom3" elementType="C" x2="-0.32209" y2="0.84486"/> <atom id="CH3-MALONATE-S-ALD-atom4" elementType="C" x2="-0.32209" y2="0.09275"/> <atom id="CH3-MALONATE-S-ALD-atom5" elementType="O" x2="-1.0" y2="0.44688"/> <atom id="CH3-MALONATE-S-ALD-atom6" elementType="O" x2="0.37268" y2="-1.0"/> <atom id="CH3-MALONATE-S-ALD-atom7" elementType="O" x2="0.99663" y2="0.17032"/> <bond id="CH3-MALONATE-S-ALD-bond1" atomRefs="CH3-MALONATE-S-ALD-atom7 CH3-MALONATE-S-ALD-atom1" order="1"/> <bond id="CH3-MALONATE-S-ALD-bond2" atomRefs="CH3-MALONATE-S-ALD-atom6 CH3-MALONATE-S-ALD-atom1" order="2"/> <bond id="CH3-MALONATE-S-ALD-bond3" atomRefs="CH3-MALONATE-S-ALD-atom4 CH3-MALONATE-S-ALD-atom1" order="1"/> <bond id="CH3-MALONATE-S-ALD-bond4" atomRefs="CH3-MALONATE-S-ALD-atom3 CH3-MALONATE-S-ALD-atom4" order="1"/> <bond id="CH3-MALONATE-S-ALD-bond5" atomRefs="CH3-MALONATE-S-ALD-atom2 CH3-MALONATE-S-ALD-atom5" order="2"/> <bond id="CH3-MALONATE-S-ALD-bond6" atomRefs="CH3-MALONATE-S-ALD-atom2 CH3-MALONATE-S-ALD-atom4" order="1"/> <formula concise="C 4 H 6 O 3" formalCharge="0"/> 102.09 C(=O)(O)C(C)C=O

unificationXref27777
type: unificationXref
DB: CapCyc
ID: CH3-MALONATE-S-ALD

unificationXref27776
type: unificationXref
DB: CAS
ID: 6236-08-4

unificationXref28926
type: unificationXref
DB: CapCyc
ID: 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN

phys-ent-participant28936
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28934
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28934
type: protein
NAME: 3-HYDROXYISOBUTYRATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28935

unificationXref28935
type: unificationXref
DB: CapCyc
ID: SGNU198250-MONOMER

unificationXref28933
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-282

catalysis28927
type: catalysis
CONTROLLED: biochemicalReaction28925
CONTROLLER: phys-ent-participant28931
NAME: 3-HYDROXYISOBUTYRATE DEHYDROGENASE
XREF: unificationXref28928

phys-ent-participant28931
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28929
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28929
type: protein
NAME: 3-HYDROXYISOBUTYRATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28930

unificationXref28930
type: unificationXref
DB: CapCyc
ID: SGNU198760-MONOMER

unificationXref28928
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-328

catalysis28918
type: catalysis
CONTROLLED: biochemicalReaction28906
CONTROLLER: phys-ent-participant28922
NAME: 3-isopropylmalate dehydrogenase
XREF: unificationXref28919

biochemicalReaction28906
type: biochemicalReaction
EC-NUMBER: 1.1.1.85
LEFT: phys-ent-participant28912
LEFT: phys-ent-participant27218
NAME: 3-isopropylmalate dehydrogenase
RIGHT: phys-ent-participant25832
RIGHT: phys-ent-participant27230
RIGHT: phys-ent-participant21166
SYNONYMS: β-isopropylmalate dehydrogenase
SYNONYMS: IMDH
SYNONYMS: β-IPM dehydrogenase
XREF: unificationXref28907

phys-ent-participant25832
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25827
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25827
type: smallMolecule
MOLECULAR-WEIGHT: 130.143
NAME: 2-keto-4-methyl-pentanoate
STRUCTURE: chemicalStructure25831
SYNONYMS: 4-methyl-2-oxopentanoate
SYNONYMS: 2-keto-isocaproate
SYNONYMS: 2-oxoisocaproate
SYNONYMS: 2-oxo-4-methylpentanoate
SYNONYMS: α-ketoisocaproate
SYNONYMS: α-oxoisocaproate
XREF: unificationXref25830
XREF: unificationXref25829
XREF: unificationXref25828

chemicalStructure25831
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2K-4CH3-PENTANOATE-atom1" elementType="C" x2="-0.59511" y2="-1.0"/> <atom id="2K-4CH3-PENTANOATE-atom2" elementType="C" x2="-1.0" y2="-0.35428"/> <atom id="2K-4CH3-PENTANOATE-atom3" elementType="C" x2="0.58464" y2="-0.32984"/> <atom id="2K-4CH3-PENTANOATE-atom4" elementType="O" x2="0.99651" y2="-0.51483"/> <atom id="2K-4CH3-PENTANOATE-atom5" elementType="C" x2="-0.26003" y2="-0.32984"/> <atom id="2K-4CH3-PENTANOATE-atom6" elementType="C" x2="0.17976" y2="-0.53578"/> <atom id="2K-4CH3-PENTANOATE-atom7" elementType="C" x2="-0.59511" y2="-0.54974"/> <atom id="2K-4CH3-PENTANOATE-atom8" elementType="O" x2="0.58464" y2="0.12042"/> <atom id="2K-4CH3-PENTANOATE-atom9" elementType="O" x2="0.17976" y2="-0.98604"/> <bond id="2K-4CH3-PENTANOATE-bond1" atomRefs="2K-4CH3-PENTANOATE-atom9 2K-4CH3-PENTANOATE-atom6" order="2"/> <bond id="2K-4CH3-PENTANOATE-bond2" atomRefs="2K-4CH3-PENTANOATE-atom8 2K-4CH3-PENTANOATE-atom3" order="2"/> <bond id="2K-4CH3-PENTANOATE-bond3" atomRefs="2K-4CH3-PENTANOATE-atom7 2K-4CH3-PENTANOATE-atom5" order="1"/> <bond id="2K-4CH3-PENTANOATE-bond4" atomRefs="2K-4CH3-PENTANOATE-atom6 2K-4CH3-PENTANOATE-atom3" order="1"/> <bond id="2K-4CH3-PENTANOATE-bond5" atomRefs="2K-4CH3-PENTANOATE-atom5 2K-4CH3-PENTANOATE-atom6" order="1"/> <bond id="2K-4CH3-PENTANOATE-bond6" atomRefs="2K-4CH3-PENTANOATE-atom4 2K-4CH3-PENTANOATE-atom3" order="1"/> <bond id="2K-4CH3-PENTANOATE-bond7" atomRefs="2K-4CH3-PENTANOATE-atom2 2K-4CH3-PENTANOATE-atom7" order="1"/> <bond id="2K-4CH3-PENTANOATE-bond8" atomRefs="2K-4CH3-PENTANOATE-atom1 2K-4CH3-PENTANOATE-atom7" order="1"/> <formula concise="C 6 H 10 O 3" formalCharge="0"/> 130.143 CC(C)CC(=O)C(=O)O 4-methyl-2-oxopentanoic acid

unificationXref25830
type: unificationXref
DB: CapCyc
ID: 2K-4CH3-PENTANOATE

unificationXref25829
type: unificationXref
DB: CAS
ID: 816-66-0

unificationXref25828
type: unificationXref
DB: LIGAND
ID: C00233

unificationXref28907
type: unificationXref
DB: CapCyc
ID: 3-ISOPROPYLMALDEHYDROG-RXN

phys-ent-participant28922
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28920
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28920
type: protein
NAME: 3-isopropylmalate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref28921

unificationXref28921
type: unificationXref
DB: CapCyc
ID: SGNU196665-MONOMER

unificationXref28919
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-84

catalysis28913
type: catalysis
CONTROLLED: biochemicalReaction28906
CONTROLLER: phys-ent-participant28917
NAME: 3-ISOPROPYLMALATE DEHYDROGENASE
XREF: unificationXref28914

phys-ent-participant28917
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28915
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28915
type: protein
NAME: 3-ISOPROPYLMALATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28916

unificationXref28916
type: unificationXref
DB: CapCyc
ID: SGNU205558-MONOMER

unificationXref28914
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-726

catalysis28901
type: catalysis
CONTROLLED: biochemicalReaction28894
CONTROLLER: phys-ent-participant28905
NAME: 6-PHOSPHOGLUCONATE DEHYDROGENASE
XREF: unificationXref28902

biochemicalReaction28894
type: biochemicalReaction
EC-NUMBER: 1.1.1.44
LEFT: phys-ent-participant24807
LEFT: phys-ent-participant26027
NAME: Phosphogluconate dehydrogenase (decarboxylating)
RIGHT: phys-ent-participant22099
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant26019
SYNONYMS: 6PGD
SYNONYMS: 6-phosphogluconic carboxylase
SYNONYMS: 6-phosphogluconic dehydrogenase
SYNONYMS: Phosphogluconic acid dehydrogenase
XREF: unificationXref28895

phys-ent-participant24807
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24803
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24803
type: smallMolecule
MOLECULAR-WEIGHT: 276.136
NAME: 6-phospho-D-gluconate
STRUCTURE: chemicalStructure24806
SYNONYMS: 6-p-gluconate
SYNONYMS: 6-phospho-gluconate
SYNONYMS: 6-phosphogluconic acid
XREF: unificationXref24805
XREF: unificationXref24804

chemicalStructure24806
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-2961-atom1" elementType="H" x2="1.1761" y2="-4.2238"/> <atom id="CPD-2961-atom2" elementType="H" x2="3.492" y2="-5.628"/> <atom id="CPD-2961-atom3" elementType="H" x2="0.0" y2="-4.1159"/> <atom id="CPD-2961-atom4" elementType="H" x2="1.1761" y2="-7.3317"/> <atom id="CPD-2961-atom5" elementType="O" x2="5.9456" y2="-5.6142"/> <atom id="CPD-2961-atom6" elementType="O" x2="3.7079" y2="0.0"/> <atom id="CPD-2961-atom7" elementType="O" x2="5.9881" y2="-4.4108"/> <atom id="CPD-2961-atom8" elementType="O" x2="3.492" y2="-3.3719"/> <atom id="CPD-2961-atom9" elementType="O" x2="3.492" y2="-7.3317"/> <atom id="CPD-2961-atom10" elementType="O" x2="0.0" y2="-5.8196"/> <atom id="CPD-2961-atom11" elementType="O" x2="1.1761" y2="-5.628"/> <atom id="CPD-2961-atom12" elementType="O" x2="5.1238" y2="-1.4159"/> <atom id="CPD-2961-atom13" elementType="O" x2="3.7079" y2="-2.8318"/> <atom id="CPD-2961-atom14" elementType="C" x2="1.1761" y2="-2.3879"/> <atom id="CPD-2961-atom15" elementType="O" x2="2.2079" y2="-1.4159"/> <atom id="CPD-2961-atom16" elementType="C" x2="4.7037" y2="-4.9678"/> <atom id="CPD-2961-atom17" elementType="C" x2="1.1761" y2="-3.3719"/> <atom id="CPD-2961-atom18" elementType="C" x2="3.492" y2="-6.4799"/> <atom id="CPD-2961-atom19" elementType="C" x2="0.0" y2="-4.9678"/> <atom id="CPD-2961-atom20" elementType="C" x2="1.1761" y2="-6.4799"/> <atom id="CPD-2961-atom21" elementType="P" x2="3.7079" y2="-1.4159"/> <bond id="CPD-2961-bond1" atomRefs="CPD-2961-atom19 CPD-2961-atom20" order="1"/> <bond id="CPD-2961-bond2" atomRefs="CPD-2961-atom18 CPD-2961-atom20" order="1"/> <bond id="CPD-2961-bond3" atomRefs="CPD-2961-atom17 CPD-2961-atom19" order="1"/> <bond id="CPD-2961-bond4" atomRefs="CPD-2961-atom16 CPD-2961-atom18" order="1"/> <bond id="CPD-2961-bond5" atomRefs="CPD-2961-atom15 CPD-2961-atom21" order="1"/> <bond id="CPD-2961-bond6" atomRefs="CPD-2961-atom14 CPD-2961-atom17" order="1"/> <bond id="CPD-2961-bond7" atomRefs="CPD-2961-atom14 CPD-2961-atom15" ord…

unificationXref24805
type: unificationXref
DB: CapCyc
ID: CPD-2961

unificationXref24804
type: unificationXref
DB: LIGAND
ID: C00345

phys-ent-participant22099
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22094
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22094
type: smallMolecule
MOLECULAR-WEIGHT: 230.111
NAME: D-ribulose-5-phosphate
STRUCTURE: chemicalStructure22098
SYNONYMS: ribulose-5P
SYNONYMS: D-ribulose-5-P
SYNONYMS: ribulose-5-P
SYNONYMS: ribulose-5-phosphate
XREF: unificationXref22097
XREF: unificationXref22096
XREF: unificationXref22095

chemicalStructure22098
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="RIBULOSE-5P-atom1" elementType="O" x2="-0.54967" y2="-0.57947"/> <atom id="RIBULOSE-5P-atom2" elementType="O" x2="0.39073" y2="0.54967"/> <atom id="RIBULOSE-5P-atom3" elementType="C" x2="-1.0" y2="-0.99669"/> <atom id="RIBULOSE-5P-atom4" elementType="P" x2="-0.0596" y2="0.54967"/> <atom id="RIBULOSE-5P-atom5" elementType="C" x2="-1.0" y2="0.54967"/> <atom id="RIBULOSE-5P-atom6" elementType="C" x2="-1.0" y2="0.17881"/> <atom id="RIBULOSE-5P-atom7" elementType="C" x2="-1.0" y2="-0.2053"/> <atom id="RIBULOSE-5P-atom8" elementType="O" x2="-0.0596" y2="1.0"/> <atom id="RIBULOSE-5P-atom9" elementType="O" x2="-0.54967" y2="-0.99669"/> <atom id="RIBULOSE-5P-atom10" elementType="O" x2="-0.0596" y2="0.09934"/> <atom id="RIBULOSE-5P-atom11" elementType="C" x2="-1.0" y2="-0.57947"/> <atom id="RIBULOSE-5P-atom12" elementType="O" x2="-0.54967" y2="0.17881"/> <atom id="RIBULOSE-5P-atom13" elementType="O" x2="-0.54967" y2="-0.2053"/> <atom id="RIBULOSE-5P-atom14" elementType="O" x2="-0.43709" y2="0.54967"/> <bond id="RIBULOSE-5P-bond1" atomRefs="RIBULOSE-5P-atom14 RIBULOSE-5P-atom4" order="1"/> <bond id="RIBULOSE-5P-bond2" atomRefs="RIBULOSE-5P-atom13 RIBULOSE-5P-atom7" order="1"/> <bond id="RIBULOSE-5P-bond3" atomRefs="RIBULOSE-5P-atom12 RIBULOSE-5P-atom6" order="1"/> <bond id="RIBULOSE-5P-bond4" atomRefs="RIBULOSE-5P-atom11 RIBULOSE-5P-atom7" order="1"/> <bond id="RIBULOSE-5P-bond5" atomRefs="RIBULOSE-5P-atom10 RIBULOSE-5P-atom4" order="2"/> <bond id="RIBULOSE-5P-bond6" atomRefs="RIBULOSE-5P-atom9 RIBULOSE-5P-atom3" order="1"/> <bond id="RIBULOSE-5P-bond7" atomRefs="RIBULOSE-5P-atom8 RIBULOSE-5P-atom4" order="1"/> <bond id="RIBULOSE-5P-bond8" atomRefs="RIBULOSE-5P-atom7 RIBULOSE-5P-atom6" order="1"/> <bond id="RIBULOSE-5P-bond9" atomRefs="RIBULOSE-5P-atom6 RIBULOSE-5P-atom5" order="1"/> <bond id="RIBULOSE-5P-bond10" atomRefs="RIBULOSE-5P-atom5 RIBULOSE-5P-atom14" order="1"/> <bond id="RIBULOSE-5P-bond11" atomRefs="RIBULOSE-5P-atom3 RIBULOSE-5P-atom11" order="1"/> <bond …

unificationXref22097
type: unificationXref
DB: CapCyc
ID: RIBULOSE-5P

unificationXref22096
type: unificationXref
DB: CAS
ID: 4151-19-3

unificationXref22095
type: unificationXref
DB: LIGAND
ID: C00199

unificationXref28895
type: unificationXref
DB: CapCyc
ID: 6PGLUCONDEHYDROG-RXN

phys-ent-participant28905
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28903
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28903
type: protein
NAME: 6-PHOSPHOGLUCONATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28904

unificationXref28904
type: unificationXref
DB: CapCyc
ID: SGNU197867-MONOMER

unificationXref28902
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-231

catalysis28896
type: catalysis
CONTROLLED: biochemicalReaction28894
CONTROLLER: phys-ent-participant28900
NAME: 6-PHOSPHOGLUCONATE DEHYDROGENASE
XREF: unificationXref28897

phys-ent-participant28900
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28898
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28898
type: protein
NAME: 6-PHOSPHOGLUCONATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28899

unificationXref28899
type: unificationXref
DB: CapCyc
ID: SGNU203934-MONOMER

unificationXref28897
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-647

catalysis28892
type: catalysis
CONTROLLED: biochemicalReaction28886
CONTROLLER: phys-ent-participant28885
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28893

biochemicalReaction28886
type: biochemicalReaction
EC-NUMBER: 1.1.1.86
LEFT: phys-ent-participant26923
LEFT: phys-ent-participant26753
NAME: Ketol-acid reductoisomerase
RIGHT: phys-ent-participant22929
RIGHT: phys-ent-participant26766
SYNONYMS: α-keto-β-hydroxylacil reductoisomerase
SYNONYMS: Acetohydroxy acid isomeroreductase
SYNONYMS: Dihydroxyisovalerate dehydrogenase (isomerizing)
XREF: unificationXref28887

phys-ent-participant26923
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26918
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26918
type: smallMolecule
MOLECULAR-WEIGHT: 132.116
NAME: 2-acetolactate
STRUCTURE: chemicalStructure26922
SYNONYMS: (S)-2-hydroxy-2-methyl-3-oxobutanoate
SYNONYMS: α-acetolactate
XREF: unificationXref26921
XREF: unificationXref26920
XREF: unificationXref26919

chemicalStructure26922
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-ACETO-LACTATE-atom1" elementType="C" x2="0.0" y2="-1.3338"/> <atom id="2-ACETO-LACTATE-atom2" elementType="C" x2="1.9549" y2="0.0"/> <atom id="2-ACETO-LACTATE-atom3" elementType="O" x2="1.2036" y2="-3.3957"/> <atom id="2-ACETO-LACTATE-atom4" elementType="O" x2="3.826" y2="-3.2753"/> <atom id="2-ACETO-LACTATE-atom5" elementType="O" x2="5.145" y2="-1.9933"/> <atom id="2-ACETO-LACTATE-atom6" elementType="O" x2="3.6363" y2="-0.5191"/> <atom id="2-ACETO-LACTATE-atom7" elementType="C" x2="1.2036" y2="-2.0154"/> <atom id="2-ACETO-LACTATE-atom8" elementType="C" x2="3.7498" y2="-1.8774"/> <atom id="2-ACETO-LACTATE-atom9" elementType="C" x2="2.4743" y2="-1.3001"/> <bond id="2-ACETO-LACTATE-bond1" atomRefs="2-ACETO-LACTATE-atom8 2-ACETO-LACTATE-atom9" order="1"/> <bond id="2-ACETO-LACTATE-bond2" atomRefs="2-ACETO-LACTATE-atom7 2-ACETO-LACTATE-atom9" order="1"/> <bond id="2-ACETO-LACTATE-bond3" atomRefs="2-ACETO-LACTATE-atom9 2-ACETO-LACTATE-atom6" order="1"/> <bond id="2-ACETO-LACTATE-bond4" atomRefs="2-ACETO-LACTATE-atom5 2-ACETO-LACTATE-atom8" order="1"/> <bond id="2-ACETO-LACTATE-bond5" atomRefs="2-ACETO-LACTATE-atom4 2-ACETO-LACTATE-atom8" order="2"/> <bond id="2-ACETO-LACTATE-bond6" atomRefs="2-ACETO-LACTATE-atom3 2-ACETO-LACTATE-atom7" order="2"/> <bond id="2-ACETO-LACTATE-bond7" atomRefs="2-ACETO-LACTATE-atom9 2-ACETO-LACTATE-atom2" order="1"/> <bond id="2-ACETO-LACTATE-bond8" atomRefs="2-ACETO-LACTATE-atom1 2-ACETO-LACTATE-atom7" order="1"/> <formula concise="C 5 H 8 O 4" formalCharge="0"/> 132.116 CC(=O)C(C)(O)C(O)=O

unificationXref26921
type: unificationXref
DB: CapCyc
ID: 2-ACETO-LACTATE

unificationXref26920
type: unificationXref
DB: LIGAND
ID: C06010

unificationXref26919
type: unificationXref
DB: PubChem
ID: 440878

phys-ent-participant22929
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22925
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22925
type: smallMolecule
MOLECULAR-WEIGHT: 134.132
NAME: 2,3-dihydroxy-isovalerate
STRUCTURE: chemicalStructure22928
SYNONYMS: 2,3-dihydroxy-3-methylbutanoate
SYNONYMS: (R)-2,3-dihydroxy-3-methylbutanoate
SYNONYMS: α,β-dihydroxy-isovalerate
XREF: unificationXref22927
XREF: unificationXref22926

chemicalStructure22928
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DIOH-ISOVALERATE-atom1" elementType="C" x2="-0.0017" y2="-0.1545"/> <atom id="DIOH-ISOVALERATE-atom2" elementType="O" x2="0.51104" y2="-1.0"/> <atom id="DIOH-ISOVALERATE-atom3" elementType="C" x2="-0.51443" y2="-0.44312"/> <atom id="DIOH-ISOVALERATE-atom4" elementType="C" x2="-1.0" y2="-0.16808"/> <atom id="DIOH-ISOVALERATE-atom5" elementType="C" x2="0.51104" y2="-0.44312"/> <atom id="DIOH-ISOVALERATE-atom6" elementType="O" x2="-0.51443" y2="-1.0"/> <atom id="DIOH-ISOVALERATE-atom7" elementType="O" x2="0.9966" y2="-0.17148"/> <atom id="DIOH-ISOVALERATE-atom8" elementType="O" x2="-0.0017" y2="-0.71138"/> <atom id="DIOH-ISOVALERATE-atom9" elementType="C" x2="-0.51443" y2="0.11375"/> <bond id="DIOH-ISOVALERATE-bond1" atomRefs="DIOH-ISOVALERATE-atom8 DIOH-ISOVALERATE-atom1" order="1"/> <bond id="DIOH-ISOVALERATE-bond2" atomRefs="DIOH-ISOVALERATE-atom7 DIOH-ISOVALERATE-atom5" order="1"/> <bond id="DIOH-ISOVALERATE-bond3" atomRefs="DIOH-ISOVALERATE-atom6 DIOH-ISOVALERATE-atom3" order="1"/> <bond id="DIOH-ISOVALERATE-bond4" atomRefs="DIOH-ISOVALERATE-atom5 DIOH-ISOVALERATE-atom1" order="1"/> <bond id="DIOH-ISOVALERATE-bond5" atomRefs="DIOH-ISOVALERATE-atom4 DIOH-ISOVALERATE-atom3" order="1"/> <bond id="DIOH-ISOVALERATE-bond6" atomRefs="DIOH-ISOVALERATE-atom3 DIOH-ISOVALERATE-atom9" order="1"/> <bond id="DIOH-ISOVALERATE-bond7" atomRefs="DIOH-ISOVALERATE-atom3 DIOH-ISOVALERATE-atom1" order="1"/> <bond id="DIOH-ISOVALERATE-bond8" atomRefs="DIOH-ISOVALERATE-atom2 DIOH-ISOVALERATE-atom5" order="2"/> <formula concise="C 5 H 10 O 4" formalCharge="0"/> 134.132 CC(C)(O)C(O)C(O)=O

unificationXref22927
type: unificationXref
DB: CapCyc
ID: DIOH-ISOVALERATE

unificationXref22926
type: unificationXref
DB: LIGAND
ID: C04272

unificationXref28887
type: unificationXref
DB: CapCyc
ID: ACETOLACTREDUCTOISOM-RXN

phys-ent-participant28885
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28883
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28883
type: protein
NAME: KETOL-ACID REDUCTOISOMERASE
ORGANISM: bioSource20982
XREF: unificationXref28884

unificationXref28884
type: unificationXref
DB: CapCyc
ID: SGNU196248-MONOMER

unificationXref28893
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-19

catalysis28890
type: catalysis
CONTROLLED: biochemicalReaction28886
CONTROLLER: phys-ent-participant28880
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28891

phys-ent-participant28880
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28878
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28878
type: protein
NAME: KETOL-ACID REDUCTOISOMERASE
ORGANISM: bioSource20982
XREF: unificationXref28879

unificationXref28879
type: unificationXref
DB: CapCyc
ID: SGNU196585-MONOMER

unificationXref28891
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-71

catalysis28888
type: catalysis
CONTROLLED: biochemicalReaction28886
CONTROLLER: phys-ent-participant28875
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28889

phys-ent-participant28875
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28873
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28873
type: protein
NAME: KETOL-ACID REDUCTOISOMERASE
ORGANISM: bioSource20982
XREF: unificationXref28874

unificationXref28874
type: unificationXref
DB: CapCyc
ID: SGNU199113-MONOMER

unificationXref28889
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-740

catalysis28881
type: catalysis
CONTROLLED: biochemicalReaction28869
CONTROLLER: phys-ent-participant28885
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28882

biochemicalReaction28869
type: biochemicalReaction
EC-NUMBER: 1.1.1.86
LEFT: phys-ent-participant26899
LEFT: phys-ent-participant26753
NAME: Ketol-acid reductoisomerase
RIGHT: phys-ent-participant22916
RIGHT: phys-ent-participant26766
SYNONYMS: α-keto-β-hydroxylacil reductoisomerase
SYNONYMS: Acetohydroxy acid isomeroreductase
SYNONYMS: Dihydroxyisovalerate dehydrogenase (isomerizing)
XREF: unificationXref28870

phys-ent-participant26899
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26893
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26893
type: smallMolecule
MOLECULAR-WEIGHT: 146.143
NAME: 2-aceto-2-hydroxy-butyrate
STRUCTURE: chemicalStructure26898
SYNONYMS: α-aceto-α-hydroxybutyrate
XREF: unificationXref26897
XREF: unificationXref26896
XREF: unificationXref26895
XREF: unificationXref26894

chemicalStructure26898
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom1" elementType="C" x2="-0.49477" y2="0.41115"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom2" elementType="C" x2="-0.00348" y2="-1.0"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom3" elementType="C" x2="-0.00348" y2="0.12544"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom4" elementType="O" x2="-0.00348" y2="0.7108"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom5" elementType="O" x2="0.4878" y2="0.99652"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom6" elementType="C" x2="0.4878" y2="0.41115"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom7" elementType="C" x2="-1.0" y2="0.11498"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom8" elementType="O" x2="0.99303" y2="0.11498"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom9" elementType="C" x2="-0.00348" y2="-0.41463"/> <atom id="2-ACETO-2-HYDROXY-BUTYRATE-atom10" elementType="O" x2="0.57491" y2="-0.41463"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond1" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom10 2-ACETO-2-HYDROXY-BUTYRATE-atom9" order="2"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond2" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom9 2-ACETO-2-HYDROXY-BUTYRATE-atom3" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond3" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom8 2-ACETO-2-HYDROXY-BUTYRATE-atom6" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond4" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom7 2-ACETO-2-HYDROXY-BUTYRATE-atom1" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond5" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom6 2-ACETO-2-HYDROXY-BUTYRATE-atom3" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond6" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom5 2-ACETO-2-HYDROXY-BUTYRATE-atom6" order="2"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond7" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom4 2-ACETO-2-HYDROXY-BUTYRATE-atom3" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond8" atomRefs="2-ACETO-2-HYDROXY-BUTYRATE-atom2 2-ACETO-2-HYDROXY-BUTYRATE-atom9" order="1"/> <bond id="2-ACETO-2-HYDROXY-BUTYRATE-bond9" atomRefs="2-…

unificationXref26897
type: unificationXref
DB: CapCyc
ID: 2-ACETO-2-HYDROXY-BUTYRATE

unificationXref26896
type: unificationXref
DB: CAS
ID: 3142-65-2

unificationXref26895
type: unificationXref
DB: PubChem
ID: 21

unificationXref26894
type: unificationXref
DB: LIGAND
ID: C06006

phys-ent-participant22916
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22912
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22912
type: smallMolecule
MOLECULAR-WEIGHT: 148.158
NAME: 2,3-dihydroxy-3-methylvalerate
STRUCTURE: chemicalStructure22915
SYNONYMS: (R)-2,3-Dihydroxy-3-methylpentanoate
SYNONYMS: (R)-2,3-Dihydroxy-3-methylvalerate
SYNONYMS: 2,3-dihydroxy-3-methylpentanoate
XREF: unificationXref22914
XREF: unificationXref22913

chemicalStructure22915
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="1-KETO-2-METHYLVALERATE-atom1" elementType="C" x2="-0.62927" y2="-0.55122"/> <atom id="1-KETO-2-METHYLVALERATE-atom2" elementType="C" x2="-0.21301" y2="0.13496"/> <atom id="1-KETO-2-METHYLVALERATE-atom3" elementType="C" x2="0.19675" y2="-0.55122"/> <atom id="1-KETO-2-METHYLVALERATE-atom4" elementType="O" x2="0.99675" y2="-0.53496"/> <atom id="1-KETO-2-METHYLVALERATE-atom5" elementType="O" x2="0.6065" y2="0.13496"/> <atom id="1-KETO-2-METHYLVALERATE-atom6" elementType="C" x2="0.6065" y2="-0.31382"/> <atom id="1-KETO-2-METHYLVALERATE-atom7" elementType="C" x2="-1.0" y2="-0.29431"/> <atom id="1-KETO-2-METHYLVALERATE-atom8" elementType="O" x2="-0.21301" y2="-0.7626"/> <atom id="1-KETO-2-METHYLVALERATE-atom9" elementType="C" x2="-0.21301" y2="-0.31382"/> <atom id="1-KETO-2-METHYLVALERATE-atom10" elementType="O" x2="0.19675" y2="-1.0"/> <bond id="1-KETO-2-METHYLVALERATE-bond1" atomRefs="1-KETO-2-METHYLVALERATE-atom10 1-KETO-2-METHYLVALERATE-atom3" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond2" atomRefs="1-KETO-2-METHYLVALERATE-atom9 1-KETO-2-METHYLVALERATE-atom3" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond3" atomRefs="1-KETO-2-METHYLVALERATE-atom8 1-KETO-2-METHYLVALERATE-atom9" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond4" atomRefs="1-KETO-2-METHYLVALERATE-atom7 1-KETO-2-METHYLVALERATE-atom1" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond5" atomRefs="1-KETO-2-METHYLVALERATE-atom6 1-KETO-2-METHYLVALERATE-atom3" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond6" atomRefs="1-KETO-2-METHYLVALERATE-atom5 1-KETO-2-METHYLVALERATE-atom6" order="2"/> <bond id="1-KETO-2-METHYLVALERATE-bond7" atomRefs="1-KETO-2-METHYLVALERATE-atom4 1-KETO-2-METHYLVALERATE-atom6" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond8" atomRefs="1-KETO-2-METHYLVALERATE-atom2 1-KETO-2-METHYLVALERATE-atom9" order="1"/> <bond id="1-KETO-2-METHYLVALERATE-bond9" atomRefs="1-KETO-2-METHYLVALERATE-atom1 1-KETO-2-METHYLVALERATE-atom9" order="1"/> <formula concise="C 6 H 12 O 4…

unificationXref22914
type: unificationXref
DB: CapCyc
ID: 1-KETO-2-METHYLVALERATE

unificationXref22913
type: unificationXref
DB: LIGAND
ID: C06007

unificationXref28870
type: unificationXref
DB: CapCyc
ID: ACETOOHBUTREDUCTOISOM-RXN

unificationXref28882
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-20

catalysis28876
type: catalysis
CONTROLLED: biochemicalReaction28869
CONTROLLER: phys-ent-participant28880
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28877

unificationXref28877
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-72

catalysis28871
type: catalysis
CONTROLLED: biochemicalReaction28869
CONTROLLER: phys-ent-participant28875
NAME: KETOL-ACID REDUCTOISOMERASE
XREF: unificationXref28872

unificationXref28872
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-741

catalysis28854
type: catalysis
CONTROLLED: biochemicalReaction28844
CONTROLLER: phys-ent-participant28858
NAME: cinnamyl alcohol dehydrogenase
XREF: unificationXref28855

biochemicalReaction28844
type: biochemicalReaction
EC-NUMBER: 1.1.1.195
LEFT: phys-ent-participant26766
LEFT: phys-ent-participant28849
NAME: Cinnamyl-alcohol dehydrogenase
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant28853
SYNONYMS: CAD
XREF: unificationXref28845

phys-ent-participant28849
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28846
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28846
type: smallMolecule
MOLECULAR-WEIGHT: 134.177
NAME: cinnamyl alcohol
STRUCTURE: chemicalStructure28848
SYNONYMS: cinnamic alcohol
XREF: unificationXref28847

chemicalStructure28848
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CINNAMYL-ALC-atom1" elementType="C" x2="-0.81575" y2="-1.0"/> <atom id="CINNAMYL-ALC-atom2" elementType="C" x2="-0.46064" y2="-0.38358"/> <atom id="CINNAMYL-ALC-atom3" elementType="C" x2="-1.0" y2="-0.69179"/> <atom id="CINNAMYL-ALC-atom4" elementType="C" x2="-0.46399" y2="-1.0"/> <atom id="CINNAMYL-ALC-atom5" elementType="C" x2="0.00503" y2="-0.87605"/> <atom id="CINNAMYL-ALC-atom6" elementType="C" x2="-0.81575" y2="-0.38358"/> <atom id="CINNAMYL-ALC-atom7" elementType="C" x2="-0.27973" y2="-0.69179"/> <atom id="CINNAMYL-ALC-atom8" elementType="O" x2="0.99665" y2="-0.69849"/> <atom id="CINNAMYL-ALC-atom9" elementType="C" x2="0.68509" y2="-0.89615"/> <atom id="CINNAMYL-ALC-atom10" elementType="C" x2="0.32663" y2="-0.67839"/> <bond id="CINNAMYL-ALC-bond1" atomRefs="CINNAMYL-ALC-atom10 CINNAMYL-ALC-atom9" order="1"/> <bond id="CINNAMYL-ALC-bond2" atomRefs="CINNAMYL-ALC-atom8 CINNAMYL-ALC-atom9" order="1"/> <bond id="CINNAMYL-ALC-bond3" atomRefs="CINNAMYL-ALC-atom7 CINNAMYL-ALC-atom5" order="1"/> <bond id="CINNAMYL-ALC-bond4" atomRefs="CINNAMYL-ALC-atom2 CINNAMYL-ALC-atom6" order="A"/> <bond id="CINNAMYL-ALC-bond5" atomRefs="CINNAMYL-ALC-atom5 CINNAMYL-ALC-atom10" order="2"/> <bond id="CINNAMYL-ALC-bond6" atomRefs="CINNAMYL-ALC-atom4 CINNAMYL-ALC-atom7" order="A"/> <bond id="CINNAMYL-ALC-bond7" atomRefs="CINNAMYL-ALC-atom3 CINNAMYL-ALC-atom1" order="A"/> <bond id="CINNAMYL-ALC-bond8" atomRefs="CINNAMYL-ALC-atom6 CINNAMYL-ALC-atom3" order="A"/> <bond id="CINNAMYL-ALC-bond9" atomRefs="CINNAMYL-ALC-atom7 CINNAMYL-ALC-atom2" order="A"/> <bond id="CINNAMYL-ALC-bond10" atomRefs="CINNAMYL-ALC-atom1 CINNAMYL-ALC-atom4" order="A"/> <formula concise="C 9 H 10 O 1" formalCharge="0"/> 134.177 C(O)C=Cc1(ccccc1)

unificationXref28847
type: unificationXref
DB: CapCyc
ID: CINNAMYL-ALC

phys-ent-participant28853
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28850
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28850
type: smallMolecule
MOLECULAR-WEIGHT: 132.162
NAME: cinnamaldehyde
STRUCTURE: chemicalStructure28852
XREF: unificationXref28851

chemicalStructure28852
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CINNAMALDEHYDE-atom1" elementType="C" x2="-0.81818" y2="-0.34545"/> <atom id="CINNAMALDEHYDE-atom2" elementType="H" x2="0.99669" y2="-1.0"/> <atom id="CINNAMALDEHYDE-atom3" elementType="C" x2="-0.28926" y2="-0.64959"/> <atom id="CINNAMALDEHYDE-atom4" elementType="C" x2="-0.46446" y2="-0.34545"/> <atom id="CINNAMALDEHYDE-atom5" elementType="C" x2="-0.00826" y2="-0.8314"/> <atom id="CINNAMALDEHYDE-atom6" elementType="O" x2="0.97025" y2="-0.6595"/> <atom id="CINNAMALDEHYDE-atom7" elementType="C" x2="0.30909" y2="-0.63967"/> <atom id="CINNAMALDEHYDE-atom8" elementType="C" x2="0.66281" y2="-0.85455"/> <atom id="CINNAMALDEHYDE-atom9" elementType="C" x2="-0.81818" y2="-0.95702"/> <atom id="CINNAMALDEHYDE-atom10" elementType="C" x2="-0.46777" y2="-0.95702"/> <atom id="CINNAMALDEHYDE-atom11" elementType="C" x2="-1.0" y2="-0.64959"/> <bond id="CINNAMALDEHYDE-bond1" atomRefs="CINNAMALDEHYDE-atom11 CINNAMALDEHYDE-atom9" order="A"/> <bond id="CINNAMALDEHYDE-bond2" atomRefs="CINNAMALDEHYDE-atom1 CINNAMALDEHYDE-atom11" order="A"/> <bond id="CINNAMALDEHYDE-bond3" atomRefs="CINNAMALDEHYDE-atom10 CINNAMALDEHYDE-atom3" order="A"/> <bond id="CINNAMALDEHYDE-bond4" atomRefs="CINNAMALDEHYDE-atom9 CINNAMALDEHYDE-atom10" order="A"/> <bond id="CINNAMALDEHYDE-bond5" atomRefs="CINNAMALDEHYDE-atom8 CINNAMALDEHYDE-atom2" order="1"/> <bond id="CINNAMALDEHYDE-bond6" atomRefs="CINNAMALDEHYDE-atom7 CINNAMALDEHYDE-atom8" order="1"/> <bond id="CINNAMALDEHYDE-bond7" atomRefs="CINNAMALDEHYDE-atom6 CINNAMALDEHYDE-atom8" order="2"/> <bond id="CINNAMALDEHYDE-bond8" atomRefs="CINNAMALDEHYDE-atom5 CINNAMALDEHYDE-atom7" order="2"/> <bond id="CINNAMALDEHYDE-bond9" atomRefs="CINNAMALDEHYDE-atom3 CINNAMALDEHYDE-atom4" order="A"/> <bond id="CINNAMALDEHYDE-bond10" atomRefs="CINNAMALDEHYDE-atom3 CINNAMALDEHYDE-atom5" order="1"/> <bond id="CINNAMALDEHYDE-bond11" atomRefs="CINNAMALDEHYDE-atom4 CINNAMALDEHYDE-atom1" order="A"/> <formula concise="C 9 H 8 O 1" formalCharge="0"/> 132.162 [CH](=O)C=Cc1(ccccc1)

unificationXref28851
type: unificationXref
DB: CapCyc
ID: CINNAMALDEHYDE

unificationXref28845
type: unificationXref
DB: CapCyc
ID: CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN

phys-ent-participant28858
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28856
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28856
type: protein
NAME: cinnamyl alcohol dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref28857

unificationXref28857
type: unificationXref
DB: CapCyc
ID: SGNU202369-MONOMER

unificationXref28855
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-563

catalysis28842
type: catalysis
CONTROLLED: biochemicalReaction28833
CONTROLLER: phys-ent-participant28623
NAME: DIHYDROFLAVONOL-4-REDUCTASE
XREF: unificationXref28843

biochemicalReaction28833
type: biochemicalReaction
EC-NUMBER: 1.1.1.219
LEFT: phys-ent-participant28379
LEFT: phys-ent-participant26766
NAME: Dihydrokaempferol 4-reductase
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant28129
SYNONYMS: NADPH-dihydromyricetin reductase
SYNONYMS: Dihydroflavonol 4-reductase
XREF: unificationXref28834

phys-ent-participant28379
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28376
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28376
type: smallMolecule
MOLECULAR-WEIGHT: 290.272
NAME: leucopelargonidin
STRUCTURE: chemicalStructure28378
SYNONYMS: cis 3,4-leucopelargonidin
XREF: unificationXref28377

chemicalStructure28378
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LEUCOPELARGONIDIN-CMPD-atom1" elementType="C" x2="-0.7780679" y2="0.48825067"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom2" elementType="O" x2="-0.56135774" y2="-0.15404701"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom3" elementType="C" x2="0.7754569" y2="0.8668407"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom4" elementType="O" x2="0.33159268" y2="0.10182768"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom5" elementType="C" x2="-0.56135774" y2="0.616188"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom6" elementType="O" x2="-0.11488247" y2="-0.15665793"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom7" elementType="C" x2="0.109660625" y2="0.22715402"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom8" elementType="O" x2="0.9973891" y2="0.997389"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom9" elementType="C" x2="0.55352485" y2="0.48825067"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom10" elementType="C" x2="0.55352485" y2="1.0"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom11" elementType="C" x2="-0.33681458" y2="0.229765"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom12" elementType="C" x2="-0.56135774" y2="0.10182768"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom13" elementType="O" x2="-1.0" y2="0.613577"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom14" elementType="C" x2="-0.7780679" y2="0.229765"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom15" elementType="O" x2="-0.11227155" y2="0.616188"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom16" elementType="C" x2="-0.33681458" y2="0.48825067"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom17" elementType="C" x2="-0.11488247" y2="0.09660572"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom18" elementType="C" x2="0.33420372" y2="0.616188"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom19" elementType="C" x2="0.11227155" y2="0.48825067"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom20" elementType="C" x2="0.7754569" y2="0.613577"/> <atom id="LEUCOPELARGONIDIN-CMPD-atom21" elementType="C" x2="0.33420372" y2="0.8720627"/> <bond id="LEUCOPELARGONIDIN-CMPD-bond1" atomRefs="LEUCOPELARGONIDIN-CMPD-atom21 LEUCOPELARGONIDIN-CMPD-atom18" order="A"/…

unificationXref28377
type: unificationXref
DB: CapCyc
ID: LEUCOPELARGONIDIN-CMPD

phys-ent-participant28129
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28125
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28125
type: smallMolecule
MOLECULAR-WEIGHT: 288.256
NAME: dihydrokaempferol
STRUCTURE: chemicalStructure28128
SYNONYMS: aromadendrin
SYNONYMS: (+)-aromadendrin
SYNONYMS: (+)-Dihydrokaempferol
XREF: unificationXref28127
XREF: unificationXref28126

chemicalStructure28128
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DIHYDROKAEMPFEROL-CMPD-atom1" elementType="C" x2="0.55407643" y2="-1.0"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom2" elementType="C" x2="0.7770382" y2="-0.8702163"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom3" elementType="O" x2="-1.0" y2="-0.6139767"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom4" elementType="C" x2="-0.11148089" y2="-0.10149753"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom5" elementType="C" x2="0.55407643" y2="-0.4908486"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom6" elementType="C" x2="-0.33444262" y2="-0.23128122"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom7" elementType="O" x2="-0.55740434" y2="0.15141428"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom8" elementType="O" x2="-0.11148089" y2="-0.6173045"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom9" elementType="C" x2="0.33444262" y2="-0.8702163"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom10" elementType="C" x2="-0.33444262" y2="-0.4875208"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom11" elementType="C" x2="-0.55740434" y2="-0.6173045"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom12" elementType="O" x2="0.33444262" y2="-0.10149753"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom13" elementType="C" x2="0.33444262" y2="-0.6173045"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom14" elementType="C" x2="-0.78036606" y2="-0.23128122"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom15" elementType="C" x2="0.11480856" y2="-0.4908486"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom16" elementType="C" x2="0.7770382" y2="-0.6173045"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom17" elementType="O" x2="-0.11148089" y2="0.154742"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom18" elementType="C" x2="-0.55740434" y2="-0.10482532"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom19" elementType="C" x2="0.11148083" y2="-0.22795343"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom20" elementType="C" x2="-0.78036606" y2="-0.4875208"/> <atom id="DIHYDROKAEMPFEROL-CMPD-atom21" elementType="O" x2="0.99667215" y2="-0.9966722"/> <bond id="DIHYDROKAEMPFEROL-CMPD-bond1" atomRefs="DIHYDROKAEMPFEROL-CMPD-atom21 DIHYDROKAEMPFEROL-…

unificationXref28127
type: unificationXref
DB: CapCyc
ID: DIHYDROKAEMPFEROL-CMPD

unificationXref28126
type: unificationXref
DB: CAS
ID: 480-20-6

unificationXref28834
type: unificationXref
DB: CapCyc
ID: DIHYDROKAEMPFEROL-4-REDUCTASE-RXN

phys-ent-participant28623
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28621
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28621
type: protein
NAME: DIHYDROFLAVONOL-4-REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref28622

unificationXref28622
type: unificationXref
DB: CapCyc
ID: SGNU197269-MONOMER

unificationXref28843
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-167

catalysis28840
type: catalysis
CONTROLLED: biochemicalReaction28833
CONTROLLER: phys-ent-participant28618
NAME: DIHYDROFLAVONOL 4-REDUCTASE
XREF: unificationXref28841

phys-ent-participant28618
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28616
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28616
type: protein
NAME: DIHYDROFLAVONOL 4-REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref28617

unificationXref28617
type: unificationXref
DB: CapCyc
ID: SGNU202887-MONOMER

unificationXref28841
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-587

catalysis28835
type: catalysis
CONTROLLED: biochemicalReaction28833
CONTROLLER: phys-ent-participant28839
NAME: DIHYDROKAEMPFEROL 4-REDUCTASE
XREF: unificationXref28836

phys-ent-participant28839
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28837
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28837
type: protein
NAME: DIHYDROKAEMPFEROL 4-REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref28838

unificationXref28838
type: unificationXref
DB: CapCyc
ID: SGNU203162-MONOMER

unificationXref28836
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-600

catalysis28818
type: catalysis
CONTROLLED: biochemicalReaction28816
CONTROLLER: phys-ent-participant28822
NAME: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
XREF: unificationXref28819

biochemicalReaction28816
type: biochemicalReaction
EC-NUMBER: 1.1.1.267
LEFT: phys-ent-participant25065
LEFT: phys-ent-participant26766
NAME: DXPREDISOM-RXN
RIGHT: phys-ent-participant25438
RIGHT: phys-ent-participant26753
XREF: unificationXref28817

phys-ent-participant25065
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25061
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25061
type: smallMolecule
MOLECULAR-WEIGHT: 216.127
NAME: 2-C-methyl-D-erythritol-4-phosphate
STRUCTURE: chemicalStructure25064
SYNONYMS: MEP
XREF: unificationXref25063
XREF: unificationXref25062

chemicalStructure25064
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom1" elementType="O" x2="0.67666674" y2="-0.120000005"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom2" elementType="C" x2="0.03666675" y2="-0.73333335"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom3" elementType="P" x2="0.67666674" y2="-0.45333332"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom4" elementType="C" x2="-0.38666666" y2="-0.45333332"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom5" elementType="C" x2="-0.7166667" y2="-0.73333335"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom6" elementType="O" x2="0.67666674" y2="-0.73333335"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom7" elementType="O" x2="0.99666667" y2="-0.45333332"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom8" elementType="O" x2="-1.0" y2="-0.120000005"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom9" elementType="O" x2="-0.38666666" y2="-0.120000005"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom10" elementType="O" x2="-0.49333334" y2="-1.0"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom11" elementType="C" x2="-0.9533333" y2="-1.0"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom12" elementType="C" x2="-1.0" y2="-0.45333332"/> <atom id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom13" elementType="O" x2="0.35333335" y2="-0.45333332"/> <bond id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-bond1" atomRefs="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom13 2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom3" order="1"/> <bond id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-bond2" atomRefs="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom12 2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom5" order="1"/> <bond id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-bond3" atomRefs="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom8 2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom12" order="1"/> <bond id="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-bond4" atomRefs="2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom5 2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE-atom11" order="1"/> <bond id="2-C-METHYL…

unificationXref25063
type: unificationXref
DB: CapCyc
ID: 2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE

unificationXref25062
type: unificationXref
DB: LIGAND
ID: C11434

phys-ent-participant25438
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25434
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25434
type: smallMolecule
MOLECULAR-WEIGHT: 214.111
NAME: 1-deoxy-D-xylulose 5-phosphate
STRUCTURE: chemicalStructure25437
SYNONYMS: DXP
SYNONYMS: deoxyxylulose-5-phosphate
SYNONYMS: D-1-deoxyxylulose-5-P
SYNONYMS: 1-deoxy-D-threo-pentulose 5-phosphate
SYNONYMS: DOXP
XREF: unificationXref25436
XREF: unificationXref25435

chemicalStructure25437
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DEOXYXYLULOSE-5P-atom1" elementType="C" x2="-0.45410627" y2="0.5603865"/> <atom id="DEOXYXYLULOSE-5P-atom2" elementType="O" x2="0.5072464" y2="1.0"/> <atom id="DEOXYXYLULOSE-5P-atom3" elementType="C" x2="-0.45410627" y2="-0.21739125"/> <atom id="DEOXYXYLULOSE-5P-atom4" elementType="C" x2="-0.45410627" y2="-0.60386467"/> <atom id="DEOXYXYLULOSE-5P-atom5" elementType="O" x2="0.5072464" y2="0.11594206"/> <atom id="DEOXYXYLULOSE-5P-atom6" elementType="O" x2="0.009661794" y2="0.17391306"/> <atom id="DEOXYXYLULOSE-5P-atom7" elementType="O" x2="0.0869565" y2="0.5603865"/> <atom id="DEOXYXYLULOSE-5P-atom8" elementType="O" x2="0.009661794" y2="-0.60386467"/> <atom id="DEOXYXYLULOSE-5P-atom9" elementType="O" x2="0.9516908" y2="0.5603865"/> <atom id="DEOXYXYLULOSE-5P-atom10" elementType="C" x2="-0.45410627" y2="-0.99516904"/> <atom id="DEOXYXYLULOSE-5P-atom11" elementType="P" x2="0.5072464" y2="0.5603865"/> <atom id="DEOXYXYLULOSE-5P-atom12" elementType="C" x2="-0.45410627" y2="0.17391306"/> <atom id="DEOXYXYLULOSE-5P-atom13" elementType="O" x2="-1.0" y2="-0.21739125"/> <bond id="DEOXYXYLULOSE-5P-bond1" atomRefs="DEOXYXYLULOSE-5P-atom13 DEOXYXYLULOSE-5P-atom3" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond2" atomRefs="DEOXYXYLULOSE-5P-atom12 DEOXYXYLULOSE-5P-atom1" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond3" atomRefs="DEOXYXYLULOSE-5P-atom10 DEOXYXYLULOSE-5P-atom4" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond4" atomRefs="DEOXYXYLULOSE-5P-atom9 DEOXYXYLULOSE-5P-atom11" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond5" atomRefs="DEOXYXYLULOSE-5P-atom8 DEOXYXYLULOSE-5P-atom4" order="2"/> <bond id="DEOXYXYLULOSE-5P-bond6" atomRefs="DEOXYXYLULOSE-5P-atom7 DEOXYXYLULOSE-5P-atom11" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond7" atomRefs="DEOXYXYLULOSE-5P-atom6 DEOXYXYLULOSE-5P-atom12" order="1"/> <bond id="DEOXYXYLULOSE-5P-bond8" atomRefs="DEOXYXYLULOSE-5P-atom5 DEOXYXYLULOSE-5P-atom11" order="2"/> <bond id="DEOXYXYLULOSE-5P-bond9" atomRefs="DEOXYXYLULOSE-5P-atom4 DEOXYXYLULOSE-5P…

unificationXref25436
type: unificationXref
DB: CapCyc
ID: DEOXYXYLULOSE-5P

unificationXref25435
type: unificationXref
DB: LIGAND
ID: C11437

unificationXref28817
type: unificationXref
DB: CapCyc
ID: DXPREDISOM-RXN

phys-ent-participant28822
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28820
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28820
type: protein
NAME: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
ORGANISM: bioSource20982
XREF: unificationXref28821

unificationXref28821
type: unificationXref
DB: CapCyc
ID: SGNU196785-MONOMER

unificationXref28819
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-104

catalysis28811
type: catalysis
CONTROLLED: biochemicalReaction28799
CONTROLLER: phys-ent-participant28815
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28812

biochemicalReaction28799
type: biochemicalReaction
EC-NUMBER: 1.1.1.49
LEFT: phys-ent-participant21902
LEFT: phys-ent-participant26027
NAME: Glucose-6-phosphate 1-dehydrogenase
RIGHT: phys-ent-participant24802
RIGHT: phys-ent-participant26019
SYNONYMS: G6PD
XREF: unificationXref28800

phys-ent-participant21902
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21897
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21897
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: beta-D-glucose-6-phosphate
STRUCTURE: chemicalStructure21901
SYNONYMS: D-glucose-6-P
SYNONYMS: glucose-6-P
SYNONYMS: glucose-6-phosphate
SYNONYMS: β-D-glucose-6-P
SYNONYMS: D-glucose-6-phosphate
XREF: unificationXref21900
XREF: unificationXref21899
XREF: unificationXref21898

chemicalStructure21901
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLC-6-P-atom1" elementType="C" x2="2.7292" y2="3.2292"/> <atom id="GLC-6-P-atom2" elementType="C" x2="2.7292" y2="3.9875"/> <atom id="GLC-6-P-atom3" elementType="C" x2="3.3787" y2="4.3708"/> <atom id="GLC-6-P-atom4" elementType="C" x2="4.0365" y2="3.9875"/> <atom id="GLC-6-P-atom5" elementType="C" x2="4.0365" y2="3.2292"/> <atom id="GLC-6-P-atom6" elementType="O" x2="3.3787" y2="2.8542"/> <atom id="GLC-6-P-atom7" elementType="C" x2="2.0796" y2="2.8542"/> <atom id="GLC-6-P-atom8" elementType="O" x2="4.685" y2="2.8524"/> <atom id="GLC-6-P-atom9" elementType="O" x2="3.3766" y2="5.1208"/> <atom id="GLC-6-P-atom10" elementType="O" x2="2.0779" y2="4.3594"/> <atom id="GLC-6-P-atom11" elementType="O" x2="4.6868" y2="4.3612"/> <atom id="GLC-6-P-atom12" elementType="O" x2="1.4301" y2="3.2292"/> <atom id="GLC-6-P-atom13" elementType="P" x2="0.6792" y2="3.2292"/> <atom id="GLC-6-P-atom14" elementType="O" x2="-0.0708" y2="3.2292"/> <atom id="GLC-6-P-atom15" elementType="O" x2="0.6792" y2="2.4792"/> <atom id="GLC-6-P-atom16" elementType="O" x2="0.6782" y2="3.9792"/> <bond id="GLC-6-P-bond1" atomRefs="GLC-6-P-atom13 GLC-6-P-atom16" order="2"/> <bond id="GLC-6-P-bond2" atomRefs="GLC-6-P-atom13 GLC-6-P-atom15" order="1"/> <bond id="GLC-6-P-bond3" atomRefs="GLC-6-P-atom13 GLC-6-P-atom14" order="1"/> <bond id="GLC-6-P-bond4" atomRefs="GLC-6-P-atom12 GLC-6-P-atom13" order="1"/> <bond id="GLC-6-P-bond5" atomRefs="GLC-6-P-atom7 GLC-6-P-atom12" order="1"/> <bond id="GLC-6-P-bond6" atomRefs="GLC-6-P-atom4 GLC-6-P-atom11" order="1"/> <bond id="GLC-6-P-bond7" atomRefs="GLC-6-P-atom2 GLC-6-P-atom10" order="1"/> <bond id="GLC-6-P-bond8" atomRefs="GLC-6-P-atom3 GLC-6-P-atom9" order="1"/> <bond id="GLC-6-P-bond9" atomRefs="GLC-6-P-atom8 GLC-6-P-atom5" order="1"/> <bond id="GLC-6-P-bond10" atomRefs="GLC-6-P-atom1 GLC-6-P-atom7" order="1"/> <bond id="GLC-6-P-bond11" atomRefs="GLC-6-P-atom5 GLC-6-P-atom6" order="1"/> <bond id="GLC-6-P-bond12" atomRefs="GLC-6-P-atom4 GLC-6-P-atom5" order="…

unificationXref21900
type: unificationXref
DB: CapCyc
ID: GLC-6-P

unificationXref21899
type: unificationXref
DB: CAS
ID: 56-73-5

unificationXref21898
type: unificationXref
DB: LIGAND
ID: C00092

phys-ent-participant24802
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24797
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24797
type: smallMolecule
MOLECULAR-WEIGHT: 258.121
NAME: D-glucono-delta-lactone-6-phosphate
STRUCTURE: chemicalStructure24801
SYNONYMS: 6-phosphogluconolactone
SYNONYMS: D-6-phosphoglucono-δ-lactone
SYNONYMS: D-6-P-glucono-δ-lactone
SYNONYMS: D-glucono-1,5-lactone-6-phosphate
SYNONYMS: 6-phospho-D-glucono-1,5-lactone
SYNONYMS: D-6-phospho-glucono-δ-lactone
XREF: unificationXref24800
XREF: unificationXref24799
XREF: unificationXref24798

chemicalStructure24801
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom1" elementType="C" x2="-0.67974" y2="0.34641"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom2" elementType="O" x2="-0.39869" y2="0.61111"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom3" elementType="O" x2="0.39542" y2="0.61111"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom4" elementType="C" x2="0.28105" y2="-0.35621"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom5" elementType="P" x2="0.0098" y2="0.61111"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom6" elementType="O" x2="-0.04902" y2="0.07843"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom7" elementType="C" x2="-0.04902" y2="-0.76797"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom8" elementType="O" x2="0.66667" y2="-0.35621"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom9" elementType="O" x2="0.0098" y2="0.22549"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom10" elementType="H" x2="-0.67974" y2="-0.15359"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom11" elementType="C" x2="-1.0" y2="-0.35621"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom12" elementType="H" x2="-1.0" y2="-0.12418"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom13" elementType="C" x2="-0.67974" y2="-0.76797"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom14" elementType="O" x2="-0.04902" y2="-1.0"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom15" elementType="O" x2="0.0098" y2="0.99673"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom16" elementType="C" x2="-0.67974" y2="0.07843"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom17" elementType="O" x2="-1.0" y2="-0.58824"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom18" elementType="H" x2="-0.04902" y2="-0.53595"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom19" elementType="O" x2="-0.67974" y2="-0.53595"/> <atom id="D-6-P-GLUCONO-DELTA-LACTONE-atom20" elementType="H" x2="-0.67974" y2="-1.0"/> <bond id="D-6-P-GLUCONO-DELTA-LACTONE-bond1" atomRefs="D-6-P-GLUCONO-DELTA-LACTONE-atom20 D-6-P-GLUCONO-DELTA-LACTONE-atom13" order="1"/> <bond id="D-6-P-GLUCONO-DELTA-LACTONE-bond2" atomRefs="D-6-P-GLUCONO…

unificationXref24800
type: unificationXref
DB: CapCyc
ID: D-6-P-GLUCONO-DELTA-LACTONE

unificationXref24799
type: unificationXref
DB: CAS
ID: 2641-81-8

unificationXref24798
type: unificationXref
DB: LIGAND
ID: C01236

unificationXref28800
type: unificationXref
DB: CapCyc
ID: GLU6PDEHYDROG-RXN

phys-ent-participant28815
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28813
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28813
type: protein
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28814

unificationXref28814
type: unificationXref
DB: CapCyc
ID: SGNU196551-MONOMER

unificationXref28812
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-68

catalysis28806
type: catalysis
CONTROLLED: biochemicalReaction28799
CONTROLLER: phys-ent-participant28810
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28807

phys-ent-participant28810
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28808
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28808
type: protein
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28809

unificationXref28809
type: unificationXref
DB: CapCyc
ID: SGNU199716-MONOMER

unificationXref28807
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-372

catalysis28801
type: catalysis
CONTROLLED: biochemicalReaction28799
CONTROLLER: phys-ent-participant28805
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28802

phys-ent-participant28805
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28803
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28803
type: protein
NAME: GLUCOSE-6-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28804

unificationXref28804
type: unificationXref
DB: CapCyc
ID: SGNU200425-MONOMER

unificationXref28802
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-423

catalysis28791
type: catalysis
CONTROLLED: biochemicalReaction28787
CONTROLLER: phys-ent-participant28757
NAME: hydroxypyruvate reductase
XREF: unificationXref28792

biochemicalReaction28787
type: biochemicalReaction
EC-NUMBER: 1.1.1.29
LEFT: phys-ent-participant25635
LEFT: phys-ent-participant27218
NAME: Glycerate dehydrogenase
RIGHT: phys-ent-participant25744
RIGHT: phys-ent-participant27230
SYNONYMS: Hydroxypyruvate dehydrogenase
SYNONYMS: Hydroxypyruvate reductase
XREF: unificationXref28788

phys-ent-participant25635
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25629
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25629
type: smallMolecule
MOLECULAR-WEIGHT: 106.078
NAME: glycerate
STRUCTURE: chemicalStructure25634
SYNONYMS: (R)-glycerate
SYNONYMS: D-glycerate
XREF: unificationXref25633
XREF: unificationXref25632
XREF: unificationXref25631
XREF: unificationXref25630

chemicalStructure25634
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLYCERATE-atom1" elementType="O" x2="-0.4163" y2="0.99704"/> <atom id="GLYCERATE-atom2" elementType="C" x2="0.03704" y2="-0.01926"/> <atom id="GLYCERATE-atom3" elementType="O" x2="-0.4163" y2="-1.0"/> <atom id="GLYCERATE-atom4" elementType="O" x2="-1.0" y2="0.41333"/> <atom id="GLYCERATE-atom5" elementType="C" x2="-0.4163" y2="-0.4163"/> <atom id="GLYCERATE-atom6" elementType="C" x2="-0.4163" y2="0.41333"/> <atom id="GLYCERATE-atom7" elementType="O" x2="0.62074" y2="-0.01926"/> <bond id="GLYCERATE-bond1" atomRefs="GLYCERATE-atom6 GLYCERATE-atom2" order="1"/> <bond id="GLYCERATE-bond2" atomRefs="GLYCERATE-atom6 GLYCERATE-atom4" order="1"/> <bond id="GLYCERATE-bond3" atomRefs="GLYCERATE-atom5 GLYCERATE-atom3" order="1"/> <bond id="GLYCERATE-bond4" atomRefs="GLYCERATE-atom5 GLYCERATE-atom2" order="1"/> <bond id="GLYCERATE-bond5" atomRefs="GLYCERATE-atom2 GLYCERATE-atom7" order="1"/> <bond id="GLYCERATE-bond6" atomRefs="GLYCERATE-atom1 GLYCERATE-atom6" order="2"/> <formula concise="C 3 H 6 O 4" formalCharge="0"/> 106.078 C(O)C(O)C(O)=O

unificationXref25633
type: unificationXref
DB: CapCyc
ID: GLYCERATE

unificationXref25632
type: unificationXref
DB: CAS
ID: 6000-40-4

unificationXref25631
type: unificationXref
DB: LIGAND
ID: C00258

unificationXref25630
type: unificationXref
DB: CAS
ID: 473-81-4

phys-ent-participant25744
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25739
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25739
type: smallMolecule
MOLECULAR-WEIGHT: 104.062
NAME: hydroxypyruvate
STRUCTURE: chemicalStructure25743
SYNONYMS: OH-pyruvate
SYNONYMS: OH-pyr
SYNONYMS: 3-hydroxypyruvate
XREF: unificationXref25742
XREF: unificationXref25741
XREF: unificationXref25740

chemicalStructure25743
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OH-PYR-atom1" elementType="C" x2="-0.04974" y2="-0.9554"/> <atom id="OH-PYR-atom2" elementType="O" x2="-0.04974" y2="-0.40652"/> <atom id="OH-PYR-atom3" elementType="C" x2="0.52316" y2="-0.65695"/> <atom id="OH-PYR-atom4" elementType="C" x2="-0.56432" y2="-0.66724"/> <atom id="OH-PYR-atom5" elementType="O" x2="0.99657" y2="-0.93139"/> <atom id="OH-PYR-atom6" elementType="O" x2="0.52316" y2="-0.10806"/> <atom id="OH-PYR-atom7" elementType="O" x2="-1.0" y2="-1.0"/> <bond id="OH-PYR-bond1" atomRefs="OH-PYR-atom7 OH-PYR-atom4" order="1"/> <bond id="OH-PYR-bond2" atomRefs="OH-PYR-atom6 OH-PYR-atom3" order="2"/> <bond id="OH-PYR-bond3" atomRefs="OH-PYR-atom5 OH-PYR-atom3" order="1"/> <bond id="OH-PYR-bond4" atomRefs="OH-PYR-atom4 OH-PYR-atom1" order="1"/> <bond id="OH-PYR-bond5" atomRefs="OH-PYR-atom3 OH-PYR-atom1" order="1"/> <bond id="OH-PYR-bond6" atomRefs="OH-PYR-atom2 OH-PYR-atom1" order="2"/> <formula concise="C 3 H 4 O 4" formalCharge="0"/> 104.062 C(O)(=O)C(=O)CO

unificationXref25742
type: unificationXref
DB: CapCyc
ID: OH-PYR

unificationXref25741
type: unificationXref
DB: CAS
ID: 1113-60-6

unificationXref25740
type: unificationXref
DB: LIGAND
ID: C00168

unificationXref28788
type: unificationXref
DB: CapCyc
ID: GLYCERATE-DEHYDROGENASE-RXN

phys-ent-participant28757
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28755
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28755
type: protein
NAME: hydroxypyruvate reductase
ORGANISM: bioSource20982
XREF: unificationXref28756

unificationXref28756
type: unificationXref
DB: CapCyc
ID: SGNU196949-MONOMER

unificationXref28792
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-128

catalysis28789
type: catalysis
CONTROLLED: biochemicalReaction28787
CONTROLLER: phys-ent-participant28752
NAME: hydroxypyruvate reductase
XREF: unificationXref28790

phys-ent-participant28752
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28750
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28750
type: protein
NAME: hydroxypyruvate reductase
ORGANISM: bioSource20982
XREF: unificationXref28751

unificationXref28751
type: unificationXref
DB: CapCyc
ID: SGNU203938-MONOMER

unificationXref28790
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-648

catalysis28785
type: catalysis
CONTROLLED: biochemicalReaction28776
CONTROLLER: phys-ent-participant28775
NAME: HISTIDINOL DEHYDROGENASE
XREF: unificationXref28786

biochemicalReaction28776
type: biochemicalReaction
EC-NUMBER: 1.1.1.23
LEFT: phys-ent-participant28770
LEFT: phys-ent-participant27218
LEFT: phys-ent-participant20951
NAME: Histidinol dehydrogenase
RIGHT: phys-ent-participant28784
RIGHT: phys-ent-participant27230
XREF: unificationXref28777

phys-ent-participant28770
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28767
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28767
type: smallMolecule
MOLECULAR-WEIGHT: 139.157
NAME: histidinal
STRUCTURE: chemicalStructure28769
SYNONYMS: L-histidinal
XREF: unificationXref28768

chemicalStructure28769
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HISTIDINAL-atom1" elementType="C" x2="-0.2765957" y2="-0.027355611"/> <atom id="HISTIDINAL-atom2" elementType="O" x2="0.9969605" y2="-0.45288754"/> <atom id="HISTIDINAL-atom3" elementType="C" x2="-1.0" y2="-0.027355611"/> <atom id="HISTIDINAL-atom4" elementType="N" x2="0.34954405" y2="-0.32826746"/> <atom id="HISTIDINAL-atom5" elementType="H" x2="0.34954405" y2="-1.0"/> <atom id="HISTIDINAL-atom6" elementType="C" x2="-0.024316072" y2="-0.74772036"/> <atom id="HISTIDINAL-atom7" elementType="N" x2="-1.0" y2="-0.4832827"/> <atom id="HISTIDINAL-atom8" elementType="H" x2="-0.62917936" y2="0.6261399"/> <atom id="HISTIDINAL-atom9" elementType="N" x2="-0.6352583" y2="0.25531912"/> <atom id="HISTIDINAL-atom10" elementType="C" x2="0.34954405" y2="-0.74772036"/> <atom id="HISTIDINAL-atom11" elementType="C" x2="0.69300914" y2="-0.74772036"/> <atom id="HISTIDINAL-atom12" elementType="C" x2="-0.2765957" y2="-0.4832827"/> <bond id="HISTIDINAL-bond1" atomRefs="HISTIDINAL-atom12 HISTIDINAL-atom7" order="A"/> <bond id="HISTIDINAL-bond2" atomRefs="HISTIDINAL-atom11 HISTIDINAL-atom10" order="1"/> <bond id="HISTIDINAL-bond3" atomRefs="HISTIDINAL-atom10 HISTIDINAL-atom5" order="1"/> <bond id="HISTIDINAL-bond4" atomRefs="HISTIDINAL-atom10 HISTIDINAL-atom4" order="1"/> <bond id="HISTIDINAL-bond5" atomRefs="HISTIDINAL-atom9 HISTIDINAL-atom1" order="A"/> <bond id="HISTIDINAL-bond6" atomRefs="HISTIDINAL-atom8 HISTIDINAL-atom9" order="1"/> <bond id="HISTIDINAL-bond7" atomRefs="HISTIDINAL-atom7 HISTIDINAL-atom3" order="A"/> <bond id="HISTIDINAL-bond8" atomRefs="HISTIDINAL-atom6 HISTIDINAL-atom10" order="1"/> <bond id="HISTIDINAL-bond9" atomRefs="HISTIDINAL-atom6 HISTIDINAL-atom12" order="1"/> <bond id="HISTIDINAL-bond10" atomRefs="HISTIDINAL-atom3 HISTIDINAL-atom9" order="A"/> <bond id="HISTIDINAL-bond11" atomRefs="HISTIDINAL-atom2 HISTIDINAL-atom11" order="2"/> <bond id="HISTIDINAL-bond12" atomRefs="HISTIDINAL-atom1 HISTIDINAL-atom12" order="A"/> <formula concise="C 6 H 9 N 3 O 1" fo…

unificationXref28768
type: unificationXref
DB: CapCyc
ID: HISTIDINAL

phys-ent-participant28784
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28778
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28778
type: smallMolecule
MOLECULAR-WEIGHT: 155.156
NAME: L-histidine
STRUCTURE: chemicalStructure28783
SYNONYMS: L-histidine
SYNONYMS: glyoxaline-5-alanine
SYNONYMS: α-amino-4-imidazoleproprionic acid
SYNONYMS: (S)-α-amino-1H-imidazole-4-propanoic acid
SYNONYMS: H
SYNONYMS: histidine
SYNONYMS: his
XREF: unificationXref28782
XREF: unificationXref28781
XREF: unificationXref28780
XREF: unificationXref28779

chemicalStructure28783
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HIS-atom1" elementType="N" x2="-0.6342857" y2="0.22857143"/> <atom id="HIS-atom2" elementType="H" x2="-0.6314286" y2="0.4857143"/> <atom id="HIS-atom3" elementType="C" x2="-0.2742857" y2="-0.44285715"/> <atom id="HIS-atom4" elementType="H" x2="0.35428572" y2="-0.91714287"/> <atom id="HIS-atom5" elementType="N" x2="-1.0" y2="-0.44285715"/> <atom id="HIS-atom6" elementType="C" x2="0.7" y2="-0.68"/> <atom id="HIS-atom7" elementType="C" x2="-0.2742857" y2="-0.03142857"/> <atom id="HIS-atom8" elementType="C" x2="0.35428572" y2="-0.68"/> <atom id="HIS-atom9" elementType="C" x2="-0.022857143" y2="-0.68"/> <atom id="HIS-atom10" elementType="N" x2="0.35428572" y2="-0.2857143"/> <atom id="HIS-atom11" elementType="O" x2="0.9285714" y2="-1.0"/> <atom id="HIS-atom12" elementType="C" x2="-1.0" y2="-0.03142857"/> <atom id="HIS-atom13" elementType="O" x2="0.99714285" y2="-0.42"/> <bond id="HIS-bond1" atomRefs="HIS-atom13 HIS-atom6" order="2"/> <bond id="HIS-bond2" atomRefs="HIS-atom12 HIS-atom5" order="A"/> <bond id="HIS-bond3" atomRefs="HIS-atom11 HIS-atom6" order="1"/> <bond id="HIS-bond4" atomRefs="HIS-atom9 HIS-atom8" order="1"/> <bond id="HIS-bond5" atomRefs="HIS-atom9 HIS-atom3" order="1"/> <bond id="HIS-bond6" atomRefs="HIS-atom8 HIS-atom4" order="1"/> <bond id="HIS-bond7" atomRefs="HIS-atom8 HIS-atom10" order="1"/> <bond id="HIS-bond8" atomRefs="HIS-atom7 HIS-atom1" order="A"/> <bond id="HIS-bond9" atomRefs="HIS-atom6 HIS-atom8" order="1"/> <bond id="HIS-bond10" atomRefs="HIS-atom5 HIS-atom3" order="A"/> <bond id="HIS-bond11" atomRefs="HIS-atom3 HIS-atom7" order="A"/> <bond id="HIS-bond12" atomRefs="HIS-atom2 HIS-atom1" order="1"/> <bond id="HIS-bond13" atomRefs="HIS-atom1 HIS-atom12" order="A"/> <formula concise="C 6 H 9 N 3 O 2" formalCharge="0"/> 155.156 C(O)(=O)[CH](N)Cc1(nc[nH]c1)

unificationXref28782
type: unificationXref
DB: CapCyc
ID: HIS

unificationXref28781
type: unificationXref
DB: CAS
ID: 7006-35-1

unificationXref28780
type: unificationXref
DB: CAS
ID: 71-00-1

unificationXref28779
type: unificationXref
DB: LIGAND
ID: C00135

unificationXref28777
type: unificationXref
DB: CapCyc
ID: HISTALDEHYD-RXN

phys-ent-participant28775
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28773
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28773
type: protein
NAME: HISTIDINOL DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28774

unificationXref28774
type: unificationXref
DB: CapCyc
ID: SGNU201519-MONOMER

unificationXref28786
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-495

catalysis28771
type: catalysis
CONTROLLED: biochemicalReaction28765
CONTROLLER: phys-ent-participant28775
NAME: HISTIDINOL DEHYDROGENASE
XREF: unificationXref28772

biochemicalReaction28765
type: biochemicalReaction
EC-NUMBER: 1.1.1.23
LEFT: phys-ent-participant24505
LEFT: phys-ent-participant27218
NAME: Histidinol dehydrogenase
RIGHT: phys-ent-participant28770
RIGHT: phys-ent-participant27230
XREF: unificationXref28766

phys-ent-participant24505
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24500
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24500
type: smallMolecule
MOLECULAR-WEIGHT: 141.172
NAME: histidinol
STRUCTURE: chemicalStructure24504
SYNONYMS: histidol
SYNONYMS: histidinol
SYNONYMS: L-histidinol
XREF: unificationXref24503
XREF: unificationXref24502
XREF: unificationXref24501

chemicalStructure24504
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HISTIDINOL-atom1" elementType="C" x2="0.36389685" y2="-0.8080229"/> <atom id="HISTIDINOL-atom2" elementType="C" x2="0.9971347" y2="-0.6246418"/> <atom id="HISTIDINOL-atom3" elementType="C" x2="0.36389685" y2="-0.41547275"/> <atom id="HISTIDINOL-atom4" elementType="C" x2="-0.27793694" y2="-0.78223497"/> <atom id="HISTIDINOL-atom5" elementType="H" x2="0.71919775" y2="0.04011464"/> <atom id="HISTIDINOL-atom6" elementType="C" x2="-0.6475645" y2="-0.9197708"/> <atom id="HISTIDINOL-atom7" elementType="N" x2="0.71919775" y2="-0.26934093"/> <atom id="HISTIDINOL-atom8" elementType="N" x2="-0.27793694" y2="-0.4011461"/> <atom id="HISTIDINOL-atom9" elementType="O" x2="-1.0" y2="-0.76504296"/> <atom id="HISTIDINOL-atom10" elementType="N" x2="0.7277938" y2="-1.0"/> <atom id="HISTIDINOL-atom11" elementType="C" x2="0.037249327" y2="-0.9369627"/> <bond id="HISTIDINOL-bond1" atomRefs="HISTIDINOL-atom11 HISTIDINOL-atom1" order="1"/> <bond id="HISTIDINOL-bond2" atomRefs="HISTIDINOL-atom10 HISTIDINOL-atom1" order="A"/> <bond id="HISTIDINOL-bond3" atomRefs="HISTIDINOL-atom9 HISTIDINOL-atom6" order="1"/> <bond id="HISTIDINOL-bond4" atomRefs="HISTIDINOL-atom8 HISTIDINOL-atom4" order="1"/> <bond id="HISTIDINOL-bond5" atomRefs="HISTIDINOL-atom7 HISTIDINOL-atom2" order="A"/> <bond id="HISTIDINOL-bond6" atomRefs="HISTIDINOL-atom6 HISTIDINOL-atom4" order="1"/> <bond id="HISTIDINOL-bond7" atomRefs="HISTIDINOL-atom5 HISTIDINOL-atom7" order="1"/> <bond id="HISTIDINOL-bond8" atomRefs="HISTIDINOL-atom4 HISTIDINOL-atom11" order="1"/> <bond id="HISTIDINOL-bond9" atomRefs="HISTIDINOL-atom3 HISTIDINOL-atom7" order="A"/> <bond id="HISTIDINOL-bond10" atomRefs="HISTIDINOL-atom2 HISTIDINOL-atom10" order="A"/> <bond id="HISTIDINOL-bond11" atomRefs="HISTIDINOL-atom1 HISTIDINOL-atom3" order="A"/> <formula concise="C 6 H 11 N 3 O 1" formalCharge="0"/> 141.172 c1(c(nc[nH]1)CC(N)CO)

unificationXref24503
type: unificationXref
DB: CapCyc
ID: HISTIDINOL

unificationXref24502
type: unificationXref
DB: CAS
ID: 501-28-0

unificationXref24501
type: unificationXref
DB: LIGAND
ID: C00860

unificationXref28766
type: unificationXref
DB: CapCyc
ID: HISTOLDEHYD-RXN

unificationXref28772
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-496

catalysis28760
type: catalysis
CONTROLLED: biochemicalReaction28758
CONTROLLER: phys-ent-participant28764
NAME: HOMOSERINE DEHYDROGENASE
XREF: unificationXref28761

biochemicalReaction28758
type: biochemicalReaction
EC-NUMBER: 1.1.1.3
LEFT: phys-ent-participant26766
LEFT: phys-ent-participant25608
NAME: Homoserine dehydrogenase
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant22943
XREF: unificationXref28759

phys-ent-participant25608
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25602
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25602
type: smallMolecule
MOLECULAR-WEIGHT: 119.12
NAME: homoserine
STRUCTURE: chemicalStructure25607
SYNONYMS: homo-ser
SYNONYMS: L-homoserine
XREF: unificationXref25606
XREF: unificationXref25605
XREF: unificationXref25604
XREF: unificationXref25603

chemicalStructure25607
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HOMO-SER-atom1" elementType="C" x2="0.97" y2="0.7"/> <atom id="HOMO-SER-atom2" elementType="O" x2="2.08" y2="1.14"/> <atom id="HOMO-SER-atom3" elementType="C" x2="0.0" y2="1.45"/> <atom id="HOMO-SER-atom4" elementType="O" x2="0.79" y2="-0.5"/> <atom id="HOMO-SER-atom5" elementType="N" x2="0.75" y2="2.42"/> <atom id="HOMO-SER-atom6" elementType="C" x2="-0.75" y2="0.47"/> <atom id="HOMO-SER-atom7" elementType="O" x2="-2.71" y2="-0.31"/> <atom id="HOMO-SER-atom8" elementType="C" x2="-1.96" y2="0.67"/> <atom id="HOMO-SER-atom9" elementType="H" x2="-0.97" y2="2.2"/> <bond id="HOMO-SER-bond1" atomRefs="HOMO-SER-atom2 HOMO-SER-atom1" order="2"/> <bond id="HOMO-SER-bond2" atomRefs="HOMO-SER-atom3 HOMO-SER-atom1" order="1"/> <bond id="HOMO-SER-bond3" atomRefs="HOMO-SER-atom4 HOMO-SER-atom1" order="1"/> <bond id="HOMO-SER-bond4" atomRefs="HOMO-SER-atom3 HOMO-SER-atom5" order="1"/> <bond id="HOMO-SER-bond5" atomRefs="HOMO-SER-atom6 HOMO-SER-atom3" order="1"/> <bond id="HOMO-SER-bond6" atomRefs="HOMO-SER-atom7 HOMO-SER-atom8" order="1"/> <bond id="HOMO-SER-bond7" atomRefs="HOMO-SER-atom8 HOMO-SER-atom6" order="1"/> <bond id="HOMO-SER-bond8" atomRefs="HOMO-SER-atom3 HOMO-SER-atom9" order="1"/> <formula concise="C 4 H 9 N 1 O 3" formalCharge="0"/> 119.12 C(O)(=O)[CH](N)CCO

unificationXref25606
type: unificationXref
DB: CapCyc
ID: HOMO-SER

unificationXref25605
type: unificationXref
DB: CAS
ID: 498-19-1

unificationXref25604
type: unificationXref
DB: LIGAND
ID: C00263

unificationXref25603
type: unificationXref
DB: CAS
ID: 672-15-1

phys-ent-participant22943
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22938
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22938
type: smallMolecule
MOLECULAR-WEIGHT: 117.104
NAME: L-aspartate-semialdehyde
STRUCTURE: chemicalStructure22942
SYNONYMS: L-aspartic 4-semialdehyde
SYNONYMS: L-aspartate-4-semialdehyde
SYNONYMS: L-aspartate β-semialdehyde
XREF: unificationXref22941
XREF: unificationXref22940
XREF: unificationXref22939

chemicalStructure22942
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-ASPARTATE-SEMIALDEHYDE-atom1" elementType="H" x2="0.0" y2="-2.1074"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom2" elementType="N" x2="3.5871" y2="0.0"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom3" elementType="O" x2="1.2154" y2="0.0"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom4" elementType="O" x2="4.8222" y2="-3.5677"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom5" elementType="O" x2="5.9786" y2="-1.3818"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom6" elementType="C" x2="2.3915" y2="-2.0876"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom7" elementType="C" x2="1.2154" y2="-1.4016"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom8" elementType="C" x2="4.8222" y2="-2.166"/> <atom id="L-ASPARTATE-SEMIALDEHYDE-atom9" elementType="C" x2="3.5871" y2="-1.4016"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond1" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom8 L-ASPARTATE-SEMIALDEHYDE-atom9" order="1"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond2" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom6 L-ASPARTATE-SEMIALDEHYDE-atom9" order="1"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond3" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom6 L-ASPARTATE-SEMIALDEHYDE-atom7" order="1"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond4" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom5 L-ASPARTATE-SEMIALDEHYDE-atom8" order="1"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond5" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom4 L-ASPARTATE-SEMIALDEHYDE-atom8" order="2"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond6" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom3 L-ASPARTATE-SEMIALDEHYDE-atom7" order="2"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond7" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom9 L-ASPARTATE-SEMIALDEHYDE-atom2" order="1"/> <bond id="L-ASPARTATE-SEMIALDEHYDE-bond8" atomRefs="L-ASPARTATE-SEMIALDEHYDE-atom1 L-ASPARTATE-SEMIALDEHYDE-atom7" order="1"/> <formula concise="C 4 H 7 N 1 O 3" formalCharge="0"/> 117.104 [CH](=O)CC(N)C(O)=O

unificationXref22941
type: unificationXref
DB: CapCyc
ID: L-ASPARTATE-SEMIALDEHYDE

unificationXref22940
type: unificationXref
DB: CAS
ID: 15106-57-7

unificationXref22939
type: unificationXref
DB: LIGAND
ID: C00441

unificationXref28759
type: unificationXref
DB: CapCyc
ID: HOMOSERDEHYDROG-RXN

phys-ent-participant28764
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28762
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28762
type: protein
NAME: HOMOSERINE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28763

unificationXref28763
type: unificationXref
DB: CapCyc
ID: SGNU198942-MONOMER

unificationXref28761
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-339

catalysis28753
type: catalysis
CONTROLLED: biochemicalReaction28746
CONTROLLER: phys-ent-participant28757
NAME: hydroxypyruvate reductase
XREF: unificationXref28754

biochemicalReaction28746
type: biochemicalReaction
EC-NUMBER: 1.1.1.81
LEFT: phys-ent-participant26027
LEFT: phys-ent-participant25635
NAME: Hydroxypyruvate reductase
RIGHT: phys-ent-participant26019
RIGHT: phys-ent-participant25744
SYNONYMS: D-glycerate dehydrogenase
XREF: unificationXref28747

unificationXref28747
type: unificationXref
DB: CapCyc
ID: HYDROXYPYRUVATE-REDUCTASE-RXN

unificationXref28754
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-129

catalysis28748
type: catalysis
CONTROLLED: biochemicalReaction28746
CONTROLLER: phys-ent-participant28752
NAME: hydroxypyruvate reductase
XREF: unificationXref28749

unificationXref28749
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-649

catalysis28728
type: catalysis
CONTROLLED: biochemicalReaction28726
CONTROLLER: phys-ent-participant28732
NAME: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE
XREF: unificationXref28729

biochemicalReaction28726
type: biochemicalReaction
EC-NUMBER: 1.1.1.205
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant27218
LEFT: phys-ent-participant21271
NAME: IMP dehydrogenase
RIGHT: phys-ent-participant21083
RIGHT: phys-ent-participant27230
SYNONYMS: Inosine monophosphate oxidoreductase
SYNONYMS: IMP oxidoreductase
SYNONYMS: Inosinate dehydrogenase
SYNONYMS: Inosinic acid dehydrogenase
SYNONYMS: Inosine-5'-monophosphate dehydrogenase
XREF: unificationXref28727

phys-ent-participant21271
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21266
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21266
type: smallMolecule
MOLECULAR-WEIGHT: 348.208
NAME: IMP
STRUCTURE: chemicalStructure21270
SYNONYMS: 5'-IMP
SYNONYMS: inosinate
SYNONYMS: inosine-5'-phosphate
SYNONYMS: ribosylhypoxanthine monophosphate
SYNONYMS: IMP
SYNONYMS: inosine monophosphate
SYNONYMS: inosine 5'-monophosphate
SYNONYMS: inosine 5'-phosphate
SYNONYMS: 5'-inosinate
SYNONYMS: 5'-inosinic acid
SYNONYMS: 5'-inosine monophosphate
XREF: unificationXref21269
XREF: unificationXref21268
XREF: unificationXref21267

chemicalStructure21270
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="IMP-atom1" elementType="H" x2="3.4" y2="-6.9"/> <atom id="IMP-atom2" elementType="O" x2="5.7949" y2="-8.2535"/> <atom id="IMP-atom3" elementType="O" x2="1.3645" y2="-0.8263"/> <atom id="IMP-atom4" elementType="O" x2="4.6931" y2="0.0"/> <atom id="IMP-atom5" elementType="O" x2="7.6738" y2="-0.0129"/> <atom id="IMP-atom6" elementType="O" x2="1.3682" y2="-3.5927"/> <atom id="IMP-atom7" elementType="O" x2="0.0" y2="-2.2263"/> <atom id="IMP-atom8" elementType="C" x2="4.6153" y2="-4.8224"/> <atom id="IMP-atom9" elementType="C" x2="9.1131" y2="-5.506"/> <atom id="IMP-atom10" elementType="C" x2="3.7565" y2="-2.8253"/> <atom id="IMP-atom11" elementType="N" x2="8.3122" y2="-6.6288"/> <atom id="IMP-atom12" elementType="N" x2="5.7988" y2="-4.1239"/> <atom id="IMP-atom13" elementType="O" x2="2.7382" y2="-2.2227"/> <atom id="IMP-atom14" elementType="O" x2="6.1558" y2="-3.2201"/> <atom id="IMP-atom15" elementType="C" x2="5.7988" y2="-6.8871"/> <atom id="IMP-atom16" elementType="C" x2="6.9972" y2="-6.2039"/> <atom id="IMP-atom17" elementType="C" x2="6.9972" y2="-4.8224"/> <atom id="IMP-atom18" elementType="C" x2="5.4774" y2="-1.1193"/> <atom id="IMP-atom19" elementType="C" x2="6.8644" y2="-1.1193"/> <atom id="IMP-atom20" elementType="C" x2="5.0436" y2="-2.4231"/> <atom id="IMP-atom21" elementType="C" x2="7.2781" y2="-2.3954"/> <atom id="IMP-atom22" elementType="N" x2="4.6153" y2="-6.2039"/> <atom id="IMP-atom23" elementType="N" x2="8.3085" y2="-4.4051"/> <atom id="IMP-atom24" elementType="P" x2="1.3664" y2="-2.2263"/> <bond id="IMP-bond1" atomRefs="IMP-atom21 IMP-atom23" order="1"/> <bond id="IMP-bond2" atomRefs="IMP-atom19 IMP-atom21" order="1"/> <bond id="IMP-bond3" atomRefs="IMP-atom18 IMP-atom20" order="1"/> <bond id="IMP-bond4" atomRefs="IMP-atom18 IMP-atom19" order="1"/> <bond id="IMP-bond5" atomRefs="IMP-atom17 IMP-atom23" order="A"/> <bond id="IMP-bond6" atomRefs="IMP-atom16 IMP-atom17" order="A"/> <bond id="IMP-bond7" atomRefs="IMP-atom22 IMP-atom15" order="A"/> <…

unificationXref21269
type: unificationXref
DB: CapCyc
ID: IMP

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type: unificationXref
DB: LIGAND
ID: C00130

unificationXref21267
type: unificationXref
DB: CAS
ID: 131-99-7

phys-ent-participant21083
type: physicalEntityParticipant
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CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21078
type: smallMolecule
MOLECULAR-WEIGHT: 364.208
NAME: XMP
STRUCTURE: chemicalStructure21082
SYNONYMS: (9-D-ribosylxanthine)-5'-phosphate
SYNONYMS: xanthosine-5-phosphate
SYNONYMS: xanthosine-5'-phosphate
SYNONYMS: xanthosine-5-P
SYNONYMS: xanthosine-5'-P
XREF: unificationXref21081
XREF: unificationXref21080
XREF: unificationXref21079

chemicalStructure21082
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="XANTHOSINE-5-PHOSPHATE-atom1" elementType="H" x2="2.9576" y2="-8.084"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom2" elementType="H" x2="5.4706" y2="-4.0103"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom3" elementType="H" x2="4.7546" y2="-1.6695"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom4" elementType="H" x2="6.9868" y2="-1.6695"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom5" elementType="H" x2="4.0649" y2="-1.3975"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom6" elementType="H" x2="7.7128" y2="-1.5788"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom7" elementType="O" x2="5.3354" y2="-9.5273"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom8" elementType="O" x2="3.1032" y2="-5.3899"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom9" elementType="O" x2="1.3975" y2="-4.5007"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom10" elementType="O" x2="4.7546" y2="0.0"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom11" elementType="O" x2="6.9868" y2="0.0"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom12" elementType="O" x2="1.3975" y2="-1.7239"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom13" elementType="O" x2="0.0" y2="-3.0851"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom14" elementType="C" x2="8.6563" y2="-6.8055"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom15" elementType="C" x2="4.0649" y2="-3.0851"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom16" elementType="N" x2="7.6946" y2="-8.0392"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom17" elementType="O" x2="2.6856" y2="-3.0851"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom18" elementType="O" x2="5.8977" y2="-3.2121"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom19" elementType="C" x2="5.3354" y2="-8.148"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom20" elementType="C" x2="4.21" y2="-6.2065"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom21" elementType="C" x2="6.4785" y2="-7.5309"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom22" elementType="C" x2="6.4785" y2="-6.1883"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom23" elementType="N" x2="4.21" y2="-7.4584"/> <atom id="XANTHOSINE-5-PHOSPHATE-atom24" elementType="N" x2="5.3899" y2="-5.408"/> <atom id="X…

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type: unificationXref
DB: CapCyc
ID: XANTHOSINE-5-PHOSPHATE

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type: unificationXref
DB: LIGAND
ID: C00655

unificationXref21079
type: unificationXref
DB: CAS
ID: 523-98-8

unificationXref28727
type: unificationXref
DB: CapCyc
ID: IMP-DEHYDROG-RXN

phys-ent-participant28732
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28730
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28730
type: protein
NAME: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28731

unificationXref28731
type: unificationXref
DB: CapCyc
ID: SGNU204410-MONOMER

unificationXref28729
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-682

catalysis28721
type: catalysis
CONTROLLED: biochemicalReaction28709
CONTROLLER: phys-ent-participant28725
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref28722

biochemicalReaction28709
type: biochemicalReaction
DELTA-G: -5.
EC-NUMBER: 1.1.1.42
LEFT: phys-ent-participant22996
LEFT: phys-ent-participant26766
NAME: Isocitrate dehydrogenase (NADP+)
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant25706
RIGHT: phys-ent-participant21166
SYNONYMS: IDH
SYNONYMS: Oxalosuccinate decarboxylase
SYNONYMS: isocitrate oxidation
SYNONYMS: threo-D(s)-isocitrate oxidoreductase (decarboxylating)
SYNONYMS: isocitrate dehydrogenase
XREF: unificationXref28710

unificationXref28710
type: unificationXref
DB: CapCyc
ID: ISOCITDEH-RXN

unificationXref28722
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-45

catalysis28716
type: catalysis
CONTROLLED: biochemicalReaction28709
CONTROLLER: phys-ent-participant28720
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref28717

unificationXref28717
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-279

catalysis28711
type: catalysis
CONTROLLED: biochemicalReaction28709
CONTROLLER: phys-ent-participant28715
NAME: ISOCITRATE DEHYDROGENASE
XREF: unificationXref28712

unificationXref28712
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-701

catalysis28692
type: catalysis
CONTROLLED: biochemicalReaction28685
CONTROLLER: phys-ent-participant28696
NAME: MALATE OXIDOREDUCTASE
XREF: unificationXref28693

biochemicalReaction28685
type: biochemicalReaction
DELTA-G: 7.1
EC-NUMBER: 1.1.1.37
LEFT: phys-ent-participant21533
LEFT: phys-ent-participant27218
NAME: Malate dehydrogenase
RIGHT: phys-ent-participant21016
RIGHT: phys-ent-participant27230
SYNONYMS: Malic dehydrogenase
SYNONYMS: malate dehydrogenation
XREF: unificationXref28686

phys-ent-participant21533
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21526
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21526
type: smallMolecule
MOLECULAR-WEIGHT: 134.088
NAME: malate
STRUCTURE: chemicalStructure21532
SYNONYMS: hydroxysuccinic acid
SYNONYMS: hydroxybutanedioic acid
SYNONYMS: malic acid
SYNONYMS: L-mal
SYNONYMS: mal
SYNONYMS: L-malate
SYNONYMS: (S)-malate
SYNONYMS: DL-malic acid
XREF: unificationXref21531
XREF: unificationXref21530
XREF: unificationXref21529
XREF: unificationXref21528
XREF: unificationXref21527

chemicalStructure21532
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MAL-atom1" elementType="C" x2="-0.58632" y2="-0.47557"/> <atom id="MAL-atom2" elementType="O" x2="0.58306" y2="0.17264"/> <atom id="MAL-atom3" elementType="O" x2="-1.0" y2="-0.25733"/> <atom id="MAL-atom4" elementType="C" x2="0.58306" y2="-0.29642"/> <atom id="MAL-atom5" elementType="O" x2="-0.58632" y2="-0.94463"/> <atom id="MAL-atom6" elementType="O" x2="0.1759" y2="-1.0"/> <atom id="MAL-atom7" elementType="O" x2="0.99674" y2="-0.5114"/> <atom id="MAL-atom8" elementType="C" x2="-0.17915" y2="-0.23779"/> <atom id="MAL-atom9" elementType="C" x2="0.1759" y2="-0.53094"/> <bond id="MAL-bond1" atomRefs="MAL-atom9 MAL-atom8" order="1"/> <bond id="MAL-bond2" atomRefs="MAL-atom7 MAL-atom4" order="1"/> <bond id="MAL-bond3" atomRefs="MAL-atom6 MAL-atom9" order="1"/> <bond id="MAL-bond4" atomRefs="MAL-atom5 MAL-atom1" order="2"/> <bond id="MAL-bond5" atomRefs="MAL-atom4 MAL-atom9" order="1"/> <bond id="MAL-bond6" atomRefs="MAL-atom3 MAL-atom1" order="1"/> <bond id="MAL-bond7" atomRefs="MAL-atom2 MAL-atom4" order="2"/> <bond id="MAL-bond8" atomRefs="MAL-atom1 MAL-atom8" order="1"/> <formula concise="C 4 H 6 O 5" formalCharge="0"/> 134.088 C(O)(=O)CC(O)C(O)=O

unificationXref21531
type: unificationXref
DB: CapCyc
ID: MAL

unificationXref21530
type: unificationXref
DB: CAS
ID: 6915-15-7

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type: unificationXref
DB: LIGAND
ID: C00497

unificationXref21528
type: unificationXref
DB: LIGAND
ID: C00149

unificationXref21527
type: unificationXref
DB: CAS
ID: 97-67-6

phys-ent-participant21016
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21011
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21011
type: smallMolecule
MOLECULAR-WEIGHT: 132.073
NAME: oxaloacetate
STRUCTURE: chemicalStructure21015
SYNONYMS: keto-oxaloacetate
SYNONYMS: oxaloacetic acid
SYNONYMS: oxalacetic acid
SYNONYMS: oxaloacetate
SYNONYMS: oxalacetate
XREF: unificationXref21014
XREF: unificationXref21013
XREF: unificationXref21012

chemicalStructure21015
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OXALACETIC_ACID-atom1" elementType="O" x2="-0.32209" y2="0.99663"/> <atom id="OXALACETIC_ACID-atom2" elementType="O" x2="-0.54806" y2="-1.0"/> <atom id="OXALACETIC_ACID-atom3" elementType="C" x2="-0.57841" y2="-0.21079"/> <atom id="OXALACETIC_ACID-atom4" elementType="O" x2="0.10624" y2="0.20067"/> <atom id="OXALACETIC_ACID-atom5" elementType="C" x2="-0.35245" y2="-0.59191"/> <atom id="OXALACETIC_ACID-atom6" elementType="C" x2="-0.3457" y2="0.20067"/> <atom id="OXALACETIC_ACID-atom7" elementType="O" x2="0.09949" y2="-0.59191"/> <atom id="OXALACETIC_ACID-atom8" elementType="C" x2="-0.54806" y2="0.6054"/> <atom id="OXALACETIC_ACID-atom9" elementType="O" x2="-1.0" y2="0.6054"/> <bond id="OXALACETIC_ACID-bond1" atomRefs="OXALACETIC_ACID-atom9 OXALACETIC_ACID-atom8" order="2"/> <bond id="OXALACETIC_ACID-bond2" atomRefs="OXALACETIC_ACID-atom8 OXALACETIC_ACID-atom6" order="1"/> <bond id="OXALACETIC_ACID-bond3" atomRefs="OXALACETIC_ACID-atom7 OXALACETIC_ACID-atom5" order="2"/> <bond id="OXALACETIC_ACID-bond4" atomRefs="OXALACETIC_ACID-atom6 OXALACETIC_ACID-atom3" order="1"/> <bond id="OXALACETIC_ACID-bond5" atomRefs="OXALACETIC_ACID-atom5 OXALACETIC_ACID-atom3" order="1"/> <bond id="OXALACETIC_ACID-bond6" atomRefs="OXALACETIC_ACID-atom4 OXALACETIC_ACID-atom6" order="2"/> <bond id="OXALACETIC_ACID-bond7" atomRefs="OXALACETIC_ACID-atom2 OXALACETIC_ACID-atom5" order="1"/> <bond id="OXALACETIC_ACID-bond8" atomRefs="OXALACETIC_ACID-atom1 OXALACETIC_ACID-atom8" order="1"/> <formula concise="C 4 H 4 O 5" formalCharge="0"/> 132.073 C(O)(=O)CC(=O)C(=O)O

unificationXref21014
type: unificationXref
DB: CapCyc
ID: OXALACETIC_ACID

unificationXref21013
type: unificationXref
DB: CAS
ID: 328-42-7

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type: unificationXref
DB: LIGAND
ID: C00036

unificationXref28686
type: unificationXref
DB: CapCyc
ID: MALATE-DEH-RXN

phys-ent-participant28696
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28694
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28694
type: protein
NAME: MALATE OXIDOREDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref28695

unificationXref28695
type: unificationXref
DB: CapCyc
ID: SGNU197137-MONOMER

unificationXref28693
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-144

catalysis28687
type: catalysis
CONTROLLED: biochemicalReaction28685
CONTROLLER: phys-ent-participant28691
NAME: MALATE OXIDOREDUCTASE
XREF: unificationXref28688

phys-ent-participant28691
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28689
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28689
type: protein
NAME: MALATE OXIDOREDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref28690

unificationXref28690
type: unificationXref
DB: CapCyc
ID: SGNU197771-MONOMER

unificationXref28688
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-222

catalysis28674
type: catalysis
CONTROLLED: biochemicalReaction28667
CONTROLLER: phys-ent-participant28678
NAME: PHOSPHOGLYCERATE DEHYDROGENASE
XREF: unificationXref28675

biochemicalReaction28667
type: biochemicalReaction
EC-NUMBER: 1.1.1.95
LEFT: phys-ent-participant21917
LEFT: phys-ent-participant27218
NAME: Phosphoglycerate dehydrogenase
RIGHT: phys-ent-participant25762
RIGHT: phys-ent-participant27230
SYNONYMS: PGDH
SYNONYMS: D-3-phosphoglycerate dehydrogenase
XREF: unificationXref28668

phys-ent-participant21917
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21912
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21912
type: smallMolecule
MOLECULAR-WEIGHT: 186.058
NAME: 3-phosphoglycerate
STRUCTURE: chemicalStructure21916
SYNONYMS: 3-phospho-(R)-glycerate
SYNONYMS: 3-phospho-glyceric acid
SYNONYMS: g3p
SYNONYMS: 3-pg
SYNONYMS: 3-P-glycerate
SYNONYMS: glycerate 3-phosphate
SYNONYMS: 3-phospho-D-glycerate
SYNONYMS: 3-P-D-glycerate
SYNONYMS: glycerate-3-P
SYNONYMS: D-Glycerate 3-phosphate
SYNONYMS: phosphoglycerate
XREF: unificationXref21915
XREF: unificationXref21914
XREF: unificationXref21913

chemicalStructure21916
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="G3P-atom1" elementType="O" x2="1.2124" y2="-3.5"/> <atom id="G3P-atom2" elementType="O" x2="6.2497" y2="-2.8"/> <atom id="G3P-atom3" elementType="O" x2="0.0" y2="-1.4"/> <atom id="G3P-atom4" elementType="O" x2="2.4249" y2="0.0"/> <atom id="G3P-atom5" elementType="O" x2="6.2497" y2="0.0"/> <atom id="G3P-atom6" elementType="O" x2="7.6497" y2="-1.4"/> <atom id="G3P-atom7" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="G3P-atom8" elementType="O" x2="4.8497" y2="-1.4"/> <atom id="G3P-atom9" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="G3P-atom10" elementType="C" x2="2.4248" y2="-1.4"/> <atom id="G3P-atom11" elementType="P" x2="6.2497" y2="-1.4"/> <bond id="G3P-bond1" atomRefs="G3P-atom9 G3P-atom10" order="1"/> <bond id="G3P-bond2" atomRefs="G3P-atom8 G3P-atom11" order="1"/> <bond id="G3P-bond3" atomRefs="G3P-atom7 G3P-atom10" order="1"/> <bond id="G3P-bond4" atomRefs="G3P-atom7 G3P-atom8" order="1"/> <bond id="G3P-bond5" atomRefs="G3P-atom6 G3P-atom11" order="1"/> <bond id="G3P-bond6" atomRefs="G3P-atom5 G3P-atom11" order="1"/> <bond id="G3P-bond7" atomRefs="G3P-atom10 G3P-atom4" order="1"/> <bond id="G3P-bond8" atomRefs="G3P-atom3 G3P-atom9" order="1"/> <bond id="G3P-bond9" atomRefs="G3P-atom2 G3P-atom11" order="2"/> <bond id="G3P-bond10" atomRefs="G3P-atom1 G3P-atom9" order="2"/> <formula concise="C 3 H 7 O 7 P 1" formalCharge="0"/> 186.058 C(C(O)C(O)=O)OP(O)(O)=O

unificationXref21915
type: unificationXref
DB: CapCyc
ID: G3P

unificationXref21914
type: unificationXref
DB: CAS
ID: 820-11-1

unificationXref21913
type: unificationXref
DB: LIGAND
ID: C00197

phys-ent-participant25762
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25757
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25757
type: smallMolecule
MOLECULAR-WEIGHT: 184.042
NAME: 3-phospho-hydroxypyruvate
STRUCTURE: chemicalStructure25761
SYNONYMS: 3-phosphonooxypyruvate
SYNONYMS: 3-P-hydroxypyruvate
SYNONYMS: 3-p-OH-pyr
SYNONYMS: 3-phosphohydroxypyruvate
SYNONYMS: 3-p-OH-pyruvate
SYNONYMS: 3-p-hydroxy-pyr
SYNONYMS: 3-phosphohydroxy-pyr
SYNONYMS: phosphohydroxypyruate
XREF: unificationXref25760
XREF: unificationXref25759
XREF: unificationXref25758

chemicalStructure25761
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-P-HYDROXYPYRUVATE-atom1" elementType="O" x2="0.7" y2="-0.08"/> <atom id="3-P-HYDROXYPYRUVATE-atom2" elementType="O" x2="-0.65333" y2="-1.0"/> <atom id="3-P-HYDROXYPYRUVATE-atom3" elementType="P" x2="-0.65333" y2="-0.65333"/> <atom id="3-P-HYDROXYPYRUVATE-atom4" elementType="O" x2="-0.65333" y2="-0.30667"/> <atom id="3-P-HYDROXYPYRUVATE-atom5" elementType="C" x2="-0.01333" y2="-0.43333"/> <atom id="3-P-HYDROXYPYRUVATE-atom6" elementType="C" x2="0.33667" y2="-0.64667"/> <atom id="3-P-HYDROXYPYRUVATE-atom7" elementType="O" x2="-1.0" y2="-0.65333"/> <atom id="3-P-HYDROXYPYRUVATE-atom8" elementType="O" x2="0.33667" y2="-0.3"/> <atom id="3-P-HYDROXYPYRUVATE-atom9" elementType="C" x2="0.7" y2="-0.42667"/> <atom id="3-P-HYDROXYPYRUVATE-atom10" elementType="O" x2="0.99667" y2="-0.60333"/> <atom id="3-P-HYDROXYPYRUVATE-atom11" elementType="O" x2="-0.3" y2="-0.65333"/> <bond id="3-P-HYDROXYPYRUVATE-bond1" atomRefs="3-P-HYDROXYPYRUVATE-atom11 3-P-HYDROXYPYRUVATE-atom3" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond2" atomRefs="3-P-HYDROXYPYRUVATE-atom10 3-P-HYDROXYPYRUVATE-atom9" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond3" atomRefs="3-P-HYDROXYPYRUVATE-atom9 3-P-HYDROXYPYRUVATE-atom6" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond4" atomRefs="3-P-HYDROXYPYRUVATE-atom8 3-P-HYDROXYPYRUVATE-atom6" order="2"/> <bond id="3-P-HYDROXYPYRUVATE-bond5" atomRefs="3-P-HYDROXYPYRUVATE-atom7 3-P-HYDROXYPYRUVATE-atom3" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond6" atomRefs="3-P-HYDROXYPYRUVATE-atom6 3-P-HYDROXYPYRUVATE-atom5" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond7" atomRefs="3-P-HYDROXYPYRUVATE-atom5 3-P-HYDROXYPYRUVATE-atom11" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond8" atomRefs="3-P-HYDROXYPYRUVATE-atom4 3-P-HYDROXYPYRUVATE-atom3" order="2"/> <bond id="3-P-HYDROXYPYRUVATE-bond9" atomRefs="3-P-HYDROXYPYRUVATE-atom2 3-P-HYDROXYPYRUVATE-atom3" order="1"/> <bond id="3-P-HYDROXYPYRUVATE-bond10" atomRefs="3-P-HYDROXYPYRUVATE-atom1 3-P-HYDROXYPYRUVATE-atom9" order…

unificationXref25760
type: unificationXref
DB: CapCyc
ID: 3-P-HYDROXYPYRUVATE

unificationXref25759
type: unificationXref
DB: CAS
ID: 3913-50-6

unificationXref25758
type: unificationXref
DB: LIGAND
ID: C03232

unificationXref28668
type: unificationXref
DB: CapCyc
ID: PGLYCDEHYDROG-RXN

phys-ent-participant28678
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28676
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28676
type: protein
NAME: PHOSPHOGLYCERATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28677

unificationXref28677
type: unificationXref
DB: CapCyc
ID: SGNU197263-MONOMER

unificationXref28675
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-166

catalysis28669
type: catalysis
CONTROLLED: biochemicalReaction28667
CONTROLLER: phys-ent-participant28673
NAME: D-3-PHOSPHOGLYCERATE DEHYDROGENASE
XREF: unificationXref28670

phys-ent-participant28673
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28671
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28671
type: protein
NAME: D-3-PHOSPHOGLYCERATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28672

unificationXref28672
type: unificationXref
DB: CapCyc
ID: SGNU204677-MONOMER

unificationXref28670
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-697

catalysis28619
type: catalysis
CONTROLLED: biochemicalReaction28612
CONTROLLER: phys-ent-participant28623
NAME: DIHYDROFLAVONOL-4-REDUCTASE
XREF: unificationXref28620

biochemicalReaction28612
type: biochemicalReaction
EC-NUMBER: 1.1.1.219
LEFT: phys-ent-participant28133
LEFT: phys-ent-participant26753
NAME: RXN-600
RIGHT: phys-ent-participant28361
RIGHT: phys-ent-participant26766
XREF: unificationXref28613

phys-ent-participant28133
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28130
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28130
type: smallMolecule
MOLECULAR-WEIGHT: 304.256
NAME: dihydroquercetin
STRUCTURE: chemicalStructure28132
SYNONYMS: dihydro quercetin
SYNONYMS: taxifolin
XREF: unificationXref28131

chemicalStructure28132
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-474-atom1" elementType="O" x2="4.8552" y2="0.0"/> <atom id="CPD-474-atom2" elementType="O" x2="0.0" y2="-4.2206"/> <atom id="CPD-474-atom3" elementType="O" x2="10.9417" y2="-6.3222"/> <atom id="CPD-474-atom4" elementType="O" x2="8.496" y2="-7.6264"/> <atom id="CPD-474-atom5" elementType="O" x2="2.4095" y2="-0.0181"/> <atom id="CPD-474-atom6" elementType="O" x2="7.3003" y2="-1.4127"/> <atom id="CPD-474-atom7" elementType="C" x2="9.7279" y2="-4.2206"/> <atom id="CPD-474-atom8" elementType="C" x2="8.5141" y2="-3.5323"/> <atom id="CPD-474-atom9" elementType="C" x2="1.2138" y2="-2.1191"/> <atom id="CPD-474-atom10" elementType="C" x2="2.4095" y2="-4.2387"/> <atom id="CPD-474-atom11" elementType="C" x2="7.3184" y2="-5.6339"/> <atom id="CPD-474-atom12" elementType="O" x2="4.8733" y2="-4.2387"/> <atom id="CPD-474-atom13" elementType="C" x2="4.8552" y2="-1.3946"/> <atom id="CPD-474-atom14" elementType="C" x2="1.2138" y2="-3.5323"/> <atom id="CPD-474-atom15" elementType="C" x2="9.7279" y2="-5.6158"/> <atom id="CPD-474-atom16" elementType="C" x2="8.5141" y2="-6.3402"/> <atom id="CPD-474-atom17" elementType="C" x2="2.4095" y2="-1.4127"/> <atom id="CPD-474-atom18" elementType="C" x2="7.3184" y2="-4.2387"/> <atom id="CPD-474-atom19" elementType="C" x2="3.6414" y2="-3.5323"/> <atom id="CPD-474-atom20" elementType="C" x2="3.6414" y2="-2.1191"/> <atom id="CPD-474-atom21" elementType="C" x2="6.0865" y2="-2.101"/> <atom id="CPD-474-atom22" elementType="C" x2="6.1046" y2="-3.5323"/> <bond id="CPD-474-bond1" atomRefs="CPD-474-atom21 CPD-474-atom22" order="1"/> <bond id="CPD-474-bond2" atomRefs="CPD-474-atom20 CPD-474-atom19" order="A"/> <bond id="CPD-474-bond3" atomRefs="CPD-474-atom22 CPD-474-atom18" order="1"/> <bond id="CPD-474-bond4" atomRefs="CPD-474-atom17 CPD-474-atom20" order="A"/> <bond id="CPD-474-bond5" atomRefs="CPD-474-atom16 CPD-474-atom15" order="A"/> <bond id="CPD-474-bond6" atomRefs="CPD-474-atom13 CPD-474-atom21" order="1"/> <bond id="CPD-474-bond7" atomRe…

unificationXref28131
type: unificationXref
DB: CapCyc
ID: CPD-474

phys-ent-participant28361
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28358
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28358
type: smallMolecule
MOLECULAR-WEIGHT: 306.271
NAME: leucocyanidin
STRUCTURE: chemicalStructure28360
XREF: unificationXref28359

chemicalStructure28360
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-590-atom1" elementType="C" x2="-0.56033057" y2="0.13388431"/> <atom id="CPD-590-atom2" elementType="O" x2="0.55041325" y2="-1.0"/> <atom id="CPD-590-atom3" elementType="O" x2="-1.0" y2="-0.37851238"/> <atom id="CPD-590-atom4" elementType="C" x2="-0.7785124" y2="0.0049586296"/> <atom id="CPD-590-atom5" elementType="O" x2="-0.11074382" y2="-0.38181818"/> <atom id="CPD-590-atom6" elementType="C" x2="-0.3355372" y2="-0.25289255"/> <atom id="CPD-590-atom7" elementType="C" x2="-0.11404961" y2="0.1371901"/> <atom id="CPD-590-atom8" elementType="C" x2="0.3355372" y2="-0.38181818"/> <atom id="CPD-590-atom9" elementType="C" x2="0.114049554" y2="-0.25289255"/> <atom id="CPD-590-atom10" elementType="C" x2="0.77520657" y2="-0.63305783"/> <atom id="CPD-590-atom11" elementType="C" x2="0.11074376" y2="0.008264422"/> <atom id="CPD-590-atom12" elementType="C" x2="0.55371904" y2="-0.76528925"/> <atom id="CPD-590-atom13" elementType="C" x2="0.3355372" y2="-0.6363636"/> <atom id="CPD-590-atom14" elementType="O" x2="-0.56033057" y2="0.38842976"/> <atom id="CPD-590-atom15" elementType="O" x2="-0.11404961" y2="0.39173555"/> <atom id="CPD-590-atom16" elementType="C" x2="0.55371904" y2="-0.25289255"/> <atom id="CPD-590-atom17" elementType="C" x2="0.77520657" y2="-0.37851238"/> <atom id="CPD-590-atom18" elementType="C" x2="-0.7785124" y2="-0.25289255"/> <atom id="CPD-590-atom19" elementType="C" x2="-0.56033057" y2="-0.38181818"/> <atom id="CPD-590-atom20" elementType="O" x2="0.3322314" y2="0.13388431"/> <atom id="CPD-590-atom21" elementType="O" x2="0.9966942" y2="-0.76198345"/> <atom id="CPD-590-atom22" elementType="C" x2="-0.3355372" y2="0.0049586296"/> <bond id="CPD-590-bond1" atomRefs="CPD-590-atom22 CPD-590-atom6" order="A"/> <bond id="CPD-590-bond2" atomRefs="CPD-590-atom19 CPD-590-atom18" order="A"/> <bond id="CPD-590-bond3" atomRefs="CPD-590-atom18 CPD-590-atom4" order="A"/> <bond id="CPD-590-bond4" atomRefs="CPD-590-atom18 CPD-590-atom3" order="1"/> <bond id="CPD-590-bon…

unificationXref28359
type: unificationXref
DB: CapCyc
ID: CPD-590

unificationXref28613
type: unificationXref
DB: CapCyc
ID: RXN-600

unificationXref28620
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-168

catalysis28614
type: catalysis
CONTROLLED: biochemicalReaction28612
CONTROLLER: phys-ent-participant28618
NAME: DIHYDROFLAVONOL 4-REDUCTASE
XREF: unificationXref28615

unificationXref28615
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-588

catalysis28585
type: catalysis
CONTROLLED: biochemicalReaction28581
CONTROLLER: phys-ent-participant28589
NAME: UDP GLUCOSE 6-DEHYDROGENASE
XREF: unificationXref28586

biochemicalReaction28581
type: biochemicalReaction
EC-NUMBER: 1.1.1.22
LEFT: phys-ent-participant22187
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant28583
NAME: UDP-glucose 6-dehydrogenase
RIGHT: phys-ent-participant23306
RIGHT: phys-ent-participant28584
XREF: unificationXref28582

phys-ent-participant22187
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22182
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22182
type: smallMolecule
COMMENT: UDP-glucose participates in a variety of enzymatic reactions, including: 1. Metabolism of polysaccharaides (glycogen, starch, laminarin and cellulose), disaccharides (sucrose, trehalose), β-glucosides, UDP-glucuronate and glucpsyl-ceramide. 2. Galactose entry into glycolysis 3. Synthesis of periplasmic membrane-derived oligosaccharides 4. Glucosylation of hydroxymethylcytosine residues in cells infected by T-even phages 5. Synthesis of the core region of lipopolysaccharides in Gram-negative bacteria 6. Glucosylation of wall teichoic acids in Gram-positive bacteria (|CITS: [8126437]| and references therein). In addition, it has been suggested that UDP-D-glucose can act as an extracellular signaling molecule |CITS: [12695547]|.
MOLECULAR-WEIGHT: 566.305
NAME: UDP-D-glucose
STRUCTURE: chemicalStructure22186
SYNONYMS: UDPG
SYNONYMS: UDP-glucose
XREF: unificationXref22185
XREF: unificationXref22184
XREF: unificationXref22183

chemicalStructure22186
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UDP-GLUCOSE-atom1" elementType="C" x2="-3.5313" y2="-1.6063"/> <atom id="UDP-GLUCOSE-atom2" elementType="C" x2="-4.2457" y2="-1.1938"/> <atom id="UDP-GLUCOSE-atom3" elementType="C" x2="-4.2457" y2="-0.3687"/> <atom id="UDP-GLUCOSE-atom4" elementType="C" x2="-3.5313" y2="0.0438"/> <atom id="UDP-GLUCOSE-atom5" elementType="C" x2="-2.8168" y2="-0.3687"/> <atom id="UDP-GLUCOSE-atom6" elementType="O" x2="-2.8168" y2="-1.1938"/> <atom id="UDP-GLUCOSE-atom7" elementType="O" x2="-0.9719" y2="0.3327"/> <atom id="UDP-GLUCOSE-atom8" elementType="P" x2="-1.3927" y2="-0.377"/> <atom id="UDP-GLUCOSE-atom9" elementType="O" x2="-2.1023" y2="0.0438"/> <atom id="UDP-GLUCOSE-atom10" elementType="O" x2="-1.8134" y2="-1.0866"/> <atom id="UDP-GLUCOSE-atom11" elementType="O" x2="-0.0752" y2="0.1982"/> <atom id="UDP-GLUCOSE-atom12" elementType="P" x2="0.1188" y2="-0.6037"/> <atom id="UDP-GLUCOSE-atom13" elementType="O" x2="-0.683" y2="-0.7977"/> <atom id="UDP-GLUCOSE-atom14" elementType="O" x2="0.3129" y2="-1.4055"/> <atom id="UDP-GLUCOSE-atom15" elementType="C" x2="-3.5313" y2="-2.4313"/> <atom id="UDP-GLUCOSE-atom16" elementType="O" x2="-2.8168" y2="-2.8438"/> <atom id="UDP-GLUCOSE-atom17" elementType="O" x2="-3.5313" y2="0.8688"/> <atom id="UDP-GLUCOSE-atom18" elementType="O" x2="-4.9602" y2="0.0438"/> <atom id="UDP-GLUCOSE-atom19" elementType="O" x2="-4.9602" y2="-1.6063"/> <atom id="UDP-GLUCOSE-atom20" elementType="O" x2="0.9207" y2="-0.4096"/> <atom id="UDP-GLUCOSE-atom21" elementType="C" x2="2.3093" y2="-0.9126"/> <atom id="UDP-GLUCOSE-atom22" elementType="C" x2="2.7146" y2="-0.1941"/> <atom id="UDP-GLUCOSE-atom23" elementType="C" x2="3.5233" y2="-0.3576"/> <atom id="UDP-GLUCOSE-atom24" elementType="C" x2="3.6176" y2="-1.1771"/> <atom id="UDP-GLUCOSE-atom25" elementType="C" x2="1.4897" y2="-1.007"/> <atom id="UDP-GLUCOSE-atom26" elementType="O" x2="2.8674" y2="-1.5202"/> <atom id="UDP-GLUCOSE-atom27" elementType="O" x2="4.1308" y2="0.2005"/> <atom id="UDP-GLUCOSE-atom28" e…

unificationXref22185
type: unificationXref
DB: CapCyc
ID: UDP-GLUCOSE

unificationXref22184
type: unificationXref
DB: CAS
ID: 133-89-1

unificationXref22183
type: unificationXref
DB: LIGAND
ID: C00029

phys-ent-participant28583
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27213
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant23306
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23301
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23301
type: smallMolecule
MOLECULAR-WEIGHT: 580.289
NAME: UDP-D-glucuronate
STRUCTURE: chemicalStructure23305
SYNONYMS: udp-glcua
SYNONYMS: UDP-glucuronate
SYNONYMS: uridine diphosphate glucuronate
SYNONYMS: uridine diphosphate glucuronic acid
XREF: unificationXref23304
XREF: unificationXref23303
XREF: unificationXref23302

chemicalStructure23305
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UDP-GLUCURONATE-atom1" elementType="C" x2="-3.5313" y2="-1.6063"/> <atom id="UDP-GLUCURONATE-atom2" elementType="C" x2="-4.2457" y2="-1.1938"/> <atom id="UDP-GLUCURONATE-atom3" elementType="C" x2="-4.2457" y2="-0.3687"/> <atom id="UDP-GLUCURONATE-atom4" elementType="C" x2="-3.5313" y2="0.0438"/> <atom id="UDP-GLUCURONATE-atom5" elementType="C" x2="-2.8168" y2="-0.3687"/> <atom id="UDP-GLUCURONATE-atom6" elementType="O" x2="-2.8168" y2="-1.1938"/> <atom id="UDP-GLUCURONATE-atom7" elementType="O" x2="-0.9719" y2="0.3327"/> <atom id="UDP-GLUCURONATE-atom8" elementType="P" x2="-1.3927" y2="-0.377"/> <atom id="UDP-GLUCURONATE-atom9" elementType="O" x2="-2.1023" y2="0.0438"/> <atom id="UDP-GLUCURONATE-atom10" elementType="O" x2="-1.8134" y2="-1.0866"/> <atom id="UDP-GLUCURONATE-atom11" elementType="O" x2="-0.0752" y2="0.1982"/> <atom id="UDP-GLUCURONATE-atom12" elementType="P" x2="0.1188" y2="-0.6037"/> <atom id="UDP-GLUCURONATE-atom13" elementType="O" x2="-0.683" y2="-0.7977"/> <atom id="UDP-GLUCURONATE-atom14" elementType="O" x2="0.3129" y2="-1.4055"/> <atom id="UDP-GLUCURONATE-atom15" elementType="C" x2="-3.5313" y2="-2.4313"/> <atom id="UDP-GLUCURONATE-atom16" elementType="O" x2="-2.8168" y2="-2.8438"/> <atom id="UDP-GLUCURONATE-atom17" elementType="O" x2="-3.5313" y2="0.8688"/> <atom id="UDP-GLUCURONATE-atom18" elementType="O" x2="-4.9602" y2="0.0438"/> <atom id="UDP-GLUCURONATE-atom19" elementType="O" x2="-4.9602" y2="-1.6063"/> <atom id="UDP-GLUCURONATE-atom20" elementType="O" x2="0.9207" y2="-0.4096"/> <atom id="UDP-GLUCURONATE-atom21" elementType="C" x2="2.3093" y2="-0.9126"/> <atom id="UDP-GLUCURONATE-atom22" elementType="C" x2="2.7146" y2="-0.1941"/> <atom id="UDP-GLUCURONATE-atom23" elementType="C" x2="3.5233" y2="-0.3576"/> <atom id="UDP-GLUCURONATE-atom24" elementType="C" x2="3.6176" y2="-1.1771"/> <atom id="UDP-GLUCURONATE-atom25" elementType="C" x2="1.4897" y2="-1.007"/> <atom id="UDP-GLUCURONATE-atom26" elementType="O" x2="2.8674" y2="-1.5202"/>…

unificationXref23304
type: unificationXref
DB: CapCyc
ID: UDP-GLUCURONATE

unificationXref23303
type: unificationXref
DB: CAS
ID: 2616-64-0

unificationXref23302
type: unificationXref
DB: LIGAND
ID: C00167

phys-ent-participant28584
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27225
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref28582
type: unificationXref
DB: CapCyc
ID: UGD-RXN

phys-ent-participant28589
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28587
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28587
type: protein
NAME: UDP GLUCOSE 6-DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28588

unificationXref28588
type: unificationXref
DB: CapCyc
ID: SGNU198157-MONOMER

unificationXref28586
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-269

catalysis28579
type: catalysis
CONTROLLED: biochemicalReaction28569
CONTROLLER: phys-ent-participant28568
NAME: glycolate oxidase
XREF: unificationXref28580

biochemicalReaction28569
type: biochemicalReaction
EC-NUMBER: 1.1.3.15
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant28574
NAME: (S)-2-hydroxy-acid oxidase
RIGHT: phys-ent-participant27200
RIGHT: phys-ent-participant28578
SYNONYMS: Hydroxy-acid oxidase B
SYNONYMS: Hydroxy-acid oxidase A
SYNONYMS: Glycolate oxidase
XREF: unificationXref28570

phys-ent-participant28574
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28571
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28571
type: smallMolecule
NAME: an (S)-2-hydroxyacid
STRUCTURE: chemicalStructure28573
XREF: unificationXref28572

chemicalStructure28573
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="S-2-Hydroxyacids1" title="an (S)-2-hydroxyacid"> <atomArray> <atom id="S-2-Hydroxyacids1-atom1" elementType="H" x2="0.9772" y2="-3.4186"/> <atom id="S-2-Hydroxyacids1-atom2" elementType="O" x2="2.6667" y2="-0.0627"/> <atom id="S-2-Hydroxyacids1-atom3" elementType="O" x2="0.7099" y2="0.0"/> <atom id="S-2-Hydroxyacids1-atom4" elementType="O" x2="2.9388" y2="-2.0854"/> <atom id="S-2-Hydroxyacids1-atom5" elementType="R1" x2="0.0" y2="-1.3007"/> <atom id="S-2-Hydroxyacids1-atom6" elementType="C" x2="1.5815" y2="-0.6382"/> <atom id="S-2-Hydroxyacids1-atom7" elementType="C" x2="1.5732" y2="-2.1859"/> </atomArray> <bondArray> <bond id="S-2-Hydroxyacids1-bond1" atomRefs="S-2-Hydroxyacids1-atom7 S-2-Hydroxyacids1-atom6" order="1"/> <bond id="S-2-Hydroxyacids1-bond2" atomRefs="S-2-Hydroxyacids1-atom5 S-2-Hydroxyacids1-atom7" order="1"/> <bond id="S-2-Hydroxyacids1-bond3" atomRefs="S-2-Hydroxyacids1-atom4 S-2-Hydroxyacids1-atom7" order="1"/> <bond id="S-2-Hydroxyacids1-bond4" atomRefs="S-2-Hydroxyacids1-atom3 S-2-Hydroxyacids1-atom6" order="1"/> <bond id="S-2-Hydroxyacids1-bond5" atomRefs="S-2-Hydroxyacids1-atom2 S-2-Hydroxyacids1-atom6" order="2"/> <bond id="S-2-Hydroxyacids1-bond6" atomRefs="S-2-Hydroxyacids1-atom1 S-2-Hydroxyacids1-atom7" order="1"/> </bondArray> <formula concise="C 2 H 3 O 3 R1 1" formalCharge="0"/> <string title="smiles">C(=O)(O)[CH]([R1])O</string> </molecule> </cml>

unificationXref28572
type: unificationXref
DB: CapCyc
ID: S-2-Hydroxyacids1

phys-ent-participant27200
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27195
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27195
type: smallMolecule
MOLECULAR-WEIGHT: 34.015
NAME: H2O2
STRUCTURE: chemicalStructure27199
SYNONYMS: hydroperoxide
SYNONYMS: perhydrol
SYNONYMS: hydrogen peroxide
XREF: unificationXref27198
XREF: unificationXref27197
XREF: unificationXref27196

chemicalStructure27199
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HYDROGEN-PEROXIDE-atom1" elementType="O" x2="0.9967" y2="-1.0"/> <atom id="HYDROGEN-PEROXIDE-atom2" elementType="O" x2="-1.0" y2="-1.0"/> <bond id="HYDROGEN-PEROXIDE-bond1" atomRefs="HYDROGEN-PEROXIDE-atom2 HYDROGEN-PEROXIDE-atom1" order="1"/> <formula concise="H 2 O 2" formalCharge="0"/> 34.015 OO

unificationXref27198
type: unificationXref
DB: CapCyc
ID: HYDROGEN-PEROXIDE

unificationXref27197
type: unificationXref
DB: CAS
ID: 7722-84-1

unificationXref27196
type: unificationXref
DB: LIGAND
ID: C00027

phys-ent-participant28578
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28575
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28575
type: smallMolecule
COMMENT: This compound class stands for generic and unspecified 2-oxo acids.
NAME: a 2-oxo acid
STRUCTURE: chemicalStructure28577
SYNONYMS: 2-oxo acid
XREF: unificationXref28576

chemicalStructure28577
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="2-Oxo-Acids" title="a 2-oxo acid" dictRef="dict2-Oxo-Acids"> <atomArray> <atom id="2-Oxo-Acids-atom1" elementType="O" x2="0.22000003" y2="0.93999994"/> <atom id="2-Oxo-Acids-atom2" elementType="O" x2="0.9799999" y2="0.19999993"/> <atom id="2-Oxo-Acids-atom3" elementType="C" x2="0.22000003" y2="0.22000003"/> <atom id="2-Oxo-Acids-atom4" elementType="C" x2="-0.26" y2="-0.3"/> <atom id="2-Oxo-Acids-atom5" elementType="R" x2="-1.0" y2="0.19999993"/> <atom id="2-Oxo-Acids-atom6" elementType="O" x2="-0.26" y2="-1.0"/> </atomArray> <bondArray> <bond id="2-Oxo-Acids-bond1" atomRefs="2-Oxo-Acids-atom5 2-Oxo-Acids-atom4" order="1"/> <bond id="2-Oxo-Acids-bond2" atomRefs="2-Oxo-Acids-atom4 2-Oxo-Acids-atom6" order="2"/> <bond id="2-Oxo-Acids-bond3" atomRefs="2-Oxo-Acids-atom4 2-Oxo-Acids-atom3" order="1"/> <bond id="2-Oxo-Acids-bond4" atomRefs="2-Oxo-Acids-atom3 2-Oxo-Acids-atom2" order="2"/> <bond id="2-Oxo-Acids-bond5" atomRefs="2-Oxo-Acids-atom3 2-Oxo-Acids-atom1" order="1"/> </bondArray> <formula concise="C 2 H 1 O 3 R 1" formalCharge="0"/> </molecule> </cml>

unificationXref28576
type: unificationXref
DB: CapCyc
ID: 2-Oxo-Acids

unificationXref28570
type: unificationXref
DB: CapCyc
ID: (S)-2-HYDROXY-ACID-OXIDASE-RXN

phys-ent-participant28568
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28566
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28566
type: protein
NAME: glycolate oxidase
ORGANISM: bioSource20982
XREF: unificationXref28567

unificationXref28567
type: unificationXref
DB: CapCyc
ID: SGNU203857-MONOMER

unificationXref28580
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-645

catalysis28564
type: catalysis
CONTROLLED: biochemicalReaction28562
CONTROLLER: phys-ent-participant28568
NAME: glycolate oxidase
XREF: unificationXref28565

biochemicalReaction28562
type: biochemicalReaction
EC-NUMBER: 1.1.3.15
LEFT: phys-ent-participant24513
LEFT: phys-ent-participant23342
NAME: RXN-969
RIGHT: phys-ent-participant23094
RIGHT: phys-ent-participant27200
XREF: unificationXref28563

phys-ent-participant24513
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24508
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24508
type: smallMolecule
MOLECULAR-WEIGHT: 76.052
NAME: glycolate
STRUCTURE: chemicalStructure24512
SYNONYMS: hydroxyacetic acid
SYNONYMS: glycolic acid
XREF: unificationXref24511
XREF: unificationXref24510
XREF: unificationXref24509

chemicalStructure24512
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLYCOLLATE-atom1" elementType="C" x2="0.34017" y2="-0.60342"/> <atom id="GLYCOLLATE-atom2" elementType="C" x2="-0.34359" y2="-1.0"/> <atom id="GLYCOLLATE-atom3" elementType="O" x2="0.34017" y2="0.15214"/> <atom id="GLYCOLLATE-atom4" elementType="O" x2="0.99658" y2="-0.97949"/> <atom id="GLYCOLLATE-atom5" elementType="O" x2="-1.0" y2="-0.62393"/> <bond id="GLYCOLLATE-bond1" atomRefs="GLYCOLLATE-atom5 GLYCOLLATE-atom2" order="1"/> <bond id="GLYCOLLATE-bond2" atomRefs="GLYCOLLATE-atom4 GLYCOLLATE-atom1" order="1"/> <bond id="GLYCOLLATE-bond3" atomRefs="GLYCOLLATE-atom3 GLYCOLLATE-atom1" order="2"/> <bond id="GLYCOLLATE-bond4" atomRefs="GLYCOLLATE-atom2 GLYCOLLATE-atom1" order="1"/> <formula concise="C 2 H 4 O 3" formalCharge="0"/> 76.052 C(=O)(O)CO

unificationXref24511
type: unificationXref
DB: CapCyc
ID: GLYCOLLATE

unificationXref24510
type: unificationXref
DB: CAS
ID: 79-14-1

unificationXref24509
type: unificationXref
DB: LIGAND
ID: C00160

phys-ent-participant23094
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23089
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23089
type: smallMolecule
MOLECULAR-WEIGHT: 74.036
NAME: glyoxylate
STRUCTURE: chemicalStructure23093
SYNONYMS: glyoxalate
SYNONYMS: glyox
SYNONYMS: glyoxylic acid
XREF: unificationXref23092
XREF: unificationXref23091
XREF: unificationXref23090

chemicalStructure23093
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLYOX-atom1" elementType="C" x2="-0.49175" y2="-0.13861"/> <atom id="GLYOX-atom2" elementType="H" x2="0.9934" y2="0.72607"/> <atom id="GLYOX-atom3" elementType="C" x2="0.49835" y2="-0.13861"/> <atom id="GLYOX-atom4" elementType="O" x2="-0.9835" y2="0.72937"/> <atom id="GLYOX-atom5" elementType="O" x2="0.9967" y2="-1.0"/> <atom id="GLYOX-atom6" elementType="O" x2="-1.0" y2="-0.9967"/> <bond id="GLYOX-bond1" atomRefs="GLYOX-atom6 GLYOX-atom1" order="1"/> <bond id="GLYOX-bond2" atomRefs="GLYOX-atom5 GLYOX-atom3" order="2"/> <bond id="GLYOX-bond3" atomRefs="GLYOX-atom4 GLYOX-atom1" order="2"/> <bond id="GLYOX-bond4" atomRefs="GLYOX-atom3 GLYOX-atom1" order="1"/> <bond id="GLYOX-bond5" atomRefs="GLYOX-atom2 GLYOX-atom3" order="1"/> <formula concise="C 2 H 2 O 3" formalCharge="0"/> 74.036 C(=O)(O)[CH]=O

unificationXref23092
type: unificationXref
DB: CapCyc
ID: GLYOX

unificationXref23091
type: unificationXref
DB: CAS
ID: 298-12-4

unificationXref23090
type: unificationXref
DB: LIGAND
ID: C00048

unificationXref28563
type: unificationXref
DB: CapCyc
ID: RXN-969

unificationXref28565
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-646

catalysis28558
type: catalysis
CONTROLLED: biochemicalReaction28556
CONTROLLER: phys-ent-participant28543
NAME: GLYCEROL-3-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28559

biochemicalReaction28556
type: biochemicalReaction
EC-NUMBER: 1.1.99.5
LEFT: phys-ent-participant24410
LEFT: phys-ent-participant27656
NAME: Glycerol-3-phosphate dehydrogenase
RIGHT: phys-ent-participant22063
RIGHT: phys-ent-participant27661
XREF: unificationXref28557

phys-ent-participant24410
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24405
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24405
type: smallMolecule
MOLECULAR-WEIGHT: 172.074
NAME: glycerol-3-phosphate
STRUCTURE: chemicalStructure24409
SYNONYMS: α-glycerophosphoric acid
SYNONYMS: glycerol-3-P
SYNONYMS: sn-glycerol-3-phosphate
SYNONYMS: α-glycerophosphate
SYNONYMS: D-glycerol-3-phosphate
SYNONYMS: rac-Glycerol 3-phosphate
XREF: unificationXref24408
XREF: unificationXref24407
XREF: unificationXref24406

chemicalStructure24409
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLYCEROL-3P-atom1" elementType="O" x2="6.3223" y2="-2.5182"/> <atom id="GLYCEROL-3P-atom2" elementType="O" x2="0.0" y2="-2.3197"/> <atom id="GLYCEROL-3P-atom3" elementType="O" x2="2.9469" y2="0.0"/> <atom id="GLYCEROL-3P-atom4" elementType="O" x2="6.0193" y2="-4.5456"/> <atom id="GLYCEROL-3P-atom5" elementType="O" x2="3.9709" y2="-4.1904"/> <atom id="GLYCEROL-3P-atom6" elementType="C" x2="0.8777" y2="-1.1807"/> <atom id="GLYCEROL-3P-atom7" elementType="C" x2="2.9365" y2="-2.2047"/> <atom id="GLYCEROL-3P-atom8" elementType="O" x2="4.3367" y2="-2.2047"/> <atom id="GLYCEROL-3P-atom9" elementType="C" x2="2.1215" y2="-1.1807"/> <atom id="GLYCEROL-3P-atom10" elementType="P" x2="5.1624" y2="-3.3753"/> <bond id="GLYCEROL-3P-bond1" atomRefs="GLYCEROL-3P-atom8 GLYCEROL-3P-atom10" order="1"/> <bond id="GLYCEROL-3P-bond2" atomRefs="GLYCEROL-3P-atom7 GLYCEROL-3P-atom9" order="1"/> <bond id="GLYCEROL-3P-bond3" atomRefs="GLYCEROL-3P-atom7 GLYCEROL-3P-atom8" order="1"/> <bond id="GLYCEROL-3P-bond4" atomRefs="GLYCEROL-3P-atom6 GLYCEROL-3P-atom9" order="1"/> <bond id="GLYCEROL-3P-bond5" atomRefs="GLYCEROL-3P-atom5 GLYCEROL-3P-atom10" order="1"/> <bond id="GLYCEROL-3P-bond6" atomRefs="GLYCEROL-3P-atom4 GLYCEROL-3P-atom10" order="1"/> <bond id="GLYCEROL-3P-bond7" atomRefs="GLYCEROL-3P-atom9 GLYCEROL-3P-atom3" order="1"/> <bond id="GLYCEROL-3P-bond8" atomRefs="GLYCEROL-3P-atom2 GLYCEROL-3P-atom6" order="1"/> <bond id="GLYCEROL-3P-bond9" atomRefs="GLYCEROL-3P-atom1 GLYCEROL-3P-atom10" order="2"/> <formula concise="C 3 H 9 O 6 P 1" formalCharge="0"/> 172.074 C(O)C(O)COP(O)(O)=O

unificationXref24408
type: unificationXref
DB: CapCyc
ID: GLYCEROL-3P

unificationXref24407
type: unificationXref
DB: CAS
ID: 57-03-4

unificationXref24406
type: unificationXref
DB: LIGAND
ID: C00093

phys-ent-participant27656
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27651
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27651
type: smallMolecule
MOLECULAR-WEIGHT: 727.121
NAME: ubiquinone-8
STRUCTURE: chemicalStructure27655
SYNONYMS: ubiquinone(9)
SYNONYMS: coenzyme-Q8
SYNONYMS: Q-9
XREF: unificationXref27654
XREF: unificationXref27653
XREF: unificationXref27652

chemicalStructure27655
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UBIQUINONE-8-atom1" elementType="C" x2="0.0" y2="-0.4979"/> <atom id="UBIQUINONE-8-atom2" elementType="C" x2="0.5863" y2="-5.7229"/> <atom id="UBIQUINONE-8-atom3" elementType="C" x2="38.5385" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom4" elementType="C" x2="39.2911" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom5" elementType="C" x2="34.3993" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom6" elementType="C" x2="30.2602" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom7" elementType="C" x2="26.1211" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom8" elementType="C" x2="21.9819" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom9" elementType="C" x2="17.8428" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom10" elementType="C" x2="13.7036" y2="-5.7627"/> <atom id="UBIQUINONE-8-atom11" elementType="C" x2="9.4578" y2="-6.0433"/> <atom id="UBIQUINONE-8-atom12" elementType="C" x2="6.9098" y2="-1.5476"/> <atom id="UBIQUINONE-8-atom13" elementType="O" x2="4.3031" y2="0.0"/> <atom id="UBIQUINONE-8-atom14" elementType="O" x2="4.2463" y2="-6.0433"/> <atom id="UBIQUINONE-8-atom15" elementType="C" x2="37.4354" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom16" elementType="C" x2="33.2963" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom17" elementType="C" x2="29.1571" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom18" elementType="C" x2="25.018" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom19" elementType="C" x2="20.8788" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom20" elementType="C" x2="16.7397" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom21" elementType="C" x2="12.6006" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom22" elementType="C" x2="8.1985" y2="-3.7817"/> <atom id="UBIQUINONE-8-atom23" elementType="C" x2="36.3067" y2="-4.7094"/> <atom id="UBIQUINONE-8-atom24" elementType="C" x2="32.1676" y2="-4.7094"/> <atom id="UBIQUINONE-8-atom25" elementType="C" x2="28.0284" y2="-4.7094"/> <atom id="UBIQUINONE-8-atom26" elementType="C" x2="23.8891" y2="-4.7094"/> <atom id="UBIQUINONE-8-atom27" elementType="C" x2="19.7499" y2="-4.7094"/>…

unificationXref27654
type: unificationXref
DB: CapCyc
ID: UBIQUINONE-8

unificationXref27653
type: unificationXref
DB: LIGAND
ID: C00399

unificationXref27652
type: unificationXref
DB: CAS
ID: 1339-63-5

phys-ent-participant22063
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22058
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22058
type: smallMolecule
MOLECULAR-WEIGHT: 170.058
NAME: dihydroxy-acetone-phosphate
STRUCTURE: chemicalStructure22062
SYNONYMS: DHAP
SYNONYMS: glycerone-phosphate
SYNONYMS: dihydroxyacetone 3-phosphate
SYNONYMS: dihydroxyacetone-P
SYNONYMS: di-OH-acetone-P
SYNONYMS: dihydroxyacetone-phosphate
XREF: unificationXref22061
XREF: unificationXref22060
XREF: unificationXref22059

chemicalStructure22062
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom1" elementType="O" x2="0.60784" y2="-1.0"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom2" elementType="O" x2="-1.0" y2="-0.53922"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom3" elementType="P" x2="0.60784" y2="-0.61111"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom4" elementType="O" x2="-0.38562" y2="-0.21242"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom5" elementType="C" x2="-0.38562" y2="-0.60131"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom6" elementType="O" x2="0.19608" y2="-0.61111"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom7" elementType="C" x2="-0.68954" y2="-0.77451"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom8" elementType="O" x2="0.99673" y2="-0.61111"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom9" elementType="O" x2="0.60784" y2="-0.22222"/> <atom id="DIHYDROXY-ACETONE-PHOSPHATE-atom10" elementType="C" x2="-0.07843" y2="-0.77451"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond1" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom10 DIHYDROXY-ACETONE-PHOSPHATE-atom6" order="1"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond2" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom9 DIHYDROXY-ACETONE-PHOSPHATE-atom3" order="2"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond3" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom8 DIHYDROXY-ACETONE-PHOSPHATE-atom3" order="1"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond4" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom7 DIHYDROXY-ACETONE-PHOSPHATE-atom5" order="1"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond5" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom6 DIHYDROXY-ACETONE-PHOSPHATE-atom3" order="1"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond6" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom5 DIHYDROXY-ACETONE-PHOSPHATE-atom10" order="1"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond7" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom4 DIHYDROXY-ACETONE-PHOSPHATE-atom5" order="2"/> <bond id="DIHYDROXY-ACETONE-PHOSPHATE-bond8" atomRefs="DIHYDROXY-ACETONE-PHOSPHATE-atom2 DIHYDROXY-ACETONE-PHOSPHATE-atom7" order="1"/> <bond id="DI…

unificationXref22061
type: unificationXref
DB: CapCyc
ID: DIHYDROXY-ACETONE-PHOSPHATE

unificationXref22060
type: unificationXref
DB: CAS
ID: 57-04-5

unificationXref22059
type: unificationXref
DB: LIGAND
ID: C00111

phys-ent-participant27661
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27657
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27657
type: smallMolecule
MOLECULAR-WEIGHT: 731.153
NAME: ubiquinol-8
STRUCTURE: chemicalStructure27660
SYNONYMS: ubiquinol(8)
XREF: unificationXref27659
XREF: unificationXref27658

chemicalStructure27660
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UBIQUINOL-8-atom1" elementType="C" x2="0.0" y2="-0.4979"/> <atom id="UBIQUINOL-8-atom2" elementType="C" x2="0.5863" y2="-5.723"/> <atom id="UBIQUINOL-8-atom3" elementType="C" x2="39.2916" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom4" elementType="C" x2="38.539" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom5" elementType="C" x2="34.3997" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom6" elementType="C" x2="30.2606" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom7" elementType="C" x2="26.1214" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom8" elementType="C" x2="21.9822" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom9" elementType="C" x2="17.843" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom10" elementType="C" x2="13.7038" y2="-5.7628"/> <atom id="UBIQUINOL-8-atom11" elementType="C" x2="9.4579" y2="-6.0434"/> <atom id="UBIQUINOL-8-atom12" elementType="C" x2="6.9099" y2="-1.5476"/> <atom id="UBIQUINOL-8-atom13" elementType="O" x2="4.3032" y2="0.0"/> <atom id="UBIQUINOL-8-atom14" elementType="O" x2="4.3295" y2="-6.2407"/> <atom id="UBIQUINOL-8-atom15" elementType="C" x2="37.4359" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom16" elementType="C" x2="33.2967" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom17" elementType="C" x2="29.1575" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom18" elementType="C" x2="25.0183" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom19" elementType="C" x2="20.8791" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom20" elementType="C" x2="16.7399" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom21" elementType="C" x2="12.6008" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom22" elementType="C" x2="8.1986" y2="-3.7817"/> <atom id="UBIQUINOL-8-atom23" elementType="C" x2="36.3072" y2="-4.7095"/> <atom id="UBIQUINOL-8-atom24" elementType="C" x2="32.168" y2="-4.7095"/> <atom id="UBIQUINOL-8-atom25" elementType="C" x2="28.0288" y2="-4.7095"/> <atom id="UBIQUINOL-8-atom26" elementType="C" x2="23.8894" y2="-4.7095"/> <atom id="UBIQUINOL-8-atom27" elementType="C" x2="19.7501" y2="-4.7095"/> <atom id="UBIQUINOL-8-atom28"…

unificationXref27659
type: unificationXref
DB: CapCyc
ID: UBIQUINOL-8

unificationXref27658
type: unificationXref
DB: LIGAND
ID: C00390

unificationXref28557
type: unificationXref
DB: CapCyc
ID: GLYC3PDEHYDROG-RXN

phys-ent-participant28543
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28541
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28541
type: protein
NAME: GLYCEROL-3-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref28542

unificationXref28542
type: unificationXref
DB: CapCyc
ID: SGNU204348-MONOMER

unificationXref28559
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-674

catalysis28554
type: catalysis
CONTROLLED: biochemicalReaction28552
CONTROLLER: phys-ent-participant28543
NAME: GLYCEROL-3-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28555

biochemicalReaction28552
type: biochemicalReaction
EC-NUMBER: 1.1.99.5
LEFT: phys-ent-participant27179
LEFT: phys-ent-participant24410
NAME: Glycerol-3-phosphate dehydrogenase
RIGHT: phys-ent-participant27182
RIGHT: phys-ent-participant22063
XREF: unificationXref28553

phys-ent-participant27179
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27177
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27177
type: smallMolecule
MOLECULAR-WEIGHT: 0.0
NAME: an acceptor
SYNONYMS: oxidized electron acceptor
SYNONYMS: oxidized donor
SYNONYMS: A
XREF: unificationXref27178

unificationXref27178
type: unificationXref
DB: CapCyc
ID: Acceptor

phys-ent-participant27182
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27180
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27180
type: smallMolecule
MOLECULAR-WEIGHT: 2.016
NAME: a reduced acceptor
SYNONYMS: reduced electron acceptor
SYNONYMS: donor
SYNONYMS: A(H2)
XREF: unificationXref27181

unificationXref27181
type: unificationXref
DB: CapCyc
ID: Donor-H2

unificationXref28553
type: unificationXref
DB: CapCyc
ID: GLYCEROL-3-PHOSPHATE-DEHYDROGENASE-RXN

unificationXref28555
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-675

catalysis28539
type: catalysis
CONTROLLED: biochemicalReaction28537
CONTROLLER: phys-ent-participant28543
NAME: GLYCEROL-3-PHOSPHATE DEHYDROGENASE
XREF: unificationXref28540

biochemicalReaction28537
type: biochemicalReaction
EC-NUMBER: 1.1.99.5
LEFT: phys-ent-participant24410
LEFT: phys-ent-participant27278
NAME: RXN-6841
RIGHT: phys-ent-participant22063
RIGHT: phys-ent-participant27290
XREF: unificationXref28538

unificationXref28538
type: unificationXref
DB: CapCyc
ID: RXN-6841

unificationXref28540
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-676

catalysis28523
type: catalysis
CONTROLLED: biochemicalReaction28506
CONTROLLER: phys-ent-participant28527
NAME: CATALASE
XREF: unificationXref28524

biochemicalReaction28506
type: biochemicalReaction
EC-NUMBER: 1.11.1.6
LEFT: phys-ent-participant27414
NAME: Catalase
RIGHT: phys-ent-participant22765
RIGHT: phys-ent-participant23342
XREF: unificationXref28507

phys-ent-participant27414
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27195
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref28507
type: unificationXref
DB: CapCyc
ID: CATAL-RXN

phys-ent-participant28527
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28525
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28525
type: protein
NAME: CATALASE
ORGANISM: bioSource20982
XREF: unificationXref28526

unificationXref28526
type: unificationXref
DB: CapCyc
ID: SGNU196156-MONOMER

unificationXref28524
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-12

catalysis28518
type: catalysis
CONTROLLED: biochemicalReaction28506
CONTROLLER: phys-ent-participant28522
NAME: CATALASE
XREF: unificationXref28519

phys-ent-participant28522
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28520
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28520
type: protein
NAME: CATALASE
ORGANISM: bioSource20982
XREF: unificationXref28521

unificationXref28521
type: unificationXref
DB: CapCyc
ID: SGNU196262-MONOMER

unificationXref28519
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-23

catalysis28513
type: catalysis
CONTROLLED: biochemicalReaction28506
CONTROLLER: phys-ent-participant28517
NAME: CATALASE
XREF: unificationXref28514

phys-ent-participant28517
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28515
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28515
type: protein
NAME: CATALASE
ORGANISM: bioSource20982
XREF: unificationXref28516

unificationXref28516
type: unificationXref
DB: CapCyc
ID: SGNU196648-MONOMER

unificationXref28514
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-79

catalysis28508
type: catalysis
CONTROLLED: biochemicalReaction28506
CONTROLLER: phys-ent-participant28512
NAME: CATALASE
XREF: unificationXref28509

phys-ent-participant28512
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28510
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28510
type: protein
NAME: CATALASE
ORGANISM: bioSource20982
XREF: unificationXref28511

unificationXref28511
type: unificationXref
DB: CapCyc
ID: SGNU198893-MONOMER

unificationXref28509
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-335

catalysis28489
type: catalysis
CONTROLLED: biochemicalReaction28478
CONTROLLER: phys-ent-participant28493
NAME: HOMOGENTISATE 1,2-DIOXYGENASE
XREF: unificationXref28490

biochemicalReaction28478
type: biochemicalReaction
EC-NUMBER: 1.13.11.5
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant28483
NAME: Homogentisate 1,2-dioxygenase
RIGHT: phys-ent-participant22173
SYNONYMS: Homogentisic acid oxidase
SYNONYMS: Homogentisate oxygenase
SYNONYMS: Homogentisicase
XREF: unificationXref28479

phys-ent-participant28483
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28480
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28480
type: smallMolecule
MOLECULAR-WEIGHT: 168.149
NAME: homogentisate
STRUCTURE: chemicalStructure28482
XREF: unificationXref28481

chemicalStructure28482
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HOMOGENTISATE-atom1" elementType="C" x2="-0.66951" y2="-0.78194"/> <atom id="HOMOGENTISATE-atom2" elementType="O" x2="0.99659" y2="-0.96593"/> <atom id="HOMOGENTISATE-atom3" elementType="C" x2="-0.06644" y2="-0.78194"/> <atom id="HOMOGENTISATE-atom4" elementType="O" x2="0.67973" y2="-0.36968"/> <atom id="HOMOGENTISATE-atom5" elementType="C" x2="-0.06644" y2="-0.43441"/> <atom id="HOMOGENTISATE-atom6" elementType="C" x2="0.67973" y2="-0.75128"/> <atom id="HOMOGENTISATE-atom7" elementType="C" x2="-0.66951" y2="-0.43441"/> <atom id="HOMOGENTISATE-atom8" elementType="C" x2="-0.36627" y2="-0.26065"/> <atom id="HOMOGENTISATE-atom9" elementType="C" x2="0.32879" y2="-1.0"/> <atom id="HOMOGENTISATE-atom10" elementType="O" x2="-1.0" y2="-0.97274"/> <atom id="HOMOGENTISATE-atom11" elementType="O" x2="0.26405" y2="-0.24361"/> <atom id="HOMOGENTISATE-atom12" elementType="C" x2="-0.36627" y2="-0.95571"/> <bond id="HOMOGENTISATE-bond1" atomRefs="HOMOGENTISATE-atom12 HOMOGENTISATE-atom3" order="A"/> <bond id="HOMOGENTISATE-bond2" atomRefs="HOMOGENTISATE-atom11 HOMOGENTISATE-atom5" order="1"/> <bond id="HOMOGENTISATE-bond3" atomRefs="HOMOGENTISATE-atom10 HOMOGENTISATE-atom1" order="1"/> <bond id="HOMOGENTISATE-bond4" atomRefs="HOMOGENTISATE-atom9 HOMOGENTISATE-atom3" order="1"/> <bond id="HOMOGENTISATE-bond5" atomRefs="HOMOGENTISATE-atom8 HOMOGENTISATE-atom7" order="A"/> <bond id="HOMOGENTISATE-bond6" atomRefs="HOMOGENTISATE-atom5 HOMOGENTISATE-atom8" order="A"/> <bond id="HOMOGENTISATE-bond7" atomRefs="HOMOGENTISATE-atom7 HOMOGENTISATE-atom1" order="A"/> <bond id="HOMOGENTISATE-bond8" atomRefs="HOMOGENTISATE-atom6 HOMOGENTISATE-atom9" order="1"/> <bond id="HOMOGENTISATE-bond9" atomRefs="HOMOGENTISATE-atom3 HOMOGENTISATE-atom5" order="A"/> <bond id="HOMOGENTISATE-bond10" atomRefs="HOMOGENTISATE-atom4 HOMOGENTISATE-atom6" order="2"/> <bond id="HOMOGENTISATE-bond11" atomRefs="HOMOGENTISATE-atom2 HOMOGENTISATE-atom6" order="1"/> <bond id="HOMOGENTISATE-bond12" atomRefs="HOMOG…

unificationXref28481
type: unificationXref
DB: CapCyc
ID: HOMOGENTISATE

phys-ent-participant22173
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22170
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22170
type: smallMolecule
MOLECULAR-WEIGHT: 200.148
NAME: 4-maleyl-acetoacetate
STRUCTURE: chemicalStructure22172
XREF: unificationXref22171

chemicalStructure22172
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-MALEYL-ACETOACETATE-atom1" elementType="C" x2="-0.15512" y2="-0.75908"/> <atom id="4-MALEYL-ACETOACETATE-atom2" elementType="O" x2="0.57096" y2="-0.0363"/> <atom id="4-MALEYL-ACETOACETATE-atom3" elementType="O" x2="0.9967" y2="-0.28383"/> <atom id="4-MALEYL-ACETOACETATE-atom4" elementType="C" x2="0.55776" y2="-0.52145"/> <atom id="4-MALEYL-ACETOACETATE-atom5" elementType="C" x2="-0.29373" y2="-0.50825"/> <atom id="4-MALEYL-ACETOACETATE-atom6" elementType="C" x2="-0.71617" y2="-0.25413"/> <atom id="4-MALEYL-ACETOACETATE-atom7" elementType="C" x2="0.71287" y2="-0.28383"/> <atom id="4-MALEYL-ACETOACETATE-atom8" elementType="O" x2="-1.0" y2="-0.25413"/> <atom id="4-MALEYL-ACETOACETATE-atom9" elementType="O" x2="-0.56766" y2="-0.0132"/> <atom id="4-MALEYL-ACETOACETATE-atom10" elementType="C" x2="0.12541" y2="-0.75908"/> <atom id="4-MALEYL-ACETOACETATE-atom11" elementType="C" x2="0.27723" y2="-0.52145"/> <atom id="4-MALEYL-ACETOACETATE-atom12" elementType="O" x2="-0.30033" y2="-1.0"/> <atom id="4-MALEYL-ACETOACETATE-atom13" elementType="O" x2="0.13861" y2="-0.27063"/> <atom id="4-MALEYL-ACETOACETATE-atom14" elementType="C" x2="-0.56766" y2="-0.50825"/> <bond id="4-MALEYL-ACETOACETATE-bond1" atomRefs="4-MALEYL-ACETOACETATE-atom14 4-MALEYL-ACETOACETATE-atom5" order="2"/> <bond id="4-MALEYL-ACETOACETATE-bond2" atomRefs="4-MALEYL-ACETOACETATE-atom13 4-MALEYL-ACETOACETATE-atom11" order="2"/> <bond id="4-MALEYL-ACETOACETATE-bond3" atomRefs="4-MALEYL-ACETOACETATE-atom12 4-MALEYL-ACETOACETATE-atom1" order="2"/> <bond id="4-MALEYL-ACETOACETATE-bond4" atomRefs="4-MALEYL-ACETOACETATE-atom11 4-MALEYL-ACETOACETATE-atom4" order="1"/> <bond id="4-MALEYL-ACETOACETATE-bond5" atomRefs="4-MALEYL-ACETOACETATE-atom10 4-MALEYL-ACETOACETATE-atom11" order="1"/> <bond id="4-MALEYL-ACETOACETATE-bond6" atomRefs="4-MALEYL-ACETOACETATE-atom9 4-MALEYL-ACETOACETATE-atom6" order="1"/> <bond id="4-MALEYL-ACETOACETATE-bond7" atomRefs="4-MALEYL-ACETOACETATE-atom8 4-MALEYL-ACETOACETATE-atom6" or…

unificationXref22171
type: unificationXref
DB: CapCyc
ID: 4-MALEYL-ACETOACETATE

unificationXref28479
type: unificationXref
DB: CapCyc
ID: HOMOGENTISATE-1,2-DIOXYGENASE-RXN

phys-ent-participant28493
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28491
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28491
type: protein
NAME: HOMOGENTISATE 1,2-DIOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28492

unificationXref28492
type: unificationXref
DB: CapCyc
ID: SGNU197547-MONOMER

unificationXref28490
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-196

catalysis28484
type: catalysis
CONTROLLED: biochemicalReaction28478
CONTROLLER: phys-ent-participant28488
NAME: HOMOGENTISATE 1,2-DIOXYGENASE
XREF: unificationXref28485

phys-ent-participant28488
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28486
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28486
type: protein
NAME: HOMOGENTISATE 1,2-DIOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28487

unificationXref28487
type: unificationXref
DB: CapCyc
ID: SGNU200102-MONOMER

unificationXref28485
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-403

catalysis28476
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28446
NAME: lipoxygenase
XREF: unificationXref28477

biochemicalReaction28447
type: biochemicalReaction
EC-NUMBER: 1.13.11.12
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant28453
NAME: Lipoxygenase
RIGHT: phys-ent-participant28457
SYNONYMS: Lipoperoxidase
SYNONYMS: Carotene oxidase
SYNONYMS: Lipoxidase
XREF: unificationXref28448

phys-ent-participant28453
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28449
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28449
type: smallMolecule
MOLECULAR-WEIGHT: 280.45
NAME: linoleate
STRUCTURE: chemicalStructure28452
SYNONYMS: linoleic acid
SYNONYMS: linoleate
SYNONYMS: 9,12-linoleic acid
SYNONYMS: (9Z,12Z)-octadeca-9,12-dienoate
XREF: unificationXref28451
XREF: unificationXref28450

chemicalStructure28452
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LINOLEIC_ACID-atom1" elementType="C" x2="9.6996" y2="0.0"/> <atom id="LINOLEIC_ACID-atom2" elementType="O" x2="1.2124" y2="-10.4999"/> <atom id="LINOLEIC_ACID-atom3" elementType="O" x2="0.0" y2="-8.3999"/> <atom id="LINOLEIC_ACID-atom4" elementType="C" x2="13.3368" y2="-6.3"/> <atom id="LINOLEIC_ACID-atom5" elementType="C" x2="12.1243" y2="-8.4"/> <atom id="LINOLEIC_ACID-atom6" elementType="C" x2="13.3368" y2="-4.9"/> <atom id="LINOLEIC_ACID-atom7" elementType="C" x2="10.9119" y2="-9.1"/> <atom id="LINOLEIC_ACID-atom8" elementType="C" x2="10.912" y2="-0.7"/> <atom id="LINOLEIC_ACID-atom9" elementType="C" x2="12.1243" y2="-7.0"/> <atom id="LINOLEIC_ACID-atom10" elementType="C" x2="12.1244" y2="-4.2"/> <atom id="LINOLEIC_ACID-atom11" elementType="C" x2="9.6995" y2="-8.4"/> <atom id="LINOLEIC_ACID-atom12" elementType="C" x2="10.912" y2="-2.1"/> <atom id="LINOLEIC_ACID-atom13" elementType="C" x2="12.1244" y2="-2.8"/> <atom id="LINOLEIC_ACID-atom14" elementType="C" x2="8.487" y2="-9.1"/> <atom id="LINOLEIC_ACID-atom15" elementType="C" x2="7.2746" y2="-8.4"/> <atom id="LINOLEIC_ACID-atom16" elementType="C" x2="6.0621" y2="-9.1"/> <atom id="LINOLEIC_ACID-atom17" elementType="C" x2="4.8497" y2="-8.3999"/> <atom id="LINOLEIC_ACID-atom18" elementType="C" x2="3.6373" y2="-9.0999"/> <atom id="LINOLEIC_ACID-atom19" elementType="C" x2="2.4248" y2="-8.3999"/> <atom id="LINOLEIC_ACID-atom20" elementType="C" x2="1.2124" y2="-9.0999"/> <bond id="LINOLEIC_ACID-bond1" atomRefs="LINOLEIC_ACID-atom19 LINOLEIC_ACID-atom20" order="1"/> <bond id="LINOLEIC_ACID-bond2" atomRefs="LINOLEIC_ACID-atom18 LINOLEIC_ACID-atom19" order="1"/> <bond id="LINOLEIC_ACID-bond3" atomRefs="LINOLEIC_ACID-atom17 LINOLEIC_ACID-atom18" order="1"/> <bond id="LINOLEIC_ACID-bond4" atomRefs="LINOLEIC_ACID-atom16 LINOLEIC_ACID-atom17" order="1"/> <bond id="LINOLEIC_ACID-bond5" atomRefs="LINOLEIC_ACID-atom15 LINOLEIC_ACID-atom16" order="1"/> <bond id="LINOLEIC_ACID-bond6" atomRefs="LINOLEIC_ACID-atom14 LINOLE…

unificationXref28451
type: unificationXref
DB: CapCyc
ID: LINOLEIC_ACID

unificationXref28450
type: unificationXref
DB: CAS
ID: 60-33-3

phys-ent-participant28457
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28454
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28454
type: smallMolecule
MOLECULAR-WEIGHT: 312.448
NAME: 13(S)-hydroperoxyoctadeca-9,11-dienoate
STRUCTURE: chemicalStructure28456
SYNONYMS: (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate
XREF: unificationXref28455

chemicalStructure28456
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom1" elementType="C" x2="8.487" y2="-1.3999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom2" elementType="O" x2="1.2124" y2="-5.5998"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom3" elementType="O" x2="15.7617" y2="0.0"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom4" elementType="O" x2="0.0" y2="-3.4998"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom5" elementType="C" x2="12.1243" y2="-3.5"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom6" elementType="C" x2="13.3368" y2="-4.2"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom7" elementType="C" x2="10.9119" y2="-4.1999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom8" elementType="C" x2="14.5492" y2="-3.5"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom9" elementType="C" x2="9.6995" y2="-2.0999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom10" elementType="C" x2="9.6995" y2="-3.4999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom11" elementType="C" x2="10.9119" y2="-1.3999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom12" elementType="C" x2="8.487" y2="-4.1999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom13" elementType="C" x2="7.2746" y2="-3.4999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom14" elementType="C" x2="6.0621" y2="-4.1999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom15" elementType="C" x2="4.8497" y2="-3.4999"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom16" elementType="C" x2="3.6373" y2="-4.1998"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom17" elementType="C" x2="12.1243" y2="-2.1"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom18" elementType="C" x2="2.4248" y2="-3.4998"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom19" elementType="C" x2="13.3368" y2="-1.4"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom20" elementType="O" x2="15.7617" y2="-1.4"/> <atom id="13-HYDROPEROXYOCTADECA-911-DIENOATE-atom21" elementType="C" x2="1.2124" y2="-…

unificationXref28455
type: unificationXref
DB: CapCyc
ID: 13-HYDROPEROXYOCTADECA-911-DIENOATE

unificationXref28448
type: unificationXref
DB: CapCyc
ID: LIPOXYGENASE-RXN

phys-ent-participant28446
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28444
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28444
type: protein
NAME: lipoxygenase
ORGANISM: bioSource20982
XREF: unificationXref28445

unificationXref28445
type: unificationXref
DB: CapCyc
ID: SGNU196043-MONOMER

unificationXref28477
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-6

catalysis28474
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28441
NAME: lipoxygenase
XREF: unificationXref28475

phys-ent-participant28441
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28439
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28439
type: protein
NAME: lipoxygenase
ORGANISM: bioSource20982
XREF: unificationXref28440

unificationXref28440
type: unificationXref
DB: CapCyc
ID: SGNU196334-MONOMER

unificationXref28475
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-43

catalysis28472
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28436
NAME: LIPOXYGENASE
XREF: unificationXref28473

phys-ent-participant28436
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28434
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28434
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28435

unificationXref28435
type: unificationXref
DB: CapCyc
ID: SGNU197100-MONOMER

unificationXref28473
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-138

catalysis28470
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28431
NAME: LIPOXYGENASE
XREF: unificationXref28471

phys-ent-participant28431
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28429
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28429
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28430

unificationXref28430
type: unificationXref
DB: CapCyc
ID: SGNU198444-MONOMER

unificationXref28471
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-298

catalysis28468
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28426
NAME: LIPOXYGENASE
XREF: unificationXref28469

phys-ent-participant28426
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28424
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28424
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28425

unificationXref28425
type: unificationXref
DB: CapCyc
ID: SGNU198710-MONOMER

unificationXref28469
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-323

catalysis28466
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28421
NAME: lipoxygenase
XREF: unificationXref28467

phys-ent-participant28421
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28419
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28419
type: protein
NAME: lipoxygenase
ORGANISM: bioSource20982
XREF: unificationXref28420

unificationXref28420
type: unificationXref
DB: CapCyc
ID: SGNU198874-MONOMER

unificationXref28467
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-333

catalysis28464
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28416
NAME: LIPOXYGENASE
XREF: unificationXref28465

phys-ent-participant28416
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28414
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28414
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28415

unificationXref28415
type: unificationXref
DB: CapCyc
ID: SGNU201538-MONOMER

unificationXref28465
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-497

catalysis28462
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28411
NAME: lipoxygenase
XREF: unificationXref28463

phys-ent-participant28411
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28409
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28409
type: protein
NAME: lipoxygenase
ORGANISM: bioSource20982
XREF: unificationXref28410

unificationXref28410
type: unificationXref
DB: CapCyc
ID: SGNU202346-MONOMER

unificationXref28463
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-561

catalysis28460
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28406
NAME: LIPOXYGENASE
XREF: unificationXref28461

phys-ent-participant28406
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28404
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28404
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28405

unificationXref28405
type: unificationXref
DB: CapCyc
ID: SGNU203480-MONOMER

unificationXref28461
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-619

catalysis28458
type: catalysis
CONTROLLED: biochemicalReaction28447
CONTROLLER: phys-ent-participant28401
NAME: LIPOXYGENASE
XREF: unificationXref28459

phys-ent-participant28401
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28399
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28399
type: protein
NAME: LIPOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref28400

unificationXref28400
type: unificationXref
DB: CapCyc
ID: SGNU203944-MONOMER

unificationXref28459
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-650

catalysis28442
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28446
NAME: lipoxygenase
XREF: unificationXref28443

biochemicalReaction28395
type: biochemicalReaction
EC-NUMBER: 1.13.11.12
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant24639
NAME: RXN-1321
RIGHT: phys-ent-participant22651
XREF: unificationXref28396

phys-ent-participant24639
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24635
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24635
type: smallMolecule
MOLECULAR-WEIGHT: 278.434
NAME: linolenate
STRUCTURE: chemicalStructure24638
SYNONYMS: linolenic acid
XREF: unificationXref24637
XREF: unificationXref24636

chemicalStructure24638
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LINOLENIC_ACID-atom1" elementType="C" x2="-0.16502" y2="-0.33003"/> <atom id="LINOLENIC_ACID-atom2" elementType="O" x2="0.70957" y2="0.46205"/> <atom id="LINOLENIC_ACID-atom3" elementType="C" x2="-1.0" y2="-0.80528"/> <atom id="LINOLENIC_ACID-atom4" elementType="C" x2="0.70957" y2="0.13201"/> <atom id="LINOLENIC_ACID-atom5" elementType="C" x2="-0.71287" y2="-0.33003"/> <atom id="LINOLENIC_ACID-atom6" elementType="C" x2="0.12871" y2="-0.50165"/> <atom id="LINOLENIC_ACID-atom7" elementType="O" x2="0.43564" y2="0.31683"/> <atom id="LINOLENIC_ACID-atom8" elementType="C" x2="0.12871" y2="-0.80528"/> <atom id="LINOLENIC_ACID-atom9" elementType="C" x2="-0.16502" y2="-0.0198"/> <atom id="LINOLENIC_ACID-atom10" elementType="C" x2="0.41584" y2="-0.35974"/> <atom id="LINOLENIC_ACID-atom11" elementType="C" x2="-1.0" y2="-0.50165"/> <atom id="LINOLENIC_ACID-atom12" elementType="C" x2="0.41584" y2="-0.0198"/> <atom id="LINOLENIC_ACID-atom13" elementType="C" x2="-0.16502" y2="-1.0"/> <atom id="LINOLENIC_ACID-atom14" elementType="C" x2="0.9967" y2="-0.0495"/> <atom id="LINOLENIC_ACID-atom15" elementType="C" x2="-0.43564" y2="-0.50165"/> <atom id="LINOLENIC_ACID-atom16" elementType="C" x2="-0.43564" y2="-0.84488"/> <atom id="LINOLENIC_ACID-atom17" elementType="C" x2="0.12871" y2="0.12211"/> <atom id="LINOLENIC_ACID-atom18" elementType="C" x2="0.70957" y2="-0.50165"/> <atom id="LINOLENIC_ACID-atom19" elementType="C" x2="0.9967" y2="-0.35314"/> <atom id="LINOLENIC_ACID-atom20" elementType="C" x2="-0.72607" y2="-0.9901"/> <bond id="LINOLENIC_ACID-bond1" atomRefs="LINOLENIC_ACID-atom20 LINOLENIC_ACID-atom3" order="1"/> <bond id="LINOLENIC_ACID-bond2" atomRefs="LINOLENIC_ACID-atom19 LINOLENIC_ACID-atom14" order="1"/> <bond id="LINOLENIC_ACID-bond3" atomRefs="LINOLENIC_ACID-atom18 LINOLENIC_ACID-atom19" order="1"/> <bond id="LINOLENIC_ACID-bond4" atomRefs="LINOLENIC_ACID-atom17 LINOLENIC_ACID-atom12" order="1"/> <bond id="LINOLENIC_ACID-bond5" atomRefs="LINOLENIC_ACID-atom16 LIN…

unificationXref24637
type: unificationXref
DB: CapCyc
ID: LINOLENIC_ACID

unificationXref24636
type: unificationXref
DB: CAS
ID: 463-40-1

phys-ent-participant22651
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22648
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22648
type: smallMolecule
MOLECULAR-WEIGHT: 310.433
NAME: 13(S)-hydroperoxylinolenate
STRUCTURE: chemicalStructure22650
SYNONYMS: 13(S)-hydroperoxylinolenic acid
SYNONYMS: hydroperoxylinolenic acid
SYNONYMS: 13S-hydroperoxy-9(Z),11(E),15(Z)-octadecatrienoic acid
XREF: unificationXref22649

chemicalStructure22650
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-725-atom1" elementType="C" x2="-0.75" y2="-0.05921054"/> <atom id="CPD-725-atom2" elementType="C" x2="0.15460527" y2="-0.6611842"/> <atom id="CPD-725-atom3" elementType="C" x2="-1.0" y2="-0.25328946"/> <atom id="CPD-725-atom4" elementType="C" x2="-0.5361842" y2="-0.49013156"/> <atom id="CPD-725-atom5" elementType="O" x2="-0.29276317" y2="-0.8815789"/> <atom id="CPD-725-atom6" elementType="C" x2="-0.5263158" y2="-0.2368421"/> <atom id="CPD-725-atom7" elementType="C" x2="-1.0" y2="-0.49671054"/> <atom id="CPD-725-atom8" elementType="O" x2="-0.07236844" y2="-1.0"/> <atom id="CPD-725-atom9" elementType="O" x2="0.9802631" y2="-0.049342096"/> <atom id="CPD-725-atom10" elementType="O" x2="0.99671054" y2="-0.4605263"/> <atom id="CPD-725-atom11" elementType="C" x2="0.625" y2="-0.50328946"/> <atom id="CPD-725-atom12" elementType="C" x2="0.17763162" y2="-0.02960527"/> <atom id="CPD-725-atom13" elementType="C" x2="0.60197365" y2="-0.042763174"/> <atom id="CPD-725-atom14" elementType="C" x2="-0.055921018" y2="-0.21381581"/> <atom id="CPD-725-atom15" elementType="C" x2="0.81578946" y2="-0.70394737"/> <atom id="CPD-725-atom16" elementType="C" x2="0.39802635" y2="-0.22039473"/> <atom id="CPD-725-atom17" elementType="C" x2="-0.0625" y2="-0.5"/> <atom id="CPD-725-atom18" elementType="C" x2="0.4111842" y2="-0.6611842"/> <atom id="CPD-725-atom19" elementType="C" x2="-0.29276317" y2="-0.65789473"/> <atom id="CPD-725-atom20" elementType="C" x2="-0.27960527" y2="-0.039473653"/> <atom id="CPD-725-atom21" elementType="C" x2="-0.7631579" y2="-0.65460527"/> <atom id="CPD-725-atom22" elementType="C" x2="0.8026316" y2="-0.2631579"/> <bond id="CPD-725-bond1" atomRefs="CPD-725-atom21 CPD-725-atom7" order="1"/> <bond id="CPD-725-bond2" atomRefs="CPD-725-atom20 CPD-725-atom14" order="1"/> <bond id="CPD-725-bond3" atomRefs="CPD-725-atom19 CPD-725-atom5" order="1"/> <bond id="CPD-725-bond4" atomRefs="CPD-725-atom19 CPD-725-atom4" order="1"/> <bond id="CPD-725-bond5" atomRefs="CPD-725-at…

unificationXref22649
type: unificationXref
DB: CapCyc
ID: CPD-725

unificationXref28396
type: unificationXref
DB: CapCyc
ID: RXN-1321

unificationXref28443
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-7

catalysis28437
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28441
NAME: lipoxygenase
XREF: unificationXref28438

unificationXref28438
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-44

catalysis28432
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28436
NAME: LIPOXYGENASE
XREF: unificationXref28433

unificationXref28433
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-139

catalysis28427
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28431
NAME: LIPOXYGENASE
XREF: unificationXref28428

unificationXref28428
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-299

catalysis28422
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28426
NAME: LIPOXYGENASE
XREF: unificationXref28423

unificationXref28423
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-324

catalysis28417
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28421
NAME: lipoxygenase
XREF: unificationXref28418

unificationXref28418
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-334

catalysis28412
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28416
NAME: LIPOXYGENASE
XREF: unificationXref28413

unificationXref28413
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-498

catalysis28407
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28411
NAME: lipoxygenase
XREF: unificationXref28408

unificationXref28408
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-562

catalysis28402
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28406
NAME: LIPOXYGENASE
XREF: unificationXref28403

unificationXref28403
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-620

catalysis28397
type: catalysis
CONTROLLED: biochemicalReaction28395
CONTROLLER: phys-ent-participant28401
NAME: LIPOXYGENASE
XREF: unificationXref28398

unificationXref28398
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-651

catalysis28369
type: catalysis
CONTROLLED: biochemicalReaction28362
CONTROLLER: phys-ent-participant28373
NAME: FLAVANONE 3-HYDROXYLASE
XREF: unificationXref28370

biochemicalReaction28362
type: biochemicalReaction
EC-NUMBER: 1.14.11.9
LEFT: phys-ent-participant21707
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: Naringenin 3-dioxygenase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21430
RIGHT: phys-ent-participant28129
SYNONYMS: Flavanone synthase I
SYNONYMS: Flavonone 3-hydroxylase
SYNONYMS: Naringenin,2-oxoglutarate 3-dioxygenase
XREF: unificationXref28363

phys-ent-participant21707
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21703
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21703
type: smallMolecule
MOLECULAR-WEIGHT: 272.257
NAME: naringenin
STRUCTURE: chemicalStructure21706
SYNONYMS: pelargidanon
SYNONYMS: salipurpol
SYNONYMS: naringetol
SYNONYMS: 4;,5',7-trihydroxyflavanone
SYNONYMS: 4',5,7-Trihydroxyflavanone
SYNONYMS: flavanone naringenin
XREF: unificationXref21705
XREF: unificationXref21704

chemicalStructure21706
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NARINGENIN-CMPD-atom1" elementType="H" x2="6.0622" y2="-4.9"/> <atom id="NARINGENIN-CMPD-atom2" elementType="O" x2="4.8497" y2="0.0"/> <atom id="NARINGENIN-CMPD-atom3" elementType="O" x2="10.9119" y2="-6.3"/> <atom id="NARINGENIN-CMPD-atom4" elementType="O" x2="0.0" y2="-4.2"/> <atom id="NARINGENIN-CMPD-atom5" elementType="O" x2="2.4249" y2="0.0"/> <atom id="NARINGENIN-CMPD-atom6" elementType="C" x2="9.6995" y2="-4.2"/> <atom id="NARINGENIN-CMPD-atom7" elementType="C" x2="8.487" y2="-6.3"/> <atom id="NARINGENIN-CMPD-atom8" elementType="C" x2="8.487" y2="-3.5"/> <atom id="NARINGENIN-CMPD-atom9" elementType="C" x2="7.2746" y2="-5.6"/> <atom id="NARINGENIN-CMPD-atom10" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="NARINGENIN-CMPD-atom11" elementType="C" x2="2.4249" y2="-4.2"/> <atom id="NARINGENIN-CMPD-atom12" elementType="C" x2="6.0622" y2="-2.1"/> <atom id="NARINGENIN-CMPD-atom13" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="NARINGENIN-CMPD-atom14" elementType="C" x2="4.8497" y2="-1.4"/> <atom id="NARINGENIN-CMPD-atom15" elementType="C" x2="9.6995" y2="-5.6"/> <atom id="NARINGENIN-CMPD-atom16" elementType="C" x2="1.2124" y2="-3.5"/> <atom id="NARINGENIN-CMPD-atom17" elementType="C" x2="2.4249" y2="-1.4"/> <atom id="NARINGENIN-CMPD-atom18" elementType="C" x2="7.2746" y2="-4.2"/> <atom id="NARINGENIN-CMPD-atom19" elementType="C" x2="3.6373" y2="-3.5"/> <atom id="NARINGENIN-CMPD-atom20" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="NARINGENIN-CMPD-atom21" elementType="C" x2="6.0622" y2="-3.5"/> <bond id="NARINGENIN-CMPD-bond1" atomRefs="NARINGENIN-CMPD-atom19 NARINGENIN-CMPD-atom20" order="A"/> <bond id="NARINGENIN-CMPD-bond2" atomRefs="NARINGENIN-CMPD-atom18 NARINGENIN-CMPD-atom21" order="1"/> <bond id="NARINGENIN-CMPD-bond3" atomRefs="NARINGENIN-CMPD-atom20 NARINGENIN-CMPD-atom17" order="A"/> <bond id="NARINGENIN-CMPD-bond4" atomRefs="NARINGENIN-CMPD-atom14 NARINGENIN-CMPD-atom20" order="1"/> <bond id="NARINGENIN-CMPD-bond5" atomRefs="NARINGENIN…

unificationXref21705
type: unificationXref
DB: CapCyc
ID: NARINGENIN-CMPD

unificationXref21704
type: unificationXref
DB: CAS
ID: 480-41-1

phys-ent-participant21430
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21424
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21424
type: smallMolecule
MOLECULAR-WEIGHT: 118.089
NAME: succinate
STRUCTURE: chemicalStructure21429
SYNONYMS: succinic acid
SYNONYMS: suc
SYNONYMS: succ
SYNONYMS: butanedioic acid
SYNONYMS: ethylenesuccinic acid
XREF: unificationXref21428
XREF: unificationXref21427
XREF: unificationXref21426
XREF: unificationXref21425

chemicalStructure21429
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SUC-atom1" elementType="O" x2="2.8552" y2="-2.059"/> <atom id="SUC-atom2" elementType="O" x2="0.7199" y2="0.0"/> <atom id="SUC-atom3" elementType="O" x2="3.5796" y2="-0.8337"/> <atom id="SUC-atom4" elementType="O" x2="0.0" y2="-1.232"/> <atom id="SUC-atom5" elementType="C" x2="2.1453" y2="-0.8269"/> <atom id="SUC-atom6" elementType="C" x2="1.4287" y2="-1.2377"/> <atom id="SUC-atom7" elementType="C" x2="2.8586" y2="-1.2376"/> <atom id="SUC-atom8" elementType="C" x2="0.7165" y2="-0.8213"/> <bond id="SUC-bond1" atomRefs="SUC-atom1 SUC-atom7" order="2"/> <bond id="SUC-bond2" atomRefs="SUC-atom2 SUC-atom8" order="2"/> <bond id="SUC-bond3" atomRefs="SUC-atom3 SUC-atom7" order="1"/> <bond id="SUC-bond4" atomRefs="SUC-atom4 SUC-atom8" order="1"/> <bond id="SUC-bond5" atomRefs="SUC-atom5 SUC-atom6" order="1"/> <bond id="SUC-bond6" atomRefs="SUC-atom5 SUC-atom7" order="1"/> <bond id="SUC-bond7" atomRefs="SUC-atom6 SUC-atom8" order="1"/> <formula concise="C 4 H 6 O 4" formalCharge="0"/> 118.089 C(O)(=O)CCC(=O)O

unificationXref21428
type: unificationXref
DB: CapCyc
ID: SUC

unificationXref21427
type: unificationXref
DB: CAS
ID: 110-15-6

unificationXref21426
type: unificationXref
DB: CAS
ID: 110-15-6

unificationXref21425
type: unificationXref
DB: LIGAND
ID: C00042

unificationXref28363
type: unificationXref
DB: CapCyc
ID: NARINGENIN-3-DIOXYGENASE-RXN

phys-ent-participant28373
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28371
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28371
type: protein
NAME: FLAVANONE 3-HYDROXYLASE
ORGANISM: bioSource20982
XREF: unificationXref28372

unificationXref28372
type: unificationXref
DB: CapCyc
ID: SGNU196299-MONOMER

unificationXref28370
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-35

catalysis28364
type: catalysis
CONTROLLED: biochemicalReaction28362
CONTROLLER: phys-ent-participant28368
NAME: FLAVANONE 3-HYDROXYLASE
XREF: unificationXref28365

phys-ent-participant28368
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28366
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28366
type: protein
NAME: FLAVANONE 3-HYDROXYLASE
ORGANISM: bioSource20982
XREF: unificationXref28367

unificationXref28367
type: unificationXref
DB: CapCyc
ID: SGNU196386-MONOMER

unificationXref28365
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-52

catalysis28328
type: catalysis
CONTROLLED: biochemicalReaction28326
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28329

biochemicalReaction28326
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28307
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN-7589
RIGHT: phys-ent-participant28323
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21430
XREF: unificationXref28327

phys-ent-participant28307
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28304
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28304
type: smallMolecule
MOLECULAR-WEIGHT: 348.438
NAME: GA14
STRUCTURE: chemicalStructure28306
SYNONYMS: gibberellin A14
SYNONYMS: GA14
XREF: unificationXref28305

chemicalStructure28306
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-6228-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD-6228-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD-6228-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD-6228-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD-6228-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD-6228-atom6" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD-6228-atom7" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD-6228-atom8" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD-6228-atom9" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD-6228-atom10" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD-6228-atom11" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD-6228-atom12" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD-6228-atom13" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD-6228-atom14" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD-6228-atom15" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD-6228-atom16" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD-6228-atom17" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD-6228-atom18" elementType="O" x2="-3.5311" y2="1.254"/> <atom id="CPD-6228-atom19" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD-6228-atom20" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD-6228-atom21" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD-6228-atom22" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD-6228-atom23" elementType="O" x2="-4.9602" y2="-0.175"/> <atom id="CPD-6228-atom24" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD-6228-atom25" elementType="O" x2="-2.2937" y2="0.5393"/> <atom id="CPD-6228-atom26" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD-6228-atom27" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD-6228-bond1" atomRefs="CPD-6228-atom26 CPD-6228-atom27" order="2"/> <bond id="CPD-6228-bond2" atomR…

unificationXref28305
type: unificationXref
DB: CapCyc
ID: CPD-6228

phys-ent-participant28323
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28320
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28320
type: smallMolecule
MOLECULAR-WEIGHT: 364.438
NAME: GA37
STRUCTURE: chemicalStructure28322
SYNONYMS: gibberellin A37
SYNONYMS: GA37
XREF: unificationXref28321

chemicalStructure28322
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref28321
type: unificationXref
DB: CapCyc
ID: CPD-6202

unificationXref28327
type: unificationXref
DB: CapCyc
ID: RXN-7589

phys-ent-participant28215
type: physicalEntityParticipant
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CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28213
type: protein
NAME: GIBBERELLIN 20-OXIDASE
ORGANISM: bioSource20982
XREF: unificationXref28214

unificationXref28214
type: unificationXref
DB: CapCyc
ID: SGNU201257-MONOMER

unificationXref28329
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-478

catalysis28324
type: catalysis
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NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28325

biochemicalReaction28318
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
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LEFT: phys-ent-participant25706
LEFT: phys-ent-participant23342
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XREF: unificationXref28319

phys-ent-participant28315
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28312
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28312
type: smallMolecule
MOLECULAR-WEIGHT: 362.422
NAME: GA36
STRUCTURE: chemicalStructure28314
SYNONYMS: gibberellin A36
SYNONYMS: GA36
XREF: unificationXref28313

chemicalStructure28314
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-6201-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD-6201-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD-6201-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD-6201-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD-6201-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD-6201-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD-6201-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD-6201-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD-6201-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD-6201-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD-6201-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD-6201-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD-6201-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD-6201-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD-6201-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD-6201-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD-6201-atom17" elementType="O" x2="-3.5311" y2="1.254"/> <atom id="CPD-6201-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD-6201-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD-6201-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD-6201-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD-6201-atom22" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD-6201-atom23" elementType="O" x2="-3.5313" y2="-2.65"/> <atom id="CPD-6201-atom24" elementType="O" x2="-4.9602" y2="-0.175"/> <atom id="CPD-6201-atom25" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD-6201-atom26" elementType="O" x2="-2.2937" y2="0.5393"/> <atom id="CPD-6201-atom27" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD-6201-atom28" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD-6201-bond1" atomRefs="CPD-620…

unificationXref28313
type: unificationXref
DB: CapCyc
ID: CPD-6201

unificationXref28319
type: unificationXref
DB: CapCyc
ID: RXN-7590

unificationXref28325
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-479

catalysis28316
type: catalysis
CONTROLLED: biochemicalReaction28310
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28317

biochemicalReaction28310
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
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LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
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RIGHT: phys-ent-participant27413
XREF: unificationXref28311

phys-ent-participant27430
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27427
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27427
type: smallMolecule
MOLECULAR-WEIGHT: 332.396
NAME: GA4
STRUCTURE: chemicalStructure27429
SYNONYMS: gibberellin A4
SYNONYMS: GA4
XREF: unificationXref27428

chemicalStructure27429
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-137-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-137-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-137-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-137-atom4" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-137-atom5" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-137-atom6" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-137-atom7" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-137-atom8" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-137-atom9" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-137-atom10" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-137-atom11" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-137-atom12" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-137-atom13" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-137-atom14" elementType="C" x2="-3.5313" y2="0.65"/> <atom id="CPD1F-137-atom15" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-137-atom16" elementType="O" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-137-atom17" elementType="O" x2="-3.945" y2="-1.4871"/> <atom id="CPD1F-137-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-137-atom19" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-137-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-137-atom21" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-137-atom22" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-137-atom23" elementType="C" x2="-3.5678" y2="-0.8469"/> <atom id="CPD1F-137-atom24" elementType="O" x2="-4.9602" y2="-0.175"/> <atom id="CPD1F-137-atom25" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-137-atom26" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-137-bond1" atomRefs="CPD1F-137-atom20 CPD1F-137-atom25" order="1"/> <bond id="CPD1F-137-bond2" atomRefs="CPD1F-137-atom25 CPD1F-137-atom26" …

unificationXref27428
type: unificationXref
DB: CapCyc
ID: CPD1F-137

phys-ent-participant27413
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21158
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref28311
type: unificationXref
DB: CapCyc
ID: RXN-7591

unificationXref28317
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-480

catalysis28308
type: catalysis
CONTROLLED: biochemicalReaction28302
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28309

biochemicalReaction28302
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28307
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant26753
NAME: RXN-7619
RIGHT: phys-ent-participant27430
RIGHT: phys-ent-participant26766
RIGHT: phys-ent-participant21166
XREF: unificationXref28303

unificationXref28303
type: unificationXref
DB: CapCyc
ID: RXN-7619

unificationXref28309
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-481

catalysis28292
type: catalysis
CONTROLLED: biochemicalReaction28290
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28293

biochemicalReaction28290
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28069
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant26753
NAME: RXN-7624
RIGHT: phys-ent-participant27420
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant26766
XREF: unificationXref28291

phys-ent-participant28069
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28066
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28066
type: smallMolecule
MOLECULAR-WEIGHT: 332.439
NAME: GA12
STRUCTURE: chemicalStructure28068
SYNONYMS: gibberellin A12
SYNONYMS: GA12
XREF: unificationXref28067

chemicalStructure28068
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-95-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-95-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-95-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-95-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-95-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD1F-95-atom6" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-95-atom7" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-95-atom8" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-95-atom9" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-95-atom10" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-95-atom11" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-95-atom12" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-95-atom13" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-95-atom14" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-95-atom15" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-95-atom16" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-95-atom17" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-95-atom18" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD1F-95-atom19" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-95-atom20" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-95-atom21" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-95-atom22" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-95-atom23" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD1F-95-atom24" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD1F-95-atom25" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-95-atom26" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-95-bond1" atomRefs="CPD1F-95-atom21 CPD1F-95-atom25" order="1"/> <bond id="CPD1F-95-bond2" atomRefs="CPD1F-95-atom25 CPD1F-95-atom26" order="2"/> <bond id="CPD1F-95-…

unificationXref28067
type: unificationXref
DB: CapCyc
ID: CPD1F-95

phys-ent-participant27420
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27417
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27417
type: smallMolecule
MOLECULAR-WEIGHT: 316.396
NAME: GA9
STRUCTURE: chemicalStructure27419
SYNONYMS: gibberellin A9
SYNONYMS: GA9
XREF: unificationXref27418

chemicalStructure27419
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-134-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-134-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-134-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-134-atom4" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-134-atom5" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-134-atom6" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-134-atom7" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-134-atom8" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-134-atom9" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-134-atom10" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-134-atom11" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-134-atom12" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-134-atom13" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-134-atom14" elementType="C" x2="-3.5313" y2="0.65"/> <atom id="CPD1F-134-atom15" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-134-atom16" elementType="O" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-134-atom17" elementType="O" x2="-3.945" y2="-1.4871"/> <atom id="CPD1F-134-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-134-atom19" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-134-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-134-atom21" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-134-atom22" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-134-atom23" elementType="C" x2="-3.5678" y2="-0.8469"/> <atom id="CPD1F-134-atom24" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-134-atom25" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-134-bond1" atomRefs="CPD1F-134-atom20 CPD1F-134-atom24" order="1"/> <bond id="CPD1F-134-bond2" atomRefs="CPD1F-134-atom24 CPD1F-134-atom25" order="2"/> <bond id="CPD1F-134-bond3" atomRefs="CPD1F-134-atom13 CPD1F…

unificationXref27418
type: unificationXref
DB: CapCyc
ID: CPD1F-134

unificationXref28291
type: unificationXref
DB: CapCyc
ID: RXN-7624

unificationXref28293
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-482

catalysis28276
type: catalysis
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CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28277

biochemicalReaction28270
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
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LEFT: phys-ent-participant25706
NAME: RXN1F-101
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RIGHT: phys-ent-participant21430
RIGHT: phys-ent-participant21166
XREF: unificationXref28271

phys-ent-participant28231
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28228
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28228
type: smallMolecule
MOLECULAR-WEIGHT: 362.422
NAME: GA19
STRUCTURE: chemicalStructure28230
SYNONYMS: gibberellin A19
SYNONYMS: GA19
XREF: unificationXref28229

chemicalStructure28230
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref28229
type: unificationXref
DB: CapCyc
ID: CPD1F-96

phys-ent-participant28275
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28272
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28272
type: smallMolecule
COMMENT: Inactive GA (all GA's that carry a carboxyl group at C20 are biologically inactive)
MOLECULAR-WEIGHT: 378.421
NAME: GA17
STRUCTURE: chemicalStructure28274
SYNONYMS: gibberellin A17
SYNONYMS: GA17
XREF: unificationXref28273

chemicalStructure28274
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-86-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-86-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-86-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-86-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-86-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD1F-86-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-86-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-86-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-86-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-86-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-86-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-86-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-86-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-86-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-86-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-86-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-86-atom17" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD1F-86-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-86-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-86-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-86-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-86-atom22" elementType="O" x2="0.2762" y2="-2.3249"/> <atom id="CPD1F-86-atom23" elementType="O" x2="-2.1023" y2="-2.65"/> <atom id="CPD1F-86-atom24" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD1F-86-atom25" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD1F-86-atom26" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-86-atom27" elementType="O" x2="-0.9702" y2="0.6235"/> <atom id="CPD1F-86-atom28" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-86-atom29" elementType="O"…

unificationXref28273
type: unificationXref
DB: CapCyc
ID: CPD1F-86

unificationXref28271
type: unificationXref
DB: CapCyc
ID: RXN1F-101

unificationXref28277
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-483

catalysis28268
type: catalysis
CONTROLLED: biochemicalReaction28266
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28269

biochemicalReaction28266
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28069
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN1F-162
RIGHT: phys-ent-participant28263
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21430
XREF: unificationXref28267

phys-ent-participant28263
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28260
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28260
type: smallMolecule
MOLECULAR-WEIGHT: 348.438
NAME: GA15
STRUCTURE: chemicalStructure28262
SYNONYMS: gibberellin A15
SYNONYMS: GA15 (open lactone form)
SYNONYMS: gibberellin A15 (open lactone form)
XREF: unificationXref28261

chemicalStructure28262
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-97-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-97-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-97-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-97-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-97-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD1F-97-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-97-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-97-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-97-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-97-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-97-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-97-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-97-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-97-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-97-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-97-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-97-atom17" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD1F-97-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-97-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-97-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-97-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-97-atom22" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-97-atom23" elementType="O" x2="-3.5313" y2="-2.65"/> <atom id="CPD1F-97-atom24" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD1F-97-atom25" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD1F-97-atom26" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-97-atom27" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-97-bond1" atomRefs="CPD1F-97-atom20 CPD1F-97-atom26" order="1"/> <bond id="CPD1F-97-bond2" atomR…

unificationXref28261
type: unificationXref
DB: CapCyc
ID: CPD1F-97

unificationXref28267
type: unificationXref
DB: CapCyc
ID: RXN1F-162

unificationXref28269
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-484

catalysis28264
type: catalysis
CONTROLLED: biochemicalReaction28258
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28265

biochemicalReaction28258
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28263
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant23342
NAME: RXN1F-163
RIGHT: phys-ent-participant28206
RIGHT: phys-ent-participant21430
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant20951
XREF: unificationXref28259

phys-ent-participant28206
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28203
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28203
type: smallMolecule
MOLECULAR-WEIGHT: 346.422
NAME: GA24
STRUCTURE: chemicalStructure28205
SYNONYMS: gibberellin A24
SYNONYMS: GA24
XREF: unificationXref28204

chemicalStructure28205
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-120-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-120-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-120-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-120-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-120-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD1F-120-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-120-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-120-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-120-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-120-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-120-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-120-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-120-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-120-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-120-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-120-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-120-atom17" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD1F-120-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-120-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-120-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-120-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-120-atom22" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-120-atom23" elementType="O" x2="-3.5313" y2="-2.65"/> <atom id="CPD1F-120-atom24" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD1F-120-atom25" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD1F-120-atom26" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-120-atom27" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-120-bond1" atomRefs="CPD1F-120-atom20 CPD1F-120-atom26" order="1"/> <…

unificationXref28204
type: unificationXref
DB: CapCyc
ID: CPD1F-120

unificationXref28259
type: unificationXref
DB: CapCyc
ID: RXN1F-163

unificationXref28265
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-485

catalysis28256
type: catalysis
CONTROLLED: biochemicalReaction28254
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28257

biochemicalReaction28254
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28206
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN1F-164
RIGHT: phys-ent-participant27420
RIGHT: phys-ent-participant27413
RIGHT: phys-ent-participant21430
XREF: unificationXref28255

unificationXref28255
type: unificationXref
DB: CapCyc
ID: RXN1F-164

unificationXref28257
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-486

catalysis28248
type: catalysis
CONTROLLED: biochemicalReaction28242
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28249

biochemicalReaction28242
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28247
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN1F-167
RIGHT: phys-ent-participant28239
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21430
XREF: unificationXref28243

phys-ent-participant28247
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28244
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28244
type: smallMolecule
MOLECULAR-WEIGHT: 348.438
NAME: GA53
STRUCTURE: chemicalStructure28246
SYNONYMS: gibberellin A53
SYNONYMS: GA53
XREF: unificationXref28245

chemicalStructure28246
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-695-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD-695-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD-695-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD-695-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD-695-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD-695-atom6" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD-695-atom7" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD-695-atom8" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD-695-atom9" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD-695-atom10" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD-695-atom11" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD-695-atom12" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD-695-atom13" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD-695-atom14" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD-695-atom15" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD-695-atom16" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD-695-atom17" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD-695-atom18" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD-695-atom19" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD-695-atom20" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD-695-atom21" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD-695-atom22" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD-695-atom23" elementType="O" x2="0.2762" y2="-2.3249"/> <atom id="CPD-695-atom24" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD-695-atom25" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD-695-atom26" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD-695-atom27" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD-695-bond1" atomRefs="CPD-695-atom21 CPD-695-atom26" order="1"/> <bond id="CPD-695-bond2" atomRefs="CPD-695-atom26 CPD-695-at…

unificationXref28245
type: unificationXref
DB: CapCyc
ID: CPD-695

phys-ent-participant28239
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28236
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28236
type: smallMolecule
MOLECULAR-WEIGHT: 364.438
NAME: GA44
STRUCTURE: chemicalStructure28238
SYNONYMS: gibberellin A44
SYNONYMS: GA44
SYNONYMS: GA44 open lactone form
SYNONYMS: gibberellin A44 open lactone form
SYNONYMS: GA44 free alcohol form
SYNONYMS: gibberellin A44 free alcohol form
XREF: unificationXref28237

chemicalStructure28238
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-638-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD-638-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD-638-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD-638-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD-638-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD-638-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD-638-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD-638-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD-638-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD-638-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD-638-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD-638-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD-638-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD-638-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD-638-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD-638-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD-638-atom17" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD-638-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD-638-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD-638-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD-638-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD-638-atom22" elementType="O" x2="0.2762" y2="-2.3249"/> <atom id="CPD-638-atom23" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD-638-atom24" elementType="O" x2="-3.5313" y2="-2.65"/> <atom id="CPD-638-atom25" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD-638-atom26" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD-638-atom27" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD-638-atom28" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD-638-bond1" atomRefs="CPD-638-atom20 CPD-638-atom27" orde…

unificationXref28237
type: unificationXref
DB: CapCyc
ID: CPD-638

unificationXref28243
type: unificationXref
DB: CapCyc
ID: RXN1F-167

unificationXref28249
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-487

catalysis28240
type: catalysis
CONTROLLED: biochemicalReaction28234
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28241

biochemicalReaction28234
type: biochemicalReaction
EC-NUMBER: 1.14.11.12
LEFT: phys-ent-participant28239
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant23342
NAME: RXN1F-168
RIGHT: phys-ent-participant28231
RIGHT: phys-ent-participant21430
RIGHT: phys-ent-participant21166
XREF: unificationXref28235

unificationXref28235
type: unificationXref
DB: CapCyc
ID: RXN1F-168

unificationXref28241
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-488

catalysis28232
type: catalysis
CONTROLLED: biochemicalReaction28226
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28233

biochemicalReaction28226
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28231
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN1F-169
RIGHT: phys-ent-participant28221
RIGHT: phys-ent-participant27413
RIGHT: phys-ent-participant21430
XREF: unificationXref28227

phys-ent-participant28221
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28218
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28218
type: smallMolecule
MOLECULAR-WEIGHT: 332.396
NAME: GA20
STRUCTURE: chemicalStructure28220
SYNONYMS: gibberellin A20
SYNONYMS: GA20
XREF: unificationXref28219

chemicalStructure28220
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-140-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-140-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-140-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-140-atom4" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-140-atom5" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-140-atom6" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-140-atom7" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-140-atom8" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-140-atom9" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-140-atom10" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-140-atom11" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-140-atom12" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-140-atom13" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-140-atom14" elementType="O" x2="0.2762" y2="-2.3249"/> <atom id="CPD1F-140-atom15" elementType="C" x2="-3.5313" y2="0.65"/> <atom id="CPD1F-140-atom16" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-140-atom17" elementType="O" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-140-atom18" elementType="O" x2="-3.945" y2="-1.4871"/> <atom id="CPD1F-140-atom19" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-140-atom20" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-140-atom21" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-140-atom22" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-140-atom23" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-140-atom24" elementType="C" x2="-3.5678" y2="-0.8469"/> <atom id="CPD1F-140-atom25" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-140-atom26" elementType="O" x2="-0.9702" y2="0.6235"/> <bond id="CPD1F-140-bond1" atomRefs="CPD1F-140-atom21 CPD1F-140-atom25" order="1"/> <bond id="CPD1F-140-bond2" atomRefs="CPD1F-140-atom25 CPD1F-140-atom26" …

unificationXref28219
type: unificationXref
DB: CapCyc
ID: CPD1F-140

unificationXref28227
type: unificationXref
DB: CapCyc
ID: RXN1F-169

unificationXref28233
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-489

catalysis28211
type: catalysis
CONTROLLED: biochemicalReaction28201
CONTROLLER: phys-ent-participant28215
NAME: GIBBERELLIN 20-OXIDASE
XREF: unificationXref28212

biochemicalReaction28201
type: biochemicalReaction
EC-NUMBER: 1.14.11.-
LEFT: phys-ent-participant28206
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25706
NAME: RXN1F-99
RIGHT: phys-ent-participant28210
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21430
XREF: unificationXref28202

phys-ent-participant28210
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule28207
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule28207
type: smallMolecule
COMMENT: Inactive GA. (All GAs that have a carboxyl group on C-20 are not biologically active).
MOLECULAR-WEIGHT: 362.422
NAME: GA25
STRUCTURE: chemicalStructure28209
SYNONYMS: gibberellin A25
SYNONYMS: GA25
XREF: unificationXref28208

chemicalStructure28209
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-84-atom1" elementType="C" x2="-3.5313" y2="-1.825"/> <atom id="CPD1F-84-atom2" elementType="C" x2="-4.2457" y2="-1.4125"/> <atom id="CPD1F-84-atom3" elementType="C" x2="-4.2457" y2="-0.5875"/> <atom id="CPD1F-84-atom4" elementType="C" x2="-3.5313" y2="-0.175"/> <atom id="CPD1F-84-atom5" elementType="C" x2="-4.2457" y2="0.2375"/> <atom id="CPD1F-84-atom6" elementType="H" x2="-2.8168" y2="0.2375"/> <atom id="CPD1F-84-atom7" elementType="H" x2="-2.3677" y2="-0.9138"/> <atom id="CPD1F-84-atom8" elementType="C" x2="-2.0322" y2="-1.6675"/> <atom id="CPD1F-84-atom9" elementType="C" x2="-0.8762" y2="-2.5074"/> <atom id="CPD1F-84-atom10" elementType="C" x2="-1.6966" y2="-2.4211"/> <atom id="CPD1F-84-atom11" elementType="C" x2="-0.7268" y2="-1.0863"/> <atom id="CPD1F-84-atom12" elementType="C" x2="-0.3913" y2="-1.84"/> <atom id="CPD1F-84-atom13" elementType="C" x2="0.0937" y2="-1.1725"/> <atom id="CPD1F-84-atom14" elementType="C" x2="-1.5473" y2="-1.0"/> <atom id="CPD1F-84-atom15" elementType="C" x2="-1.0623" y2="-0.3326"/> <atom id="CPD1F-84-atom16" elementType="C" x2="0.9086" y2="-1.0436"/> <atom id="CPD1F-84-atom17" elementType="O" x2="-3.5312" y2="1.2539"/> <atom id="CPD1F-84-atom18" elementType="C" x2="-2.8168" y2="-1.4125"/> <atom id="CPD1F-84-atom19" elementType="C" x2="-2.8168" y2="-0.5875"/> <atom id="CPD1F-84-atom20" elementType="C" x2="-2.0322" y2="-0.3326"/> <atom id="CPD1F-84-atom21" elementType="O" x2="-2.3292" y2="1.0651"/> <atom id="CPD1F-84-atom22" elementType="O" x2="-2.1023" y2="-2.65"/> <atom id="CPD1F-84-atom23" elementType="C" x2="-3.1187" y2="0.5394"/> <atom id="CPD1F-84-atom24" elementType="O" x2="-2.2937" y2="0.5394"/> <atom id="CPD1F-84-atom25" elementType="C" x2="-1.7772" y2="0.452"/> <atom id="CPD1F-84-atom26" elementType="O" x2="-0.9702" y2="0.6235"/> <atom id="CPD1F-84-atom27" elementType="C" x2="-2.8168" y2="-2.2375"/> <atom id="CPD1F-84-atom28" elementType="O" x2="-3.5313" y2="-2.65"/> <bond id="CPD1F-84-bond1" atomRefs="CPD1F-8…

unificationXref28208
type: unificationXref
DB: CapCyc
ID: CPD1F-84

unificationXref28202
type: unificationXref
DB: CapCyc
ID: RXN1F-99

unificationXref28212
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-490

catalysis28001
type: catalysis
CONTROLLED: biochemicalReaction27994
CONTROLLER: phys-ent-participant28005
NAME: cinnamate 4-hydroxylase
XREF: unificationXref28002

biochemicalReaction27994
type: biochemicalReaction
EC-NUMBER: 1.14.13.11
LEFT: phys-ent-participant22498
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant26753
NAME: Trans-cinnamate 4-monooxygenase
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant26766
RIGHT: phys-ent-participant21579
SYNONYMS: CA4H
SYNONYMS: Cinnamate 4-monooxygenase
SYNONYMS: Cinnamate 4-hydroxylase
SYNONYMS: Cinnamic acid 4-monooxygenase
SYNONYMS: Cinnamic acid 4-hydroxylase
XREF: unificationXref27995

phys-ent-participant22498
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22492
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22492
type: smallMolecule
MOLECULAR-WEIGHT: 148.161
NAME: trans-cinnamate
STRUCTURE: chemicalStructure22497
SYNONYMS: β-phenylacrylic acid
SYNONYMS: 3-phenyl-2-propenoic acid
SYNONYMS: cinnamic acid
SYNONYMS: cinnamate
SYNONYMS: trans-cinnamic acid
SYNONYMS: (E)-cinnamate
XREF: unificationXref22496
XREF: unificationXref22495
XREF: unificationXref22494
XREF: unificationXref22493

chemicalStructure22497
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-674-atom1" elementType="C" x2="-1.3707" y2="-0.2563"/> <atom id="CPD-674-atom2" elementType="C" x2="-1.3707" y2="0.5688"/> <atom id="CPD-674-atom3" elementType="C" x2="-0.6563" y2="0.9813"/> <atom id="CPD-674-atom4" elementType="C" x2="0.0582" y2="0.5688"/> <atom id="CPD-674-atom5" elementType="C" x2="0.0582" y2="-0.2563"/> <atom id="CPD-674-atom6" elementType="C" x2="-0.6563" y2="-0.6688"/> <atom id="CPD-674-atom7" elementType="C" x2="-0.6563" y2="-1.4938"/> <atom id="CPD-674-atom8" elementType="C" x2="0.0582" y2="-1.9063"/> <atom id="CPD-674-atom9" elementType="C" x2="0.0582" y2="-2.7313"/> <atom id="CPD-674-atom10" elementType="O" x2="0.7727" y2="-3.1438"/> <atom id="CPD-674-atom11" elementType="O" x2="-0.6563" y2="-3.1438"/> <bond id="CPD-674-bond1" atomRefs="CPD-674-atom9 CPD-674-atom10" order="2"/> <bond id="CPD-674-bond2" atomRefs="CPD-674-atom9 CPD-674-atom11" order="1"/> <bond id="CPD-674-bond3" atomRefs="CPD-674-atom8 CPD-674-atom9" order="1"/> <bond id="CPD-674-bond4" atomRefs="CPD-674-atom7 CPD-674-atom8" order="2"/> <bond id="CPD-674-bond5" atomRefs="CPD-674-atom6 CPD-674-atom7" order="1"/> <bond id="CPD-674-bond6" atomRefs="CPD-674-atom5 CPD-674-atom4" order="A"/> <bond id="CPD-674-bond7" atomRefs="CPD-674-atom4 CPD-674-atom3" order="A"/> <bond id="CPD-674-bond8" atomRefs="CPD-674-atom3 CPD-674-atom2" order="A"/> <bond id="CPD-674-bond9" atomRefs="CPD-674-atom2 CPD-674-atom1" order="A"/> <bond id="CPD-674-bond10" atomRefs="CPD-674-atom6 CPD-674-atom5" order="A"/> <bond id="CPD-674-bond11" atomRefs="CPD-674-atom1 CPD-674-atom6" order="A"/> <formula concise="C 9 H 8 O 2" formalCharge="0"/> 148.161 C(O)(=O)C=Cc1(ccccc1)

unificationXref22496
type: unificationXref
DB: CapCyc
ID: CPD-674

unificationXref22495
type: unificationXref
DB: CAS
ID: 140-10-3

unificationXref22494
type: unificationXref
DB: PubChem
ID: 444539

unificationXref22493
type: unificationXref
DB: LIGAND
ID: C00423

unificationXref27995
type: unificationXref
DB: CapCyc
ID: TRANS-CINNAMATE-4-MONOOXYGENASE-RXN

phys-ent-participant28005
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein28003
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein28003
type: protein
NAME: cinnamate 4-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref28004

unificationXref28004
type: unificationXref
DB: CapCyc
ID: SGNU196647-MONOMER

unificationXref28002
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-81

catalysis27996
type: catalysis
CONTROLLED: biochemicalReaction27994
CONTROLLER: phys-ent-participant28000
NAME: cinnamate 4-hydroxylase
XREF: unificationXref27997

phys-ent-participant28000
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27998
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27998
type: protein
NAME: cinnamate 4-hydroxylase
ORGANISM: bioSource20982
XREF: unificationXref27999

unificationXref27999
type: unificationXref
DB: CapCyc
ID: SGNU196914-MONOMER

unificationXref27997
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-120

catalysis27964
type: catalysis
CONTROLLED: biochemicalReaction27957
CONTROLLER: phys-ent-participant27870
NAME: ZETA-CAROTENE DESATURASE
XREF: unificationXref27965

biochemicalReaction27957
type: biochemicalReaction
EC-NUMBER: 1.14.99.30
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant27182
LEFT: phys-ent-participant27963
NAME: Carotene 7,8-desaturase
RIGHT: phys-ent-participant22765
RIGHT: phys-ent-participant27179
RIGHT: phys-ent-participant21660
SYNONYMS: ζ-carotene desaturase
XREF: unificationXref27958

phys-ent-participant27963
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27959
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27959
type: smallMolecule
MOLECULAR-WEIGHT: 538.898
NAME: neurosporene
STRUCTURE: chemicalStructure27962
XREF: unificationXref27961
XREF: unificationXref27960

chemicalStructure27962
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NEUROSPORENE-atom1" elementType="C" x2="-2.0619" y2="-0.9885"/> <atom id="NEUROSPORENE-atom2" elementType="C" x2="-1.3387" y2="-2.2209"/> <atom id="NEUROSPORENE-atom3" elementType="C" x2="20.0891" y2="-1.2438"/> <atom id="NEUROSPORENE-atom4" elementType="C" x2="19.3658" y2="-0.0114"/> <atom id="NEUROSPORENE-atom5" elementType="C" x2="7.2348" y2="-2.1601"/> <atom id="NEUROSPORENE-atom6" elementType="C" x2="10.7924" y2="-0.0723"/> <atom id="NEUROSPORENE-atom7" elementType="C" x2="4.377" y2="-2.1803"/> <atom id="NEUROSPORENE-atom8" elementType="C" x2="1.5191" y2="-2.2006"/> <atom id="NEUROSPORENE-atom9" elementType="C" x2="13.6502" y2="-0.052"/> <atom id="NEUROSPORENE-atom10" elementType="C" x2="16.508" y2="-0.0317"/> <atom id="NEUROSPORENE-atom11" elementType="C" x2="8.6578" y2="-1.3249"/> <atom id="NEUROSPORENE-atom12" elementType="C" x2="9.3694" y2="-0.9074"/> <atom id="NEUROSPORENE-atom13" elementType="C" x2="5.8" y2="-1.3452"/> <atom id="NEUROSPORENE-atom14" elementType="C" x2="12.2272" y2="-0.8871"/> <atom id="NEUROSPORENE-atom15" elementType="C" x2="2.9422" y2="-1.3655"/> <atom id="NEUROSPORENE-atom16" elementType="C" x2="7.9404" y2="-0.9175"/> <atom id="NEUROSPORENE-atom17" elementType="C" x2="10.0867" y2="-1.3148"/> <atom id="NEUROSPORENE-atom18" elementType="C" x2="6.5115" y2="-0.9277"/> <atom id="NEUROSPORENE-atom19" elementType="C" x2="5.0826" y2="-0.9378"/> <atom id="NEUROSPORENE-atom20" elementType="C" x2="11.5156" y2="-1.3047"/> <atom id="NEUROSPORENE-atom21" elementType="C" x2="3.6537" y2="-0.9479"/> <atom id="NEUROSPORENE-atom22" elementType="C" x2="2.2248" y2="-0.9581"/> <atom id="NEUROSPORENE-atom23" elementType="C" x2="12.9445" y2="-1.2945"/> <atom id="NEUROSPORENE-atom24" elementType="C" x2="-0.633" y2="-0.9784"/> <atom id="NEUROSPORENE-atom25" elementType="C" x2="18.6602" y2="-1.254"/> <atom id="NEUROSPORENE-atom26" elementType="C" x2="15.8024" y2="-1.2743"/> <atom id="NEUROSPORENE-atom27" elementType="C" x2="0.0844" y2="-1.3858"/> <atom…

unificationXref27961
type: unificationXref
DB: CapCyc
ID: NEUROSPORENE

unificationXref27960
type: unificationXref
DB: PubChem
ID: 164636

phys-ent-participant21660
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21657
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21657
type: smallMolecule
MOLECULAR-WEIGHT: 536.882
NAME: lycopene
STRUCTURE: chemicalStructure21659
XREF: unificationXref21658

chemicalStructure21659
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-114-atom1" elementType="C" x2="-2.0619" y2="-0.9885"/> <atom id="CPD1F-114-atom2" elementType="C" x2="-1.3387" y2="-2.2209"/> <atom id="CPD1F-114-atom3" elementType="C" x2="20.0891" y2="-1.2438"/> <atom id="CPD1F-114-atom4" elementType="C" x2="19.3658" y2="-0.0114"/> <atom id="CPD1F-114-atom5" elementType="C" x2="7.2348" y2="-2.1601"/> <atom id="CPD1F-114-atom6" elementType="C" x2="10.7924" y2="-0.0723"/> <atom id="CPD1F-114-atom7" elementType="C" x2="4.377" y2="-2.1803"/> <atom id="CPD1F-114-atom8" elementType="C" x2="1.5191" y2="-2.2006"/> <atom id="CPD1F-114-atom9" elementType="C" x2="13.6502" y2="-0.052"/> <atom id="CPD1F-114-atom10" elementType="C" x2="16.508" y2="-0.0317"/> <atom id="CPD1F-114-atom11" elementType="C" x2="8.6578" y2="-1.3249"/> <atom id="CPD1F-114-atom12" elementType="C" x2="9.3694" y2="-0.9074"/> <atom id="CPD1F-114-atom13" elementType="C" x2="5.8" y2="-1.3452"/> <atom id="CPD1F-114-atom14" elementType="C" x2="12.2272" y2="-0.8871"/> <atom id="CPD1F-114-atom15" elementType="C" x2="2.9422" y2="-1.3655"/> <atom id="CPD1F-114-atom16" elementType="C" x2="7.9404" y2="-0.9175"/> <atom id="CPD1F-114-atom17" elementType="C" x2="10.0867" y2="-1.3148"/> <atom id="CPD1F-114-atom18" elementType="C" x2="6.5115" y2="-0.9277"/> <atom id="CPD1F-114-atom19" elementType="C" x2="5.0826" y2="-0.9378"/> <atom id="CPD1F-114-atom20" elementType="C" x2="11.5156" y2="-1.3047"/> <atom id="CPD1F-114-atom21" elementType="C" x2="3.6537" y2="-0.9479"/> <atom id="CPD1F-114-atom22" elementType="C" x2="2.2248" y2="-0.9581"/> <atom id="CPD1F-114-atom23" elementType="C" x2="12.9445" y2="-1.2945"/> <atom id="CPD1F-114-atom24" elementType="C" x2="-0.633" y2="-0.9784"/> <atom id="CPD1F-114-atom25" elementType="C" x2="18.6602" y2="-1.254"/> <atom id="CPD1F-114-atom26" elementType="C" x2="15.8024" y2="-1.2743"/> <atom id="CPD1F-114-atom27" elementType="C" x2="0.0844" y2="-1.3858"/> <atom id="CPD1F-114-atom28" elementType="C" x2="17.9428" y2="-0.8466"/> <atom id="CPD1…

unificationXref21658
type: unificationXref
DB: CapCyc
ID: CPD1F-114

unificationXref27958
type: unificationXref
DB: CapCyc
ID: 1.14.99.30-RXN

phys-ent-participant27870
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27868
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27868
type: protein
NAME: ZETA-CAROTENE DESATURASE
ORGANISM: bioSource20982
XREF: unificationXref27869

unificationXref27869
type: unificationXref
DB: CapCyc
ID: SGNU204156-MONOMER

unificationXref27965
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-667

catalysis27933
type: catalysis
CONTROLLED: biochemicalReaction27927
CONTROLLER: phys-ent-participant27908
NAME: omega-6 fatty acid desaturase
XREF: unificationXref27934

biochemicalReaction27927
type: biochemicalReaction
EC-NUMBER: 1.14.99.-
LEFT: phys-ent-participant27932
NAME: RXN-1726
RIGHT: phys-ent-participant27920
XREF: unificationXref27928

phys-ent-participant27932
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27929
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27929
type: smallMolecule
MOLECULAR-WEIGHT: 672.921
NAME: 1-18:1-2-trans-16:1-sn-glycerol-3-phosphate
STRUCTURE: chemicalStructure27931
XREF: unificationXref27930

chemicalStructure27931
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref27930
type: unificationXref
DB: CapCyc
ID: CPD-2184

phys-ent-participant27920
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27917
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27917
type: smallMolecule
MOLECULAR-WEIGHT: 670.905
NAME: 1-18:2-2-trans-16:1-sn-glycerol-3-phosphate
STRUCTURE: chemicalStructure27919
XREF: unificationXref27918

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type: chemicalStructure
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unificationXref27918
type: unificationXref
DB: CapCyc
ID: CPD-2185

unificationXref27928
type: unificationXref
DB: CapCyc
ID: RXN-1726

phys-ent-participant27908
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27906
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27906
type: protein
NAME: omega-6 fatty acid desaturase
ORGANISM: bioSource20982
XREF: unificationXref27907

unificationXref27907
type: unificationXref
DB: CapCyc
ID: SGNU197677-MONOMER

unificationXref27934
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-211

catalysis27925
type: catalysis
CONTROLLED: biochemicalReaction27915
CONTROLLER: phys-ent-participant27897
NAME: omega-3 fatty acid desaturase
XREF: unificationXref27926

biochemicalReaction27915
type: biochemicalReaction
EC-NUMBER: 1.14.99.-
LEFT: phys-ent-participant27920
NAME: RXN-1727
RIGHT: phys-ent-participant27924
XREF: unificationXref27916

phys-ent-participant27924
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27921
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27921
type: smallMolecule
MOLECULAR-WEIGHT: 668.889
NAME: 1-18:3-2-trans-16:1-sn-glycerol-3-phosphate
STRUCTURE: chemicalStructure27923
XREF: unificationXref27922

chemicalStructure27923
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref27922
type: unificationXref
DB: CapCyc
ID: CPD-2186

unificationXref27916
type: unificationXref
DB: CapCyc
ID: RXN-1727

phys-ent-participant27897
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27895
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27895
type: protein
NAME: omega-3 fatty acid desaturase
ORGANISM: bioSource20982
XREF: unificationXref27896

unificationXref27896
type: unificationXref
DB: CapCyc
ID: SGNU199466-MONOMER

unificationXref27926
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-351

catalysis27904
type: catalysis
CONTROLLED: biochemicalReaction27898
CONTROLLER: phys-ent-participant27908
NAME: omega-6 fatty acid desaturase
XREF: unificationXref27905

biochemicalReaction27898
type: biochemicalReaction
EC-NUMBER: 1.14.99.-
LEFT: phys-ent-participant27903
NAME: RXN-1729
RIGHT: phys-ent-participant27888
XREF: unificationXref27899

phys-ent-participant27903
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27900
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27900
type: smallMolecule
MOLECULAR-WEIGHT: 755.083
NAME: 1-18:1-2-16:1-monogalactosyldiacylglycerol
STRUCTURE: chemicalStructure27902
XREF: unificationXref27901

chemicalStructure27902
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref27901
type: unificationXref
DB: CapCyc
ID: CPD-2188

phys-ent-participant27888
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27885
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27885
type: smallMolecule
MOLECULAR-WEIGHT: 751.052
NAME: 1-18:2-2-16:2-monogalactosyldiacylglycerol
STRUCTURE: chemicalStructure27887
XREF: unificationXref27886

chemicalStructure27887
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref27886
type: unificationXref
DB: CapCyc
ID: CPD-2189

unificationXref27899
type: unificationXref
DB: CapCyc
ID: RXN-1729

unificationXref27905
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-212

catalysis27893
type: catalysis
CONTROLLED: biochemicalReaction27883
CONTROLLER: phys-ent-participant27897
NAME: omega-3 fatty acid desaturase
XREF: unificationXref27894

biochemicalReaction27883
type: biochemicalReaction
EC-NUMBER: 1.14.99.-
LEFT: phys-ent-participant27888
NAME: RXN-1730
RIGHT: phys-ent-participant27892
XREF: unificationXref27884

phys-ent-participant27892
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27889
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27889
type: smallMolecule
MOLECULAR-WEIGHT: 747.02
NAME: 1-18:3-2-16:3-monogalactosyldiacylglycerol
STRUCTURE: chemicalStructure27891
XREF: unificationXref27890

chemicalStructure27891
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref27890
type: unificationXref
DB: CapCyc
ID: CPD-2190

unificationXref27884
type: unificationXref
DB: CapCyc
ID: RXN-1730

unificationXref27894
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-352

catalysis27866
type: catalysis
CONTROLLED: biochemicalReaction27860
CONTROLLER: phys-ent-participant27870
NAME: ZETA-CAROTENE DESATURASE
XREF: unificationXref27867

biochemicalReaction27860
type: biochemicalReaction
EC-NUMBER: 1.14.99.30
LEFT: phys-ent-participant27865
NAME: RXN1F-146
RIGHT: phys-ent-participant21660
XREF: unificationXref27861

phys-ent-participant27865
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27862
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27862
type: smallMolecule
MOLECULAR-WEIGHT: 540.914
NAME: zeta-carotene
STRUCTURE: chemicalStructure27864
XREF: unificationXref27863

chemicalStructure27864
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD1F-98-atom1" elementType="C" x2="-2.0619" y2="-0.9885"/> <atom id="CPD1F-98-atom2" elementType="C" x2="-1.3387" y2="-2.2209"/> <atom id="CPD1F-98-atom3" elementType="C" x2="20.0891" y2="-1.2438"/> <atom id="CPD1F-98-atom4" elementType="C" x2="19.3658" y2="-0.0114"/> <atom id="CPD1F-98-atom5" elementType="C" x2="7.2348" y2="-2.1601"/> <atom id="CPD1F-98-atom6" elementType="C" x2="10.7924" y2="-0.0723"/> <atom id="CPD1F-98-atom7" elementType="C" x2="4.377" y2="-2.1803"/> <atom id="CPD1F-98-atom8" elementType="C" x2="1.5191" y2="-2.2006"/> <atom id="CPD1F-98-atom9" elementType="C" x2="13.6502" y2="-0.052"/> <atom id="CPD1F-98-atom10" elementType="C" x2="16.508" y2="-0.0317"/> <atom id="CPD1F-98-atom11" elementType="C" x2="8.6578" y2="-1.3249"/> <atom id="CPD1F-98-atom12" elementType="C" x2="9.3694" y2="-0.9074"/> <atom id="CPD1F-98-atom13" elementType="C" x2="5.8" y2="-1.3452"/> <atom id="CPD1F-98-atom14" elementType="C" x2="12.2272" y2="-0.8871"/> <atom id="CPD1F-98-atom15" elementType="C" x2="2.9422" y2="-1.3655"/> <atom id="CPD1F-98-atom16" elementType="C" x2="7.9404" y2="-0.9175"/> <atom id="CPD1F-98-atom17" elementType="C" x2="10.0867" y2="-1.3148"/> <atom id="CPD1F-98-atom18" elementType="C" x2="6.5115" y2="-0.9277"/> <atom id="CPD1F-98-atom19" elementType="C" x2="5.0826" y2="-0.9378"/> <atom id="CPD1F-98-atom20" elementType="C" x2="11.5156" y2="-1.3047"/> <atom id="CPD1F-98-atom21" elementType="C" x2="3.6537" y2="-0.9479"/> <atom id="CPD1F-98-atom22" elementType="C" x2="2.2248" y2="-0.9581"/> <atom id="CPD1F-98-atom23" elementType="C" x2="12.9445" y2="-1.2945"/> <atom id="CPD1F-98-atom24" elementType="C" x2="-0.633" y2="-0.9784"/> <atom id="CPD1F-98-atom25" elementType="C" x2="18.6602" y2="-1.254"/> <atom id="CPD1F-98-atom26" elementType="C" x2="15.8024" y2="-1.2743"/> <atom id="CPD1F-98-atom27" elementType="C" x2="0.0844" y2="-1.3858"/> <atom id="CPD1F-98-atom28" elementType="C" x2="17.9428" y2="-0.8466"/> <atom id="CPD1F-98-atom29" elementType="C"…

unificationXref27863
type: unificationXref
DB: CapCyc
ID: CPD1F-98

unificationXref27861
type: unificationXref
DB: CapCyc
ID: RXN1F-146

unificationXref27867
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-668

catalysis27858
type: catalysis
CONTROLLED: biochemicalReaction27854
CONTROLLER: phys-ent-participant27853
NAME: SQUALENE MONOOXYGENASE
XREF: unificationXref27859

biochemicalReaction27854
type: biochemicalReaction
EC-NUMBER: 1.14.99.7
LEFT: phys-ent-participant26024
LEFT: phys-ent-participant26753
LEFT: phys-ent-participant23342
NAME: RXN66-282
RIGHT: phys-ent-participant21729
RIGHT: phys-ent-participant26766
RIGHT: phys-ent-participant20951
XREF: unificationXref27855

phys-ent-participant26024
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26020
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26020
type: smallMolecule
MOLECULAR-WEIGHT: 410.725
NAME: squalene
STRUCTURE: chemicalStructure26023
XREF: unificationXref26022
XREF: unificationXref26021

chemicalStructure26023
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SQUALENE-atom1" elementType="C" x2="0.06777" y2="-0.53388"/> <atom id="SQUALENE-atom2" elementType="C" x2="0.99669" y2="0.16364"/> <atom id="SQUALENE-atom3" elementType="C" x2="-0.73223" y2="0.0843"/> <atom id="SQUALENE-atom4" elementType="C" x2="0.6" y2="-0.53388"/> <atom id="SQUALENE-atom5" elementType="C" x2="-0.32562" y2="0.31901"/> <atom id="SQUALENE-atom6" elementType="C" x2="0.2" y2="-0.60992"/> <atom id="SQUALENE-atom7" elementType="C" x2="0.33223" y2="-1.0"/> <atom id="SQUALENE-atom8" elementType="C" x2="-0.19339" y2="-0.07107"/> <atom id="SQUALENE-atom9" elementType="C" x2="0.73223" y2="0.16364"/> <atom id="SQUALENE-atom10" elementType="C" x2="-0.32562" y2="0.16364"/> <atom id="SQUALENE-atom11" elementType="C" x2="0.33223" y2="-0.84463"/> <atom id="SQUALENE-atom12" elementType="C" x2="0.86777" y2="0.0843"/> <atom id="SQUALENE-atom13" elementType="C" x2="0.6" y2="-0.37851"/> <atom id="SQUALENE-atom14" elementType="C" x2="-0.19339" y2="0.0843"/> <atom id="SQUALENE-atom15" elementType="C" x2="0.46777" y2="-0.60992"/> <atom id="SQUALENE-atom16" elementType="C" x2="-0.46116" y2="0.0843"/> <atom id="SQUALENE-atom17" elementType="C" x2="0.86777" y2="-0.07107"/> <atom id="SQUALENE-atom18" elementType="C" x2="-0.86777" y2="0.31901"/> <atom id="SQUALENE-atom19" elementType="C" x2="0.73223" y2="-0.29917"/> <atom id="SQUALENE-atom20" elementType="C" x2="0.46446" y2="-0.29917"/> <atom id="SQUALENE-atom21" elementType="C" x2="-0.86777" y2="0.16364"/> <atom id="SQUALENE-atom22" elementType="C" x2="0.06777" y2="-0.37851"/> <atom id="SQUALENE-atom23" elementType="C" x2="0.2" y2="-0.76529"/> <atom id="SQUALENE-atom24" elementType="C" x2="-0.06116" y2="-0.29917"/> <atom id="SQUALENE-atom25" elementType="C" x2="-1.0" y2="0.0843"/> <atom id="SQUALENE-atom26" elementType="C" x2="-0.59669" y2="0.16364"/> <atom id="SQUALENE-atom27" elementType="C" x2="-0.06116" y2="-0.14711"/> <atom id="SQUALENE-atom28" elementType="C" x2="0.73223" y2="-0.14711"/> <atom id="SQUALENE-ato…

unificationXref26022
type: unificationXref
DB: CapCyc
ID: SQUALENE

unificationXref26021
type: unificationXref
DB: CAS
ID: 111-02-4

phys-ent-participant21729
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21725
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21725
type: smallMolecule
MOLECULAR-WEIGHT: 426.724
NAME: (S)-2,3-Epoxysqualene
STRUCTURE: chemicalStructure21728
SYNONYMS: Squalene 2,3-epoxide
SYNONYMS: Squalene 2,3-oxide
SYNONYMS: (S)-Squalene-2,3-epoxide
SYNONYMS: 2,3-EDSQ
SYNONYMS: 2,3-epoxisqualene
SYNONYMS: oxidosqualene
XREF: unificationXref21727
XREF: unificationXref21726

chemicalStructure21728
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="EPOXYSQUALENE-atom1" elementType="C" x2="4.1583" y2="1.9667"/> <atom id="EPOXYSQUALENE-atom2" elementType="C" x2="4.1583" y2="2.725"/> <atom id="EPOXYSQUALENE-atom3" elementType="C" x2="4.8078" y2="3.1084"/> <atom id="EPOXYSQUALENE-atom4" elementType="C" x2="4.8078" y2="1.5917"/> <atom id="EPOXYSQUALENE-atom5" elementType="C" x2="5.4656" y2="2.725"/> <atom id="EPOXYSQUALENE-atom6" elementType="C" x2="6.1282" y2="3.1057"/> <atom id="EPOXYSQUALENE-atom7" elementType="C" x2="6.7907" y2="2.7281"/> <atom id="EPOXYSQUALENE-atom8" elementType="C" x2="5.4656" y2="1.9667"/> <atom id="EPOXYSQUALENE-atom9" elementType="C" x2="6.7855" y2="1.9619"/> <atom id="EPOXYSQUALENE-atom10" elementType="C" x2="6.7813" y2="0.4256"/> <atom id="EPOXYSQUALENE-atom11" elementType="C" x2="6.1161" y2="0.8134"/> <atom id="EPOXYSQUALENE-atom12" elementType="C" x2="6.1229" y2="1.5812"/> <atom id="EPOXYSQUALENE-atom13" elementType="C" x2="7.4507" y2="1.5742"/> <atom id="EPOXYSQUALENE-atom14" elementType="C" x2="8.1207" y2="1.9623"/> <atom id="EPOXYSQUALENE-atom15" elementType="C" x2="8.7934" y2="1.582"/> <atom id="EPOXYSQUALENE-atom16" elementType="C" x2="7.4534" y2="0.8057"/> <atom id="EPOXYSQUALENE-atom17" elementType="C" x2="8.7908" y2="0.8055"/> <atom id="EPOXYSQUALENE-atom18" elementType="C" x2="9.483" y2="0.4108"/> <atom id="EPOXYSQUALENE-atom19" elementType="C" x2="9.4717" y2="-0.3636"/> <atom id="EPOXYSQUALENE-atom20" elementType="C" x2="8.7921" y2="-0.7512"/> <atom id="EPOXYSQUALENE-atom21" elementType="C" x2="8.1333" y2="-0.3399"/> <atom id="EPOXYSQUALENE-atom22" elementType="C" x2="8.1208" y2="0.4174"/> <atom id="EPOXYSQUALENE-atom23" elementType="C" x2="5.4583" y2="1.1"/> <atom id="EPOXYSQUALENE-atom24" elementType="C" x2="6.7791" y2="1.2209"/> <atom id="EPOXYSQUALENE-atom25" elementType="C" x2="5.3416" y2="3.4084"/> <atom id="EPOXYSQUALENE-atom26" elementType="O" x2="4.175" y2="3.4417"/> <atom id="EPOXYSQUALENE-atom27" elementType="C" x2="7.4708" y2="2.3"/> <atom id="EPOXYSQUA…

unificationXref21727
type: unificationXref
DB: CapCyc
ID: EPOXYSQUALENE

unificationXref21726
type: unificationXref
DB: CAS
ID: 9029-62-3

unificationXref27855
type: unificationXref
DB: CapCyc
ID: RXN66-282

phys-ent-participant27853
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27851
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27851
type: protein
NAME: SQUALENE MONOOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref27852

unificationXref27852
type: unificationXref
DB: CapCyc
ID: SGNU198625-MONOMER

unificationXref27859
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-314

catalysis27856
type: catalysis
CONTROLLED: biochemicalReaction27854
CONTROLLER: phys-ent-participant27848
NAME: SQUALENE MONOOXYGENASE
XREF: unificationXref27857

phys-ent-participant27848
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27846
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27846
type: protein
NAME: SQUALENE MONOOXYGENASE
ORGANISM: bioSource20982
XREF: unificationXref27847

unificationXref27847
type: unificationXref
DB: CapCyc
ID: SGNU200498-MONOMER

unificationXref27857
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-426

catalysis27849
type: catalysis
CONTROLLED: biochemicalReaction27837
CONTROLLER: phys-ent-participant27853
NAME: SQUALENE MONOOXYGENASE
XREF: unificationXref27850

biochemicalReaction27837
type: biochemicalReaction
EC-NUMBER: 1.14.99.7
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant27182
LEFT: phys-ent-participant26024
NAME: Squalene monooxygenase
RIGHT: phys-ent-participant21729
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant27179
SYNONYMS: Squalene epoxidase
XREF: unificationXref27838

unificationXref27838
type: unificationXref
DB: CapCyc
ID: SQUALENE-MONOOXYGENASE-RXN

unificationXref27850
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-315

catalysis27844
type: catalysis
CONTROLLED: biochemicalReaction27837
CONTROLLER: phys-ent-participant27848
NAME: SQUALENE MONOOXYGENASE
XREF: unificationXref27845

unificationXref27845
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-427

catalysis27839
type: catalysis
CONTROLLED: biochemicalReaction27837
CONTROLLER: phys-ent-participant27843
NAME: SQUALENE EPOXIDASE
XREF: unificationXref27840

phys-ent-participant27843
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27841
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27841
type: protein
NAME: SQUALENE EPOXIDASE
ORGANISM: bioSource20982
XREF: unificationXref27842

unificationXref27842
type: unificationXref
DB: CapCyc
ID: SGNU202137-MONOMER

unificationXref27840
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-549

catalysis27832
type: catalysis
CONTROLLED: biochemicalReaction27825
CONTROLLER: phys-ent-participant27836
NAME: SUPEROXIDE DISMUTASE
XREF: unificationXref27833

biochemicalReaction27825
type: biochemicalReaction
EC-NUMBER: 1.15.1.1
LEFT: phys-ent-participant27831
LEFT: phys-ent-participant23348
NAME: Superoxide dismutase
RIGHT: phys-ent-participant27200
RIGHT: phys-ent-participant23342
XREF: unificationXref27826

phys-ent-participant27831
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27827
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule27827
type: smallMolecule
MOLECULAR-WEIGHT: 31.999
NAME: O2-
STRUCTURE: chemicalStructure27830
SYNONYMS: Superoxide anion
SYNONYMS: peroxide radical
SYNONYMS: O2(.-)
SYNONYMS: superoxide
XREF: unificationXref27829
XREF: unificationXref27828

chemicalStructure27830
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SUPER-OXIDE-atom1" elementType="O" x2="1.4083" y2="2.3"/> <atom id="SUPER-OXIDE-atom2" elementType="O" x2="2.4954" y2="1.8833" formalCharge="-1"/> <bond id="SUPER-OXIDE-bond1" atomRefs="SUPER-OXIDE-atom1 SUPER-OXIDE-atom2" order="2"/> <formula concise="O 2" formalCharge="-1"/> 31.999 O=[O-]

unificationXref27829
type: unificationXref
DB: CapCyc
ID: SUPER-OXIDE

unificationXref27828
type: unificationXref
DB: LIGAND
ID: C00704

unificationXref27826
type: unificationXref
DB: CapCyc
ID: SUPEROX-DISMUT-RXN

phys-ent-participant27836
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27834
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27834
type: protein
NAME: SUPEROXIDE DISMUTASE
ORGANISM: bioSource20982
XREF: unificationXref27835

unificationXref27835
type: unificationXref
DB: CapCyc
ID: SGNU204662-MONOMER

unificationXref27833
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-696

catalysis27806
type: catalysis
CONTROLLED: biochemicalReaction27801
CONTROLLER: phys-ent-participant27810
NAME: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT
XREF: unificationXref27807

biochemicalReaction27801
type: biochemicalReaction
EC-NUMBER: 1.17.4.-
LEFT: phys-ent-participant27179
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant27805
NAME: RXN0-1
RIGHT: phys-ent-participant27182
RIGHT: phys-ent-participant25156
XREF: unificationXref27802

phys-ent-participant27805
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27803
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27803
type: smallMolecule
NAME: a 2'-deoxyribonucleoside diphosphate
SYNONYMS: a 2'-deoxyribonucleoside diphosphate
SYNONYMS: 2'-deoxyribonucleoside diphosphate
SYNONYMS: deoxynucleoside diphosphate
SYNONYMS: deoxyribonucleoside diphosphate
XREF: unificationXref27804

unificationXref27804
type: unificationXref
DB: CapCyc
ID: Deoxy-Ribonucleoside-Diphosphates

phys-ent-participant25156
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25154
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25154
type: smallMolecule
NAME: a ribonucleoside diphosphate
SYNONYMS: a nucleoside diphosphate
SYNONYMS: ribonucleoside diphosphate
SYNONYMS: nucleoside diphosphate
XREF: unificationXref25155

unificationXref25155
type: unificationXref
DB: CapCyc
ID: Ribonucleoside-Diphosphates

unificationXref27802
type: unificationXref
DB: CapCyc
ID: RXN0-1

unificationXref27807
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-163

catalysis27754
type: catalysis
CONTROLLED: biochemicalReaction27740
CONTROLLER: phys-ent-participant27758
NAME: BETAINE ALDEHYDE DEHYDROGENASE
XREF: unificationXref27755

biochemicalReaction27740
type: biochemicalReaction
EC-NUMBER: 1.2.1.8
LEFT: phys-ent-participant27747
LEFT: phys-ent-participant27218
LEFT: phys-ent-participant20951
NAME: Betaine-aldehyde dehydrogenase
RIGHT: phys-ent-participant27753
RIGHT: phys-ent-participant27230
XREF: unificationXref27741

phys-ent-participant27747
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27742
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27742
type: smallMolecule
MOLECULAR-WEIGHT: 102.156
NAME: betaine aldehyde
STRUCTURE: chemicalStructure27746
SYNONYMS: glycine betaine aldehyde
XREF: unificationXref27745
XREF: unificationXref27744
XREF: unificationXref27743

chemicalStructure27746
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="BETAINE_ALDEHYDE-atom1" elementType="N" x2="0.4819944" y2="-0.4155125"/> <atom id="BETAINE_ALDEHYDE-atom2" elementType="C" x2="0.54016614" y2="-1.0"/> <atom id="BETAINE_ALDEHYDE-atom3" elementType="C" x2="0.9972298" y2="-0.698061"/> <atom id="BETAINE_ALDEHYDE-atom4" elementType="O" x2="-1.0" y2="-0.7036011"/> <atom id="BETAINE_ALDEHYDE-atom5" elementType="C" x2="-0.48753464" y2="-0.4155125"/> <atom id="BETAINE_ALDEHYDE-atom6" elementType="C" x2="-0.008310258" y2="-0.69529086"/> <atom id="BETAINE_ALDEHYDE-atom7" elementType="C" x2="0.8171744" y2="0.06648195"/> <bond id="BETAINE_ALDEHYDE-bond1" atomRefs="BETAINE_ALDEHYDE-atom7 BETAINE_ALDEHYDE-atom1" order="1"/> <bond id="BETAINE_ALDEHYDE-bond2" atomRefs="BETAINE_ALDEHYDE-atom6 BETAINE_ALDEHYDE-atom1" order="1"/> <bond id="BETAINE_ALDEHYDE-bond3" atomRefs="BETAINE_ALDEHYDE-atom5 BETAINE_ALDEHYDE-atom6" order="1"/> <bond id="BETAINE_ALDEHYDE-bond4" atomRefs="BETAINE_ALDEHYDE-atom4 BETAINE_ALDEHYDE-atom5" order="2"/> <bond id="BETAINE_ALDEHYDE-bond5" atomRefs="BETAINE_ALDEHYDE-atom3 BETAINE_ALDEHYDE-atom1" order="1"/> <bond id="BETAINE_ALDEHYDE-bond6" atomRefs="BETAINE_ALDEHYDE-atom2 BETAINE_ALDEHYDE-atom1" order="1"/> <formula concise="C 5 H 12 N 1 O 1" formalCharge="0"/> 102.156 C(=O)CN(C)(C)C

unificationXref27745
type: unificationXref
DB: CapCyc
ID: BETAINE_ALDEHYDE

unificationXref27744
type: unificationXref
DB: CAS
ID: 7418-61-3

unificationXref27743
type: unificationXref
DB: LIGAND
ID: C00576

phys-ent-participant27753
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27748
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27748
type: smallMolecule
MOLECULAR-WEIGHT: 117.147
NAME: glycine betaine
STRUCTURE: chemicalStructure27752
SYNONYMS: oxyneurine
SYNONYMS: lycine
SYNONYMS: acidin-pepsin
SYNONYMS: betaine
SYNONYMS: trimethylammonioacetate
SYNONYMS: N,N,N-trimethylglycine
XREF: unificationXref27751
XREF: unificationXref27750
XREF: unificationXref27749

chemicalStructure27752
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="BETAINE-atom1" elementType="C" x2="-1.0" y2="-0.03618"/> <atom id="BETAINE-atom2" elementType="C" x2="0.51974" y2="-0.60855"/> <atom id="BETAINE-atom3" elementType="C" x2="-0.13158" y2="0.04276"/> <atom id="BETAINE-atom4" elementType="C" x2="-0.05263" y2="-0.82237"/> <atom id="BETAINE-atom5" elementType="N" x2="-0.52632" y2="-0.43092" formalCharge="1"/> <atom id="BETAINE-atom6" elementType="C" x2="-0.92105" y2="-0.90461"/> <atom id="BETAINE-atom7" elementType="O" x2="0.99671" y2="-1.0" formalCharge="-1"/> <atom id="BETAINE-atom8" elementType="O" x2="0.625" y2="-0.00329"/> <bond id="BETAINE-bond1" atomRefs="BETAINE-atom8 BETAINE-atom2" order="2"/> <bond id="BETAINE-bond2" atomRefs="BETAINE-atom7 BETAINE-atom2" order="1"/> <bond id="BETAINE-bond3" atomRefs="BETAINE-atom6 BETAINE-atom5" order="1"/> <bond id="BETAINE-bond4" atomRefs="BETAINE-atom5 BETAINE-atom4" order="1"/> <bond id="BETAINE-bond5" atomRefs="BETAINE-atom4 BETAINE-atom2" order="1"/> <bond id="BETAINE-bond6" atomRefs="BETAINE-atom3 BETAINE-atom5" order="1"/> <bond id="BETAINE-bond7" atomRefs="BETAINE-atom1 BETAINE-atom5" order="1"/> <formula concise="C 5 H 11 N 1 O 2" formalCharge="0"/> 117.147 C([O-])(=O)C[N+](C)(C)C

unificationXref27751
type: unificationXref
DB: CapCyc
ID: BETAINE

unificationXref27750
type: unificationXref
DB: CAS
ID: 107-43-7

unificationXref27749
type: unificationXref
DB: LIGAND
ID: C00719

unificationXref27741
type: unificationXref
DB: CapCyc
ID: BADH-RXN

phys-ent-participant27758
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27756
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27756
type: protein
NAME: BETAINE ALDEHYDE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27757

unificationXref27757
type: unificationXref
DB: CapCyc
ID: SGNU197964-MONOMER

unificationXref27755
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-240

catalysis27731
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27735
NAME: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
XREF: unificationXref27732

biochemicalReaction27694
type: biochemicalReaction
DELTA-G: 1.5
EC-NUMBER: 1.2.1.12
LEFT: phys-ent-participant22057
LEFT: phys-ent-participant20970
LEFT: phys-ent-participant27218
NAME: Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating)
RIGHT: phys-ent-participant25322
RIGHT: phys-ent-participant27230
SYNONYMS: GAPDH
SYNONYMS: Triosephosphate dehydrogenase
SYNONYMS: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase
SYNONYMS: glyceraldehyde 3-phosphate oxidation
XREF: unificationXref27695

phys-ent-participant22057
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22052
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22052
type: smallMolecule
MOLECULAR-WEIGHT: 170.058
NAME: D-glyceraldehyde-3-phosphate
STRUCTURE: chemicalStructure22056
SYNONYMS: D-glyceraldehdye-3-phosphate
SYNONYMS: 3-phosphoglyceraldehyde
SYNONYMS: D-glyceraldehyde-3-P
SYNONYMS: glyceraldehyde-3-phosphate
SYNONYMS: gap
SYNONYMS: glyceraldehyde-phosphate
SYNONYMS: glyceraldehyde-P
SYNONYMS: glyceraldehyde-3-P
SYNONYMS: (2R)-2-hydroxy-3-(phosphonooxy)-propanal
XREF: unificationXref22055
XREF: unificationXref22054
XREF: unificationXref22053

chemicalStructure22056
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GAP-atom1" elementType="H" x2="2.4298" y2="-4.1021"/> <atom id="GAP-atom2" elementType="O" x2="0.0" y2="-5.4935"/> <atom id="GAP-atom3" elementType="O" x2="5.0762" y2="-1.3256"/> <atom id="GAP-atom4" elementType="O" x2="1.2149" y2="-4.7978"/> <atom id="GAP-atom5" elementType="O" x2="3.751" y2="0.0"/> <atom id="GAP-atom6" elementType="O" x2="3.751" y2="-2.6508"/> <atom id="GAP-atom7" elementType="C" x2="0.005" y2="-4.0936"/> <atom id="GAP-atom8" elementType="C" x2="1.2248" y2="-1.9979"/> <atom id="GAP-atom9" elementType="O" x2="2.4528" y2="-1.3256"/> <atom id="GAP-atom10" elementType="C" x2="1.2199" y2="-3.3978"/> <atom id="GAP-atom11" elementType="P" x2="3.751" y2="-1.3256"/> <bond id="GAP-bond1" atomRefs="GAP-atom9 GAP-atom11" order="1"/> <bond id="GAP-bond2" atomRefs="GAP-atom8 GAP-atom10" order="1"/> <bond id="GAP-bond3" atomRefs="GAP-atom8 GAP-atom9" order="1"/> <bond id="GAP-bond4" atomRefs="GAP-atom7 GAP-atom10" order="1"/> <bond id="GAP-bond5" atomRefs="GAP-atom6 GAP-atom11" order="1"/> <bond id="GAP-bond6" atomRefs="GAP-atom5 GAP-atom11" order="1"/> <bond id="GAP-bond7" atomRefs="GAP-atom10 GAP-atom4" order="1"/> <bond id="GAP-bond8" atomRefs="GAP-atom3 GAP-atom11" order="2"/> <bond id="GAP-bond9" atomRefs="GAP-atom2 GAP-atom7" order="2"/> <bond id="GAP-bond10" atomRefs="GAP-atom10 GAP-atom1" order="1"/> <formula concise="C 3 H 7 O 6 P 1" formalCharge="0"/> 170.058 C(=O)[CH](O)COP(O)(O)=O

unificationXref22055
type: unificationXref
DB: CapCyc
ID: GAP

unificationXref22054
type: unificationXref
DB: CAS
ID: 142-10-9

unificationXref22053
type: unificationXref
DB: LIGAND
ID: C00661

phys-ent-participant20970
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20965
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20965
type: smallMolecule
MOLECULAR-WEIGHT: 94.971
NAME: phosphate
STRUCTURE: chemicalStructure20969
SYNONYMS: inorganic phosphate
SYNONYMS: phosphate-inorganic
SYNONYMS: Pi
SYNONYMS: orthophosphate
SYNONYMS: PO43-
SYNONYMS: HPO42-
SYNONYMS: HPO4-2
XREF: unificationXref20968
XREF: unificationXref20967
XREF: unificationXref20966

chemicalStructure20969
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="Pi-atom1" elementType="P" x2="-0.00166" y2="-0.00166"/> <atom id="Pi-atom2" elementType="O" x2="0.99667" y2="-0.00166" formalCharge="-1"/> <atom id="Pi-atom3" elementType="O" x2="-0.00166" y2="0.99667" formalCharge="-1"/> <atom id="Pi-atom4" elementType="O" x2="-0.00166" y2="-1.0" formalCharge="-1"/> <atom id="Pi-atom5" elementType="O" x2="-1.0" y2="-0.00166"/> <bond id="Pi-bond1" atomRefs="Pi-atom5 Pi-atom1" order="2"/> <bond id="Pi-bond2" atomRefs="Pi-atom4 Pi-atom1" order="1"/> <bond id="Pi-bond3" atomRefs="Pi-atom3 Pi-atom1" order="1"/> <bond id="Pi-bond4" atomRefs="Pi-atom2 Pi-atom1" order="1"/> <formula concise="O 4 P 1" formalCharge="-3"/> 94.971 P([O-])([O-])(=O)[O-]

unificationXref20968
type: unificationXref
DB: CapCyc
ID: Pi

unificationXref20967
type: unificationXref
DB: CAS
ID: 14265-44-2

unificationXref20966
type: unificationXref
DB: LIGAND
ID: C00009

phys-ent-participant25322
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25317
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25317
type: smallMolecule
MOLECULAR-WEIGHT: 266.038
NAME: 1,3-diphosphateglycerate
STRUCTURE: chemicalStructure25321
SYNONYMS: glycerate 1,3-diphosphate
SYNONYMS: 3-phospho-D-glyceroyl-phosphate
SYNONYMS: 3-phosphoglyceroyl-P
SYNONYMS: P-glyceroyl-P
SYNONYMS: phosphoglyceroyl-P
SYNONYMS: 3-phosphoglyceroyl-phosphate
SYNONYMS: 3-P-glyceroyl-P
SYNONYMS: DPG
SYNONYMS: 13-DPG
SYNONYMS: glycerate 1,3-bisphosphate
SYNONYMS: 1,3-biphosphoglycerate
XREF: unificationXref25320
XREF: unificationXref25319
XREF: unificationXref25318

chemicalStructure25321
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DPG-atom1" elementType="C" x2="-0.02174" y2="-0.73602"/> <atom id="DPG-atom2" elementType="P" x2="0.73292" y2="-0.48137"/> <atom id="DPG-atom3" elementType="O" x2="0.73292" y2="-0.21739"/> <atom id="DPG-atom4" elementType="P" x2="-0.73602" y2="-0.48137"/> <atom id="DPG-atom5" elementType="O" x2="0.49379" y2="-0.48137"/> <atom id="DPG-atom6" elementType="O" x2="-0.73602" y2="-0.21739"/> <atom id="DPG-atom7" elementType="O" x2="-0.52484" y2="-0.48137"/> <atom id="DPG-atom8" elementType="O" x2="-0.02174" y2="-1.0"/> <atom id="DPG-atom9" elementType="C" x2="-0.25776" y2="-0.48137"/> <atom id="DPG-atom10" elementType="O" x2="0.99689" y2="-0.48137"/> <atom id="DPG-atom11" elementType="O" x2="-0.25776" y2="-0.21739"/> <atom id="DPG-atom12" elementType="O" x2="-0.73602" y2="-0.74534"/> <atom id="DPG-atom13" elementType="O" x2="0.73292" y2="-0.74534"/> <atom id="DPG-atom14" elementType="O" x2="-1.0" y2="-0.48137"/> <atom id="DPG-atom15" elementType="C" x2="0.21739" y2="-0.48137"/> <bond id="DPG-bond1" atomRefs="DPG-atom15 DPG-atom5" order="1"/> <bond id="DPG-bond2" atomRefs="DPG-atom9 DPG-atom1" order="1"/> <bond id="DPG-bond3" atomRefs="DPG-atom9 DPG-atom11" order="2"/> <bond id="DPG-bond4" atomRefs="DPG-atom7 DPG-atom9" order="1"/> <bond id="DPG-bond5" atomRefs="DPG-atom5 DPG-atom2" order="1"/> <bond id="DPG-bond6" atomRefs="DPG-atom4 DPG-atom7" order="1"/> <bond id="DPG-bond7" atomRefs="DPG-atom4 DPG-atom6" order="1"/> <bond id="DPG-bond8" atomRefs="DPG-atom4 DPG-atom12" order="1"/> <bond id="DPG-bond9" atomRefs="DPG-atom4 DPG-atom14" order="2"/> <bond id="DPG-bond10" atomRefs="DPG-atom2 DPG-atom3" order="1"/> <bond id="DPG-bond11" atomRefs="DPG-atom2 DPG-atom13" order="1"/> <bond id="DPG-bond12" atomRefs="DPG-atom2 DPG-atom10" order="2"/> <bond id="DPG-bond13" atomRefs="DPG-atom1 DPG-atom15" order="1"/> <bond id="DPG-bond14" atomRefs="DPG-atom1 DPG-atom8" order="1"/> <formula concise="C 3 H 8 O 10 P 2" formalCharge="0"/> 266.038 C(OP(O)(O)=O)(=O)C(O)COP(O)(O)=O

unificationXref25320
type: unificationXref
DB: CapCyc
ID: DPG

unificationXref25319
type: unificationXref
DB: CAS
ID: 1981-49-3

unificationXref25318
type: unificationXref
DB: LIGAND
ID: C00236

unificationXref27695
type: unificationXref
DB: CapCyc
ID: GAPOXNPHOSPHN-RXN

phys-ent-participant27735
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27733
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27733
type: protein
NAME: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27734

unificationXref27734
type: unificationXref
DB: CapCyc
ID: SGNU196222-MONOMER

unificationXref27732
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-16

catalysis27726
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27730
NAME: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
XREF: unificationXref27727

phys-ent-participant27730
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27728
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27728
type: protein
NAME: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27729

unificationXref27729
type: unificationXref
DB: CapCyc
ID: SGNU196313-MONOMER

unificationXref27727
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-37

catalysis27721
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27725
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27722

phys-ent-participant27725
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27723
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27723
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27724

unificationXref27724
type: unificationXref
DB: CapCyc
ID: SGNU196643-MONOMER

unificationXref27722
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-78

catalysis27716
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27720
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27717

phys-ent-participant27720
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27718
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27718
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27719

unificationXref27719
type: unificationXref
DB: CapCyc
ID: SGNU196763-MONOMER

unificationXref27717
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-101

catalysis27711
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27715
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27712

phys-ent-participant27715
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27713
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27713
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27714

unificationXref27714
type: unificationXref
DB: CapCyc
ID: SGNU198151-MONOMER

unificationXref27712
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-268

catalysis27706
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27710
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27707

phys-ent-participant27710
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27708
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27708
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27709

unificationXref27709
type: unificationXref
DB: CapCyc
ID: SGNU201192-MONOMER

unificationXref27707
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-477

catalysis27701
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27705
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27702

phys-ent-participant27705
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27703
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27703
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27704

unificationXref27704
type: unificationXref
DB: CapCyc
ID: SGNU199083-MONOMER

unificationXref27702
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-737

catalysis27696
type: catalysis
CONTROLLED: biochemicalReaction27694
CONTROLLER: phys-ent-participant27700
NAME: glyceraldehyde-3-phosphate dehydrogenase
XREF: unificationXref27697

phys-ent-participant27700
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27698
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27698
type: protein
NAME: glyceraldehyde-3-phosphate dehydrogenase
ORGANISM: bioSource20982
XREF: unificationXref27699

unificationXref27699
type: unificationXref
DB: CapCyc
ID: SGNU199126-MONOMER

unificationXref27697
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-743

catalysis27644
type: catalysis
CONTROLLED: biochemicalReaction27636
CONTROLLER: phys-ent-participant27648
NAME: indole-3-acetaldehyde oxidase
XREF: unificationXref27645

biochemicalReaction27636
type: biochemicalReaction
EC-NUMBER: 1.2.3.7
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant27638
NAME: Indole-3-acetaldehyde oxidase
RIGHT: phys-ent-participant27643
XREF: unificationXref27637

phys-ent-participant27638
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23557
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule23557
type: smallMolecule
MOLECULAR-WEIGHT: 159.187
NAME: indole acetaldehyde
STRUCTURE: chemicalStructure23560
SYNONYMS: indole-3-acetaldehyde
SYNONYMS: 2-(indol-3-yl)acetaldehyde
XREF: unificationXref23559
XREF: unificationXref23558

chemicalStructure23560
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="INDOLE_ACETALDEHYDE-atom1" elementType="C" x2="-0.6991404" y2="0.048710585"/> <atom id="INDOLE_ACETALDEHYDE-atom2" elementType="C" x2="-0.40687674" y2="0.21489966"/> <atom id="INDOLE_ACETALDEHYDE-atom3" elementType="O" x2="0.9971347" y2="-0.15472782"/> <atom id="INDOLE_ACETALDEHYDE-atom4" elementType="C" x2="-0.6991404" y2="0.7249284"/> <atom id="INDOLE_ACETALDEHYDE-atom5" elementType="C" x2="0.19484246" y2="0.55873924"/> <atom id="INDOLE_ACETALDEHYDE-atom6" elementType="C" x2="0.19484246" y2="0.21489966"/> <atom id="INDOLE_ACETALDEHYDE-atom7" elementType="C" x2="0.9971347" y2="0.22349566"/> <atom id="INDOLE_ACETALDEHYDE-atom8" elementType="C" x2="-1.0" y2="0.21489966"/> <atom id="INDOLE_ACETALDEHYDE-atom9" elementType="C" x2="-1.0" y2="0.55873924"/> <atom id="INDOLE_ACETALDEHYDE-atom10" elementType="C" x2="-0.40687674" y2="0.55873924"/> <atom id="INDOLE_ACETALDEHYDE-atom11" elementType="C" x2="0.6446992" y2="0.42406875"/> <atom id="INDOLE_ACETALDEHYDE-atom12" elementType="N" x2="-0.10888249" y2="0.7249284"/> <atom id="INDOLE_ACETALDEHYDE-atom13" elementType="H" x2="-0.114613175" y2="1.0"/> <bond id="INDOLE_ACETALDEHYDE-bond1" atomRefs="INDOLE_ACETALDEHYDE-atom12 INDOLE_ACETALDEHYDE-atom13" order="1"/> <bond id="INDOLE_ACETALDEHYDE-bond2" atomRefs="INDOLE_ACETALDEHYDE-atom12 INDOLE_ACETALDEHYDE-atom10" order="A"/> <bond id="INDOLE_ACETALDEHYDE-bond3" atomRefs="INDOLE_ACETALDEHYDE-atom11 INDOLE_ACETALDEHYDE-atom6" order="1"/> <bond id="INDOLE_ACETALDEHYDE-bond4" atomRefs="INDOLE_ACETALDEHYDE-atom10 INDOLE_ACETALDEHYDE-atom4" order="A"/> <bond id="INDOLE_ACETALDEHYDE-bond5" atomRefs="INDOLE_ACETALDEHYDE-atom9 INDOLE_ACETALDEHYDE-atom8" order="A"/> <bond id="INDOLE_ACETALDEHYDE-bond6" atomRefs="INDOLE_ACETALDEHYDE-atom8 INDOLE_ACETALDEHYDE-atom1" order="A"/> <bond id="INDOLE_ACETALDEHYDE-bond7" atomRefs="INDOLE_ACETALDEHYDE-atom7 INDOLE_ACETALDEHYDE-atom11" order="1"/> <bond id="INDOLE_ACETALDEHYDE-bond8" atomRefs="INDOLE_ACETALDEHYDE-atom6 INDOLE_ACETALDEHYD…

unificationXref23559
type: unificationXref
DB: CapCyc
ID: INDOLE_ACETALDEHYDE

unificationXref23558
type: unificationXref
DB: CAS
ID: 2591-98-2

phys-ent-participant27643
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27639
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule27639
type: smallMolecule
MOLECULAR-WEIGHT: 175.187
NAME: indole-3-acetate
STRUCTURE: chemicalStructure27642
SYNONYMS: IAA
SYNONYMS: indole-3-acetic acid
SYNONYMS: indoleacetic acid
SYNONYMS: auxin
SYNONYMS: indoleacetate
XREF: unificationXref27641
XREF: unificationXref27640

chemicalStructure27642
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="INDOLE_ACETATE_AUXIN-atom1" elementType="H" x2="2.1445" y2="0.0"/> <atom id="INDOLE_ACETATE_AUXIN-atom2" elementType="O" x2="3.8341" y2="-4.0901"/> <atom id="INDOLE_ACETATE_AUXIN-atom3" elementType="O" x2="2.4044" y2="-3.7003"/> <atom id="INDOLE_ACETATE_AUXIN-atom4" elementType="C" x2="0.0" y2="-2.1188"/> <atom id="INDOLE_ACETATE_AUXIN-atom5" elementType="C" x2="0.0" y2="-1.2849"/> <atom id="INDOLE_ACETATE_AUXIN-atom6" elementType="C" x2="0.7147" y2="-2.5304"/> <atom id="INDOLE_ACETATE_AUXIN-atom7" elementType="C" x2="0.7147" y2="-0.8735"/> <atom id="INDOLE_ACETATE_AUXIN-atom8" elementType="C" x2="2.8592" y2="-1.2849"/> <atom id="INDOLE_ACETATE_AUXIN-atom9" elementType="C" x2="3.4441" y2="-2.6929"/> <atom id="INDOLE_ACETATE_AUXIN-atom10" elementType="C" x2="3.2276" y2="-3.4836"/> <atom id="INDOLE_ACETATE_AUXIN-atom11" elementType="C" x2="2.8592" y2="-2.1188"/> <atom id="INDOLE_ACETATE_AUXIN-atom12" elementType="C" x2="1.4297" y2="-2.1188"/> <atom id="INDOLE_ACETATE_AUXIN-atom13" elementType="C" x2="1.4297" y2="-1.2849"/> <atom id="INDOLE_ACETATE_AUXIN-atom14" elementType="N" x2="2.1445" y2="-0.8735"/> <bond id="INDOLE_ACETATE_AUXIN-bond1" atomRefs="INDOLE_ACETATE_AUXIN-atom1 INDOLE_ACETATE_AUXIN-atom14" order="1"/> <bond id="INDOLE_ACETATE_AUXIN-bond2" atomRefs="INDOLE_ACETATE_AUXIN-atom2 INDOLE_ACETATE_AUXIN-atom10" order="2"/> <bond id="INDOLE_ACETATE_AUXIN-bond3" atomRefs="INDOLE_ACETATE_AUXIN-atom3 INDOLE_ACETATE_AUXIN-atom10" order="1"/> <bond id="INDOLE_ACETATE_AUXIN-bond4" atomRefs="INDOLE_ACETATE_AUXIN-atom4 INDOLE_ACETATE_AUXIN-atom5" order="A"/> <bond id="INDOLE_ACETATE_AUXIN-bond5" atomRefs="INDOLE_ACETATE_AUXIN-atom6 INDOLE_ACETATE_AUXIN-atom4" order="A"/> <bond id="INDOLE_ACETATE_AUXIN-bond6" atomRefs="INDOLE_ACETATE_AUXIN-atom5 INDOLE_ACETATE_AUXIN-atom7" order="A"/> <bond id="INDOLE_ACETATE_AUXIN-bond7" atomRefs="INDOLE_ACETATE_AUXIN-atom12 INDOLE_ACETATE_AUXIN-atom6" order="A"/> <bond id="INDOLE_ACETATE_AUXIN-bond8" atomRefs="INDOLE_ACETATE…

unificationXref27641
type: unificationXref
DB: CapCyc
ID: INDOLE_ACETATE_AUXIN

unificationXref27640
type: unificationXref
DB: CAS
ID: 87-51-4

unificationXref27637
type: unificationXref
DB: CapCyc
ID: INDOLE-3-ACETALDEHYDE-OXIDASE-RXN

phys-ent-participant27648
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27646
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27646
type: protein
NAME: indole-3-acetaldehyde oxidase
ORGANISM: bioSource20982
XREF: unificationXref27647

unificationXref27647
type: unificationXref
DB: CapCyc
ID: SGNU204691-MONOMER

unificationXref27645
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-699

catalysis27618
type: catalysis
CONTROLLED: biochemicalReaction27612
CONTROLLER: phys-ent-participant27622
NAME: 12-OXOPHYTODIENOATE REDUCTASE
XREF: unificationXref27619

biochemicalReaction27612
type: biochemicalReaction
EC-NUMBER: 1.3.1.42
LEFT: phys-ent-participant26766
LEFT: phys-ent-participant27617
NAME: 12-oxophytodienoate reductase
RIGHT: phys-ent-participant26753
RIGHT: phys-ent-participant21962
XREF: unificationXref27613

phys-ent-participant27617
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27614
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27614
type: smallMolecule
MOLECULAR-WEIGHT: 294.433
NAME: 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate
STRUCTURE: chemicalStructure27616
SYNONYMS: 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoic acid
SYNONYMS: oxopentenyl-cyclopentane-octanoic acid
SYNONYMS: 8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate
XREF: unificationXref27615

chemicalStructure27616
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-730-atom1" elementType="C" x2="0.67229736" y2="-0.41216213"/> <atom id="CPD-730-atom2" elementType="C" x2="-0.4662162" y2="-0.8716216"/> <atom id="CPD-730-atom3" elementType="C" x2="0.114864945" y2="-0.5135135"/> <atom id="CPD-730-atom4" elementType="C" x2="0.125" y2="-0.8952703"/> <atom id="CPD-730-atom5" elementType="O" x2="-0.9594595" y2="-1.0"/> <atom id="CPD-730-atom6" elementType="O" x2="0.9966217" y2="-0.41554052"/> <atom id="CPD-730-atom7" elementType="C" x2="-0.8918919" y2="-0.4662162"/> <atom id="CPD-730-atom8" elementType="O" x2="0.8141892" y2="-0.722973"/> <atom id="CPD-730-atom9" elementType="C" x2="-0.8918919" y2="-0.8243243"/> <atom id="CPD-730-atom10" elementType="C" x2="-0.6655406" y2="-0.5135135"/> <atom id="CPD-730-atom11" elementType="C" x2="-1.0" y2="-0.6554054"/> <atom id="CPD-730-atom12" elementType="C" x2="-0.06756753" y2="-0.402027"/> <atom id="CPD-730-atom13" elementType="C" x2="-0.4527027" y2="-0.402027"/> <atom id="CPD-730-atom14" elementType="C" x2="-0.2635135" y2="-0.5202702"/> <atom id="CPD-730-atom15" elementType="C" x2="0.48648655" y2="-0.5202702"/> <atom id="CPD-730-atom16" elementType="C" x2="-0.6655406" y2="-0.7702702"/> <atom id="CPD-730-atom17" elementType="C" x2="-0.0777027" y2="-0.777027"/> <atom id="CPD-730-atom18" elementType="C" x2="-0.2804054" y2="-0.777027"/> <atom id="CPD-730-atom19" elementType="C" x2="0.3108108" y2="-0.7972973"/> <atom id="CPD-730-atom20" elementType="C" x2="0.8175676" y2="-0.554054"/> <atom id="CPD-730-atom21" elementType="C" x2="0.3175676" y2="-0.39864862"/> <bond id="CPD-730-bond1" atomRefs="CPD-730-atom21 CPD-730-atom15" order="1"/> <bond id="CPD-730-bond2" atomRefs="CPD-730-atom19 CPD-730-atom4" order="1"/> <bond id="CPD-730-bond3" atomRefs="CPD-730-atom18 CPD-730-atom2" order="1"/> <bond id="CPD-730-bond4" atomRefs="CPD-730-atom17 CPD-730-atom18" order="2"/> <bond id="CPD-730-bond5" atomRefs="CPD-730-atom16 CPD-730-atom10" order="1"/> <bond id="CPD-730-bond6" atomRefs="CPD-730-atom1…

unificationXref27615
type: unificationXref
DB: CapCyc
ID: CPD-730

phys-ent-participant21962
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21959
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21959
type: smallMolecule
MOLECULAR-WEIGHT: 292.417
NAME: 12-oxo-cis-10,15-phytodienoate
STRUCTURE: chemicalStructure21961
SYNONYMS: 12-oxo-cis-10,15-phytodienoic acid
SYNONYMS: oxophytodienoic acid
SYNONYMS: (15Z)-12-oxophyto-10,15-dienoate
SYNONYMS: 12-oxo-phytodienoic acid
XREF: unificationXref21960

chemicalStructure21961
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-729-atom1" elementType="C" x2="-0.819788" y2="-0.41696113"/> <atom id="CPD-729-atom2" elementType="C" x2="-0.6219081" y2="-0.55477035"/> <atom id="CPD-729-atom3" elementType="C" x2="0.33215547" y2="-0.409894"/> <atom id="CPD-729-atom4" elementType="C" x2="-0.43462896" y2="-0.8727915"/> <atom id="CPD-729-atom5" elementType="O" x2="0.9964664" y2="-0.42756182"/> <atom id="CPD-729-atom6" elementType="C" x2="-0.8409894" y2="-0.8692579"/> <atom id="CPD-729-atom7" elementType="C" x2="0.8233216" y2="-0.56183743"/> <atom id="CPD-729-atom8" elementType="C" x2="0.6784452" y2="-0.42402828"/> <atom id="CPD-729-atom9" elementType="O" x2="-0.84805655" y2="-1.0"/> <atom id="CPD-729-atom10" elementType="C" x2="-0.42049468" y2="-0.41342753"/> <atom id="CPD-729-atom11" elementType="C" x2="-0.05300355" y2="-0.7809187"/> <atom id="CPD-729-atom12" elementType="C" x2="0.13427567" y2="-0.5229682"/> <atom id="CPD-729-atom13" elementType="O" x2="0.819788" y2="-0.72791517"/> <atom id="CPD-729-atom14" elementType="C" x2="-0.042402804" y2="-0.41342753"/> <atom id="CPD-729-atom15" elementType="C" x2="-0.6289753" y2="-0.7738516"/> <atom id="CPD-729-atom16" elementType="C" x2="0.32508838" y2="-0.80212015"/> <atom id="CPD-729-atom17" elementType="C" x2="0.14487636" y2="-0.8975265"/> <atom id="CPD-729-atom18" elementType="C" x2="-1.0" y2="-0.65017664"/> <atom id="CPD-729-atom19" elementType="C" x2="0.4982332" y2="-0.5300354"/> <atom id="CPD-729-atom20" elementType="C" x2="-0.23674911" y2="-0.5300354"/> <atom id="CPD-729-atom21" elementType="C" x2="-0.2508834" y2="-0.7809187"/> <bond id="CPD-729-bond1" atomRefs="CPD-729-atom21 CPD-729-atom4" order="1"/> <bond id="CPD-729-bond2" atomRefs="CPD-729-atom20 CPD-729-atom14" order="1"/> <bond id="CPD-729-bond3" atomRefs="CPD-729-atom19 CPD-729-atom8" order="1"/> <bond id="CPD-729-bond4" atomRefs="CPD-729-atom18 CPD-729-atom1" order="2"/> <bond id="CPD-729-bond5" atomRefs="CPD-729-atom17 CPD-729-atom11" order="1"/> <bond id="CPD-729-bond6" atom…

unificationXref21960
type: unificationXref
DB: CapCyc
ID: CPD-729

unificationXref27613
type: unificationXref
DB: CapCyc
ID: 12-OXOPHYTODIENOATE-REDUCTASE-RXN

phys-ent-participant27622
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27620
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27620
type: protein
NAME: 12-OXOPHYTODIENOATE REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27621

unificationXref27621
type: unificationXref
DB: CapCyc
ID: SGNU196524-MONOMER

unificationXref27619
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-67

catalysis27605
type: catalysis
CONTROLLED: biochemicalReaction27579
CONTROLLER: phys-ent-participant27609
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
XREF: unificationXref27606

biochemicalReaction27579
type: biochemicalReaction
EC-NUMBER: 1.3.1.33
LEFT: phys-ent-participant26766
LEFT: phys-ent-participant27584
NAME: Protochlorophyllide reductase
RIGHT: phys-ent-participant27518
RIGHT: phys-ent-participant26753
SYNONYMS: Protochlorophyllide oxidoreductase
SYNONYMS: NADPH-protochlorophyllide oxidoreductase
XREF: unificationXref27580

phys-ent-participant27584
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27581
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27581
type: smallMolecule
MOLECULAR-WEIGHT: 614.982
NAME: chlorophyllide a
STRUCTURE: chemicalStructure27583
SYNONYMS: chlorophyllide a
XREF: unificationXref27582

chemicalStructure27583
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CHLOROPHYLLIDE-A-atom1" elementType="C" x2="2.3504" y2="-6.2325"/> <atom id="CHLOROPHYLLIDE-A-atom2" elementType="C" x2="2.7729" y2="-6.9412"/> <atom id="CHLOROPHYLLIDE-A-atom3" elementType="C" x2="3.5774" y2="-6.7583"/> <atom id="CHLOROPHYLLIDE-A-atom4" elementType="C" x2="3.6521" y2="-5.9367"/> <atom id="CHLOROPHYLLIDE-A-atom5" elementType="C" x2="1.5289" y2="-6.1578"/> <atom id="CHLOROPHYLLIDE-A-atom6" elementType="C" x2="4.3607" y2="-5.5142"/> <atom id="CHLOROPHYLLIDE-A-atom7" elementType="C" x2="4.1981" y2="-7.3017"/> <atom id="CHLOROPHYLLIDE-A-atom8" elementType="C" x2="4.0379" y2="-8.1109"/> <atom id="CHLOROPHYLLIDE-A-atom9" elementType="C" x2="2.448" y2="-7.6995"/> <atom id="CHLOROPHYLLIDE-A-atom10" elementType="C" x2="1.1827" y2="-5.4089"/> <atom id="CHLOROPHYLLIDE-A-atom11" elementType="C" x2="0.3629" y2="-5.3169"/> <atom id="CHLOROPHYLLIDE-A-atom12" elementType="C" x2="0.9142" y2="-4.1014"/> <atom id="CHLOROPHYLLIDE-A-atom13" elementType="C" x2="0.1969" y2="-4.5088"/> <atom id="CHLOROPHYLLIDE-A-atom14" elementType="C" x2="4.3492" y2="-4.6893"/> <atom id="CHLOROPHYLLIDE-A-atom15" elementType="C" x2="1.0061" y2="-3.2814"/> <atom id="CHLOROPHYLLIDE-A-atom16" elementType="C" x2="-0.1934" y2="-5.9263"/> <atom id="CHLOROPHYLLIDE-A-atom17" elementType="C" x2="-0.9992" y2="-5.7491"/> <atom id="CHLOROPHYLLIDE-A-atom18" elementType="C" x2="1.7156" y2="-2.9481"/> <atom id="CHLOROPHYLLIDE-A-atom19" elementType="C" x2="3.0029" y2="-2.5949"/> <atom id="CHLOROPHYLLIDE-A-atom20" elementType="C" x2="2.5494" y2="-1.9057"/> <atom id="CHLOROPHYLLIDE-A-atom21" elementType="C" x2="1.7539" y2="-2.1239"/> <atom id="CHLOROPHYLLIDE-A-atom22" elementType="N" x2="2.8939" y2="-5.6118"/> <atom id="CHLOROPHYLLIDE-A-atom23" elementType="N" x2="1.5235" y2="-4.6576"/> <atom id="CHLOROPHYLLIDE-A-atom24" elementType="N" x2="2.4876" y2="-3.2391"/> <atom id="CHLOROPHYLLIDE-A-atom25" elementType="N" x2="3.7482" y2="-4.124"/> <atom id="CHLOROPHYLLIDE-A-atom26" elementType="C" x2="5.07…

unificationXref27582
type: unificationXref
DB: CapCyc
ID: CHLOROPHYLLIDE-A

phys-ent-participant27518
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27513
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27513
type: smallMolecule
MOLECULAR-WEIGHT: 612.967
NAME: monovinyl protochlorophyllide a
STRUCTURE: chemicalStructure27517
SYNONYMS: protochlorophyllide
SYNONYMS: monovinyl protochlrophyllide a
XREF: unificationXref27516
XREF: unificationXref27515
XREF: unificationXref27514

chemicalStructure27517
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom1" elementType="C" x2="2.3504" y2="-6.2325"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom2" elementType="C" x2="2.7729" y2="-6.9412"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom3" elementType="C" x2="3.5774" y2="-6.7583"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom4" elementType="C" x2="3.6521" y2="-5.9367"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom5" elementType="C" x2="1.5289" y2="-6.1578"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom6" elementType="C" x2="4.3607" y2="-5.5142"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom7" elementType="C" x2="4.1981" y2="-7.3017"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom8" elementType="C" x2="4.0379" y2="-8.1109"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom9" elementType="C" x2="2.448" y2="-7.6995"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom10" elementType="C" x2="1.1827" y2="-5.4089"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom11" elementType="C" x2="0.3629" y2="-5.3169"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom12" elementType="C" x2="0.9142" y2="-4.1014"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom13" elementType="C" x2="0.1969" y2="-4.5088"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom14" elementType="C" x2="4.3492" y2="-4.6893"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom15" elementType="C" x2="1.0061" y2="-3.2814"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom16" elementType="C" x2="-0.1934" y2="-5.9263"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom17" elementType="C" x2="-0.9992" y2="-5.7491"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom18" elementType="C" x2="1.7156" y2="-2.9481"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom19" elementType="C" x2="3.0029" y2="-2.5949"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom20" elementType="C" x2="2.5494" y2="-1.9057"/> <atom id="MONO-VINYL-PROTOCHLOROPHYLLIDE-A-atom21" elementType="C" x2="1.7539" y2="-2.1239"/> <atom id="MONO-VINYL-PROTOCHLOROPH…

unificationXref27516
type: unificationXref
DB: CapCyc
ID: MONO-VINYL-PROTOCHLOROPHYLLIDE-A

unificationXref27515
type: unificationXref
DB: CAS
ID: 14751-08-7

unificationXref27514
type: unificationXref
DB: LIGAND
ID: C02880

unificationXref27580
type: unificationXref
DB: CapCyc
ID: PROTOCHLOROPHYLLIDE-REDUCTASE-RXN

phys-ent-participant27609
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27607
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27607
type: protein
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27608

unificationXref27608
type: unificationXref
DB: CapCyc
ID: SGNU196655-MONOMER

unificationXref27606
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-82

catalysis27600
type: catalysis
CONTROLLED: biochemicalReaction27579
CONTROLLER: phys-ent-participant27604
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
XREF: unificationXref27601

phys-ent-participant27604
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27602
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27602
type: protein
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27603

unificationXref27603
type: unificationXref
DB: CapCyc
ID: SGNU197016-MONOMER

unificationXref27601
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-132

catalysis27595
type: catalysis
CONTROLLED: biochemicalReaction27579
CONTROLLER: phys-ent-participant27599
NAME: NADPH PROTOCHLOROPHYLLIDE OXIDOREDUCTASE
XREF: unificationXref27596

phys-ent-participant27599
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27597
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27597
type: protein
NAME: NADPH PROTOCHLOROPHYLLIDE OXIDOREDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27598

unificationXref27598
type: unificationXref
DB: CapCyc
ID: SGNU198257-MONOMER

unificationXref27596
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-283

catalysis27590
type: catalysis
CONTROLLED: biochemicalReaction27579
CONTROLLER: phys-ent-participant27594
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
XREF: unificationXref27591

phys-ent-participant27594
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27592
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27592
type: protein
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27593

unificationXref27593
type: unificationXref
DB: CapCyc
ID: SGNU199226-MONOMER

unificationXref27591
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-752

catalysis27585
type: catalysis
CONTROLLED: biochemicalReaction27579
CONTROLLER: phys-ent-participant27589
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
XREF: unificationXref27586

phys-ent-participant27589
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27587
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27587
type: protein
NAME: PROTOCHLOROPHYLLIDE REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27588

unificationXref27588
type: unificationXref
DB: CapCyc
ID: SGNU199227-MONOMER

unificationXref27586
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-753

catalysis27537
type: catalysis
CONTROLLED: biochemicalReaction27519
CONTROLLER: phys-ent-participant27541
NAME: STEROL DELTA7 REDUCTASE
XREF: unificationXref27538

biochemicalReaction27519
type: biochemicalReaction
EC-NUMBER: 1.3.1.21
LEFT: phys-ent-participant27440
LEFT: phys-ent-participant27521
NAME: RXN-707
RIGHT: phys-ent-participant27525
RIGHT: phys-ent-participant27526
XREF: unificationXref27520

phys-ent-participant27440
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27437
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27437
type: smallMolecule
MOLECULAR-WEIGHT: 396.655
NAME: 5-dehydro episterol
STRUCTURE: chemicalStructure27439
XREF: unificationXref27438

chemicalStructure27439
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-700-atom1" elementType="C" x2="3.0625" y2="0.8937"/> <atom id="CPD-700-atom2" elementType="C" x2="2.348" y2="1.3062"/> <atom id="CPD-700-atom3" elementType="C" x2="4.4914" y2="2.5438"/> <atom id="CPD-700-atom4" elementType="C" x2="5.2059" y2="2.1313"/> <atom id="CPD-700-atom5" elementType="C" x2="5.2059" y2="1.3062"/> <atom id="CPD-700-atom6" elementType="C" x2="4.4914" y2="0.8937"/> <atom id="CPD-700-atom7" elementType="C" x2="5.2059" y2="-0.3438"/> <atom id="CPD-700-atom8" elementType="C" x2="4.4914" y2="0.0687"/> <atom id="CPD-700-atom9" elementType="C" x2="6.705" y2="-0.1863"/> <atom id="CPD-700-atom10" elementType="C" x2="8.3305" y2="-0.4697"/> <atom id="CPD-700-atom11" elementType="C" x2="10.485" y2="-0.12"/> <atom id="CPD-700-atom12" elementType="C" x2="9.3887" y2="0.7964"/> <atom id="CPD-700-atom13" elementType="C" x2="9.6723" y2="0.0217"/> <atom id="CPD-700-atom14" elementType="C" x2="3.777" y2="1.3062"/> <atom id="CPD-700-atom15" elementType="C" x2="3.777" y2="0.4812"/> <atom id="CPD-700-atom16" elementType="C" x2="5.9204" y2="-0.7563"/> <atom id="CPD-700-atom17" elementType="C" x2="6.9887" y2="-0.961"/> <atom id="CPD-700-atom18" elementType="C" x2="6.4596" y2="-1.594"/> <atom id="CPD-700-atom19" elementType="C" x2="2.348" y2="2.1313"/> <atom id="CPD-700-atom20" elementType="O" x2="1.6336" y2="2.5438"/> <atom id="CPD-700-atom21" elementType="C" x2="7.8014" y2="-1.1026"/> <atom id="CPD-700-atom22" elementType="C" x2="3.777" y2="2.1313"/> <atom id="CPD-700-atom23" elementType="C" x2="3.0625" y2="2.5438"/> <atom id="CPD-700-atom24" elementType="C" x2="9.1432" y2="-0.6113"/> <atom id="CPD-700-atom25" elementType="C" x2="9.4269" y2="-1.386"/> <atom id="CPD-700-atom26" elementType="C" x2="5.9204" y2="0.0687"/> <atom id="CPD-700-atom27" elementType="C" x2="5.9204" y2="0.8937"/> <atom id="CPD-700-atom28" elementType="C" x2="6.705" y2="1.1486"/> <atom id="CPD-700-atom29" elementType="C" x2="7.1899" y2="0.4812"/> <bond id="CPD-700-bond1" atomRefs="CPD-…

unificationXref27438
type: unificationXref
DB: CapCyc
ID: CPD-700

phys-ent-participant27521
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26745
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant27525
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27522
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27522
type: smallMolecule
MOLECULAR-WEIGHT: 398.671
NAME: 24-methylenecholesterol
STRUCTURE: chemicalStructure27524
XREF: unificationXref27523

chemicalStructure27524
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-706-atom1" elementType="C" x2="3.0625" y2="0.8937"/> <atom id="CPD-706-atom2" elementType="C" x2="2.348" y2="1.3062"/> <atom id="CPD-706-atom3" elementType="C" x2="4.4914" y2="2.5438"/> <atom id="CPD-706-atom4" elementType="C" x2="5.2059" y2="2.1313"/> <atom id="CPD-706-atom5" elementType="C" x2="5.2059" y2="1.3062"/> <atom id="CPD-706-atom6" elementType="C" x2="4.4914" y2="0.8937"/> <atom id="CPD-706-atom7" elementType="C" x2="5.2059" y2="-0.3438"/> <atom id="CPD-706-atom8" elementType="C" x2="4.4914" y2="0.0687"/> <atom id="CPD-706-atom9" elementType="C" x2="6.705" y2="-0.1863"/> <atom id="CPD-706-atom10" elementType="C" x2="8.3416" y2="-0.396"/> <atom id="CPD-706-atom11" elementType="C" x2="10.4782" y2="0.0504"/> <atom id="CPD-706-atom12" elementType="C" x2="9.3416" y2="0.9165"/> <atom id="CPD-706-atom13" elementType="C" x2="9.6599" y2="0.1553"/> <atom id="CPD-706-atom14" elementType="C" x2="3.777" y2="1.3062"/> <atom id="CPD-706-atom15" elementType="C" x2="3.777" y2="0.4812"/> <atom id="CPD-706-atom16" elementType="C" x2="5.9204" y2="-0.7563"/> <atom id="CPD-706-atom17" elementType="C" x2="7.0233" y2="-0.9474"/> <atom id="CPD-706-atom18" elementType="C" x2="6.5233" y2="-1.6036"/> <atom id="CPD-706-atom19" elementType="C" x2="2.348" y2="2.1313"/> <atom id="CPD-706-atom20" elementType="O" x2="1.6336" y2="2.5438"/> <atom id="CPD-706-atom21" elementType="C" x2="7.8417" y2="-1.0522"/> <atom id="CPD-706-atom22" elementType="C" x2="3.777" y2="2.1313"/> <atom id="CPD-706-atom23" elementType="C" x2="3.0625" y2="2.5438"/> <atom id="CPD-706-atom24" elementType="C" x2="9.1599" y2="-0.5009"/> <atom id="CPD-706-atom25" elementType="C" x2="9.4782" y2="-1.262"/> <atom id="CPD-706-atom26" elementType="C" x2="5.9204" y2="0.0687"/> <atom id="CPD-706-atom27" elementType="C" x2="5.9204" y2="0.8937"/> <atom id="CPD-706-atom28" elementType="C" x2="6.705" y2="1.1486"/> <atom id="CPD-706-atom29" elementType="C" x2="7.1899" y2="0.4812"/> <bond id="CPD-706-bond1" atomRefs="C…

unificationXref27523
type: unificationXref
DB: CapCyc
ID: CPD-706

phys-ent-participant27526
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26758
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref27520
type: unificationXref
DB: CapCyc
ID: RXN-707

phys-ent-participant27541
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27539
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27539
type: protein
NAME: STEROL DELTA7 REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27540

unificationXref27540
type: unificationXref
DB: CapCyc
ID: SGNU197414-MONOMER

unificationXref27538
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-178

catalysis27532
type: catalysis
CONTROLLED: biochemicalReaction27519
CONTROLLER: phys-ent-participant27536
NAME: STEROL DELTA7 REDUCTASE
XREF: unificationXref27533

phys-ent-participant27536
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27534
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27534
type: protein
NAME: STEROL DELTA7 REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27535

unificationXref27535
type: unificationXref
DB: CapCyc
ID: SGNU198390-MONOMER

unificationXref27533
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-293

catalysis27527
type: catalysis
CONTROLLED: biochemicalReaction27519
CONTROLLER: phys-ent-participant27531
NAME: STEROL DELTA7 REDUCTASE
XREF: unificationXref27528

phys-ent-participant27531
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27529
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27529
type: protein
NAME: STEROL DELTA7 REDUCTASE
ORGANISM: bioSource20982
XREF: unificationXref27530

unificationXref27530
type: unificationXref
DB: CapCyc
ID: SGNU200880-MONOMER

unificationXref27528
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-453

catalysis27367
type: catalysis
CONTROLLED: biochemicalReaction27359
CONTROLLER: phys-ent-participant27371
NAME: NADH-DEPENDENT GLUTAMATE SYNTHASE
XREF: unificationXref27368

biochemicalReaction27359
type: biochemicalReaction
EC-NUMBER: 1.4.1.14
LEFT: phys-ent-participant27218
LEFT: phys-ent-participant27361
NAME: glutamate synthase (NADH)
RIGHT: phys-ent-participant27230
RIGHT: phys-ent-participant25706
RIGHT: phys-ent-participant21089
SYNONYMS: NADH-dependent glutamate synthase
SYNONYMS: NADH-glutamate synthase
SYNONYMS: L-glutamate synthetase
SYNONYMS: L-glutamate synthase
XREF: unificationXref27360

phys-ent-participant27361
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21090
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule21090
type: smallMolecule
MOLECULAR-WEIGHT: 147.13
NAME: L-glutamate
STRUCTURE: chemicalStructure21094
SYNONYMS: 1-amino-propane-1,3-dicarboxylic acid
SYNONYMS: glutacid
SYNONYMS: glutaminic acid
SYNONYMS: L-glutamic acid
SYNONYMS: α-aminoglutaric acid
SYNONYMS: E
SYNONYMS: glt
SYNONYMS: glu
SYNONYMS: glut
SYNONYMS: glutamate
SYNONYMS: L-glu
SYNONYMS: 2-aminopentanedioic acid
XREF: unificationXref21093
XREF: unificationXref21092
XREF: unificationXref21091

chemicalStructure21094
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLT-atom1" elementType="N" x2="0.0" y2="-2.789"/> <atom id="GLT-atom2" elementType="O" x2="6.0915" y2="-2.0437"/> <atom id="GLT-atom3" elementType="O" x2="0.0302" y2="-0.0101"/> <atom id="GLT-atom4" elementType="O" x2="4.8834" y2="-4.1481"/> <atom id="GLT-atom5" elementType="O" x2="2.4467" y2="0.0"/> <atom id="GLT-atom6" elementType="C" x2="3.6448" y2="-2.0739"/> <atom id="GLT-atom7" elementType="C" x2="2.4467" y2="-2.789"/> <atom id="GLT-atom8" elementType="C" x2="4.8834" y2="-2.7488"/> <atom id="GLT-atom9" elementType="C" x2="1.2383" y2="-0.7148"/> <atom id="GLT-atom10" elementType="C" x2="1.2383" y2="-2.1041"/> <bond id="GLT-bond1" atomRefs="GLT-atom9 GLT-atom10" order="1"/> <bond id="GLT-bond2" atomRefs="GLT-atom10 GLT-atom7" order="1"/> <bond id="GLT-bond3" atomRefs="GLT-atom6 GLT-atom8" order="1"/> <bond id="GLT-bond4" atomRefs="GLT-atom6 GLT-atom7" order="1"/> <bond id="GLT-bond5" atomRefs="GLT-atom5 GLT-atom9" order="1"/> <bond id="GLT-bond6" atomRefs="GLT-atom4 GLT-atom8" order="1"/> <bond id="GLT-bond7" atomRefs="GLT-atom3 GLT-atom9" order="2"/> <bond id="GLT-bond8" atomRefs="GLT-atom2 GLT-atom8" order="2"/> <bond id="GLT-bond9" atomRefs="GLT-atom1 GLT-atom10" order="1"/> <formula concise="C 5 H 9 N 1 O 4" formalCharge="0"/> 147.13 C(=O)(O)CCC(N)C(O)=O

unificationXref21093
type: unificationXref
DB: CapCyc
ID: GLT

unificationXref21092
type: unificationXref
DB: CAS
ID: 56-86-0

unificationXref21091
type: unificationXref
DB: LIGAND
ID: C00025

phys-ent-participant21089
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21084
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21084
type: smallMolecule
MOLECULAR-WEIGHT: 146.146
NAME: L-glutamine
STRUCTURE: chemicalStructure21088
SYNONYMS: Q
SYNONYMS: proglumide
SYNONYMS: glum
SYNONYMS: gln
SYNONYMS: glutamine
SYNONYMS: glumin
SYNONYMS: 2-aminoglutaramic acid
SYNONYMS: glutamic acid 5-amide
XREF: unificationXref21087
XREF: unificationXref21086
XREF: unificationXref21085

chemicalStructure21088
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLN-atom1" elementType="N" x2="7.2639" y2="-2.1111"/> <atom id="GLN-atom2" elementType="N" x2="2.4214" y2="-3.5066"/> <atom id="GLN-atom3" elementType="O" x2="6.0353" y2="0.0"/> <atom id="GLN-atom4" elementType="O" x2="1.2285" y2="0.0"/> <atom id="GLN-atom5" elementType="O" x2="0.0" y2="-2.1111"/> <atom id="GLN-atom6" elementType="C" x2="4.8308" y2="-2.0991"/> <atom id="GLN-atom7" elementType="C" x2="3.6259" y2="-1.4075"/> <atom id="GLN-atom8" elementType="C" x2="6.0353" y2="-1.4075"/> <atom id="GLN-atom9" elementType="C" x2="1.2285" y2="-1.4075"/> <atom id="GLN-atom10" elementType="C" x2="2.4214" y2="-2.0991"/> <bond id="GLN-bond1" atomRefs="GLN-atom9 GLN-atom10" order="1"/> <bond id="GLN-bond2" atomRefs="GLN-atom10 GLN-atom7" order="1"/> <bond id="GLN-bond3" atomRefs="GLN-atom6 GLN-atom8" order="1"/> <bond id="GLN-bond4" atomRefs="GLN-atom6 GLN-atom7" order="1"/> <bond id="GLN-bond5" atomRefs="GLN-atom5 GLN-atom9" order="1"/> <bond id="GLN-bond6" atomRefs="GLN-atom4 GLN-atom9" order="2"/> <bond id="GLN-bond7" atomRefs="GLN-atom3 GLN-atom8" order="2"/> <bond id="GLN-bond8" atomRefs="GLN-atom2 GLN-atom10" order="1"/> <bond id="GLN-bond9" atomRefs="GLN-atom1 GLN-atom8" order="1"/> <formula concise="C 5 H 10 N 2 O 3" formalCharge="0"/> 146.146 C(N)(=O)CCC(N)C(O)=O

unificationXref21087
type: unificationXref
DB: CapCyc
ID: GLN

unificationXref21086
type: unificationXref
DB: CAS
ID: 56-85-9

unificationXref21085
type: unificationXref
DB: LIGAND
ID: C00064

unificationXref27360
type: unificationXref
DB: CapCyc
ID: GLUTAMATE-SYNTHASE-(NADH)-RXN

phys-ent-participant27371
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27369
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27369
type: protein
NAME: NADH-DEPENDENT GLUTAMATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref27370

unificationXref27370
type: unificationXref
DB: CapCyc
ID: SGNU198875-MONOMER

unificationXref27368
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-332

catalysis27362
type: catalysis
CONTROLLED: biochemicalReaction27359
CONTROLLER: phys-ent-participant27366
NAME: NADH-DEPENDENT GLUTAMATE SYNTHASE
XREF: unificationXref27363

phys-ent-participant27366
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27364
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27364
type: protein
NAME: NADH-DEPENDENT GLUTAMATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref27365

unificationXref27365
type: unificationXref
DB: CapCyc
ID: SGNU202850-MONOMER

unificationXref27363
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-585

catalysis27357
type: catalysis
CONTROLLED: biochemicalReaction27353
CONTROLLER: phys-ent-participant27352
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
XREF: unificationXref27358

biochemicalReaction27353
type: biochemicalReaction
EC-NUMBER: 1.4.3.5
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant25495
NAME: Pyridoxamine-phosphate oxidase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant27200
RIGHT: phys-ent-participant25476
SYNONYMS: Pyridoxamine 5'-phosphate oxidase
XREF: unificationXref27354

phys-ent-participant25495
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25490
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25490
type: smallMolecule
MOLECULAR-WEIGHT: 248.175
NAME: pyridoxamine 5'-phosphate
STRUCTURE: chemicalStructure25494
SYNONYMS: pyridoxamine phosphate
XREF: unificationXref25493
XREF: unificationXref25492
XREF: unificationXref25491

chemicalStructure25494
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRIDOXAMINE-5P-atom1" elementType="C" x2="-0.45666665" y2="-0.5566666"/> <atom id="PYRIDOXAMINE-5P-atom2" elementType="C" x2="-0.19333333" y2="-0.40666664"/> <atom id="PYRIDOXAMINE-5P-atom3" elementType="O" x2="0.99666667" y2="-0.59000003"/> <atom id="PYRIDOXAMINE-5P-atom4" elementType="C" x2="-0.45666665" y2="-0.86333334"/> <atom id="PYRIDOXAMINE-5P-atom5" elementType="C" x2="0.06666672" y2="-0.59000003"/> <atom id="PYRIDOXAMINE-5P-atom6" elementType="P" x2="0.6933334" y2="-0.59000003"/> <atom id="PYRIDOXAMINE-5P-atom7" elementType="O" x2="0.6933334" y2="-0.89"/> <atom id="PYRIDOXAMINE-5P-atom8" elementType="N" x2="-0.18666667" y2="-1.0"/> <atom id="PYRIDOXAMINE-5P-atom9" elementType="C" x2="-0.7266667" y2="-0.40666664"/> <atom id="PYRIDOXAMINE-5P-atom10" elementType="C" x2="-0.7266667" y2="-0.093333304"/> <atom id="PYRIDOXAMINE-5P-atom11" elementType="O" x2="0.40333343" y2="-0.59000003"/> <atom id="PYRIDOXAMINE-5P-atom12" elementType="N" x2="-0.45666665" y2="0.060000062"/> <atom id="PYRIDOXAMINE-5P-atom13" elementType="C" x2="-0.19333333" y2="-0.093333304"/> <atom id="PYRIDOXAMINE-5P-atom14" elementType="O" x2="-0.97333336" y2="-0.58"/> <atom id="PYRIDOXAMINE-5P-atom15" elementType="C" x2="-1.0" y2="0.0333333"/> <atom id="PYRIDOXAMINE-5P-atom16" elementType="O" x2="0.6933334" y2="-0.28666663"/> <bond id="PYRIDOXAMINE-5P-bond1" atomRefs="PYRIDOXAMINE-5P-atom16 PYRIDOXAMINE-5P-atom6" order="2"/> <bond id="PYRIDOXAMINE-5P-bond2" atomRefs="PYRIDOXAMINE-5P-atom15 PYRIDOXAMINE-5P-atom10" order="1"/> <bond id="PYRIDOXAMINE-5P-bond3" atomRefs="PYRIDOXAMINE-5P-atom14 PYRIDOXAMINE-5P-atom9" order="1"/> <bond id="PYRIDOXAMINE-5P-bond4" atomRefs="PYRIDOXAMINE-5P-atom13 PYRIDOXAMINE-5P-atom2" order="A"/> <bond id="PYRIDOXAMINE-5P-bond5" atomRefs="PYRIDOXAMINE-5P-atom12 PYRIDOXAMINE-5P-atom13" order="A"/> <bond id="PYRIDOXAMINE-5P-bond6" atomRefs="PYRIDOXAMINE-5P-atom11 PYRIDOXAMINE-5P-atom6" order="1"/> <bond id="PYRIDOXAMINE-5P-bond7" atomRefs="PYRIDOXAMINE-5P-atom…

unificationXref25493
type: unificationXref
DB: CapCyc
ID: PYRIDOXAMINE-5P

unificationXref25492
type: unificationXref
DB: LIGAND
ID: C00647

unificationXref25491
type: unificationXref
DB: CAS
ID: 529-96-4

phys-ent-participant25476
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25471
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25471
type: smallMolecule
MOLECULAR-WEIGHT: 247.144
NAME: pyridoxal 5'-phosphate
STRUCTURE: chemicalStructure25475
SYNONYMS: PLP
SYNONYMS: pyridoxal phosphate
SYNONYMS: pyridoxal-5P
SYNONYMS: pyridoxal 5-phosphate
SYNONYMS: pyridoxal-P
XREF: unificationXref25474
XREF: unificationXref25473
XREF: unificationXref25472

chemicalStructure25475
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRIDOXAL_PHOSPHATE-atom1" elementType="C" x2="-0.19212" y2="-0.0936"/> <atom id="PYRIDOXAL_PHOSPHATE-atom2" elementType="O" x2="0.69458" y2="-0.28736"/> <atom id="PYRIDOXAL_PHOSPHATE-atom3" elementType="O" x2="0.99672" y2="-0.58949"/> <atom id="PYRIDOXAL_PHOSPHATE-atom4" elementType="P" x2="0.69458" y2="-0.58949"/> <atom id="PYRIDOXAL_PHOSPHATE-atom5" elementType="C" x2="-0.72742" y2="-0.0936"/> <atom id="PYRIDOXAL_PHOSPHATE-atom6" elementType="N" x2="-0.45813" y2="0.06076"/> <atom id="PYRIDOXAL_PHOSPHATE-atom7" elementType="C" x2="-0.45813" y2="-0.55665"/> <atom id="PYRIDOXAL_PHOSPHATE-atom8" elementType="C" x2="0.06732" y2="-0.58949"/> <atom id="PYRIDOXAL_PHOSPHATE-atom9" elementType="O" x2="-0.18555" y2="-1.0"/> <atom id="PYRIDOXAL_PHOSPHATE-atom10" elementType="O" x2="0.4023" y2="-0.58949"/> <atom id="PYRIDOXAL_PHOSPHATE-atom11" elementType="C" x2="-0.72742" y2="-0.40558"/> <atom id="PYRIDOXAL_PHOSPHATE-atom12" elementType="O" x2="0.69458" y2="-0.89163"/> <atom id="PYRIDOXAL_PHOSPHATE-atom13" elementType="C" x2="-0.45813" y2="-0.86207"/> <atom id="PYRIDOXAL_PHOSPHATE-atom14" elementType="C" x2="-0.19212" y2="-0.40558"/> <atom id="PYRIDOXAL_PHOSPHATE-atom15" elementType="C" x2="-1.0" y2="0.03448"/> <atom id="PYRIDOXAL_PHOSPHATE-atom16" elementType="O" x2="-0.97373" y2="-0.57964"/> <bond id="PYRIDOXAL_PHOSPHATE-bond1" atomRefs="PYRIDOXAL_PHOSPHATE-atom16 PYRIDOXAL_PHOSPHATE-atom11" order="1"/> <bond id="PYRIDOXAL_PHOSPHATE-bond2" atomRefs="PYRIDOXAL_PHOSPHATE-atom15 PYRIDOXAL_PHOSPHATE-atom5" order="1"/> <bond id="PYRIDOXAL_PHOSPHATE-bond3" atomRefs="PYRIDOXAL_PHOSPHATE-atom14 PYRIDOXAL_PHOSPHATE-atom8" order="1"/> <bond id="PYRIDOXAL_PHOSPHATE-bond4" atomRefs="PYRIDOXAL_PHOSPHATE-atom13 PYRIDOXAL_PHOSPHATE-atom7" order="1"/> <bond id="PYRIDOXAL_PHOSPHATE-bond5" atomRefs="PYRIDOXAL_PHOSPHATE-atom12 PYRIDOXAL_PHOSPHATE-atom4" order="1"/> <bond id="PYRIDOXAL_PHOSPHATE-bond6" atomRefs="PYRIDOXAL_PHOSPHATE-atom11 PYRIDOXAL_PHOSPHATE-atom5" order="A"/> <bond…

unificationXref25474
type: unificationXref
DB: CapCyc
ID: PYRIDOXAL_PHOSPHATE

unificationXref25473
type: unificationXref
DB: CAS
ID: 54-47-7

unificationXref25472
type: unificationXref
DB: LIGAND
ID: C00018

unificationXref27354
type: unificationXref
DB: CapCyc
ID: PMPOXI-RXN

phys-ent-participant27352
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27350
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27350
type: protein
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
ORGANISM: bioSource20982
XREF: unificationXref27351

unificationXref27351
type: unificationXref
DB: CapCyc
ID: SGNU199641-MONOMER

unificationXref27358
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-363

catalysis27355
type: catalysis
CONTROLLED: biochemicalReaction27353
CONTROLLER: phys-ent-participant27347
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
XREF: unificationXref27356

phys-ent-participant27347
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27345
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27345
type: protein
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
ORGANISM: bioSource20982
XREF: unificationXref27346

unificationXref27346
type: unificationXref
DB: CapCyc
ID: SGNU203670-MONOMER

unificationXref27356
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-631

catalysis27348
type: catalysis
CONTROLLED: biochemicalReaction27341
CONTROLLER: phys-ent-participant27352
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
XREF: unificationXref27349

biochemicalReaction27341
type: biochemicalReaction
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant25509
NAME: PNPOXI-RXN
RIGHT: phys-ent-participant27200
RIGHT: phys-ent-participant25476
SYNONYMS: PYRIDOXINE-5-PRIME-PHOSPHATE OXIDASE
XREF: unificationXref27342

phys-ent-participant25509
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25504
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25504
type: smallMolecule
MOLECULAR-WEIGHT: 249.16
NAME: pyridoxine-5'-phosphate
STRUCTURE: chemicalStructure25508
SYNONYMS: pyridoxine-phosphate
SYNONYMS: pyridoxine-5P
SYNONYMS: pyridoxine-P
XREF: unificationXref25507
XREF: unificationXref25506
XREF: unificationXref25505

chemicalStructure25508
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRIDOXINE-5P-atom1" elementType="O" x2="0.40377355" y2="-0.58867925"/> <atom id="PYRIDOXINE-5P-atom2" elementType="O" x2="0.69433963" y2="-0.89056605"/> <atom id="PYRIDOXINE-5P-atom3" elementType="C" x2="-0.19245279" y2="-0.40377355"/> <atom id="PYRIDOXINE-5P-atom4" elementType="O" x2="-0.9735849" y2="-0.58113205"/> <atom id="PYRIDOXINE-5P-atom5" elementType="C" x2="-0.19245279" y2="-0.09433961"/> <atom id="PYRIDOXINE-5P-atom6" elementType="O" x2="0.69433963" y2="-0.28679246"/> <atom id="PYRIDOXINE-5P-atom7" elementType="O" x2="0.99622643" y2="-0.58867925"/> <atom id="PYRIDOXINE-5P-atom8" elementType="P" x2="0.69433963" y2="-0.58867925"/> <atom id="PYRIDOXINE-5P-atom9" elementType="C" x2="-0.7283019" y2="-0.09433961"/> <atom id="PYRIDOXINE-5P-atom10" elementType="N" x2="-0.45660377" y2="0.06037736"/> <atom id="PYRIDOXINE-5P-atom11" elementType="C" x2="-0.45660377" y2="-0.5584906"/> <atom id="PYRIDOXINE-5P-atom12" elementType="C" x2="0.0679245" y2="-0.58867925"/> <atom id="PYRIDOXINE-5P-atom13" elementType="O" x2="-0.18490565" y2="-1.0"/> <atom id="PYRIDOXINE-5P-atom14" elementType="C" x2="-0.7283019" y2="-0.40377355"/> <atom id="PYRIDOXINE-5P-atom15" elementType="C" x2="-0.45660377" y2="-0.8603774"/> <atom id="PYRIDOXINE-5P-atom16" elementType="C" x2="-1.0" y2="0.03396225"/> <bond id="PYRIDOXINE-5P-bond1" atomRefs="PYRIDOXINE-5P-atom16 PYRIDOXINE-5P-atom9" order="1"/> <bond id="PYRIDOXINE-5P-bond2" atomRefs="PYRIDOXINE-5P-atom15 PYRIDOXINE-5P-atom11" order="1"/> <bond id="PYRIDOXINE-5P-bond3" atomRefs="PYRIDOXINE-5P-atom14 PYRIDOXINE-5P-atom9" order="A"/> <bond id="PYRIDOXINE-5P-bond4" atomRefs="PYRIDOXINE-5P-atom13 PYRIDOXINE-5P-atom15" order="1"/> <bond id="PYRIDOXINE-5P-bond5" atomRefs="PYRIDOXINE-5P-atom12 PYRIDOXINE-5P-atom1" order="1"/> <bond id="PYRIDOXINE-5P-bond6" atomRefs="PYRIDOXINE-5P-atom11 PYRIDOXINE-5P-atom14" order="A"/> <bond id="PYRIDOXINE-5P-bond7" atomRefs="PYRIDOXINE-5P-atom10 PYRIDOXINE-5P-atom5" order="A"/> <bond id="PYRIDOXINE-5P-b…

unificationXref25507
type: unificationXref
DB: CapCyc
ID: PYRIDOXINE-5P

unificationXref25506
type: unificationXref
DB: LIGAND
ID: C00627

unificationXref25505
type: unificationXref
DB: CAS
ID: 447-05-2

unificationXref27342
type: unificationXref
DB: CapCyc
ID: PNPOXI-RXN

unificationXref27349
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-364

catalysis27343
type: catalysis
CONTROLLED: biochemicalReaction27341
CONTROLLER: phys-ent-participant27347
NAME: PYRIDOXAMINE 5-PHOSPHATE OXIDASE
XREF: unificationXref27344

unificationXref27344
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-632

catalysis27305
type: catalysis
CONTROLLED: biochemicalReaction27301
CONTROLLER: phys-ent-participant27300
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref27306

biochemicalReaction27301
type: biochemicalReaction
EC-NUMBER: 1.5.99.8
LEFT: phys-ent-participant27272
LEFT: phys-ent-participant27179
NAME: RXN-7181
RIGHT: phys-ent-participant27284
RIGHT: phys-ent-participant27182
XREF: unificationXref27302

phys-ent-participant27272
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27267
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27267
type: smallMolecule
MOLECULAR-WEIGHT: 115.132
NAME: L-proline
STRUCTURE: chemicalStructure27271
SYNONYMS: 2-pyrrolidinecarboxylic acid
SYNONYMS: P
SYNONYMS: proline
SYNONYMS: prol
SYNONYMS: pro
XREF: unificationXref27270
XREF: unificationXref27269
XREF: unificationXref27268

chemicalStructure27271
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PRO-atom1" elementType="C" x2="-0.805" y2="0.3399999"/> <atom id="PRO-atom2" elementType="H" x2="0.20249999" y2="0.037500024"/> <atom id="PRO-atom3" elementType="C" x2="0.5425" y2="-0.41750002"/> <atom id="PRO-atom4" elementType="C" x2="-1.0" y2="-0.2425"/> <atom id="PRO-atom5" elementType="O" x2="0.99749994" y2="-0.027500033"/> <atom id="PRO-atom6" elementType="N" x2="-0.51" y2="-0.5925"/> <atom id="PRO-atom7" elementType="C" x2="-0.21500003" y2="0.3399999"/> <atom id="PRO-atom8" elementType="C" x2="-0.027500033" y2="-0.24000001"/> <atom id="PRO-atom9" elementType="O" x2="0.6775" y2="-1.0"/> <bond id="PRO-bond1" atomRefs="PRO-atom9 PRO-atom3" order="1"/> <bond id="PRO-bond2" atomRefs="PRO-atom8 PRO-atom3" order="1"/> <bond id="PRO-bond3" atomRefs="PRO-atom8 PRO-atom2" order="1"/> <bond id="PRO-bond4" atomRefs="PRO-atom7 PRO-atom8" order="1"/> <bond id="PRO-bond5" atomRefs="PRO-atom6 PRO-atom8" order="1"/> <bond id="PRO-bond6" atomRefs="PRO-atom5 PRO-atom3" order="2"/> <bond id="PRO-bond7" atomRefs="PRO-atom4 PRO-atom6" order="1"/> <bond id="PRO-bond8" atomRefs="PRO-atom1 PRO-atom7" order="1"/> <bond id="PRO-bond9" atomRefs="PRO-atom1 PRO-atom4" order="1"/> <formula concise="C 5 H 9 N 1 O 2" formalCharge="0"/> 115.132 C(=O)(O)[CH]1(CCCN1)

unificationXref27270
type: unificationXref
DB: CapCyc
ID: PRO

unificationXref27269
type: unificationXref
DB: CAS
ID: 147-85-3

unificationXref27268
type: unificationXref
DB: LIGAND
ID: C00148

phys-ent-participant27284
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27279
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27279
type: smallMolecule
COMMENT: Pyrroline 5-carboxylate is an enamine that forms on spontaneous dehydration of |FRAME:L-GLUTAMATE_GAMMA-SEMIALDEHYDE| in aqueous solutions. It can be converted to or be formed from the three amino acids |FRAME:GLT| (EC 1.5.1.12), |FRAME:L-ORNITHINE| (EC 2.6.1.13) and |FRAME:PRO| (EC 1.5.99.8 and EC 1.5.1.2). It is also one of the few metabolites that can be a precursor to other metabolites of both the |FRAME:PWY-4984| and the |FRAME:TCA|.
MOLECULAR-WEIGHT: 113.116
NAME: pyrroline 5-carboxylate
STRUCTURE: chemicalStructure27283
SYNONYMS: L-Δ1-pyrroline-5-carboxylate
SYNONYMS: (S)-1-pyrroline-5-carboxylate
SYNONYMS: 1-pyrroline-5-carboxylate
SYNONYMS: L-1-pyrroline-5-carboxylate
SYNONYMS: δ-1-pyrroline-5-carboxylic acid
SYNONYMS: δ-1-pyrroline-5-carboxylate
XREF: unificationXref27282
XREF: unificationXref27281
XREF: unificationXref27280

chemicalStructure27283
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="l-delta(1)-pyrroline_5-carboxylate-atom1" elementType="O" x2="4.5937" y2="-0.7337"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom2" elementType="O" x2="3.4855" y2="-2.9886"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom3" elementType="C" x2="0.0" y2="-1.1236"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom4" elementType="C" x2="0.0" y2="0.0"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom5" elementType="C" x2="2.1631" y2="0.0"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom6" elementType="N" x2="1.0855" y2="-1.8343"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom7" elementType="C" x2="3.4855" y2="-1.5898"/> <atom id="l-delta(1)-pyrroline_5-carboxylate-atom8" elementType="C" x2="2.1631" y2="-1.1236"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond1" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom7 l-delta(1)-pyrroline_5-carboxylate-atom8" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond2" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom8 l-delta(1)-pyrroline_5-carboxylate-atom6" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond3" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom5 l-delta(1)-pyrroline_5-carboxylate-atom8" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond4" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom4 l-delta(1)-pyrroline_5-carboxylate-atom5" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond5" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom3 l-delta(1)-pyrroline_5-carboxylate-atom6" order="2"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond6" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom3 l-delta(1)-pyrroline_5-carboxylate-atom4" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond7" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom2 l-delta(1)-pyrroline_5-carboxylate-atom7" order="1"/> <bond id="l-delta(1)-pyrroline_5-carboxylate-bond8" atomRefs="l-delta(1)-pyrroline_5-carboxylate-atom1 l-delta(1)-pyrroline_5-carboxylate-atom7" order="2"/…

unificationXref27282
type: unificationXref
DB: CapCyc
ID: l-delta(1)-pyrroline_5-carboxylate

unificationXref27281
type: unificationXref
DB: CAS
ID: 2906-39-0

unificationXref27280
type: unificationXref
DB: LIGAND
ID: C03912

unificationXref27302
type: unificationXref
DB: CapCyc
ID: RXN-7181

unificationXref27306
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-146

catalysis27303
type: catalysis
CONTROLLED: biochemicalReaction27301
CONTROLLER: phys-ent-participant27295
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref27304

unificationXref27304
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-226

catalysis27296
type: catalysis
CONTROLLED: biochemicalReaction27265
CONTROLLER: phys-ent-participant27300
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref27297

biochemicalReaction27265
type: biochemicalReaction
EC-NUMBER: 1.5.99.8
LEFT: phys-ent-participant27272
LEFT: phys-ent-participant27278
NAME: Proline dehydrogenase
RIGHT: phys-ent-participant27284
RIGHT: phys-ent-participant27290
XREF: unificationXref27266

unificationXref27266
type: unificationXref
DB: CapCyc
ID: RXN-821

unificationXref27297
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-147

catalysis27291
type: catalysis
CONTROLLED: biochemicalReaction27265
CONTROLLER: phys-ent-participant27295
NAME: PROLINE DEHYDROGENASE
XREF: unificationXref27292

unificationXref27292
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-227

catalysis27261
type: catalysis
CONTROLLED: biochemicalReaction27259
CONTROLLER: phys-ent-participant27258
NAME: URICASE
XREF: unificationXref27262

biochemicalReaction27259
type: biochemicalReaction
EC-NUMBER: 1.7.3.3
LEFT: phys-ent-participant27253
LEFT: phys-ent-participant23342
NAME: RXN-7610
RIGHT: phys-ent-participant23894
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant27200
XREF: unificationXref27260

phys-ent-participant27253
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27248
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27248
type: smallMolecule
MOLECULAR-WEIGHT: 167.104
NAME: urate
STRUCTURE: chemicalStructure27252
SYNONYMS: 8-hydroxyxanthine
SYNONYMS: 2,6,8-trihydroxypurine
SYNONYMS: trioxopurine
SYNONYMS: 2,6,8-trioxypurine
SYNONYMS: purine-2,6,8-(1H,3H,9H)-trione
SYNONYMS: uric acid
XREF: unificationXref27251
XREF: unificationXref27250
XREF: unificationXref27249

chemicalStructure27252
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="URATE-atom1" elementType="H" x2="0.0945" y2="-2.6727"/> <atom id="URATE-atom2" elementType="H" x2="7.025" y2="-0.0203"/> <atom id="URATE-atom3" elementType="H" x2="4.8533" y2="-4.0374"/> <atom id="URATE-atom4" elementType="O" x2="2.4673" y2="-4.2005"/> <atom id="URATE-atom5" elementType="O" x2="7.1267" y2="-2.5794"/> <atom id="URATE-atom6" elementType="O" x2="0.0" y2="-0.4281" formalCharge="-1"/> <atom id="URATE-atom7" elementType="N" x2="2.4673" y2="0.0"/> <atom id="URATE-atom8" elementType="C" x2="1.2644" y2="-0.7951"/> <atom id="URATE-atom9" elementType="C" x2="2.4673" y2="-2.8751"/> <atom id="URATE-atom10" elementType="C" x2="5.9238" y2="-2.0594"/> <atom id="URATE-atom11" elementType="C" x2="3.7216" y2="-0.7951"/> <atom id="URATE-atom12" elementType="C" x2="3.7216" y2="-1.9473"/> <atom id="URATE-atom13" elementType="N" x2="1.2644" y2="-2.0594"/> <atom id="URATE-atom14" elementType="N" x2="5.9238" y2="-0.7951"/> <atom id="URATE-atom15" elementType="N" x2="4.8637" y2="-2.8037"/> <bond id="URATE-bond1" atomRefs="URATE-atom12 URATE-atom15" order="A"/> <bond id="URATE-bond2" atomRefs="URATE-atom14 URATE-atom11" order="A"/> <bond id="URATE-bond3" atomRefs="URATE-atom11 URATE-atom12" order="A"/> <bond id="URATE-bond4" atomRefs="URATE-atom15 URATE-atom10" order="A"/> <bond id="URATE-bond5" atomRefs="URATE-atom10 URATE-atom14" order="A"/> <bond id="URATE-bond6" atomRefs="URATE-atom13 URATE-atom9" order="A"/> <bond id="URATE-bond7" atomRefs="URATE-atom9 URATE-atom12" order="A"/> <bond id="URATE-bond8" atomRefs="URATE-atom8 URATE-atom13" order="A"/> <bond id="URATE-bond9" atomRefs="URATE-atom11 URATE-atom7" order="A"/> <bond id="URATE-bond10" atomRefs="URATE-atom7 URATE-atom8" order="A"/> <bond id="URATE-bond11" atomRefs="URATE-atom6 URATE-atom8" order="1"/> <bond id="URATE-bond12" atomRefs="URATE-atom5 URATE-atom10" order="2"/> <bond id="URATE-bond13" atomRefs="URATE-atom4 URATE-atom9" order="2"/> <bond id="URATE-bond14" atomRefs="URATE-atom3 URATE-atom15" order…

unificationXref27251
type: unificationXref
DB: CapCyc
ID: URATE

unificationXref27250
type: unificationXref
DB: CAS
ID: 69-93-2

unificationXref27249
type: unificationXref
DB: LIGAND
ID: C00366

phys-ent-participant23894
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23889
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23889
type: smallMolecule
MOLECULAR-WEIGHT: 158.116
NAME: allantoin
STRUCTURE: chemicalStructure23893
XREF: unificationXref23892
XREF: unificationXref23891
XREF: unificationXref23890

chemicalStructure23893
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ALLANTOIN-atom1" elementType="O" x2="0.99674" y2="-0.16938"/> <atom id="ALLANTOIN-atom2" elementType="O" x2="-0.29967" y2="-1.0"/> <atom id="ALLANTOIN-atom3" elementType="N" x2="0.66775" y2="-0.76547"/> <atom id="ALLANTOIN-atom4" elementType="N" x2="-0.28339" y2="-0.19544"/> <atom id="ALLANTOIN-atom5" elementType="C" x2="0.02606" y2="-0.40391"/> <atom id="ALLANTOIN-atom6" elementType="N" x2="0.35179" y2="-0.1759"/> <atom id="ALLANTOIN-atom7" elementType="O" x2="-0.64169" y2="-0.78827"/> <atom id="ALLANTOIN-atom8" elementType="C" x2="-0.64169" y2="-0.38436"/> <atom id="ALLANTOIN-atom9" elementType="C" x2="0.66775" y2="-0.40391"/> <atom id="ALLANTOIN-atom10" elementType="N" x2="-1.0" y2="-0.20195"/> <atom id="ALLANTOIN-atom11" elementType="C" x2="0.02606" y2="-0.76547"/> <bond id="ALLANTOIN-bond1" atomRefs="ALLANTOIN-atom11 ALLANTOIN-atom3" order="1"/> <bond id="ALLANTOIN-bond2" atomRefs="ALLANTOIN-atom10 ALLANTOIN-atom8" order="1"/> <bond id="ALLANTOIN-bond3" atomRefs="ALLANTOIN-atom9 ALLANTOIN-atom3" order="1"/> <bond id="ALLANTOIN-bond4" atomRefs="ALLANTOIN-atom8 ALLANTOIN-atom4" order="1"/> <bond id="ALLANTOIN-bond5" atomRefs="ALLANTOIN-atom7 ALLANTOIN-atom8" order="2"/> <bond id="ALLANTOIN-bond6" atomRefs="ALLANTOIN-atom6 ALLANTOIN-atom9" order="1"/> <bond id="ALLANTOIN-bond7" atomRefs="ALLANTOIN-atom5 ALLANTOIN-atom6" order="1"/> <bond id="ALLANTOIN-bond8" atomRefs="ALLANTOIN-atom5 ALLANTOIN-atom11" order="1"/> <bond id="ALLANTOIN-bond9" atomRefs="ALLANTOIN-atom4 ALLANTOIN-atom5" order="1"/> <bond id="ALLANTOIN-bond10" atomRefs="ALLANTOIN-atom2 ALLANTOIN-atom11" order="2"/> <bond id="ALLANTOIN-bond11" atomRefs="ALLANTOIN-atom1 ALLANTOIN-atom9" order="2"/> <formula concise="C 4 H 6 N 4 O 3" formalCharge="0"/> 158.116 C1(NC(N)=O)(C(=O)NC(N1)=O)

unificationXref23892
type: unificationXref
DB: CapCyc
ID: ALLANTOIN

unificationXref23891
type: unificationXref
DB: CAS
ID: 97-59-6

unificationXref23890
type: unificationXref
DB: LIGAND
ID: C01551

unificationXref27260
type: unificationXref
DB: CapCyc
ID: RXN-7610

phys-ent-participant27258
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27256
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27256
type: protein
NAME: URICASE
ORGANISM: bioSource20982
XREF: unificationXref27257

unificationXref27257
type: unificationXref
DB: CapCyc
ID: SGNU200286-MONOMER

unificationXref27262
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-413

catalysis27254
type: catalysis
CONTROLLED: biochemicalReaction27246
CONTROLLER: phys-ent-participant27258
NAME: URICASE
XREF: unificationXref27255

biochemicalReaction27246
type: biochemicalReaction
EC-NUMBER: 1.7.3.3
LEFT: phys-ent-participant27253
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant20951
NAME: Urate oxidase
RIGHT: phys-ent-participant23916
RIGHT: phys-ent-participant27200
SYNONYMS: Uricase
XREF: unificationXref27247

phys-ent-participant23916
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23913
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23913
type: smallMolecule
MOLECULAR-WEIGHT: 183.103
NAME: 5-hydroxyisourate
STRUCTURE: chemicalStructure23915
XREF: unificationXref23914

chemicalStructure23915
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="5-HYDROXYISOURATE-atom1" elementType="H" x2="0.8051" y2="-2.1341"/> <atom id="5-HYDROXYISOURATE-atom2" elementType="C" x2="1.476" y2="-0.8945"/> <atom id="5-HYDROXYISOURATE-atom3" elementType="C" x2="0.0959" y2="-0.1022"/> <atom id="5-HYDROXYISOURATE-atom4" elementType="N" x2="-0.6901" y2="0.396"/> <atom id="5-HYDROXYISOURATE-atom5" elementType="O" x2="-0.6901" y2="-2.2363"/> <atom id="5-HYDROXYISOURATE-atom6" elementType="N" x2="0.8116" y2="-1.361"/> <atom id="5-HYDROXYISOURATE-atom7" elementType="C" x2="-0.6901" y2="-1.4057"/> <atom id="5-HYDROXYISOURATE-atom8" elementType="H" x2="-2.1021" y2="-1.2396"/> <atom id="5-HYDROXYISOURATE-atom9" elementType="C" x2="-1.444" y2="-0.1022"/> <atom id="5-HYDROXYISOURATE-atom10" elementType="O" x2="-2.2363" y2="0.1277"/> <atom id="5-HYDROXYISOURATE-atom11" elementType="N" x2="-1.444" y2="-0.8945"/> <atom id="5-HYDROXYISOURATE-atom12" elementType="O" x2="2.2298" y2="-1.2204" formalCharge="-1"/> <atom id="5-HYDROXYISOURATE-atom13" elementType="N" x2="1.476" y2="-0.1022"/> <atom id="5-HYDROXYISOURATE-atom14" elementType="C" x2="0.0959" y2="-0.8243"/> <atom id="5-HYDROXYISOURATE-atom15" elementType="O" x2="0.0959" y2="-1.6493"/> <bond id="5-HYDROXYISOURATE-bond1" atomRefs="5-HYDROXYISOURATE-atom14 5-HYDROXYISOURATE-atom15" order="1"/> <bond id="5-HYDROXYISOURATE-bond2" atomRefs="5-HYDROXYISOURATE-atom1 5-HYDROXYISOURATE-atom6" order="1"/> <bond id="5-HYDROXYISOURATE-bond3" atomRefs="5-HYDROXYISOURATE-atom2 5-HYDROXYISOURATE-atom13" order="2"/> <bond id="5-HYDROXYISOURATE-bond4" atomRefs="5-HYDROXYISOURATE-atom3 5-HYDROXYISOURATE-atom14" order="1"/> <bond id="5-HYDROXYISOURATE-bond5" atomRefs="5-HYDROXYISOURATE-atom4 5-HYDROXYISOURATE-atom3" order="2"/> <bond id="5-HYDROXYISOURATE-bond6" atomRefs="5-HYDROXYISOURATE-atom5 5-HYDROXYISOURATE-atom7" order="2"/> <bond id="5-HYDROXYISOURATE-bond7" atomRefs="5-HYDROXYISOURATE-atom6 5-HYDROXYISOURATE-atom2" order="1"/> <bond id="5-HYDROXYISOURATE-bond8" atomRefs="5-HYDROXYISOURAT…

unificationXref23914
type: unificationXref
DB: CapCyc
ID: 5-HYDROXYISOURATE

unificationXref27247
type: unificationXref
DB: CapCyc
ID: URATE-OXIDASE-RXN

unificationXref27255
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-414

catalysis27241
type: catalysis
CONTROLLED: biochemicalReaction27206
CONTROLLER: phys-ent-participant27245
NAME: LIPOAMIDE DEHYDROGENASE
XREF: unificationXref27242

biochemicalReaction27206
type: biochemicalReaction
EC-NUMBER: 1.8.1.4
LEFT: phys-ent-participant27212
LEFT: phys-ent-participant27218
NAME: Dihydrolipoamide dehydrogenase
RIGHT: phys-ent-participant27224
RIGHT: phys-ent-participant27230
SYNONYMS: Diaphorase
SYNONYMS: Dihydrolipoyl dehydrogenase
SYNONYMS: Lipoyl dehydrogenase
SYNONYMS: E3 component of α-ketoacid dehydrogenase complexes
SYNONYMS: Lipoamide reductase (NADH)
XREF: unificationXref27207

phys-ent-participant27212
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27208
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27208
type: smallMolecule
MOLECULAR-WEIGHT: 207.348
NAME: dihydrolipoamide
STRUCTURE: chemicalStructure27211
XREF: unificationXref27210
XREF: unificationXref27209

chemicalStructure27211
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DIHYDROLIPOAMIDE-atom1" elementType="H" x2="2.8311" y2="0.0"/> <atom id="DIHYDROLIPOAMIDE-atom2" elementType="N" x2="9.4019" y2="-2.7599"/> <atom id="DIHYDROLIPOAMIDE-atom3" elementType="O" x2="8.638" y2="-0.4671"/> <atom id="DIHYDROLIPOAMIDE-atom4" elementType="S" x2="0.4267" y2="-2.6177"/> <atom id="DIHYDROLIPOAMIDE-atom5" elementType="S" x2="1.8486" y2="-2.6177"/> <atom id="DIHYDROLIPOAMIDE-atom6" elementType="C" x2="0.0" y2="-1.2848"/> <atom id="DIHYDROLIPOAMIDE-atom7" elementType="C" x2="5.9717" y2="-1.338"/> <atom id="DIHYDROLIPOAMIDE-atom8" elementType="C" x2="4.6388" y2="-1.7826"/> <atom id="DIHYDROLIPOAMIDE-atom9" elementType="C" x2="7.0206" y2="-2.2621"/> <atom id="DIHYDROLIPOAMIDE-atom10" elementType="C" x2="1.1374" y2="-0.4671"/> <atom id="DIHYDROLIPOAMIDE-atom11" elementType="C" x2="3.6078" y2="-0.8406"/> <atom id="DIHYDROLIPOAMIDE-atom12" elementType="C" x2="8.3535" y2="-1.8358"/> <atom id="DIHYDROLIPOAMIDE-atom13" elementType="C" x2="2.2749" y2="-1.2848"/> <bond id="DIHYDROLIPOAMIDE-bond1" atomRefs="DIHYDROLIPOAMIDE-atom13 DIHYDROLIPOAMIDE-atom11" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond2" atomRefs="DIHYDROLIPOAMIDE-atom10 DIHYDROLIPOAMIDE-atom13" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond3" atomRefs="DIHYDROLIPOAMIDE-atom9 DIHYDROLIPOAMIDE-atom12" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond4" atomRefs="DIHYDROLIPOAMIDE-atom8 DIHYDROLIPOAMIDE-atom11" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond5" atomRefs="DIHYDROLIPOAMIDE-atom7 DIHYDROLIPOAMIDE-atom9" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond6" atomRefs="DIHYDROLIPOAMIDE-atom7 DIHYDROLIPOAMIDE-atom8" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond7" atomRefs="DIHYDROLIPOAMIDE-atom6 DIHYDROLIPOAMIDE-atom10" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond8" atomRefs="DIHYDROLIPOAMIDE-atom5 DIHYDROLIPOAMIDE-atom13" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond9" atomRefs="DIHYDROLIPOAMIDE-atom4 DIHYDROLIPOAMIDE-atom6" order="1"/> <bond id="DIHYDROLIPOAMIDE-bond10" atomRefs="DIHYDROLIPOAMIDE-atom3 D…

unificationXref27210
type: unificationXref
DB: CapCyc
ID: DIHYDROLIPOAMIDE

unificationXref27209
type: unificationXref
DB: LIGAND
ID: C00579

phys-ent-participant27224
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27219
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27219
type: smallMolecule
MOLECULAR-WEIGHT: 205.333
NAME: lipoamide
STRUCTURE: chemicalStructure27223
SYNONYMS: 5-(1,2-dithiolan-3-yl)-pentanamide
SYNONYMS: DL-lipoamide
XREF: unificationXref27222
XREF: unificationXref27221
XREF: unificationXref27220

chemicalStructure27223
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LIPOAMIDE-atom1" elementType="H" x2="2.4567" y2="0.0"/> <atom id="LIPOAMIDE-atom2" elementType="N" x2="9.3815" y2="-2.8648"/> <atom id="LIPOAMIDE-atom3" elementType="O" x2="8.6219" y2="-0.5636"/> <atom id="LIPOAMIDE-atom4" elementType="C" x2="5.9648" y2="-1.4407"/> <atom id="LIPOAMIDE-atom5" elementType="C" x2="4.6363" y2="-1.8793"/> <atom id="LIPOAMIDE-atom6" elementType="C" x2="0.0" y2="-1.3866"/> <atom id="LIPOAMIDE-atom7" elementType="C" x2="7.0089" y2="-2.3721"/> <atom id="LIPOAMIDE-atom8" elementType="C" x2="3.5922" y2="-0.9481"/> <atom id="LIPOAMIDE-atom9" elementType="C" x2="1.1239" y2="-0.572"/> <atom id="LIPOAMIDE-atom10" elementType="S" x2="0.4244" y2="-2.725"/> <atom id="LIPOAMIDE-atom11" elementType="S" x2="1.8313" y2="-2.725"/> <atom id="LIPOAMIDE-atom12" elementType="C" x2="8.3374" y2="-1.9334"/> <atom id="LIPOAMIDE-atom13" elementType="C" x2="2.2637" y2="-1.3866"/> <bond id="LIPOAMIDE-bond1" atomRefs="LIPOAMIDE-atom11 LIPOAMIDE-atom13" order="1"/> <bond id="LIPOAMIDE-bond2" atomRefs="LIPOAMIDE-atom10 LIPOAMIDE-atom11" order="1"/> <bond id="LIPOAMIDE-bond3" atomRefs="LIPOAMIDE-atom9 LIPOAMIDE-atom13" order="1"/> <bond id="LIPOAMIDE-bond4" atomRefs="LIPOAMIDE-atom13 LIPOAMIDE-atom8" order="1"/> <bond id="LIPOAMIDE-bond5" atomRefs="LIPOAMIDE-atom7 LIPOAMIDE-atom12" order="1"/> <bond id="LIPOAMIDE-bond6" atomRefs="LIPOAMIDE-atom6 LIPOAMIDE-atom10" order="1"/> <bond id="LIPOAMIDE-bond7" atomRefs="LIPOAMIDE-atom6 LIPOAMIDE-atom9" order="1"/> <bond id="LIPOAMIDE-bond8" atomRefs="LIPOAMIDE-atom5 LIPOAMIDE-atom8" order="1"/> <bond id="LIPOAMIDE-bond9" atomRefs="LIPOAMIDE-atom4 LIPOAMIDE-atom7" order="1"/> <bond id="LIPOAMIDE-bond10" atomRefs="LIPOAMIDE-atom4 LIPOAMIDE-atom5" order="1"/> <bond id="LIPOAMIDE-bond11" atomRefs="LIPOAMIDE-atom3 LIPOAMIDE-atom12" order="2"/> <bond id="LIPOAMIDE-bond12" atomRefs="LIPOAMIDE-atom2 LIPOAMIDE-atom12" order="1"/> <bond id="LIPOAMIDE-bond13" atomRefs="LIPOAMIDE-atom13 LIPOAMIDE-atom1" order="1"/> <formula concis…

unificationXref27222
type: unificationXref
DB: CapCyc
ID: LIPOAMIDE

unificationXref27221
type: unificationXref
DB: CAS
ID: 940-69-2

unificationXref27220
type: unificationXref
DB: LIGAND
ID: C00248

unificationXref27207
type: unificationXref
DB: CapCyc
ID: DIHYDLIPOXN-RXN

phys-ent-participant27245
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27243
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27243
type: protein
NAME: LIPOAMIDE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27244

unificationXref27244
type: unificationXref
DB: CapCyc
ID: SGNU199850-MONOMER

unificationXref27242
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-381

catalysis27236
type: catalysis
CONTROLLED: biochemicalReaction27206
CONTROLLER: phys-ent-participant27240
NAME: LIPOAMIDE DEHYDROGENASE
XREF: unificationXref27237

phys-ent-participant27240
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27238
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27238
type: protein
NAME: LIPOAMIDE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27239

unificationXref27239
type: unificationXref
DB: CapCyc
ID: SGNU203515-MONOMER

unificationXref27237
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-622

catalysis27231
type: catalysis
CONTROLLED: biochemicalReaction27206
CONTROLLER: phys-ent-participant27235
NAME: LIPOAMIDE DEHYDROGENASE
XREF: unificationXref27232

phys-ent-participant27235
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27233
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27233
type: protein
NAME: LIPOAMIDE DEHYDROGENASE
ORGANISM: bioSource20982
XREF: unificationXref27234

unificationXref27234
type: unificationXref
DB: CapCyc
ID: SGNU203799-MONOMER

unificationXref27232
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-644

catalysis27201
type: catalysis
CONTROLLED: biochemicalReaction27193
CONTROLLER: phys-ent-participant27205
NAME: SULFITE OXIDASE
XREF: unificationXref27202

biochemicalReaction27193
type: biochemicalReaction
EC-NUMBER: 1.8.3.1
LEFT: phys-ent-participant23342
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24325
NAME: Sulfite oxidase
RIGHT: phys-ent-participant27200
RIGHT: phys-ent-participant24975
XREF: unificationXref27194

unificationXref27194
type: unificationXref
DB: CapCyc
ID: SULFITE-OXIDASE-RXN

unificationXref27202
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-451

catalysis27188
type: catalysis
CONTROLLED: biochemicalReaction27175
CONTROLLER: phys-ent-participant27192
NAME: APS reductase
XREF: unificationXref27189

biochemicalReaction27175
type: biochemicalReaction
EC-NUMBER: 1.8.99.2
LEFT: phys-ent-participant21115
LEFT: phys-ent-participant27179
LEFT: phys-ent-participant24325
NAME: Adenylylsulfate reductase
RIGHT: phys-ent-participant27182
RIGHT: phys-ent-participant24982
XREF: unificationXref27176

phys-ent-participant21115
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21109
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21109
type: smallMolecule
MOLECULAR-WEIGHT: 347.224
NAME: AMP
STRUCTURE: chemicalStructure21114
SYNONYMS: adenosine-5'-phosphate
SYNONYMS: adenosine-phosphate
SYNONYMS: 5'-AMP
SYNONYMS: adenosine-monophosphate
SYNONYMS: adenylic acid
SYNONYMS: A
SYNONYMS: AMP
SYNONYMS: adenosine 5'-monophosphate
SYNONYMS: adenylate
SYNONYMS: 5'-adenylic acid
SYNONYMS: 5'-adenosine monophosphate
SYNONYMS: adenosine 5'-phosphate
XREF: unificationXref21113
XREF: unificationXref21112
XREF: unificationXref21111
XREF: unificationXref21110

chemicalStructure21114
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="AMP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="AMP-atom2" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="AMP-atom3" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="AMP-atom4" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="AMP-atom5" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="AMP-atom6" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="AMP-atom7" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="AMP-atom8" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="AMP-atom9" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="AMP-atom10" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="AMP-atom11" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="AMP-atom12" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="AMP-atom13" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="AMP-atom14" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="AMP-atom15" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="AMP-atom16" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="AMP-atom17" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="AMP-atom18" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="AMP-atom19" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="AMP-atom20" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="AMP-atom21" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="AMP-atom22" elementType="N" x2="7.9852" y2="-6.4411"/> <atom id="AMP-atom23" elementType="O" x2="9.0842" y2="-1.3204"/> <bond id="AMP-bond1" atomRefs="AMP-atom17 AMP-atom23" order="1"/> <bond id="AMP-bond2" atomRefs="AMP-atom22 AMP-atom12" order="1"/> <bond id="AMP-bond3" atomRefs="AMP-atom1 AMP-atom21" order="2"/> <bond id="AMP-bond4" atomRefs="AMP-atom16 AMP-atom2" order="1"/> <bond id="AMP-bond5" atomRefs="AMP-atom3 AMP-atom21" order="1"/> <bond id="AMP-bond6" atomRefs="AMP-atom6 AMP-atom4" order="A"/> <bond id="AMP-bond7" atomRefs="AMP-atom4 AMP-atom20" order="A"/> <bond id="AMP-bond8" atomRefs="AMP-atom5 AMP-atom8" order="…

unificationXref21113
type: unificationXref
DB: CapCyc
ID: AMP

unificationXref21112
type: unificationXref
DB: NCI
ID: 20264

unificationXref21111
type: unificationXref
DB: CAS
ID: 61-19-8

unificationXref21110
type: unificationXref
DB: LIGAND
ID: C00020

phys-ent-participant24982
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24976
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24976
type: smallMolecule
MOLECULAR-WEIGHT: 427.282
NAME: APS
STRUCTURE: chemicalStructure24981
SYNONYMS: Adenosine 5'-phosphosulfate
SYNONYMS: adenylyl-sulfate
SYNONYMS: adenosine phosphosulfate
SYNONYMS: adenosine 5'-sulphatophosphate
XREF: unificationXref24980
XREF: unificationXref24979
XREF: unificationXref24978
XREF: unificationXref24977

chemicalStructure24981
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="APS-atom1" elementType="H" x2="7.4515" y2="-8.2792"/> <atom id="APS-atom2" elementType="H" x2="9.7667" y2="-8.2792"/> <atom id="APS-atom3" elementType="N" x2="7.1474" y2="0.0"/> <atom id="APS-atom4" elementType="O" x2="4.258" y2="-4.2914"/> <atom id="APS-atom5" elementType="O" x2="1.4703" y2="-4.2914"/> <atom id="APS-atom6" elementType="O" x2="0.0" y2="-5.7616"/> <atom id="APS-atom7" elementType="O" x2="7.9079" y2="-9.0396"/> <atom id="APS-atom8" elementType="O" x2="9.2425" y2="-9.0396"/> <atom id="APS-atom9" elementType="O" x2="4.258" y2="-7.2486"/> <atom id="APS-atom10" elementType="O" x2="1.4703" y2="-7.2486"/> <atom id="APS-atom11" elementType="C" x2="5.9645" y2="-3.7171"/> <atom id="APS-atom12" elementType="C" x2="10.7467" y2="-2.9228"/> <atom id="APS-atom13" elementType="C" x2="6.8773" y2="-5.7616"/> <atom id="APS-atom14" elementType="N" x2="5.9645" y2="-2.2135"/> <atom id="APS-atom15" elementType="N" x2="7.2658" y2="-4.4098"/> <atom id="APS-atom16" elementType="N" x2="9.7156" y2="-1.5881"/> <atom id="APS-atom17" elementType="O" x2="5.576" y2="-5.7616"/> <atom id="APS-atom18" elementType="O" x2="8.6177" y2="-6.725"/> <atom id="APS-atom19" elementType="O" x2="2.8216" y2="-5.7616"/> <atom id="APS-atom20" elementType="C" x2="7.1474" y2="-1.4697"/> <atom id="APS-atom21" elementType="C" x2="8.4654" y2="-2.1624"/> <atom id="APS-atom22" elementType="C" x2="8.4654" y2="-3.616"/> <atom id="APS-atom23" elementType="C" x2="7.9079" y2="-8.2119"/> <atom id="APS-atom24" elementType="C" x2="9.2425" y2="-8.2119"/> <atom id="APS-atom25" elementType="N" x2="9.7667" y2="-4.2914"/> <atom id="APS-atom26" elementType="C" x2="7.4515" y2="-7.4004"/> <atom id="APS-atom27" elementType="C" x2="9.7667" y2="-7.4004"/> <atom id="APS-atom28" elementType="P" x2="4.258" y2="-5.7616"/> <atom id="APS-atom29" elementType="S" x2="1.4703" y2="-5.7616"/> <bond id="APS-bond1" atomRefs="APS-atom27 APS-atom25" order="1"/> <bond id="APS-bond2" atomRefs="APS-atom24 APS-atom27" order="1"/> <bon…

unificationXref24980
type: unificationXref
DB: CapCyc
ID: APS

unificationXref24979
type: unificationXref
DB: CAS
ID: 485-84-7

unificationXref24978
type: unificationXref
DB: PubChem
ID: 10238

unificationXref24977
type: unificationXref
DB: LIGAND
ID: C00224

unificationXref27176
type: unificationXref
DB: CapCyc
ID: ADENYLYLSULFATE-REDUCTASE-RXN

phys-ent-participant27192
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27190
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27190
type: protein
NAME: APS reductase
ORGANISM: bioSource20982
XREF: unificationXref27191

unificationXref27191
type: unificationXref
DB: CapCyc
ID: SGNU196755-MONOMER

unificationXref27189
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-100

catalysis27183
type: catalysis
CONTROLLED: biochemicalReaction27175
CONTROLLER: phys-ent-participant27187
NAME: APS reductase
XREF: unificationXref27184

phys-ent-participant27187
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27185
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27185
type: protein
NAME: APS reductase
ORGANISM: bioSource20982
XREF: unificationXref27186

unificationXref27186
type: unificationXref
DB: CapCyc
ID: SGNU197855-MONOMER

unificationXref27184
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-230

catalysis27148
type: catalysis
CONTROLLED: biochemicalReaction27116
CONTROLLER: phys-ent-participant27152
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
XREF: unificationXref27149

biochemicalReaction27116
type: biochemicalReaction
EC-NUMBER: 2.1.1.104
LEFT: phys-ent-participant21467
LEFT: phys-ent-participant23319
NAME: Caffeoyl-CoA O-methyltransferase
RIGHT: phys-ent-participant24031
RIGHT: phys-ent-participant21482
SYNONYMS: Trans-caffeoyl-CoA 3-O-methyltransferase
XREF: unificationXref27132
XREF: unificationXref27131
XREF: unificationXref27130
XREF: unificationXref27129
XREF: unificationXref27128
XREF: unificationXref27127
XREF: unificationXref27126
XREF: unificationXref27125
XREF: unificationXref27124
XREF: unificationXref27123
XREF: unificationXref27122
XREF: unificationXref27121
XREF: unificationXref27120
XREF: unificationXref27119
XREF: unificationXref27118
XREF: unificationXref27117

phys-ent-participant21467
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21464
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21464
type: smallMolecule
MOLECULAR-WEIGHT: 929.679
NAME: caffeoyl-CoA
STRUCTURE: chemicalStructure21466
XREF: unificationXref21465

chemicalStructure21466
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CAFFEOYL-COA-atom1" elementType="N" x2="0.031007767" y2="-0.21705425"/> <atom id="CAFFEOYL-COA-atom2" elementType="N" x2="0.751938" y2="-0.67700255"/> <atom id="CAFFEOYL-COA-atom3" elementType="C" x2="-0.27131784" y2="-0.26873386"/> <atom id="CAFFEOYL-COA-atom4" elementType="C" x2="0.7622739" y2="-0.4186046"/> <atom id="CAFFEOYL-COA-atom5" elementType="C" x2="-0.503876" y2="-0.24806201"/> <atom id="CAFFEOYL-COA-atom6" elementType="O" x2="0.16537476" y2="-0.62015504"/> <atom id="CAFFEOYL-COA-atom7" elementType="C" x2="0.74160206" y2="-0.8863049"/> <atom id="CAFFEOYL-COA-atom8" elementType="H" x2="0.88888896" y2="-0.4883721"/> <atom id="CAFFEOYL-COA-atom9" elementType="P" x2="0.29457366" y2="-0.62015504"/> <atom id="CAFFEOYL-COA-atom10" elementType="O" x2="-0.09043926" y2="-0.3901809"/> <atom id="CAFFEOYL-COA-atom11" elementType="O" x2="0.7622739" y2="-0.33074933"/> <atom id="CAFFEOYL-COA-atom12" elementType="S" x2="0.3281654" y2="-0.28423768"/> <atom id="CAFFEOYL-COA-atom13" elementType="O" x2="0.3049096" y2="-0.0852713"/> <atom id="CAFFEOYL-COA-atom14" elementType="C" x2="-0.018087804" y2="-0.71834624"/> <atom id="CAFFEOYL-COA-atom15" elementType="H" x2="0.92764866" y2="-0.43152452"/> <atom id="CAFFEOYL-COA-atom16" elementType="O" x2="-1.0" y2="-0.072351396"/> <atom id="CAFFEOYL-COA-atom17" elementType="C" x2="0.997416" y2="-0.78294575"/> <atom id="CAFFEOYL-COA-atom18" elementType="C" x2="0.13953495" y2="-0.19121444"/> <atom id="CAFFEOYL-COA-atom19" elementType="C" x2="-0.09043926" y2="-0.27390176"/> <atom id="CAFFEOYL-COA-atom20" elementType="O" x2="-0.18604648" y2="-0.71834624"/> <atom id="CAFFEOYL-COA-atom21" elementType="N" x2="0.9250647" y2="-0.875969"/> <atom id="CAFFEOYL-COA-atom22" elementType="C" x2="-0.18863046" y2="-0.21447027"/> <atom id="CAFFEOYL-COA-atom23" elementType="C" x2="0.83462536" y2="-0.8372093"/> <atom id="CAFFEOYL-COA-atom24" elementType="C" x2="-0.24289405" y2="-0.17829454"/> <atom id="CAFFEOYL-COA-atom25" elementType="C" x2="-0.0…

unificationXref21465
type: unificationXref
DB: CapCyc
ID: CAFFEOYL-COA

phys-ent-participant23319
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23314
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23314
type: smallMolecule
MOLECULAR-WEIGHT: 399.444
NAME: S-adenosyl-L-methionine
STRUCTURE: chemicalStructure23318
SYNONYMS: AdoMet
SYNONYMS: SAM
SYNONYMS: 2-S-adenosyl-L-methionine
SYNONYMS: S-adenosyl-methionine
SYNONYMS: adenosylmethionine
SYNONYMS: S-adenosylmethionine
XREF: unificationXref23317
XREF: unificationXref23316
XREF: unificationXref23315

chemicalStructure23318
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="S-ADENOSYLMETHIONINE-atom1" elementType="H" x2="7.8375" y2="7.8375"/> <atom id="S-ADENOSYLMETHIONINE-atom2" elementType="H" x2="10.0383" y2="7.8375"/> <atom id="S-ADENOSYLMETHIONINE-atom3" elementType="H" x2="10.7331" y2="7.9727"/> <atom id="S-ADENOSYLMETHIONINE-atom4" elementType="C" x2="6.9881" y2="5.6561"/> <atom id="S-ADENOSYLMETHIONINE-atom5" elementType="N" x2="8.4553" y2="0.0"/> <atom id="S-ADENOSYLMETHIONINE-atom6" elementType="N" x2="2.3742" y2="4.4011"/> <atom id="S-ADENOSYLMETHIONINE-atom7" elementType="O" x2="1.1968" y2="7.8951"/> <atom id="S-ADENOSYLMETHIONINE-atom8" elementType="O" x2="0.0" y2="5.7719"/> <atom id="S-ADENOSYLMETHIONINE-atom9" elementType="O" x2="7.8375" y2="9.5363"/> <atom id="S-ADENOSYLMETHIONINE-atom10" elementType="O" x2="10.0383" y2="9.5363"/> <atom id="S-ADENOSYLMETHIONINE-atom11" elementType="C" x2="7.3549" y2="3.2624"/> <atom id="S-ADENOSYLMETHIONINE-atom12" elementType="C" x2="11.7371" y2="2.7022"/> <atom id="S-ADENOSYLMETHIONINE-atom13" elementType="C" x2="3.494" y2="6.4861"/> <atom id="S-ADENOSYLMETHIONINE-atom14" elementType="C" x2="4.6909" y2="5.8107"/> <atom id="S-ADENOSYLMETHIONINE-atom15" elementType="C" x2="6.1775" y2="7.3161"/> <atom id="S-ADENOSYLMETHIONINE-atom16" elementType="N" x2="7.3549" y2="2.0656"/> <atom id="S-ADENOSYLMETHIONINE-atom17" elementType="N" x2="8.5517" y2="4.0537"/> <atom id="S-ADENOSYLMETHIONINE-atom18" elementType="N" x2="10.8683" y2="1.409"/> <atom id="S-ADENOSYLMETHIONINE-atom19" elementType="O" x2="8.9767" y2="6.3315"/> <atom id="S-ADENOSYLMETHIONINE-atom20" elementType="C" x2="1.1968" y2="6.4861"/> <atom id="S-ADENOSYLMETHIONINE-atom21" elementType="C" x2="8.4553" y2="1.409"/> <atom id="S-ADENOSYLMETHIONINE-atom22" elementType="C" x2="9.5751" y2="1.9686"/> <atom id="S-ADENOSYLMETHIONINE-atom23" elementType="C" x2="9.5751" y2="3.3006"/> <atom id="S-ADENOSYLMETHIONINE-atom24" elementType="C" x2="2.3742" y2="5.8107"/> <atom id="S-ADENOSYLMETHIONINE-atom25" elementType="C" x2="7.1621" y2…

unificationXref23317
type: unificationXref
DB: CapCyc
ID: S-ADENOSYLMETHIONINE

unificationXref23316
type: unificationXref
DB: CAS
ID: 29908-03-0

unificationXref23315
type: unificationXref
DB: LIGAND
ID: C00019

phys-ent-participant24031
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24026
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24026
type: smallMolecule
MOLECULAR-WEIGHT: 384.409
NAME: S-adenosyl-homocysteine
STRUCTURE: chemicalStructure24030
SYNONYMS: S-adenosylhomocysteine
SYNONYMS: S-adenosyl-homocysteine
SYNONYMS: 2-S-adenosyl-L-homocysteine
SYNONYMS: AdoHcy
SYNONYMS: S-adenosyl-L-homocysteine
SYNONYMS: adenosyl-homo-cys
SYNONYMS: adenosylhomocysteine
SYNONYMS: adenosylhomo-cys
SYNONYMS: SAH
XREF: unificationXref24029
XREF: unificationXref24028
XREF: unificationXref24027

chemicalStructure24030
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ADENOSYL-HOMO-CYS-atom1" elementType="H" x2="7.5977" y2="7.9585"/> <atom id="ADENOSYL-HOMO-CYS-atom2" elementType="H" x2="8.19" y2="7.4691"/> <atom id="ADENOSYL-HOMO-CYS-atom3" elementType="H" x2="10.0187" y2="7.4691"/> <atom id="ADENOSYL-HOMO-CYS-atom4" elementType="H" x2="10.6109" y2="7.9585"/> <atom id="ADENOSYL-HOMO-CYS-atom5" elementType="N" x2="7.9579" y2="0.0"/> <atom id="ADENOSYL-HOMO-CYS-atom6" elementType="N" x2="2.4466" y2="8.37"/> <atom id="ADENOSYL-HOMO-CYS-atom7" elementType="O" x2="1.2102" y2="4.9447"/> <atom id="ADENOSYL-HOMO-CYS-atom8" elementType="O" x2="0.0" y2="7.0055"/> <atom id="ADENOSYL-HOMO-CYS-atom9" elementType="O" x2="8.19" y2="9.1172"/> <atom id="ADENOSYL-HOMO-CYS-atom10" elementType="O" x2="10.0187" y2="9.1172"/> <atom id="ADENOSYL-HOMO-CYS-atom11" elementType="C" x2="6.6448" y2="3.6317"/> <atom id="ADENOSYL-HOMO-CYS-atom12" elementType="C" x2="11.6667" y2="2.8845"/> <atom id="ADENOSYL-HOMO-CYS-atom13" elementType="C" x2="4.7904" y2="6.9798"/> <atom id="ADENOSYL-HOMO-CYS-atom14" elementType="C" x2="3.6054" y2="6.3355"/> <atom id="ADENOSYL-HOMO-CYS-atom15" elementType="C" x2="7.5977" y2="6.2841"/> <atom id="ADENOSYL-HOMO-CYS-atom16" elementType="N" x2="6.6448" y2="2.138"/> <atom id="ADENOSYL-HOMO-CYS-atom17" elementType="N" x2="8.035" y2="4.4297"/> <atom id="ADENOSYL-HOMO-CYS-atom18" elementType="N" x2="10.5852" y2="1.468"/> <atom id="ADENOSYL-HOMO-CYS-atom19" elementType="O" x2="9.0657" y2="6.2584"/> <atom id="ADENOSYL-HOMO-CYS-atom20" elementType="S" x2="5.9748" y2="6.2841"/> <atom id="ADENOSYL-HOMO-CYS-atom21" elementType="C" x2="1.2102" y2="6.3355"/> <atom id="ADENOSYL-HOMO-CYS-atom22" elementType="C" x2="7.9579" y2="1.3908"/> <atom id="ADENOSYL-HOMO-CYS-atom23" elementType="C" x2="9.2201" y2="2.0865"/> <atom id="ADENOSYL-HOMO-CYS-atom24" elementType="C" x2="9.2201" y2="3.5802"/> <atom id="ADENOSYL-HOMO-CYS-atom25" elementType="C" x2="2.4466" y2="6.9798"/> <atom id="ADENOSYL-HOMO-CYS-atom26" elementType="N" x2="10.6109" y2="…

unificationXref24029
type: unificationXref
DB: CapCyc
ID: ADENOSYL-HOMO-CYS

unificationXref24028
type: unificationXref
DB: CAS
ID: 979-92-0

unificationXref24027
type: unificationXref
DB: LIGAND
ID: C00021

phys-ent-participant21482
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21475
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21475
type: smallMolecule
COMMENT: NIL Click on the "CoA" group in the structure to see the full structure
MOLECULAR-WEIGHT: 943.705
NAME: feruloyl-CoA
STRUCTURE: chemicalStructure21481
SYNONYMS: trans-feruloyl-CoA
XREF: unificationXref21480
XREF: unificationXref21479
XREF: unificationXref21478
XREF: unificationXref21477
XREF: unificationXref21476

chemicalStructure21481
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FERULOYL-COA-atom1" elementType="O" x2="0.29457366" y2="-0.50904393"/> <atom id="FERULOYL-COA-atom2" elementType="C" x2="-0.018087804" y2="-0.60465115"/> <atom id="FERULOYL-COA-atom3" elementType="C" x2="-0.059431493" y2="-0.067183435"/> <atom id="FERULOYL-COA-atom4" elementType="S" x2="0.3281654" y2="-0.28423768"/> <atom id="FERULOYL-COA-atom5" elementType="C" x2="0.88888896" y2="-0.4186046"/> <atom id="FERULOYL-COA-atom6" elementType="C" x2="0.92764866" y2="-0.501292"/> <atom id="FERULOYL-COA-atom7" elementType="C" x2="0.13695097" y2="-0.27648574"/> <atom id="FERULOYL-COA-atom8" elementType="O" x2="-0.7932817" y2="0.23772609"/> <atom id="FERULOYL-COA-atom9" elementType="P" x2="0.7622739" y2="-0.21705425"/> <atom id="FERULOYL-COA-atom10" elementType="O" x2="-0.09043926" y2="-0.3901809"/> <atom id="FERULOYL-COA-atom11" elementType="N" x2="0.74160206" y2="-1.0"/> <atom id="FERULOYL-COA-atom12" elementType="C" x2="-0.018087804" y2="-0.49354005"/> <atom id="FERULOYL-COA-atom13" elementType="C" x2="-0.09043926" y2="-0.27390176"/> <atom id="FERULOYL-COA-atom14" elementType="C" x2="-0.0981912" y2="-0.5555556"/> <atom id="FERULOYL-COA-atom15" elementType="C" x2="-0.27131784" y2="-0.26873386"/> <atom id="FERULOYL-COA-atom16" elementType="O" x2="0.7622739" y2="-0.10335916"/> <atom id="FERULOYL-COA-atom17" elementType="O" x2="0.88888896" y2="-0.35142118"/> <atom id="FERULOYL-COA-atom18" elementType="O" x2="0.7622739" y2="-0.33074933"/> <atom id="FERULOYL-COA-atom19" elementType="O" x2="-0.0981912" y2="-0.44186044"/> <atom id="FERULOYL-COA-atom20" elementType="C" x2="-0.503876" y2="0.0930233"/> <atom id="FERULOYL-COA-atom21" elementType="O" x2="-0.18604648" y2="-0.71834624"/> <atom id="FERULOYL-COA-atom22" elementType="C" x2="-0.18604648" y2="-0.60465115"/> <atom id="FERULOYL-COA-atom23" elementType="C" x2="0.7622739" y2="-0.4186046"/> <atom id="FERULOYL-COA-atom24" elementType="C" x2="0.062015533" y2="-0.5555556"/> <atom id="FERULOYL-COA-atom25" elementType="N" x2="…

unificationXref21480
type: unificationXref
DB: CapCyc
ID: FERULOYL-COA

unificationXref21479
type: unificationXref
DB: PubChem
ID: 656487

unificationXref21478
type: unificationXref
DB: PubChem
ID: 11966129

unificationXref21477
type: unificationXref
DB: PubChem
ID: 5280347

unificationXref21476
type: unificationXref
DB: LIGAND
ID: C00406

unificationXref27132
type: unificationXref
DB: CapCyc
ID: CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

unificationXref27131
type: unificationXref
DB: UniProtKB
ID: P28034

unificationXref27130
type: unificationXref
DB: UniProtKB
ID: O65307

unificationXref27129
type: unificationXref
DB: UniProtKB
ID: Q42945

unificationXref27128
type: unificationXref
DB: UniProtKB
ID: O24144

unificationXref27127
type: unificationXref
DB: UniProtKB
ID: O24149

unificationXref27126
type: unificationXref
DB: UniProtKB
ID: O24150

unificationXref27125
type: unificationXref
DB: UniProtKB
ID: O24151

unificationXref27124
type: unificationXref
DB: UniProtKB
ID: O04899

unificationXref27123
type: unificationXref
DB: UniProtKB
ID: O49499

unificationXref27122
type: unificationXref
DB: UniProtKB
ID: Q9SVI7

unificationXref27121
type: unificationXref
DB: UniProtKB
ID: Q40313

unificationXref27120
type: unificationXref
DB: UniProtKB
ID: Q43095

unificationXref27119
type: unificationXref
DB: UniProtKB
ID: O04854

unificationXref27118
type: unificationXref
DB: UniProtKB
ID: O65162

unificationXref27117
type: unificationXref
DB: UniProtKB
ID: O65362

phys-ent-participant27152
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27150
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27150
type: protein
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27151

unificationXref27151
type: unificationXref
DB: CapCyc
ID: SGNU198026-MONOMER

unificationXref27149
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-253

catalysis27143
type: catalysis
CONTROLLED: biochemicalReaction27116
CONTROLLER: phys-ent-participant27147
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
XREF: unificationXref27144

phys-ent-participant27147
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27145
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27145
type: protein
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27146

unificationXref27146
type: unificationXref
DB: CapCyc
ID: SGNU198639-MONOMER

unificationXref27144
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-318

catalysis27138
type: catalysis
CONTROLLED: biochemicalReaction27116
CONTROLLER: phys-ent-participant27142
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
XREF: unificationXref27139

phys-ent-participant27142
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27140
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27140
type: protein
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27141

unificationXref27141
type: unificationXref
DB: CapCyc
ID: SGNU201835-MONOMER

unificationXref27139
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-528

catalysis27133
type: catalysis
CONTROLLED: biochemicalReaction27116
CONTROLLER: phys-ent-participant27137
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
XREF: unificationXref27134

phys-ent-participant27137
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27135
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27135
type: protein
NAME: CAFFEOYL-COA O-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27136

unificationXref27136
type: unificationXref
DB: CapCyc
ID: SGNU203388-MONOMER

unificationXref27134
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-617

catalysis27114
type: catalysis
CONTROLLED: biochemicalReaction27098
CONTROLLER: phys-ent-participant27043
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27115

biochemicalReaction27098
type: biochemicalReaction
EC-NUMBER: 2.1.1.14
LEFT: phys-ent-participant27104
LEFT: phys-ent-participant22424
NAME: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
RIGHT: phys-ent-participant27109
RIGHT: phys-ent-participant26010
SYNONYMS: Tetrahydropteroyltriglutamate methyltransferase
SYNONYMS: Methionine synthase
XREF: unificationXref27099

phys-ent-participant27104
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27100
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27100
type: smallMolecule
MOLECULAR-WEIGHT: 640.606
NAME: 5-methyltetrahydropteroyltri-L-glutamate
STRUCTURE: chemicalStructure27103
XREF: unificationXref27102
XREF: unificationXref27101

chemicalStructure27103
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-1302-atom1" elementType="C" x2="-0.031700313" y2="-0.06051874"/> <atom id="CPD-1302-atom2" elementType="O" x2="-1.0" y2="-0.6541787"/> <atom id="CPD-1302-atom3" elementType="C" x2="0.4207492" y2="-0.66570604"/> <atom id="CPD-1302-atom4" elementType="C" x2="-0.109510124" y2="-0.15850145"/> <atom id="CPD-1302-atom5" elementType="C" x2="0.27953887" y2="-0.7636888"/> <atom id="CPD-1302-atom6" elementType="C" x2="0.034582138" y2="-0.7636888"/> <atom id="CPD-1302-atom7" elementType="C" x2="0.034582138" y2="-0.9020173"/> <atom id="CPD-1302-atom8" elementType="N" x2="-0.57060516" y2="-0.5360231"/> <atom id="CPD-1302-atom9" elementType="O" x2="0.38904893" y2="-0.29683"/> <atom id="CPD-1302-atom10" elementType="C" x2="-0.7867435" y2="-0.66570604"/> <atom id="CPD-1302-atom11" elementType="C" x2="-0.6685879" y2="-0.75504327"/> <atom id="CPD-1302-atom12" elementType="O" x2="-0.9020173" y2="-0.88760805"/> <atom id="CPD-1302-atom13" elementType="C" x2="0.6801152" y2="-0.19596547"/> <atom id="CPD-1302-atom14" elementType="C" x2="0.8645532" y2="-0.097982764"/> <atom id="CPD-1302-atom15" elementType="O" x2="-0.05475509" y2="0.14697409"/> <atom id="CPD-1302-atom16" elementType="O" x2="-0.103746414" y2="-0.52161384"/> <atom id="CPD-1302-atom17" elementType="C" x2="0.61095095" y2="-0.31988472"/> <atom id="CPD-1302-atom18" elementType="C" x2="-0.031700313" y2="-0.2651297"/> <atom id="CPD-1302-atom19" elementType="C" x2="-0.57060516" y2="-0.66570604"/> <atom id="CPD-1302-atom20" elementType="N" x2="0.115273714" y2="-0.27377522"/> <atom id="CPD-1302-atom21" elementType="C" x2="-0.21325648" y2="-0.8991355"/> <atom id="CPD-1302-atom22" elementType="N" x2="0.68876076" y2="-1.0"/> <atom id="CPD-1302-atom23" elementType="N" x2="0.14697409" y2="-1.0"/> <atom id="CPD-1302-atom24" elementType="O" x2="0.4207492" y2="-0.47838616"/> <atom id="CPD-1302-atom25" elementType="N" x2="0.556196" y2="-0.7636888"/> <atom id="CPD-1302-atom26" elementType="C" x2="0.556196" y2="-0.9020173"/> <atom …

unificationXref27102
type: unificationXref
DB: CapCyc
ID: CPD-1302

unificationXref27101
type: unificationXref
DB: LIGAND
ID: C04489

phys-ent-participant22424
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22418
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22418
type: smallMolecule
MOLECULAR-WEIGHT: 135.181
NAME: homocysteine
STRUCTURE: chemicalStructure22423
SYNONYMS: homo-cys
SYNONYMS: L-Homocysteine
XREF: unificationXref22422
XREF: unificationXref22421
XREF: unificationXref22420
XREF: unificationXref22419

chemicalStructure22423
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="HOMO-CYS-atom1" elementType="C" x2="0.6" y2="-0.5405"/> <atom id="HOMO-CYS-atom2" elementType="C" x2="-0.60331" y2="-0.30909"/> <atom id="HOMO-CYS-atom3" elementType="S" x2="0.99669" y2="-0.30909"/> <atom id="HOMO-CYS-atom4" elementType="O" x2="-1.0" y2="-0.5405"/> <atom id="HOMO-CYS-atom5" elementType="O" x2="-0.60331" y2="0.15041"/> <atom id="HOMO-CYS-atom6" elementType="C" x2="0.2" y2="-0.30909"/> <atom id="HOMO-CYS-atom7" elementType="C" x2="-0.2" y2="-0.5405"/> <atom id="HOMO-CYS-atom8" elementType="N" x2="-0.2" y2="-1.0"/> <bond id="HOMO-CYS-bond1" atomRefs="HOMO-CYS-atom8 HOMO-CYS-atom7" order="1"/> <bond id="HOMO-CYS-bond2" atomRefs="HOMO-CYS-atom7 HOMO-CYS-atom2" order="1"/> <bond id="HOMO-CYS-bond3" atomRefs="HOMO-CYS-atom6 HOMO-CYS-atom7" order="1"/> <bond id="HOMO-CYS-bond4" atomRefs="HOMO-CYS-atom5 HOMO-CYS-atom2" order="2"/> <bond id="HOMO-CYS-bond5" atomRefs="HOMO-CYS-atom4 HOMO-CYS-atom2" order="1"/> <bond id="HOMO-CYS-bond6" atomRefs="HOMO-CYS-atom3 HOMO-CYS-atom1" order="1"/> <bond id="HOMO-CYS-bond7" atomRefs="HOMO-CYS-atom1 HOMO-CYS-atom6" order="1"/> <formula concise="C 4 H 9 N 1 O 2 S 1" formalCharge="0"/> 135.181 C(S)CC(N)C(=O)O

unificationXref22422
type: unificationXref
DB: CapCyc
ID: HOMO-CYS

unificationXref22421
type: unificationXref
DB: CAS
ID: 454-28-4

unificationXref22420
type: unificationXref
DB: LIGAND
ID: C00155

unificationXref22419
type: unificationXref
DB: CAS
ID: 6027-13-0

phys-ent-participant27109
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27105
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27105
type: smallMolecule
MOLECULAR-WEIGHT: 626.579
NAME: tetrahydropteroyltri-L-glutamate
STRUCTURE: chemicalStructure27108
XREF: unificationXref27107
XREF: unificationXref27106

chemicalStructure27108
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-1301-atom1" elementType="C" x2="-0.7867435" y2="-0.66570604"/> <atom id="CPD-1301-atom2" elementType="N" x2="0.115273714" y2="-0.27377522"/> <atom id="CPD-1301-atom3" elementType="O" x2="-0.33429396" y2="-0.66570604"/> <atom id="CPD-1301-atom4" elementType="N" x2="0.4207492" y2="-1.0"/> <atom id="CPD-1301-atom5" elementType="O" x2="-0.9020173" y2="-0.88760805"/> <atom id="CPD-1301-atom6" elementType="N" x2="0.68876076" y2="-1.0"/> <atom id="CPD-1301-atom7" elementType="O" x2="0.76657057" y2="-0.011527419"/> <atom id="CPD-1301-atom8" elementType="N" x2="0.14697409" y2="-0.66570604"/> <atom id="CPD-1301-atom9" elementType="C" x2="0.8645532" y2="-0.097982764"/> <atom id="CPD-1301-atom10" elementType="O" x2="0.4207492" y2="-0.47838616"/> <atom id="CPD-1301-atom11" elementType="C" x2="-0.21325648" y2="-0.7608069"/> <atom id="CPD-1301-atom12" elementType="C" x2="0.27953887" y2="-0.9020173"/> <atom id="CPD-1301-atom13" elementType="O" x2="-0.103746414" y2="-0.52161384"/> <atom id="CPD-1301-atom14" elementType="C" x2="0.556196" y2="-0.9020173"/> <atom id="CPD-1301-atom15" elementType="O" x2="-0.24783862" y2="-0.38328534"/> <atom id="CPD-1301-atom16" elementType="C" x2="-0.031700313" y2="-0.2651297"/> <atom id="CPD-1301-atom17" elementType="C" x2="-0.9020173" y2="-0.740634"/> <atom id="CPD-1301-atom18" elementType="C" x2="-0.031700313" y2="-0.06051874"/> <atom id="CPD-1301-atom19" elementType="O" x2="-1.0" y2="-0.6541787"/> <atom id="CPD-1301-atom20" elementType="C" x2="0.4207492" y2="-0.66570604"/> <atom id="CPD-1301-atom21" elementType="C" x2="-0.109510124" y2="-0.15850145"/> <atom id="CPD-1301-atom22" elementType="C" x2="0.27953887" y2="-0.7636888"/> <atom id="CPD-1301-atom23" elementType="C" x2="0.034582138" y2="-0.7636888"/> <atom id="CPD-1301-atom24" elementType="C" x2="0.034582138" y2="-0.9020173"/> <atom id="CPD-1301-atom25" elementType="N" x2="-0.57060516" y2="-0.5360231"/> <atom id="CPD-1301-atom26" elementType="O" x2="0.38904893" y2="-0.29683"/> <ato…

unificationXref27107
type: unificationXref
DB: CapCyc
ID: CPD-1301

unificationXref27106
type: unificationXref
DB: LIGAND
ID: C04144

phys-ent-participant26010
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24895
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24895
type: smallMolecule
MOLECULAR-WEIGHT: 149.207
NAME: L-methionine
STRUCTURE: chemicalStructure24900
SYNONYMS: M
SYNONYMS: met
SYNONYMS: methionine
XREF: unificationXref24899
XREF: unificationXref24898
XREF: unificationXref24897
XREF: unificationXref24896

chemicalStructure24900
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MET-atom1" elementType="C" x2="0.0" y2="-0.7901"/> <atom id="MET-atom2" elementType="N" x2="6.06" y2="0.0"/> <atom id="MET-atom3" elementType="O" x2="6.07" y2="-2.84"/> <atom id="MET-atom4" elementType="O" x2="3.6502" y2="-2.8199"/> <atom id="MET-atom5" elementType="C" x2="2.45" y2="-0.75"/> <atom id="MET-atom6" elementType="C" x2="3.6301" y2="-0.0401"/> <atom id="MET-atom7" elementType="S" x2="1.2099" y2="-0.08"/> <atom id="MET-atom8" elementType="C" x2="4.8601" y2="-2.1298"/> <atom id="MET-atom9" elementType="C" x2="4.8601" y2="-0.7199"/> <bond id="MET-bond1" atomRefs="MET-atom8 MET-atom9" order="1"/> <bond id="MET-bond2" atomRefs="MET-atom6 MET-atom9" order="1"/> <bond id="MET-bond3" atomRefs="MET-atom5 MET-atom7" order="1"/> <bond id="MET-bond4" atomRefs="MET-atom5 MET-atom6" order="1"/> <bond id="MET-bond5" atomRefs="MET-atom4 MET-atom8" order="1"/> <bond id="MET-bond6" atomRefs="MET-atom3 MET-atom8" order="2"/> <bond id="MET-bond7" atomRefs="MET-atom9 MET-atom2" order="1"/> <bond id="MET-bond8" atomRefs="MET-atom1 MET-atom7" order="1"/> <formula concise="C 5 H 11 N 1 O 2 S 1" formalCharge="0"/> 149.207 C(SC)CC(N)C(O)=O

unificationXref24899
type: unificationXref
DB: CapCyc
ID: MET

unificationXref24898
type: unificationXref
DB: CAS
ID: 7005-18-7

unificationXref24897
type: unificationXref
DB: CAS
ID: 63-68-3

unificationXref24896
type: unificationXref
DB: LIGAND
ID: C00073

unificationXref27099
type: unificationXref
DB: CapCyc
ID: HOMOCYSMET-RXN

phys-ent-participant27043
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27041
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27041
type: protein
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27042

unificationXref27042
type: unificationXref
DB: CapCyc
ID: SGNU196245-MONOMER

unificationXref27115
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-21

catalysis27112
type: catalysis
CONTROLLED: biochemicalReaction27098
CONTROLLER: phys-ent-participant27038
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27113

phys-ent-participant27038
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27036
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27036
type: protein
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27037

unificationXref27037
type: unificationXref
DB: CapCyc
ID: SGNU196392-MONOMER

unificationXref27113
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-53

catalysis27110
type: catalysis
CONTROLLED: biochemicalReaction27098
CONTROLLER: phys-ent-participant27033
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27111

phys-ent-participant27033
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27031
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27031
type: protein
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27032

unificationXref27032
type: unificationXref
DB: CapCyc
ID: SGNU199056-MONOMER

unificationXref27111
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-735

catalysis27096
type: catalysis
CONTROLLED: biochemicalReaction27094
CONTROLLER: phys-ent-participant27093
NAME: HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27097

biochemicalReaction27094
type: biochemicalReaction
EC-NUMBER: 2.1.1.10
LEFT: phys-ent-participant22424
LEFT: phys-ent-participant23319
NAME: Homocysteine S-methyltransferase
RIGHT: phys-ent-participant24031
RIGHT: phys-ent-participant26010
XREF: unificationXref27095

unificationXref27095
type: unificationXref
DB: CapCyc
ID: HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN

phys-ent-participant27093
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27091
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27091
type: protein
NAME: HOMOCYSTEINE S-METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27092

unificationXref27092
type: unificationXref
DB: CapCyc
ID: SGNU200835-MONOMER

unificationXref27097
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-449

catalysis27089
type: catalysis
CONTROLLED: biochemicalReaction27080
CONTROLLER: phys-ent-participant27093
NAME: HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27090

biochemicalReaction27080
type: biochemicalReaction
EC-NUMBER: 2.1.1.-
LEFT: phys-ent-participant27088
LEFT: phys-ent-participant22424
NAME: MMUM-RXN
RIGHT: phys-ent-participant24901
XREF: unificationXref27081

phys-ent-participant27088
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27082
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27082
type: smallMolecule
MOLECULAR-WEIGHT: 164.242
NAME: S-Methyl-L-methionine
STRUCTURE: chemicalStructure27087
SYNONYMS: S-methylmethionine
XREF: unificationXref27086
XREF: unificationXref27085
XREF: unificationXref27084
XREF: unificationXref27083

chemicalStructure27087
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-397-atom1" elementType="N" x2="4.5606" y2="3.9803"/> <atom id="CPD-397-atom2" elementType="C" x2="4.5519" y2="3.1534"/> <atom id="CPD-397-atom3" elementType="C" x2="5.2612" y2="2.9043"/> <atom id="CPD-397-atom4" elementType="O" x2="5.2612" y2="2.1655"/> <atom id="CPD-397-atom5" elementType="C" x2="3.9256" y2="2.7347"/> <atom id="CPD-397-atom6" elementType="C" x2="3.217" y2="2.9894"/> <atom id="CPD-397-atom7" elementType="S" x2="2.5384" y2="2.6639" formalCharge="1"/> <atom id="CPD-397-atom8" elementType="C" x2="1.7439" y2="3.1748"/> <atom id="CPD-397-atom9" elementType="O" x2="5.8731" y2="3.3379"/> <atom id="CPD-397-atom10" elementType="C" x2="2.551" y2="1.6709"/> <bond id="CPD-397-bond1" atomRefs="CPD-397-atom7 CPD-397-atom10" order="1"/> <bond id="CPD-397-bond2" atomRefs="CPD-397-atom3 CPD-397-atom9" order="1"/> <bond id="CPD-397-bond3" atomRefs="CPD-397-atom6 CPD-397-atom7" order="1"/> <bond id="CPD-397-bond4" atomRefs="CPD-397-atom7 CPD-397-atom8" order="1"/> <bond id="CPD-397-bond5" atomRefs="CPD-397-atom6 CPD-397-atom5" order="1"/> <bond id="CPD-397-bond6" atomRefs="CPD-397-atom2 CPD-397-atom5" order="1"/> <bond id="CPD-397-bond7" atomRefs="CPD-397-atom3 CPD-397-atom4" order="2"/> <bond id="CPD-397-bond8" atomRefs="CPD-397-atom2 CPD-397-atom3" order="1"/> <bond id="CPD-397-bond9" atomRefs="CPD-397-atom2 CPD-397-atom1" order="1"/> <formula concise="C 6 H 14 N 1 O 2 S 1" formalCharge="0"/> 164.242 C(=O)(O)C(N)CC[S+](C)C

unificationXref27086
type: unificationXref
DB: CapCyc
ID: CPD-397

unificationXref27085
type: unificationXref
DB: CAS
ID: 4727-40-6

unificationXref27084
type: unificationXref
DB: LIGAND
ID: C03172

unificationXref27083
type: unificationXref
DB: CAS
ID: 4289-98-9

phys-ent-participant24901
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24895
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref27081
type: unificationXref
DB: CapCyc
ID: MMUM-RXN

unificationXref27090
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-450

catalysis27039
type: catalysis
CONTROLLED: biochemicalReaction27021
CONTROLLER: phys-ent-participant27043
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27040

biochemicalReaction27021
type: biochemicalReaction
EC-NUMBER: 2.1.1.14
LEFT: phys-ent-participant27028
LEFT: phys-ent-participant22424
NAME: RXN-6301
RIGHT: phys-ent-participant21212
RIGHT: phys-ent-participant26010
XREF: unificationXref27022

phys-ent-participant27028
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27023
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27023
type: smallMolecule
MOLECULAR-WEIGHT: 459.461
NAME: 5-methyl-THF
STRUCTURE: chemicalStructure27027
SYNONYMS: N5-methyltetrahydropteroyl mono-L-glutamate
SYNONYMS: 5-methyl-tetrahydrofolate
SYNONYMS: 5-methyl-5,6,7,8-tetrahydrofolate
SYNONYMS: n5-methyltetrahydrofolate
SYNONYMS: CH3-THF
SYNONYMS: n5-CH3-THF
SYNONYMS: n5-methyl-THF
SYNONYMS: methyl-THF
SYNONYMS: methyl-tetrahydrofolate
SYNONYMS: methyl-H4F
XREF: unificationXref27026
XREF: unificationXref27025
XREF: unificationXref27024

chemicalStructure27027
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="5-METHYL-THF-atom1" elementType="H" x2="0.0" y2="-2.839"/> <atom id="5-METHYL-THF-atom2" elementType="C" x2="4.8213" y2="-4.223"/> <atom id="5-METHYL-THF-atom3" elementType="N" x2="0.0873" y2="0.0"/> <atom id="5-METHYL-THF-atom4" elementType="O" x2="15.2238" y2="-9.7223"/> <atom id="5-METHYL-THF-atom5" elementType="O" x2="14.9687" y2="-2.6642"/> <atom id="5-METHYL-THF-atom6" elementType="O" x2="12.2754" y2="-2.9193"/> <atom id="5-METHYL-THF-atom7" elementType="O" x2="2.383" y2="-4.223"/> <atom id="5-METHYL-THF-atom8" elementType="O" x2="17.2361" y2="-8.5035"/> <atom id="5-METHYL-THF-atom9" elementType="O" x2="17.0661" y2="-3.8546"/> <atom id="5-METHYL-THF-atom10" elementType="C" x2="9.016" y2="-6.3212"/> <atom id="5-METHYL-THF-atom11" elementType="C" x2="9.0727" y2="-3.9396"/> <atom id="5-METHYL-THF-atom12" elementType="C" x2="10.4331" y2="-6.3212"/> <atom id="5-METHYL-THF-atom13" elementType="C" x2="10.4331" y2="-3.9396"/> <atom id="5-METHYL-THF-atom14" elementType="C" x2="15.1104" y2="-7.3415"/> <atom id="5-METHYL-THF-atom15" elementType="C" x2="15.734" y2="-6.2078"/> <atom id="5-METHYL-THF-atom16" elementType="C" x2="7.032" y2="-2.8626"/> <atom id="5-METHYL-THF-atom17" elementType="C" x2="5.9834" y2="-0.8219"/> <atom id="5-METHYL-THF-atom18" elementType="N" x2="2.383" y2="-0.1134"/> <atom id="5-METHYL-THF-atom19" elementType="N" x2="7.032" y2="-5.1016"/> <atom id="5-METHYL-THF-atom20" elementType="N" x2="4.8213" y2="-0.1134"/> <atom id="5-METHYL-THF-atom21" elementType="N" x2="13.75" y2="-5.1016"/> <atom id="5-METHYL-THF-atom22" elementType="C" x2="15.8473" y2="-8.5035"/> <atom id="5-METHYL-THF-atom23" elementType="C" x2="15.6773" y2="-3.8546"/> <atom id="5-METHYL-THF-atom24" elementType="C" x2="12.2754" y2="-4.308"/> <atom id="5-METHYL-THF-atom25" elementType="C" x2="8.3358" y2="-5.1016"/> <atom id="5-METHYL-THF-atom26" elementType="C" x2="1.221" y2="-0.8219"/> <atom id="5-METHYL-THF-atom27" elementType="C" x2="11.085" y2="-5.1592"/> <atom id="5-METHYL…

unificationXref27026
type: unificationXref
DB: CapCyc
ID: 5-METHYL-THF

unificationXref27025
type: unificationXref
DB: CAS
ID: 134-35-0

unificationXref27024
type: unificationXref
DB: LIGAND
ID: C00440

unificationXref27022
type: unificationXref
DB: CapCyc
ID: RXN-6301

unificationXref27040
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-22

catalysis27034
type: catalysis
CONTROLLED: biochemicalReaction27021
CONTROLLER: phys-ent-participant27038
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27035

unificationXref27035
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-54

catalysis27029
type: catalysis
CONTROLLED: biochemicalReaction27021
CONTROLLER: phys-ent-participant27033
NAME: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE S-METHYLTRANSFERASE
XREF: unificationXref27030

unificationXref27030
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-736

catalysis27010
type: catalysis
CONTROLLED: biochemicalReaction27004
CONTROLLER: phys-ent-participant27014
NAME: MAGNESIUM-PROTOPORPHYRIN IX METHYLTRANSFERASE
XREF: unificationXref27011

biochemicalReaction27004
type: biochemicalReaction
EC-NUMBER: 2.1.1.11
LEFT: phys-ent-participant20955
LEFT: phys-ent-participant23319
NAME: Magnesium-protoporphyrin O-methyltransferase
RIGHT: phys-ent-participant24031
RIGHT: phys-ent-participant27009
XREF: unificationXref27005

phys-ent-participant20955
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20952
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20952
type: smallMolecule
MOLECULAR-WEIGHT: 584.956
NAME: Mg-protoporphyrin
STRUCTURE: chemicalStructure20954
SYNONYMS: Mg-protoporphyrin IX
SYNONYMS: Mg-protoporphyrin
SYNONYMS: magnesium protoporphyrin
XREF: unificationXref20953

chemicalStructure20954
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MG-PROTOPORPHYRIN-atom1" elementType="C" x2="1.7047" y2="-0.0239"/> <atom id="MG-PROTOPORPHYRIN-atom2" elementType="C" x2="0.8399" y2="0.9929"/> <atom id="MG-PROTOPORPHYRIN-atom3" elementType="C" x2="1.6028" y2="1.307"/> <atom id="MG-PROTOPORPHYRIN-atom4" elementType="C" x2="2.1372" y2="0.6786"/> <atom id="MG-PROTOPORPHYRIN-atom5" elementType="C" x2="-1.903" y2="0.7977"/> <atom id="MG-PROTOPORPHYRIN-atom6" elementType="C" x2="-1.3324" y2="1.3935"/> <atom id="MG-PROTOPORPHYRIN-atom7" elementType="C" x2="-0.5894" y2="1.035"/> <atom id="MG-PROTOPORPHYRIN-atom8" elementType="C" x2="-1.5126" y2="0.0709"/> <atom id="MG-PROTOPORPHYRIN-atom9" elementType="C" x2="0.1374" y2="1.4254"/> <atom id="MG-PROTOPORPHYRIN-atom10" elementType="C" x2="-1.5462" y2="-1.4915"/> <atom id="MG-PROTOPORPHYRIN-atom11" elementType="C" x2="-0.6655" y2="-2.4945"/> <atom id="MG-PROTOPORPHYRIN-atom12" elementType="C" x2="-1.4233" y2="-2.8206"/> <atom id="MG-PROTOPORPHYRIN-atom13" elementType="C" x2="-1.9676" y2="-2.2008"/> <atom id="MG-PROTOPORPHYRIN-atom14" elementType="C" x2="2.074" y2="-2.2559"/> <atom id="MG-PROTOPORPHYRIN-atom15" elementType="C" x2="1.5129" y2="-2.8607"/> <atom id="MG-PROTOPORPHYRIN-atom16" elementType="C" x2="0.7643" y2="-2.514"/> <atom id="MG-PROTOPORPHYRIN-atom17" elementType="C" x2="1.6721" y2="-1.5354"/> <atom id="MG-PROTOPORPHYRIN-atom18" elementType="C" x2="0.0438" y2="-2.9159"/> <atom id="MG-PROTOPORPHYRIN-atom19" elementType="C" x2="2.0188" y2="-0.7868"/> <atom id="MG-PROTOPORPHYRIN-atom20" elementType="C" x2="-1.8711" y2="-0.6722"/> <atom id="MG-PROTOPORPHYRIN-atom21" elementType="C" x2="2.9598" y2="0.7416"/> <atom id="MG-PROTOPORPHYRIN-atom22" elementType="C" x2="2.8931" y2="-2.3543"/> <atom id="MG-PROTOPORPHYRIN-atom23" elementType="C" x2="3.2174" y2="-3.1129"/> <atom id="MG-PROTOPORPHYRIN-atom24" elementType="C" x2="1.6724" y2="-3.6702"/> <atom id="MG-PROTOPORPHYRIN-atom25" elementType="C" x2="-1.6048" y2="-3.6254"/> <atom id="MG-PROTOPORPHYRIN-atom26" el…

unificationXref20953
type: unificationXref
DB: CapCyc
ID: MG-PROTOPORPHYRIN

phys-ent-participant27009
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule27006
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule27006
type: smallMolecule
MOLECULAR-WEIGHT: 598.983
NAME: Mg-protoporphyrin monomethyl ester
STRUCTURE: chemicalStructure27008
SYNONYMS: magnesium-protoporphyrin IX 13-monomethyl ester
SYNONYMS: Mg-protoporphyrin monomethyl ester
SYNONYMS: magnesium protoporphyrin monomethyl ester
SYNONYMS: MgPMME
XREF: unificationXref27007

chemicalStructure27008
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom1" elementType="C" x2="1.7047" y2="-0.0239"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom2" elementType="C" x2="0.8399" y2="0.9929"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom3" elementType="C" x2="1.6028" y2="1.307"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom4" elementType="C" x2="2.1372" y2="0.6786"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom5" elementType="C" x2="-1.903" y2="0.7977"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom6" elementType="C" x2="-1.3324" y2="1.3935"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom7" elementType="C" x2="-0.5894" y2="1.035"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom8" elementType="C" x2="-1.5126" y2="0.0709"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom9" elementType="C" x2="0.1374" y2="1.4254"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom10" elementType="C" x2="-1.5462" y2="-1.4915"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom11" elementType="C" x2="-0.6655" y2="-2.4945"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom12" elementType="C" x2="-1.4233" y2="-2.8206"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom13" elementType="C" x2="-1.9676" y2="-2.2008"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom14" elementType="C" x2="2.074" y2="-2.2559"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom15" elementType="C" x2="1.5129" y2="-2.8607"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom16" elementType="C" x2="0.7643" y2="-2.514"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom17" elementType="C" x2="1.6721" y2="-1.5354"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom18" elementType="C" x2="0.0438" y2="-2.9159"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom19" elementType="C" x2="2.0188" y2="-0.7868"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom20" elementType="C" x2="-1.8711" y2="-0.6722"/> <atom id="MG-PROTOPORPHYRIN-MONOMETHYL-ESTER-atom21" elementType="C" x2="2.9598" y2="0.7416"/…

unificationXref27007
type: unificationXref
DB: CapCyc
ID: MG-PROTOPORPHYRIN-MONOMETHYL-ESTER

unificationXref27005
type: unificationXref
DB: CapCyc
ID: RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN

phys-ent-participant27014
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein27012
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein27012
type: protein
NAME: MAGNESIUM-PROTOPORPHYRIN IX METHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref27013

unificationXref27013
type: unificationXref
DB: CapCyc
ID: SGNU204094-MONOMER

unificationXref27011
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-665

catalysis26981
type: catalysis
CONTROLLED: biochemicalReaction26964
CONTROLLER: phys-ent-participant26985
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
XREF: unificationXref26982

biochemicalReaction26964
type: biochemicalReaction
EC-NUMBER: 2.1.2.1
LEFT: phys-ent-participant26970
LEFT: phys-ent-participant21192
LEFT: phys-ent-participant20951
NAME: Glycine hydroxymethyltransferase
RIGHT: phys-ent-participant22612
RIGHT: phys-ent-participant21212
SYNONYMS: Serine hydroxymethylase
SYNONYMS: Threonine aldolase
SYNONYMS: Serine aldolase
SYNONYMS: Serine hydroxymethyltransferase
XREF: unificationXref26965

unificationXref26965
type: unificationXref
DB: CapCyc
ID: GLYOHMETRANS-RXN

phys-ent-participant26985
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26983
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26983
type: protein
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26984

unificationXref26984
type: unificationXref
DB: CapCyc
ID: SGNU197881-MONOMER

unificationXref26982
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-237

catalysis26976
type: catalysis
CONTROLLED: biochemicalReaction26964
CONTROLLER: phys-ent-participant26980
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
XREF: unificationXref26977

phys-ent-participant26980
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26978
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26978
type: protein
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26979

unificationXref26979
type: unificationXref
DB: CapCyc
ID: SGNU204394-MONOMER

unificationXref26977
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-681

catalysis26971
type: catalysis
CONTROLLED: biochemicalReaction26964
CONTROLLER: phys-ent-participant26975
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
XREF: unificationXref26972

phys-ent-participant26975
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26973
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26973
type: protein
NAME: GLYCINE HYDROXYMETHYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26974

unificationXref26974
type: unificationXref
DB: CapCyc
ID: SGNU204501-MONOMER

unificationXref26972
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-690

catalysis26959
type: catalysis
CONTROLLED: biochemicalReaction26957
CONTROLLER: phys-ent-participant26963
NAME: Aspartate carbamoyltransferase
XREF: unificationXref26960

biochemicalReaction26957
type: biochemicalReaction
EC-NUMBER: 2.1.3.2
LEFT: phys-ent-participant21246
LEFT: phys-ent-participant21143
NAME: Aspartate carbamoyltransferase
RIGHT: phys-ent-participant23886
RIGHT: phys-ent-participant20970
SYNONYMS: ATCase
SYNONYMS: Carbamylaspartotranskinase
SYNONYMS: Aspartate transcarbamylase
XREF: unificationXref26958

phys-ent-participant21246
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21241
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21241
type: smallMolecule
MOLECULAR-WEIGHT: 133.104
NAME: L-aspartate
STRUCTURE: chemicalStructure21245
SYNONYMS: L-aspartic acid
SYNONYMS: aspartic acid
SYNONYMS: D
SYNONYMS: aspartate
SYNONYMS: asp
XREF: unificationXref21244
XREF: unificationXref21243
XREF: unificationXref21242

chemicalStructure21245
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-ASPARTATE-atom1" elementType="O" x2="-1.0" y2="-0.07317072"/> <atom id="L-ASPARTATE-atom2" elementType="N" x2="0.24661255" y2="-1.0"/> <atom id="L-ASPARTATE-atom3" elementType="O" x2="0.99729" y2="-0.93495935"/> <atom id="L-ASPARTATE-atom4" elementType="O" x2="-0.25745255" y2="0.3577236"/> <atom id="L-ASPARTATE-atom5" elementType="H" x2="0.24661255" y2="-0.0027099848"/> <atom id="L-ASPARTATE-atom6" elementType="C" x2="-0.25745255" y2="-0.50406504"/> <atom id="L-ASPARTATE-atom7" elementType="C" x2="0.7506776" y2="-0.50406504"/> <atom id="L-ASPARTATE-atom8" elementType="C" x2="-0.50406504" y2="-0.07317072"/> <atom id="L-ASPARTATE-atom9" elementType="C" x2="0.24661255" y2="-0.50406504"/> <atom id="L-ASPARTATE-atom10" elementType="O" x2="0.99729" y2="-0.07317072"/> <bond id="L-ASPARTATE-bond1" atomRefs="L-ASPARTATE-atom10 L-ASPARTATE-atom7" order="2"/> <bond id="L-ASPARTATE-bond2" atomRefs="L-ASPARTATE-atom9 L-ASPARTATE-atom5" order="1"/> <bond id="L-ASPARTATE-bond3" atomRefs="L-ASPARTATE-atom9 L-ASPARTATE-atom2" order="1"/> <bond id="L-ASPARTATE-bond4" atomRefs="L-ASPARTATE-atom9 L-ASPARTATE-atom6" order="1"/> <bond id="L-ASPARTATE-bond5" atomRefs="L-ASPARTATE-atom8 L-ASPARTATE-atom6" order="1"/> <bond id="L-ASPARTATE-bond6" atomRefs="L-ASPARTATE-atom7 L-ASPARTATE-atom9" order="1"/> <bond id="L-ASPARTATE-bond7" atomRefs="L-ASPARTATE-atom4 L-ASPARTATE-atom8" order="1"/> <bond id="L-ASPARTATE-bond8" atomRefs="L-ASPARTATE-atom3 L-ASPARTATE-atom7" order="1"/> <bond id="L-ASPARTATE-bond9" atomRefs="L-ASPARTATE-atom1 L-ASPARTATE-atom8" order="2"/> <formula concise="C 4 H 7 N 1 O 4" formalCharge="0"/> 133.104 C(O)(=O)[CH](N)CC(O)=O

unificationXref21244
type: unificationXref
DB: CapCyc
ID: L-ASPARTATE

unificationXref21243
type: unificationXref
DB: CAS
ID: 56-84-8

unificationXref21242
type: unificationXref
DB: LIGAND
ID: C00049

phys-ent-participant21143
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21138
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21138
type: smallMolecule
MOLECULAR-WEIGHT: 141.02
NAME: carbamoyl-phosphate
STRUCTURE: chemicalStructure21142
SYNONYMS: carbamoyl-P
SYNONYMS: carbamyl-phosphate
XREF: unificationXref21141
XREF: unificationXref21140
XREF: unificationXref21139

chemicalStructure21142
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBAMOYL-P-atom1" elementType="N" x2="-1.0" y2="-0.49123"/> <atom id="CARBAMOYL-P-atom2" elementType="P" x2="0.48772" y2="-0.49123"/> <atom id="CARBAMOYL-P-atom3" elementType="O" x2="0.99649" y2="-0.49123"/> <atom id="CARBAMOYL-P-atom4" elementType="O" x2="0.48772" y2="0.01754"/> <atom id="CARBAMOYL-P-atom5" elementType="O" x2="-0.02105" y2="-0.49123"/> <atom id="CARBAMOYL-P-atom6" elementType="O" x2="0.48772" y2="-1.0"/> <atom id="CARBAMOYL-P-atom7" elementType="C" x2="-0.49123" y2="-0.49123"/> <atom id="CARBAMOYL-P-atom8" elementType="O" x2="-0.49123" y2="0.01754"/> <bond id="CARBAMOYL-P-bond1" atomRefs="CARBAMOYL-P-atom8 CARBAMOYL-P-atom7" order="2"/> <bond id="CARBAMOYL-P-bond2" atomRefs="CARBAMOYL-P-atom7 CARBAMOYL-P-atom5" order="1"/> <bond id="CARBAMOYL-P-bond3" atomRefs="CARBAMOYL-P-atom6 CARBAMOYL-P-atom2" order="1"/> <bond id="CARBAMOYL-P-bond4" atomRefs="CARBAMOYL-P-atom5 CARBAMOYL-P-atom2" order="1"/> <bond id="CARBAMOYL-P-bond5" atomRefs="CARBAMOYL-P-atom4 CARBAMOYL-P-atom2" order="2"/> <bond id="CARBAMOYL-P-bond6" atomRefs="CARBAMOYL-P-atom3 CARBAMOYL-P-atom2" order="1"/> <bond id="CARBAMOYL-P-bond7" atomRefs="CARBAMOYL-P-atom1 CARBAMOYL-P-atom7" order="1"/> <formula concise="C 1 H 4 N 1 O 5 P 1" formalCharge="0"/> 141.02 C(N)(=O)OP(=O)(O)O

unificationXref21141
type: unificationXref
DB: CapCyc
ID: CARBAMOYL-P

unificationXref21140
type: unificationXref
DB: CAS
ID: 590-55-6

unificationXref21139
type: unificationXref
DB: LIGAND
ID: C00169

phys-ent-participant23886
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23881
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23881
type: smallMolecule
MOLECULAR-WEIGHT: 176.129
NAME: carbamoyl-L-aspartate
STRUCTURE: chemicalStructure23885
SYNONYMS: carbamyul-L-aspartate
SYNONYMS: N-carbamoyl-L-aspartate
SYNONYMS: carbamyul-aspartate
SYNONYMS: carbamoyl-aspartate
SYNONYMS: carbamyl-aspartate
SYNONYMS: carbamyl-L-aspartate
XREF: unificationXref23884
XREF: unificationXref23883
XREF: unificationXref23882

chemicalStructure23885
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBAMYUL-L-ASPARTATE-atom1" elementType="C" x2="-0.62438" y2="-0.57166"/> <atom id="CARBAMYUL-L-ASPARTATE-atom2" elementType="O" x2="0.99671" y2="-0.14333"/> <atom id="CARBAMYUL-L-ASPARTATE-atom3" elementType="O" x2="0.99341" y2="-1.0"/> <atom id="CARBAMYUL-L-ASPARTATE-atom4" elementType="C" x2="0.74959" y2="-0.57166"/> <atom id="CARBAMYUL-L-ASPARTATE-atom5" elementType="O" x2="-1.0" y2="-0.89127"/> <atom id="CARBAMYUL-L-ASPARTATE-atom6" elementType="O" x2="-0.95058" y2="-0.19605"/> <atom id="CARBAMYUL-L-ASPARTATE-atom7" elementType="O" x2="-0.06425" y2="0.80231"/> <atom id="CARBAMYUL-L-ASPARTATE-atom8" elementType="N" x2="0.27512" y2="-0.07414"/> <atom id="CARBAMYUL-L-ASPARTATE-atom9" elementType="C" x2="-0.19275" y2="-0.57166"/> <atom id="CARBAMYUL-L-ASPARTATE-atom10" elementType="N" x2="0.62768" y2="0.78913"/> <atom id="CARBAMYUL-L-ASPARTATE-atom11" elementType="C" x2="0.27512" y2="0.44316"/> <atom id="CARBAMYUL-L-ASPARTATE-atom12" elementType="C" x2="0.27512" y2="-0.57166"/> <bond id="CARBAMYUL-L-ASPARTATE-bond1" atomRefs="CARBAMYUL-L-ASPARTATE-atom12 CARBAMYUL-L-ASPARTATE-atom9" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond2" atomRefs="CARBAMYUL-L-ASPARTATE-atom12 CARBAMYUL-L-ASPARTATE-atom8" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond3" atomRefs="CARBAMYUL-L-ASPARTATE-atom11 CARBAMYUL-L-ASPARTATE-atom10" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond4" atomRefs="CARBAMYUL-L-ASPARTATE-atom8 CARBAMYUL-L-ASPARTATE-atom11" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond5" atomRefs="CARBAMYUL-L-ASPARTATE-atom7 CARBAMYUL-L-ASPARTATE-atom11" order="2"/> <bond id="CARBAMYUL-L-ASPARTATE-bond6" atomRefs="CARBAMYUL-L-ASPARTATE-atom6 CARBAMYUL-L-ASPARTATE-atom1" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond7" atomRefs="CARBAMYUL-L-ASPARTATE-atom5 CARBAMYUL-L-ASPARTATE-atom1" order="2"/> <bond id="CARBAMYUL-L-ASPARTATE-bond8" atomRefs="CARBAMYUL-L-ASPARTATE-atom4 CARBAMYUL-L-ASPARTATE-atom12" order="1"/> <bond id="CARBAMYUL-L-ASPARTATE-bond9" atomR…

unificationXref23884
type: unificationXref
DB: CapCyc
ID: CARBAMYUL-L-ASPARTATE

unificationXref23883
type: unificationXref
DB: CAS
ID: 16649-79-9

unificationXref23882
type: unificationXref
DB: LIGAND
ID: C00438

unificationXref26958
type: unificationXref
DB: CapCyc
ID: ASPCARBTRANS-RXN

phys-ent-participant26963
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26961
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26961
type: protein
NAME: Aspartate carbamoyltransferase
ORGANISM: bioSource20982
XREF: unificationXref26962

unificationXref26962
type: unificationXref
DB: CapCyc
ID: SGNU200293-MONOMER

unificationXref26960
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-415

catalysis26953
type: catalysis
CONTROLLED: biochemicalReaction26947
CONTROLLER: phys-ent-participant26946
NAME: TRANSKETOLASE
XREF: unificationXref26954

biochemicalReaction26947
type: biochemicalReaction
EC-NUMBER: 2.2.1.1
LEFT: phys-ent-participant21816
LEFT: phys-ent-participant22242
NAME: Transketolase
RIGHT: phys-ent-participant24444
RIGHT: phys-ent-participant22057
SYNONYMS: Glycoaldehyde transferase
XREF: unificationXref26948

phys-ent-participant21816
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21810
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21810
type: smallMolecule
MOLECULAR-WEIGHT: 230.111
NAME: D-ribose-5-phosphate
STRUCTURE: chemicalStructure21815
SYNONYMS: D-ribose-5-phosphate
SYNONYMS: D-ribose-5-phosphoric acid
SYNONYMS: ribose-5-phosphoric acid
SYNONYMS: ribose-5P
SYNONYMS: D-ribose-5-P
SYNONYMS: ribose-5-P
SYNONYMS: ribose-5-phosphate
XREF: unificationXref21814
XREF: unificationXref21813
XREF: unificationXref21812
XREF: unificationXref21811

chemicalStructure21815
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref21814
type: unificationXref
DB: CapCyc
ID: RIBOSE-5P

unificationXref21813
type: unificationXref
DB: CAS
ID: 4300-28-1

unificationXref21812
type: unificationXref
DB: LIGAND
ID: C00117

unificationXref21811
type: unificationXref
DB: PubChem
ID: 439167

phys-ent-participant22242
type: physicalEntityParticipant
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smallMolecule22237
type: smallMolecule
MOLECULAR-WEIGHT: 230.111
NAME: D-xylulose-5-phosphate
STRUCTURE: chemicalStructure22241
SYNONYMS: xylulose-5-phosphate
SYNONYMS: xylulose-phosphate
SYNONYMS: D-xylulose-5-P
SYNONYMS: xylulose-P
XREF: unificationXref22240
XREF: unificationXref22239
XREF: unificationXref22238

chemicalStructure22241
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="XYLULOSE-5-PHOSPHATE-atom1" elementType="O" x2="-0.12263" y2="-0.33333"/> <atom id="XYLULOSE-5-PHOSPHATE-atom2" elementType="O" x2="0.99655" y2="0.56131"/> <atom id="XYLULOSE-5-PHOSPHATE-atom3" elementType="C" x2="-0.56131" y2="-0.63385"/> <atom id="XYLULOSE-5-PHOSPHATE-atom4" elementType="P" x2="0.55786" y2="0.56131"/> <atom id="XYLULOSE-5-PHOSPHATE-atom5" elementType="C" x2="-0.56131" y2="0.56131"/> <atom id="XYLULOSE-5-PHOSPHATE-atom6" elementType="C" x2="-0.56131" y2="0.25389"/> <atom id="XYLULOSE-5-PHOSPHATE-atom7" elementType="C" x2="-0.56131" y2="-0.04318"/> <atom id="XYLULOSE-5-PHOSPHATE-atom8" elementType="O" x2="0.55786" y2="1.0"/> <atom id="XYLULOSE-5-PHOSPHATE-atom9" elementType="O" x2="-0.12263" y2="-0.63385"/> <atom id="XYLULOSE-5-PHOSPHATE-atom10" elementType="O" x2="0.55786" y2="0.12263"/> <atom id="XYLULOSE-5-PHOSPHATE-atom11" elementType="C" x2="-0.56131" y2="-0.33333"/> <atom id="XYLULOSE-5-PHOSPHATE-atom12" elementType="O" x2="-0.12263" y2="0.25389"/> <atom id="XYLULOSE-5-PHOSPHATE-atom13" elementType="O" x2="-1.0" y2="-0.04318"/> <atom id="XYLULOSE-5-PHOSPHATE-atom14" elementType="O" x2="0.00864" y2="0.56131"/> <bond id="XYLULOSE-5-PHOSPHATE-bond1" atomRefs="XYLULOSE-5-PHOSPHATE-atom14 XYLULOSE-5-PHOSPHATE-atom4" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE-bond2" atomRefs="XYLULOSE-5-PHOSPHATE-atom13 XYLULOSE-5-PHOSPHATE-atom7" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE-bond3" atomRefs="XYLULOSE-5-PHOSPHATE-atom12 XYLULOSE-5-PHOSPHATE-atom6" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE-bond4" atomRefs="XYLULOSE-5-PHOSPHATE-atom11 XYLULOSE-5-PHOSPHATE-atom7" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE-bond5" atomRefs="XYLULOSE-5-PHOSPHATE-atom10 XYLULOSE-5-PHOSPHATE-atom4" order="2"/> <bond id="XYLULOSE-5-PHOSPHATE-bond6" atomRefs="XYLULOSE-5-PHOSPHATE-atom9 XYLULOSE-5-PHOSPHATE-atom3" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE-bond7" atomRefs="XYLULOSE-5-PHOSPHATE-atom8 XYLULOSE-5-PHOSPHATE-atom4" order="1"/> <bond id="XYLULOSE-5-PHOSPHATE…

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type: unificationXref
DB: CapCyc
ID: XYLULOSE-5-PHOSPHATE

unificationXref22239
type: unificationXref
DB: CAS
ID: 60802-29-1

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ID: C00231

phys-ent-participant24444
type: physicalEntityParticipant
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smallMolecule24439
type: smallMolecule
MOLECULAR-WEIGHT: 290.163
NAME: D-sedoheptulose-7-phosphate
STRUCTURE: chemicalStructure24443
SYNONYMS: D-Sedoheptulose-7-P
SYNONYMS: sedoheptulose-7-phosphate
SYNONYMS: heptulose-7-phosphate
SYNONYMS: sedoheptulose-7-P
XREF: unificationXref24442
XREF: unificationXref24441
XREF: unificationXref24440

chemicalStructure24443
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="D-SEDOHEPTULOSE-7-P-atom1" elementType="C" x2="-1.7713" y2="1.7682"/> <atom id="D-SEDOHEPTULOSE-7-P-atom2" elementType="O" x2="0.6682" y2="0.737"/> <atom id="D-SEDOHEPTULOSE-7-P-atom3" elementType="O" x2="-0.7398" y2="-0.5545"/> <atom id="D-SEDOHEPTULOSE-7-P-atom4" elementType="P" x2="0.6682" y2="1.7682"/> <atom id="D-SEDOHEPTULOSE-7-P-atom5" elementType="C" x2="-1.7713" y2="1.0868"/> <atom id="D-SEDOHEPTULOSE-7-P-atom6" elementType="C" x2="-1.7713" y2="0.2705"/> <atom id="D-SEDOHEPTULOSE-7-P-atom7" elementType="C" x2="-1.7713" y2="-0.5545"/> <atom id="D-SEDOHEPTULOSE-7-P-atom8" elementType="O" x2="-0.7579" y2="-2.0073"/> <atom id="D-SEDOHEPTULOSE-7-P-atom9" elementType="O" x2="-2.8205" y2="-1.3617"/> <atom id="D-SEDOHEPTULOSE-7-P-atom10" elementType="C" x2="-1.7713" y2="-2.8323"/> <atom id="D-SEDOHEPTULOSE-7-P-atom11" elementType="O" x2="-0.3543" y2="1.7682"/> <atom id="D-SEDOHEPTULOSE-7-P-atom12" elementType="C" x2="-1.7713" y2="-1.3617"/> <atom id="D-SEDOHEPTULOSE-7-P-atom13" elementType="O" x2="0.6682" y2="2.7997"/> <atom id="D-SEDOHEPTULOSE-7-P-atom14" elementType="O" x2="1.6994" y2="1.7682"/> <atom id="D-SEDOHEPTULOSE-7-P-atom15" elementType="C" x2="-1.7713" y2="-2.0073"/> <atom id="D-SEDOHEPTULOSE-7-P-atom16" elementType="O" x2="-0.7398" y2="1.0868"/> <atom id="D-SEDOHEPTULOSE-7-P-atom17" elementType="O" x2="-0.7579" y2="-2.8323"/> <atom id="D-SEDOHEPTULOSE-7-P-atom18" elementType="O" x2="-0.7398" y2="0.2705"/> <bond id="D-SEDOHEPTULOSE-7-P-bond1" atomRefs="D-SEDOHEPTULOSE-7-P-atom1 D-SEDOHEPTULOSE-7-P-atom11" order="1"/> <bond id="D-SEDOHEPTULOSE-7-P-bond2" atomRefs="D-SEDOHEPTULOSE-7-P-atom2 D-SEDOHEPTULOSE-7-P-atom4" order="2"/> <bond id="D-SEDOHEPTULOSE-7-P-bond3" atomRefs="D-SEDOHEPTULOSE-7-P-atom3 D-SEDOHEPTULOSE-7-P-atom7" order="1"/> <bond id="D-SEDOHEPTULOSE-7-P-bond4" atomRefs="D-SEDOHEPTULOSE-7-P-atom5 D-SEDOHEPTULOSE-7-P-atom1" order="1"/> <bond id="D-SEDOHEPTULOSE-7-P-bond5" atomRefs="D-SEDOHEPTULOSE-7-P-atom6 D-SEDOHEPTULOSE-7-P-atom5"…

unificationXref24442
type: unificationXref
DB: CapCyc
ID: D-SEDOHEPTULOSE-7-P

unificationXref24441
type: unificationXref
DB: CAS
ID: 2646-35-7

unificationXref24440
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DB: LIGAND
ID: C00281

unificationXref26948
type: unificationXref
DB: CapCyc
ID: 1TRANSKETO-RXN

phys-ent-participant26946
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PHYSICAL-ENTITY: protein26944
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26944
type: protein
NAME: TRANSKETOLASE
ORGANISM: bioSource20982
XREF: unificationXref26945

unificationXref26945
type: unificationXref
DB: CapCyc
ID: SGNU196330-MONOMER

unificationXref26954
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-39

catalysis26951
type: catalysis
CONTROLLED: biochemicalReaction26947
CONTROLLER: phys-ent-participant26941
NAME: TRANSKETOLASE
XREF: unificationXref26952

phys-ent-participant26941
type: physicalEntityParticipant
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CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26939
type: protein
NAME: TRANSKETOLASE
ORGANISM: bioSource20982
XREF: unificationXref26940

unificationXref26940
type: unificationXref
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ID: SGNU196331-MONOMER

unificationXref26952
type: unificationXref
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catalysis26949
type: catalysis
CONTROLLED: biochemicalReaction26947
CONTROLLER: phys-ent-participant26936
NAME: TRANSKETOLASE
XREF: unificationXref26950

phys-ent-participant26936
type: physicalEntityParticipant
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CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26934
type: protein
NAME: TRANSKETOLASE
ORGANISM: bioSource20982
XREF: unificationXref26935

unificationXref26935
type: unificationXref
DB: CapCyc
ID: SGNU196928-MONOMER

unificationXref26950
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-122

catalysis26942
type: catalysis
CONTROLLED: biochemicalReaction26930
CONTROLLER: phys-ent-participant26946
NAME: TRANSKETOLASE
XREF: unificationXref26943

biochemicalReaction26930
type: biochemicalReaction
EC-NUMBER: 2.2.1.1
LEFT: phys-ent-participant23169
LEFT: phys-ent-participant22242
NAME: Transketolase
RIGHT: phys-ent-participant22081
RIGHT: phys-ent-participant22057
SYNONYMS: Glycoaldehyde transferase
XREF: unificationXref26931

phys-ent-participant23169
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23164
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23164
type: smallMolecule
MOLECULAR-WEIGHT: 200.085
NAME: D-erythrose-4-phosphate
STRUCTURE: chemicalStructure23168
SYNONYMS: erythrose-4P
SYNONYMS: threose 4-phosphate
SYNONYMS: erythrose-4-phosphate
SYNONYMS: erythrose-4-P
SYNONYMS: D-erythrose-4-P
XREF: unificationXref23167
XREF: unificationXref23166
XREF: unificationXref23165

chemicalStructure23168
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ERYTHROSE-4P-atom1" elementType="O" x2="0.29338" y2="1.0"/> <atom id="ERYTHROSE-4P-atom2" elementType="O" x2="-0.52681" y2="-0.99685"/> <atom id="ERYTHROSE-4P-atom3" elementType="P" x2="0.29338" y2="0.47003"/> <atom id="ERYTHROSE-4P-atom4" elementType="C" x2="-1.0" y2="-0.36593"/> <atom id="ERYTHROSE-4P-atom5" elementType="C" x2="-1.0" y2="0.05047"/> <atom id="ERYTHROSE-4P-atom6" elementType="O" x2="-0.29653" y2="0.47003"/> <atom id="ERYTHROSE-4P-atom7" elementType="C" x2="-1.0" y2="-0.76656"/> <atom id="ERYTHROSE-4P-atom8" elementType="O" x2="0.82334" y2="0.47003"/> <atom id="ERYTHROSE-4P-atom9" elementType="C" x2="-1.0" y2="0.47003"/> <atom id="ERYTHROSE-4P-atom10" elementType="O" x2="-0.47003" y2="-0.36593"/> <atom id="ERYTHROSE-4P-atom11" elementType="O" x2="-0.47003" y2="0.05047"/> <atom id="ERYTHROSE-4P-atom12" elementType="O" x2="0.29338" y2="-0.05994"/> <bond id="ERYTHROSE-4P-bond1" atomRefs="ERYTHROSE-4P-atom12 ERYTHROSE-4P-atom3" order="2"/> <bond id="ERYTHROSE-4P-bond2" atomRefs="ERYTHROSE-4P-atom11 ERYTHROSE-4P-atom5" order="1"/> <bond id="ERYTHROSE-4P-bond3" atomRefs="ERYTHROSE-4P-atom10 ERYTHROSE-4P-atom4" order="1"/> <bond id="ERYTHROSE-4P-bond4" atomRefs="ERYTHROSE-4P-atom9 ERYTHROSE-4P-atom6" order="1"/> <bond id="ERYTHROSE-4P-bond5" atomRefs="ERYTHROSE-4P-atom8 ERYTHROSE-4P-atom3" order="1"/> <bond id="ERYTHROSE-4P-bond6" atomRefs="ERYTHROSE-4P-atom7 ERYTHROSE-4P-atom4" order="1"/> <bond id="ERYTHROSE-4P-bond7" atomRefs="ERYTHROSE-4P-atom6 ERYTHROSE-4P-atom3" order="1"/> <bond id="ERYTHROSE-4P-bond8" atomRefs="ERYTHROSE-4P-atom5 ERYTHROSE-4P-atom9" order="1"/> <bond id="ERYTHROSE-4P-bond9" atomRefs="ERYTHROSE-4P-atom4 ERYTHROSE-4P-atom5" order="1"/> <bond id="ERYTHROSE-4P-bond10" atomRefs="ERYTHROSE-4P-atom2 ERYTHROSE-4P-atom7" order="2"/> <bond id="ERYTHROSE-4P-bond11" atomRefs="ERYTHROSE-4P-atom1 ERYTHROSE-4P-atom3" order="1"/> <formula concise="C 4 H 9 O 7 P 1" formalCharge="0"/> 200.085 C(=O)C(O)C(O)COP(O)(=O)O

unificationXref23167
type: unificationXref
DB: CapCyc
ID: ERYTHROSE-4P

unificationXref23166
type: unificationXref
DB: CAS
ID: 585-18-2

unificationXref23165
type: unificationXref
DB: LIGAND
ID: C00279

phys-ent-participant22081
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22076
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22076
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: D-fructose-6-phosphate
STRUCTURE: chemicalStructure22080
SYNONYMS: fructose-6P
SYNONYMS: fructose-6-P
SYNONYMS: fruc6p
SYNONYMS: fru-6-P
SYNONYMS: fructose-6-phosphate
SYNONYMS: A-D-fructose-6-P
SYNONYMS: D-fructose-6-P
XREF: unificationXref22079
XREF: unificationXref22078
XREF: unificationXref22077

chemicalStructure22080
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FRUCTOSE-6P-atom1" elementType="O" x2="1.4089" y2="-2.9043"/> <atom id="FRUCTOSE-6P-atom2" elementType="O" x2="8.4892" y2="-4.0867"/> <atom id="FRUCTOSE-6P-atom3" elementType="O" x2="4.0316" y2="0.0"/> <atom id="FRUCTOSE-6P-atom4" elementType="O" x2="7.0774" y2="0.0"/> <atom id="FRUCTOSE-6P-atom5" elementType="O" x2="8.0186" y2="-2.8967"/> <atom id="FRUCTOSE-6P-atom6" elementType="O" x2="0.0" y2="-4.2847"/> <atom id="FRUCTOSE-6P-atom7" elementType="O" x2="1.438" y2="-5.7038"/> <atom id="FRUCTOSE-6P-atom8" elementType="C" x2="7.1198" y2="-3.7956"/> <atom id="FRUCTOSE-6P-atom9" elementType="C" x2="3.0904" y2="-2.8967"/> <atom id="FRUCTOSE-6P-atom10" elementType="O" x2="2.7993" y2="-4.2661"/> <atom id="FRUCTOSE-6P-atom11" elementType="O" x2="5.5545" y2="-3.287"/> <atom id="FRUCTOSE-6P-atom12" elementType="C" x2="4.8545" y2="-1.1326"/> <atom id="FRUCTOSE-6P-atom13" elementType="C" x2="4.4219" y2="-2.4641"/> <atom id="FRUCTOSE-6P-atom14" elementType="C" x2="6.2545" y2="-1.1326"/> <atom id="FRUCTOSE-6P-atom15" elementType="C" x2="6.6871" y2="-2.4641"/> <atom id="FRUCTOSE-6P-atom16" elementType="P" x2="1.3999" y2="-4.3043"/> <bond id="FRUCTOSE-6P-bond1" atomRefs="FRUCTOSE-6P-atom14 FRUCTOSE-6P-atom15" order="1"/> <bond id="FRUCTOSE-6P-bond2" atomRefs="FRUCTOSE-6P-atom12 FRUCTOSE-6P-atom14" order="1"/> <bond id="FRUCTOSE-6P-bond3" atomRefs="FRUCTOSE-6P-atom12 FRUCTOSE-6P-atom13" order="1"/> <bond id="FRUCTOSE-6P-bond4" atomRefs="FRUCTOSE-6P-atom11 FRUCTOSE-6P-atom15" order="1"/> <bond id="FRUCTOSE-6P-bond5" atomRefs="FRUCTOSE-6P-atom11 FRUCTOSE-6P-atom13" order="1"/> <bond id="FRUCTOSE-6P-bond6" atomRefs="FRUCTOSE-6P-atom10 FRUCTOSE-6P-atom16" order="1"/> <bond id="FRUCTOSE-6P-bond7" atomRefs="FRUCTOSE-6P-atom13 FRUCTOSE-6P-atom9" order="1"/> <bond id="FRUCTOSE-6P-bond8" atomRefs="FRUCTOSE-6P-atom9 FRUCTOSE-6P-atom10" order="1"/> <bond id="FRUCTOSE-6P-bond9" atomRefs="FRUCTOSE-6P-atom15 FRUCTOSE-6P-atom8" order="1"/> <bond id="FRUCTOSE-6P-bond10" atomRefs="FRUCTOS…

unificationXref22079
type: unificationXref
DB: CapCyc
ID: FRUCTOSE-6P

unificationXref22078
type: unificationXref
DB: CAS
ID: 643-13-0

unificationXref22077
type: unificationXref
DB: LIGAND
ID: C00085

unificationXref26931
type: unificationXref
DB: CapCyc
ID: 2TRANSKETO-RXN

unificationXref26943
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-40

catalysis26937
type: catalysis
CONTROLLED: biochemicalReaction26930
CONTROLLER: phys-ent-participant26941
NAME: TRANSKETOLASE
XREF: unificationXref26938

unificationXref26938
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-42

catalysis26932
type: catalysis
CONTROLLED: biochemicalReaction26930
CONTROLLER: phys-ent-participant26936
NAME: TRANSKETOLASE
XREF: unificationXref26933

unificationXref26933
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-123

catalysis26928
type: catalysis
CONTROLLED: biochemicalReaction26915
CONTROLLER: phys-ent-participant26914
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26929

biochemicalReaction26915
type: biochemicalReaction
EC-NUMBER: 2.2.1.6
LEFT: phys-ent-participant26917
NAME: Acetolactate synthase
RIGHT: phys-ent-participant26923
RIGHT: phys-ent-participant21166
XREF: unificationXref26916

phys-ent-participant26917
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20884
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule20884
type: smallMolecule
MOLECULAR-WEIGHT: 88.063
NAME: pyruvate
STRUCTURE: chemicalStructure20890
SYNONYMS: BTS
SYNONYMS: α-ketopropionic acid
SYNONYMS: acetylformic acid
SYNONYMS: pyroracemic acid
SYNONYMS: 2-oxopropanoic acid
SYNONYMS: pyruvic acid
SYNONYMS: 2-oxopropanoate
SYNONYMS: 2-oxo-propionic acid
XREF: unificationXref20889
XREF: unificationXref20888
XREF: unificationXref20887
XREF: unificationXref20886
XREF: unificationXref20885

chemicalStructure20890
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRUVATE-atom1" elementType="C" x2="0.36301" y2="-0.2363"/> <atom id="PYRUVATE-atom2" elementType="C" x2="-1.0" y2="-0.2774"/> <atom id="PYRUVATE-atom3" elementType="O" x2="-0.34247" y2="0.87329"/> <atom id="PYRUVATE-atom4" elementType="C" x2="-0.34247" y2="0.10959"/> <atom id="PYRUVATE-atom5" elementType="O" x2="0.36301" y2="-1.0"/> <atom id="PYRUVATE-atom6" elementType="O" x2="0.99658" y2="0.18836"/> <bond id="PYRUVATE-bond1" atomRefs="PYRUVATE-atom6 PYRUVATE-atom1" order="1"/> <bond id="PYRUVATE-bond2" atomRefs="PYRUVATE-atom5 PYRUVATE-atom1" order="2"/> <bond id="PYRUVATE-bond3" atomRefs="PYRUVATE-atom4 PYRUVATE-atom1" order="1"/> <bond id="PYRUVATE-bond4" atomRefs="PYRUVATE-atom3 PYRUVATE-atom4" order="2"/> <bond id="PYRUVATE-bond5" atomRefs="PYRUVATE-atom2 PYRUVATE-atom4" order="1"/> <formula concise="C 3 H 4 O 3" formalCharge="0"/> 88.063 C(=O)(O)C(=O)C

unificationXref20889
type: unificationXref
DB: CapCyc
ID: PYRUVATE

unificationXref20888
type: unificationXref
DB: UMBBD
ID: c0159

unificationXref20887
type: unificationXref
DB: LIGAND
ID: c00022

unificationXref20886
type: unificationXref
DB: CAS
ID: 127-17-3

unificationXref20885
type: unificationXref
DB: LIGAND
ID: C00022

unificationXref26916
type: unificationXref
DB: CapCyc
ID: ACETOLACTSYN-RXN

phys-ent-participant26914
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26912
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26912
type: protein
NAME: ACETOLACTATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26913

unificationXref26913
type: unificationXref
DB: CapCyc
ID: SGNU196237-MONOMER

unificationXref26929
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-17

catalysis26926
type: catalysis
CONTROLLED: biochemicalReaction26915
CONTROLLER: phys-ent-participant26909
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26927

phys-ent-participant26909
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26907
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26907
type: protein
NAME: ACETOLACTATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26908

unificationXref26908
type: unificationXref
DB: CapCyc
ID: SGNU203711-MONOMER

unificationXref26927
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-635

catalysis26924
type: catalysis
CONTROLLED: biochemicalReaction26915
CONTROLLER: phys-ent-participant26904
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26925

phys-ent-participant26904
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26902
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26902
type: protein
NAME: ACETOLACTATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26903

unificationXref26903
type: unificationXref
DB: CapCyc
ID: SGNU199050-MONOMER

unificationXref26925
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-733

catalysis26910
type: catalysis
CONTROLLED: biochemicalReaction26891
CONTROLLER: phys-ent-participant26914
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26911

biochemicalReaction26891
type: biochemicalReaction
EC-NUMBER: 2.2.1.6
LEFT: phys-ent-participant21010
LEFT: phys-ent-participant22437
NAME: Acetolactate synthase
RIGHT: phys-ent-participant26899
RIGHT: phys-ent-participant21166
XREF: unificationXref26892

phys-ent-participant21010
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20884
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

phys-ent-participant22437
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22432
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22432
type: smallMolecule
MOLECULAR-WEIGHT: 102.09
NAME: 2-oxobutanoate
STRUCTURE: chemicalStructure22436
SYNONYMS: 2-oxobutyrate
SYNONYMS: 2-ketobutyrate
SYNONYMS: 2-oxobutyric acid
SYNONYMS: α-oxobutyric acid
SYNONYMS: α-ketobutyrate
SYNONYMS: α-ketobutyric acid
SYNONYMS: 2-oxo-butyrate
SYNONYMS: 2-keto-butyrate
SYNONYMS: 2-ketobutyric acid
XREF: unificationXref22435
XREF: unificationXref22434
XREF: unificationXref22433

chemicalStructure22436
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-OXOBUTANOATE-atom1" elementType="O" x2="-0.01113" y2="0.22099"/> <atom id="2-OXOBUTANOATE-atom2" elementType="C" x2="-0.59936" y2="-0.53259"/> <atom id="2-OXOBUTANOATE-atom3" elementType="O" x2="0.55803" y2="-1.0"/> <atom id="2-OXOBUTANOATE-atom4" elementType="C" x2="-0.01113" y2="-0.24642"/> <atom id="2-OXOBUTANOATE-atom5" elementType="O" x2="0.99682" y2="-0.37043"/> <atom id="2-OXOBUTANOATE-atom6" elementType="C" x2="0.55803" y2="-0.53259"/> <atom id="2-OXOBUTANOATE-atom7" elementType="C" x2="-1.0" y2="-0.29412"/> <bond id="2-OXOBUTANOATE-bond1" atomRefs="2-OXOBUTANOATE-atom7 2-OXOBUTANOATE-atom2" order="1"/> <bond id="2-OXOBUTANOATE-bond2" atomRefs="2-OXOBUTANOATE-atom6 2-OXOBUTANOATE-atom3" order="2"/> <bond id="2-OXOBUTANOATE-bond3" atomRefs="2-OXOBUTANOATE-atom6 2-OXOBUTANOATE-atom5" order="1"/> <bond id="2-OXOBUTANOATE-bond4" atomRefs="2-OXOBUTANOATE-atom4 2-OXOBUTANOATE-atom1" order="2"/> <bond id="2-OXOBUTANOATE-bond5" atomRefs="2-OXOBUTANOATE-atom4 2-OXOBUTANOATE-atom6" order="1"/> <bond id="2-OXOBUTANOATE-bond6" atomRefs="2-OXOBUTANOATE-atom2 2-OXOBUTANOATE-atom4" order="1"/> <formula concise="C 4 H 6 O 3" formalCharge="0"/> 102.09 C(O)(=O)C(=O)CC 2-oxobutanoic acid

unificationXref22435
type: unificationXref
DB: CapCyc
ID: 2-OXOBUTANOATE

unificationXref22434
type: unificationXref
DB: CAS
ID: 600-18-0

unificationXref22433
type: unificationXref
DB: LIGAND
ID: C00109

unificationXref26892
type: unificationXref
DB: CapCyc
ID: ACETOOHBUTSYN-RXN

unificationXref26911
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-18

catalysis26905
type: catalysis
CONTROLLED: biochemicalReaction26891
CONTROLLER: phys-ent-participant26909
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26906

unificationXref26906
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-636

catalysis26900
type: catalysis
CONTROLLED: biochemicalReaction26891
CONTROLLER: phys-ent-participant26904
NAME: ACETOLACTATE SYNTHASE
XREF: unificationXref26901

unificationXref26901
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-734

catalysis26882
type: catalysis
CONTROLLED: biochemicalReaction26865
CONTROLLER: phys-ent-participant26886
NAME: TRANSALDOLASE
XREF: unificationXref26883

biochemicalReaction26865
type: biochemicalReaction
EC-NUMBER: 2.2.1.2
LEFT: phys-ent-participant22057
LEFT: phys-ent-participant24444
NAME: Transaldolase
RIGHT: phys-ent-participant22081
RIGHT: phys-ent-participant23169
SYNONYMS: Glycerone transferase
SYNONYMS: Dihydroxyacetone transferase
XREF: unificationXref26866

unificationXref26866
type: unificationXref
DB: CapCyc
ID: TRANSALDOL-RXN

phys-ent-participant26886
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26884
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26884
type: protein
NAME: TRANSALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26885

unificationXref26885
type: unificationXref
DB: CapCyc
ID: SGNU197865-MONOMER

unificationXref26883
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-234

catalysis26877
type: catalysis
CONTROLLED: biochemicalReaction26865
CONTROLLER: phys-ent-participant26881
NAME: TRANSALDOLASE
XREF: unificationXref26878

phys-ent-participant26881
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26879
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26879
type: protein
NAME: TRANSALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26880

unificationXref26880
type: unificationXref
DB: CapCyc
ID: SGNU198367-MONOMER

unificationXref26878
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-289

catalysis26872
type: catalysis
CONTROLLED: biochemicalReaction26865
CONTROLLER: phys-ent-participant26876
NAME: TRANSALDOLASE
XREF: unificationXref26873

phys-ent-participant26876
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26874
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26874
type: protein
NAME: TRANSALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26875

unificationXref26875
type: unificationXref
DB: CapCyc
ID: SGNU198675-MONOMER

unificationXref26873
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-320

catalysis26867
type: catalysis
CONTROLLED: biochemicalReaction26865
CONTROLLER: phys-ent-participant26871
NAME: TRANSALDOLASE
XREF: unificationXref26868

phys-ent-participant26871
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26869
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26869
type: protein
NAME: TRANSALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26870

unificationXref26870
type: unificationXref
DB: CapCyc
ID: SGNU202073-MONOMER

unificationXref26868
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-545

catalysis26841
type: catalysis
CONTROLLED: biochemicalReaction26834
CONTROLLER: phys-ent-participant26845
NAME: 8-AMINO-7-OXONONANOATE SYNTHASE
XREF: unificationXref26842

biochemicalReaction26834
type: biochemicalReaction
EC-NUMBER: 2.3.1.47
LEFT: phys-ent-participant23613
LEFT: phys-ent-participant26840
NAME: 8-amino-7-oxononanoate synthase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant21436
RIGHT: phys-ent-participant25803
SYNONYMS: 8-amino-7-ketopelargonate synthase
SYNONYMS: AONS
SYNONYMS: 7-KAP synthase
SYNONYMS: 7-keto-8-amino-pelargonic acid synthase
XREF: unificationXref26835

phys-ent-participant23613
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23607
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23607
type: smallMolecule
MOLECULAR-WEIGHT: 89.094
NAME: L-alanine
STRUCTURE: chemicalStructure23612
SYNONYMS: alanine
SYNONYMS: L-α-alanine
XREF: unificationXref23611
XREF: unificationXref23610
XREF: unificationXref23609
XREF: unificationXref23608

chemicalStructure23612
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-ALPHA-ALANINE-atom1" elementType="C" x2="-0.23128" y2="0.33111"/> <atom id="L-ALPHA-ALANINE-atom2" elementType="C" x2="-0.23461" y2="-1.0"/> <atom id="L-ALPHA-ALANINE-atom3" elementType="O" x2="0.15474" y2="0.99667"/> <atom id="L-ALPHA-ALANINE-atom4" elementType="O" x2="-1.0" y2="0.33111"/> <atom id="L-ALPHA-ALANINE-atom5" elementType="C" x2="0.15474" y2="-0.33444"/> <atom id="L-ALPHA-ALANINE-atom6" elementType="N" x2="0.92346" y2="-0.33444"/> <bond id="L-ALPHA-ALANINE-bond1" atomRefs="L-ALPHA-ALANINE-atom6 L-ALPHA-ALANINE-atom5" order="1"/> <bond id="L-ALPHA-ALANINE-bond2" atomRefs="L-ALPHA-ALANINE-atom5 L-ALPHA-ALANINE-atom1" order="1"/> <bond id="L-ALPHA-ALANINE-bond3" atomRefs="L-ALPHA-ALANINE-atom4 L-ALPHA-ALANINE-atom1" order="2"/> <bond id="L-ALPHA-ALANINE-bond4" atomRefs="L-ALPHA-ALANINE-atom3 L-ALPHA-ALANINE-atom1" order="1"/> <bond id="L-ALPHA-ALANINE-bond5" atomRefs="L-ALPHA-ALANINE-atom2 L-ALPHA-ALANINE-atom5" order="1"/> <formula concise="C 3 H 7 N 1 O 2" formalCharge="0"/> 89.094 C(O)(=O)C(N)C

unificationXref23611
type: unificationXref
DB: CapCyc
ID: L-ALPHA-ALANINE

unificationXref23610
type: unificationXref
DB: CAS
ID: 56-41-7

unificationXref23609
type: unificationXref
DB: CAS
ID: 6898-94-8

unificationXref23608
type: unificationXref
DB: LIGAND
ID: C00041

phys-ent-participant26840
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26836
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26836
type: smallMolecule
MOLECULAR-WEIGHT: 909.688
NAME: pimeloyl-CoA
STRUCTURE: chemicalStructure26839
SYNONYMS: 6-carboxyhexanoyl-CoA
XREF: unificationXref26838
XREF: unificationXref26837

chemicalStructure26839
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="6-CARBOXYHEXANOYL-COA-atom1" elementType="C" x2="6.4458" y2="2.9667"/> <atom id="6-CARBOXYHEXANOYL-COA-atom2" elementType="C" x2="7.0954" y2="3.3417"/> <atom id="6-CARBOXYHEXANOYL-COA-atom3" elementType="C" x2="7.7449" y2="2.9667"/> <atom id="6-CARBOXYHEXANOYL-COA-atom4" elementType="C" x2="8.3944" y2="3.3417"/> <atom id="6-CARBOXYHEXANOYL-COA-atom5" elementType="C" x2="5.7963" y2="3.3417"/> <atom id="6-CARBOXYHEXANOYL-COA-atom6" elementType="C" x2="9.0439" y2="2.9667"/> <atom id="6-CARBOXYHEXANOYL-COA-atom7" elementType="O" x2="9.0414" y2="2.2168"/> <atom id="6-CARBOXYHEXANOYL-COA-atom8" elementType="O" x2="9.6923" y2="3.3439"/> <atom id="6-CARBOXYHEXANOYL-COA-atom9" elementType="O" x2="-0.5336" y2="-0.4747"/> <atom id="6-CARBOXYHEXANOYL-COA-atom10" elementType="O" x2="-2.872" y2="0.227"/> <atom id="6-CARBOXYHEXANOYL-COA-atom11" elementType="C" x2="0.0866" y2="-0.0262"/> <atom id="6-CARBOXYHEXANOYL-COA-atom12" elementType="C" x2="-0.1405" y2="0.6784"/> <atom id="6-CARBOXYHEXANOYL-COA-atom13" elementType="C" x2="-0.906" y2="0.6784"/> <atom id="6-CARBOXYHEXANOYL-COA-atom14" elementType="C" x2="-1.1441" y2="-0.0372"/> <atom id="6-CARBOXYHEXANOYL-COA-atom15" elementType="C" x2="-1.8464" y2="-0.258"/> <atom id="6-CARBOXYHEXANOYL-COA-atom16" elementType="P" x2="-4.0686" y2="0.2406"/> <atom id="6-CARBOXYHEXANOYL-COA-atom17" elementType="O" x2="-4.08" y2="-0.4926"/> <atom id="6-CARBOXYHEXANOYL-COA-atom18" elementType="O" x2="-4.8228" y2="0.2277"/> <atom id="6-CARBOXYHEXANOYL-COA-atom19" elementType="O" x2="-4.0738" y2="1.8739"/> <atom id="6-CARBOXYHEXANOYL-COA-atom20" elementType="O" x2="-3.2922" y2="3.3419"/> <atom id="6-CARBOXYHEXANOYL-COA-atom21" elementType="P" x2="-4.0728" y2="3.3573"/> <atom id="6-CARBOXYHEXANOYL-COA-atom22" elementType="O" x2="-4.8269" y2="3.3444"/> <atom id="6-CARBOXYHEXANOYL-COA-atom23" elementType="O" x2="-4.0655" y2="4.0948"/> <atom id="6-CARBOXYHEXANOYL-COA-atom24" elementType="C" x2="-2.6453" y2="2.9683"/> <atom id="6-CARBOXYHEXANOYL…

unificationXref26838
type: unificationXref
DB: CapCyc
ID: 6-CARBOXYHEXANOYL-COA

unificationXref26837
type: unificationXref
DB: LIGAND
ID: C01063

phys-ent-participant25803
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25799
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25799
type: smallMolecule
MOLECULAR-WEIGHT: 187.238
NAME: 8-amino-7-oxononanoate
STRUCTURE: chemicalStructure25802
SYNONYMS: 7-keto-8-aminopelargonate
SYNONYMS: KAPA
SYNONYMS: 7-KAP
XREF: unificationXref25801
XREF: unificationXref25800

chemicalStructure25802
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="8-AMINO-7-OXONONANOATE-atom1" elementType="C" x2="1.95" y2="5.3"/> <atom id="8-AMINO-7-OXONONANOATE-atom2" elementType="C" x2="2.5995" y2="4.925"/> <atom id="8-AMINO-7-OXONONANOATE-atom3" elementType="C" x2="3.249" y2="5.3"/> <atom id="8-AMINO-7-OXONONANOATE-atom4" elementType="O" x2="2.5995" y2="4.175"/> <atom id="8-AMINO-7-OXONONANOATE-atom5" elementType="N" x2="1.3005" y2="4.925"/> <atom id="8-AMINO-7-OXONONANOATE-atom6" elementType="C" x2="1.95" y2="6.05"/> <atom id="8-AMINO-7-OXONONANOATE-atom7" elementType="C" x2="3.8986" y2="4.925"/> <atom id="8-AMINO-7-OXONONANOATE-atom8" elementType="C" x2="4.5481" y2="5.3"/> <atom id="8-AMINO-7-OXONONANOATE-atom9" elementType="C" x2="5.1976" y2="4.925"/> <atom id="8-AMINO-7-OXONONANOATE-atom10" elementType="C" x2="5.8471" y2="5.3"/> <atom id="8-AMINO-7-OXONONANOATE-atom11" elementType="C" x2="6.4966" y2="4.925"/> <atom id="8-AMINO-7-OXONONANOATE-atom12" elementType="O" x2="7.1448" y2="5.3021"/> <atom id="8-AMINO-7-OXONONANOATE-atom13" elementType="O" x2="6.4942" y2="4.1749"/> <bond id="8-AMINO-7-OXONONANOATE-bond1" atomRefs="8-AMINO-7-OXONONANOATE-atom10 8-AMINO-7-OXONONANOATE-atom11" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond2" atomRefs="8-AMINO-7-OXONONANOATE-atom11 8-AMINO-7-OXONONANOATE-atom13" order="2"/> <bond id="8-AMINO-7-OXONONANOATE-bond3" atomRefs="8-AMINO-7-OXONONANOATE-atom11 8-AMINO-7-OXONONANOATE-atom12" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond4" atomRefs="8-AMINO-7-OXONONANOATE-atom9 8-AMINO-7-OXONONANOATE-atom10" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond5" atomRefs="8-AMINO-7-OXONONANOATE-atom8 8-AMINO-7-OXONONANOATE-atom9" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond6" atomRefs="8-AMINO-7-OXONONANOATE-atom7 8-AMINO-7-OXONONANOATE-atom8" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond7" atomRefs="8-AMINO-7-OXONONANOATE-atom3 8-AMINO-7-OXONONANOATE-atom7" order="1"/> <bond id="8-AMINO-7-OXONONANOATE-bond8" atomRefs="8-AMINO-7-OXONONANOATE-atom1 8-AMINO-7-OXONONANOATE…

unificationXref25801
type: unificationXref
DB: CapCyc
ID: 8-AMINO-7-OXONONANOATE

unificationXref25800
type: unificationXref
DB: LIGAND
ID: C01092

unificationXref26835
type: unificationXref
DB: CapCyc
ID: 7KAPSYN-RXN

phys-ent-participant26845
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26843
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26843
type: protein
NAME: 8-AMINO-7-OXONONANOATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26844

unificationXref26844
type: unificationXref
DB: CapCyc
ID: SGNU200375-MONOMER

unificationXref26842
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-421

catalysis26829
type: catalysis
CONTROLLED: biochemicalReaction26826
CONTROLLER: phys-ent-participant26833
NAME: ACETYL-COA C-ACETYLTRANSFERASE
XREF: unificationXref26830

biochemicalReaction26826
type: biochemicalReaction
EC-NUMBER: 2.3.1.9
LEFT: phys-ent-participant26828
NAME: Acetyl-CoA C-acetyltransferase
RIGHT: phys-ent-participant24827
RIGHT: phys-ent-participant21436
SYNONYMS: ACETYL-COENZYME A ACETYLTRANSFERASE 2
SYNONYMS: Acetoacetyl-CoA thiolase
XREF: unificationXref26827

phys-ent-participant26828
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21043
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant24827
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24822
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24822
type: smallMolecule
MOLECULAR-WEIGHT: 851.608
NAME: acetoacetyl-CoA
STRUCTURE: chemicalStructure24826
SYNONYMS: acetoacetyl-S-CoA
XREF: unificationXref24825
XREF: unificationXref24824
XREF: unificationXref24823

chemicalStructure24826
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACETOACETYL-COA-atom1" elementType="H" x2="11.9159" y2="-6.9425"/> <atom id="ACETOACETYL-COA-atom2" elementType="H" x2="13.9606" y2="-6.1852"/> <atom id="ACETOACETYL-COA-atom3" elementType="H" x2="14.4654" y2="-6.9425"/> <atom id="ACETOACETYL-COA-atom4" elementType="H" x2="12.4207" y2="-6.1852"/> <atom id="ACETOACETYL-COA-atom5" elementType="C" x2="11.4732" y2="-11.137"/> <atom id="ACETOACETYL-COA-atom6" elementType="C" x2="3.0543" y2="-6.2104"/> <atom id="ACETOACETYL-COA-atom7" elementType="C" x2="3.0543" y2="-3.3833"/> <atom id="ACETOACETYL-COA-atom8" elementType="N" x2="12.1936" y2="0.0"/> <atom id="ACETOACETYL-COA-atom9" elementType="O" x2="10.2325" y2="-13.1965"/> <atom id="ACETOACETYL-COA-atom10" elementType="O" x2="2.7766" y2="-7.3463"/> <atom id="ACETOACETYL-COA-atom11" elementType="O" x2="7.8239" y2="-13.1012"/> <atom id="ACETOACETYL-COA-atom12" elementType="O" x2="1.035" y2="-3.3833"/> <atom id="ACETOACETYL-COA-atom13" elementType="O" x2="12.2441" y2="-10.6286"/> <atom id="ACETOACETYL-COA-atom14" elementType="O" x2="6.8162" y2="-3.1814"/> <atom id="ACETOACETYL-COA-atom15" elementType="O" x2="9.3404" y2="-3.1814"/> <atom id="ACETOACETYL-COA-atom16" elementType="O" x2="2.0699" y2="-6.8162"/> <atom id="ACETOACETYL-COA-atom17" elementType="O" x2="13.9606" y2="-7.9017"/> <atom id="ACETOACETYL-COA-atom18" elementType="O" x2="13.6576" y2="-12.0421"/> <atom id="ACETOACETYL-COA-atom19" elementType="O" x2="15.0712" y2="-10.6286"/> <atom id="ACETOACETYL-COA-atom20" elementType="O" x2="6.8162" y2="-6.0085"/> <atom id="ACETOACETYL-COA-atom21" elementType="O" x2="9.3404" y2="-6.0085"/> <atom id="ACETOACETYL-COA-atom22" elementType="C" x2="11.1579" y2="-3.2823"/> <atom id="ACETOACETYL-COA-atom23" elementType="C" x2="15.2731" y2="-2.6512"/> <atom id="ACETOACETYL-COA-atom24" elementType="C" x2="5.5036" y2="-8.558"/> <atom id="ACETOACETYL-COA-atom25" elementType="C" x2="0.0" y2="-8.7606"/> <atom id="ACETOACETYL-COA-atom26" elementType="C" x2="6.6648" y2="-9.5432"/…

unificationXref24825
type: unificationXref
DB: CapCyc
ID: ACETOACETYL-COA

unificationXref24824
type: unificationXref
DB: CAS
ID: 1420-36-6

unificationXref24823
type: unificationXref
DB: LIGAND
ID: C00332

unificationXref26827
type: unificationXref
DB: CapCyc
ID: ACETYL-COA-ACETYLTRANSFER-RXN

phys-ent-participant26833
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26831
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26831
type: protein
NAME: ACETYL-COA C-ACETYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26832

unificationXref26832
type: unificationXref
DB: CapCyc
ID: SGNU204801-MONOMER

unificationXref26830
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-703

catalysis26802
type: catalysis
CONTROLLED: biochemicalReaction26783
CONTROLLER: phys-ent-participant26806
NAME: NARINGENIN-CHALCONE SYNTHASE
XREF: unificationXref26803

biochemicalReaction26783
type: biochemicalReaction
EC-NUMBER: 2.3.1.74
LEFT: phys-ent-participant21583
LEFT: phys-ent-participant26731
NAME: Naringenin-chalcone synthase
RIGHT: phys-ent-participant21702
RIGHT: phys-ent-participant26737
RIGHT: phys-ent-participant26736
SYNONYMS: 6'-deoxychalcone synthase
SYNONYMS: Flavonone synthase
SYNONYMS: Chalcone synthase
XREF: unificationXref26784

phys-ent-participant21583
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21580
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21580
type: smallMolecule
MOLECULAR-WEIGHT: 913.679
NAME: coumaroyl-CoA
STRUCTURE: chemicalStructure21582
SYNONYMS: p-coumaryl-CoA
SYNONYMS: 4-coumaroyl-CoA
XREF: unificationXref21581

chemicalStructure21582
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="COUMARYL-COA-atom1" elementType="H" x2="14.5233" y2="-6.6635"/> <atom id="COUMARYL-COA-atom2" elementType="H" x2="16.667" y2="-7.3252"/> <atom id="COUMARYL-COA-atom3" elementType="H" x2="17.1402" y2="-6.6635"/> <atom id="COUMARYL-COA-atom4" elementType="H" x2="15.0592" y2="-7.3252"/> <atom id="COUMARYL-COA-atom5" elementType="C" x2="5.3795" y2="-10.2264"/> <atom id="COUMARYL-COA-atom6" elementType="C" x2="5.3795" y2="-7.4209"/> <atom id="COUMARYL-COA-atom7" elementType="N" x2="14.8076" y2="-13.7264"/> <atom id="COUMARYL-COA-atom8" elementType="O" x2="7.246" y2="0.0"/> <atom id="COUMARYL-COA-atom9" elementType="O" x2="4.4649" y2="-6.159"/> <atom id="COUMARYL-COA-atom10" elementType="O" x2="3.2672" y2="-10.2264"/> <atom id="COUMARYL-COA-atom11" elementType="O" x2="13.6401" y2="-3.9837"/> <atom id="COUMARYL-COA-atom12" elementType="O" x2="9.2582" y2="-10.4164"/> <atom id="COUMARYL-COA-atom13" elementType="O" x2="11.8749" y2="-10.4164"/> <atom id="COUMARYL-COA-atom14" elementType="O" x2="0.0" y2="-3.9523"/> <atom id="COUMARYL-COA-atom15" elementType="O" x2="4.3705" y2="-6.7894"/> <atom id="COUMARYL-COA-atom16" elementType="O" x2="16.667" y2="-5.6859"/> <atom id="COUMARYL-COA-atom17" elementType="O" x2="16.4784" y2="-3.9837"/> <atom id="COUMARYL-COA-atom18" elementType="O" x2="15.0592" y2="-2.5961"/> <atom id="COUMARYL-COA-atom19" elementType="O" x2="9.2582" y2="-7.6097"/> <atom id="COUMARYL-COA-atom20" elementType="O" x2="11.8749" y2="-7.6097"/> <atom id="COUMARYL-COA-atom21" elementType="C" x2="5.8928" y2="-2.3135"/> <atom id="COUMARYL-COA-atom22" elementType="C" x2="4.9304" y2="-1.2968"/> <atom id="COUMARYL-COA-atom23" elementType="C" x2="13.7671" y2="-10.3836"/> <atom id="COUMARYL-COA-atom24" elementType="C" x2="1.274" y2="-1.889"/> <atom id="COUMARYL-COA-atom25" elementType="C" x2="2.4238" y2="-4.0239"/> <atom id="COUMARYL-COA-atom26" elementType="C" x2="2.5065" y2="-1.2252"/> <atom id="COUMARYL-COA-atom27" elementType="C" x2="3.6564" y2="-3.3601"/> <atom …

unificationXref21581
type: unificationXref
DB: CapCyc
ID: COUMARYL-COA

phys-ent-participant26731
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21050
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 3

smallMolecule21050
type: smallMolecule
MOLECULAR-WEIGHT: 853.581
NAME: malonyl-CoA
STRUCTURE: chemicalStructure21054
SYNONYMS: malonylCoenzyme A
XREF: unificationXref21053
XREF: unificationXref21052
XREF: unificationXref21051

chemicalStructure21054
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MALONYL-COA-atom1" elementType="C" x2="0.89073" y2="-0.32781"/> <atom id="MALONYL-COA-atom2" elementType="O" x2="0.8245" y2="-0.5596"/> <atom id="MALONYL-COA-atom3" elementType="C" x2="0.8245" y2="-0.45364"/> <atom id="MALONYL-COA-atom4" elementType="C" x2="-0.3543" y2="-0.67219"/> <atom id="MALONYL-COA-atom5" elementType="N" x2="0.61258" y2="-0.04636"/> <atom id="MALONYL-COA-atom6" elementType="C" x2="-0.87086" y2="-0.77483"/> <atom id="MALONYL-COA-atom7" elementType="O" x2="0.72848" y2="-1.0"/> <atom id="MALONYL-COA-atom8" elementType="C" x2="-0.86424" y2="-0.16225"/> <atom id="MALONYL-COA-atom9" elementType="O" x2="-0.67881" y2="-0.5"/> <atom id="MALONYL-COA-atom10" elementType="C" x2="0.99669" y2="0.11921"/> <atom id="MALONYL-COA-atom11" elementType="O" x2="0.54967" y2="-0.82119"/> <atom id="MALONYL-COA-atom12" elementType="N" x2="0.45695" y2="0.19536"/> <atom id="MALONYL-COA-atom13" elementType="S" x2="-0.06291" y2="-0.66225"/> <atom id="MALONYL-COA-atom14" elementType="O" x2="0.72185" y2="-0.2351"/> <atom id="MALONYL-COA-atom15" elementType="O" x2="-0.86424" y2="0.01656"/> <atom id="MALONYL-COA-atom16" elementType="N" x2="0.59603" y2="0.46026"/> <atom id="MALONYL-COA-atom17" elementType="C" x2="-0.67881" y2="-0.67881"/> <atom id="MALONYL-COA-atom18" elementType="C" x2="0.45695" y2="0.03642"/> <atom id="MALONYL-COA-atom19" elementType="O" x2="0.36093" y2="-0.94371"/> <atom id="MALONYL-COA-atom20" elementType="O" x2="-0.10927" y2="0.04305"/> <atom id="MALONYL-COA-atom21" elementType="O" x2="-0.31457" y2="-0.13576"/> <atom id="MALONYL-COA-atom22" elementType="C" x2="0.09272" y2="-0.77483"/> <atom id="MALONYL-COA-atom23" elementType="H" x2="0.89073" y2="-0.43377"/> <atom id="MALONYL-COA-atom24" elementType="C" x2="0.59603" y2="0.28146"/> <atom id="MALONYL-COA-atom25" elementType="O" x2="0.21854" y2="-0.31457"/> <atom id="MALONYL-COA-atom26" elementType="C" x2="-0.60265" y2="-0.16225"/> <atom id="MALONYL-COA-atom27" elementType="N" x2="0.89073" y2="-0.039…

unificationXref21053
type: unificationXref
DB: CapCyc
ID: MALONYL-COA

unificationXref21052
type: unificationXref
DB: CAS
ID: 524-14-1

unificationXref21051
type: unificationXref
DB: LIGAND
ID: C00083

phys-ent-participant21702
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21698
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21698
type: smallMolecule
MOLECULAR-WEIGHT: 271.249
NAME: naringenin chalcone
STRUCTURE: chemicalStructure21701
SYNONYMS: 2'44'6-tetrahydroxychalcone
XREF: unificationXref21700
XREF: unificationXref21699

chemicalStructure21701
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="APIGENIN-atom1" elementType="C" x2="-0.5618729" y2="-0.6086956"/> <atom id="APIGENIN-atom2" elementType="O" x2="-0.110367894" y2="0.1605351"/> <atom id="APIGENIN-atom3" elementType="O" x2="-1.0" y2="-0.6086956"/> <atom id="APIGENIN-atom4" elementType="C" x2="-0.33444816" y2="-0.48494983"/> <atom id="APIGENIN-atom5" elementType="O" x2="-0.5618729" y2="0.1605351"/> <atom id="APIGENIN-atom6" elementType="C" x2="0.11371231" y2="-0.22408026"/> <atom id="APIGENIN-atom7" elementType="C" x2="-0.7792642" y2="-0.22408026"/> <atom id="APIGENIN-atom8" elementType="C" x2="0.5551839" y2="-0.9966555"/> <atom id="APIGENIN-atom9" elementType="C" x2="-0.110367894" y2="-0.09364551"/> <atom id="APIGENIN-atom10" elementType="C" x2="-0.5618729" y2="-0.09364551"/> <atom id="APIGENIN-atom11" elementType="C" x2="0.3344481" y2="-0.61204016"/> <atom id="APIGENIN-atom12" elementType="C" x2="-0.33444816" y2="-0.22408026"/> <atom id="APIGENIN-atom13" elementType="C" x2="-0.7792642" y2="-0.48494983"/> <atom id="APIGENIN-atom14" elementType="C" x2="0.11371231" y2="-0.48494983"/> <atom id="APIGENIN-atom15" elementType="O" x2="-0.110367894" y2="-0.61204016"/> <atom id="APIGENIN-atom16" elementType="C" x2="0.7759197" y2="-0.86956525"/> <atom id="APIGENIN-atom17" elementType="C" x2="0.3344481" y2="-0.8662207"/> <atom id="APIGENIN-atom18" elementType="C" x2="0.7792642" y2="-0.61204016"/> <atom id="APIGENIN-atom19" elementType="C" x2="0.5585284" y2="-0.4882943"/> <atom id="APIGENIN-atom20" elementType="O" x2="0.99665546" y2="-1.0"/> <bond id="APIGENIN-bond1" atomRefs="APIGENIN-atom19 APIGENIN-atom11" order="A"/> <bond id="APIGENIN-bond2" atomRefs="APIGENIN-atom18 APIGENIN-atom19" order="A"/> <bond id="APIGENIN-bond3" atomRefs="APIGENIN-atom17 APIGENIN-atom8" order="A"/> <bond id="APIGENIN-bond4" atomRefs="APIGENIN-atom16 APIGENIN-atom20" order="1"/> <bond id="APIGENIN-bond5" atomRefs="APIGENIN-atom16 APIGENIN-atom18" order="A"/> <bond id="APIGENIN-bond6" atomRefs="APIGENIN-atom14 APIGENIN-atom…

unificationXref21700
type: unificationXref
DB: CapCyc
ID: APIGENIN

unificationXref21699
type: unificationXref
DB: CAS
ID: 520-36-5

phys-ent-participant26737
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21158
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 3

phys-ent-participant26736
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21431
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 4

unificationXref26784
type: unificationXref
DB: CapCyc
ID: NARINGENIN-CHALCONE-SYNTHASE-RXN

phys-ent-participant26806
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26804
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26804
type: protein
NAME: NARINGENIN-CHALCONE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26805

unificationXref26805
type: unificationXref
DB: CapCyc
ID: SGNU196649-MONOMER

unificationXref26803
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-80

catalysis26797
type: catalysis
CONTROLLED: biochemicalReaction26783
CONTROLLER: phys-ent-participant26801
NAME: NARINGENIN-CHALCONE SYNTHASE
XREF: unificationXref26798

phys-ent-participant26801
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26799
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26799
type: protein
NAME: NARINGENIN-CHALCONE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26800

unificationXref26800
type: unificationXref
DB: CapCyc
ID: SGNU198142-MONOMER

unificationXref26798
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-267

catalysis26792
type: catalysis
CONTROLLED: biochemicalReaction26783
CONTROLLER: phys-ent-participant26796
NAME: NARINGENIN-CHALCONE SYNTHASE
XREF: unificationXref26793

phys-ent-participant26796
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26794
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26794
type: protein
NAME: NARINGENIN-CHALCONE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26795

unificationXref26795
type: unificationXref
DB: CapCyc
ID: SGNU198804-MONOMER

unificationXref26793
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-329

catalysis26790
type: catalysis
CONTROLLED: biochemicalReaction26783
CONTROLLER: phys-ent-participant26742
NAME: CHALCONE SYNTHASE
XREF: unificationXref26791

phys-ent-participant26742
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26740
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26740
type: protein
NAME: CHALCONE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26741

unificationXref26741
type: unificationXref
DB: CapCyc
ID: SGNU202509-MONOMER

unificationXref26791
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-568

catalysis26785
type: catalysis
CONTROLLED: biochemicalReaction26783
CONTROLLER: phys-ent-participant26789
NAME: NARINGENIN-CHALCONE SYNTHASE
XREF: unificationXref26786

phys-ent-participant26789
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26787
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26787
type: protein
NAME: NARINGENIN-CHALCONE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26788

unificationXref26788
type: unificationXref
DB: CapCyc
ID: SGNU203568-MONOMER

unificationXref26786
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-628

catalysis26767
type: catalysis
CONTROLLED: biochemicalReaction26743
CONTROLLER: phys-ent-participant26742
NAME: CHALCONE SYNTHASE
XREF: unificationXref26768

biochemicalReaction26743
type: biochemicalReaction
EC-NUMBER: 2.3.1.170
LEFT: phys-ent-participant21583
LEFT: phys-ent-participant26731
LEFT: phys-ent-participant26753
NAME: RXN-3142
RIGHT: phys-ent-participant26757
RIGHT: phys-ent-participant26736
RIGHT: phys-ent-participant26737
RIGHT: phys-ent-participant26766
RIGHT: phys-ent-participant20951
XREF: unificationXref26744

phys-ent-participant26757
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26754
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26754
type: smallMolecule
MOLECULAR-WEIGHT: 256.257
NAME: isoliquiritigenin
STRUCTURE: chemicalStructure26756
SYNONYMS: 42'4'-trihydroxychalcone
XREF: unificationXref26755

chemicalStructure26756
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-3041-atom1" elementType="O" x2="-1.0" y2="-0.6153846"/> <atom id="CPD-3041-atom2" elementType="O" x2="-0.10367894" y2="0.100334406"/> <atom id="CPD-3041-atom3" elementType="C" x2="0.13377929" y2="-0.47826087"/> <atom id="CPD-3041-atom4" elementType="C" x2="-0.33444816" y2="-0.22742474"/> <atom id="CPD-3041-atom5" elementType="C" x2="-0.8060201" y2="-0.22742474"/> <atom id="CPD-3041-atom6" elementType="C" x2="-0.8060201" y2="-0.5083612"/> <atom id="CPD-3041-atom7" elementType="C" x2="0.36454844" y2="-0.8762542"/> <atom id="CPD-3041-atom8" elementType="C" x2="0.13377929" y2="-0.2408027"/> <atom id="CPD-3041-atom9" elementType="C" x2="-0.10367894" y2="-0.09364551"/> <atom id="CPD-3041-atom10" elementType="C" x2="0.59866214" y2="-1.0"/> <atom id="CPD-3041-atom11" elementType="C" x2="0.82274246" y2="-0.5986622"/> <atom id="CPD-3041-atom12" elementType="C" x2="0.36454844" y2="-0.5986622"/> <atom id="CPD-3041-atom13" elementType="C" x2="0.82274246" y2="-0.8762542"/> <atom id="CPD-3041-atom14" elementType="C" x2="-0.57525086" y2="-0.09364551"/> <atom id="CPD-3041-atom15" elementType="C" x2="0.59866214" y2="-0.45484948"/> <atom id="CPD-3041-atom16" elementType="C" x2="-0.33444816" y2="-0.5083612"/> <atom id="CPD-3041-atom17" elementType="O" x2="0.99665546" y2="-0.9464883"/> <atom id="CPD-3041-atom18" elementType="C" x2="-0.57525086" y2="-0.6521739"/> <atom id="CPD-3041-atom19" elementType="O" x2="-0.10367894" y2="-0.6521739"/> <bond id="CPD-3041-bond1" atomRefs="CPD-3041-atom18 CPD-3041-atom6" order="A"/> <bond id="CPD-3041-bond2" atomRefs="CPD-3041-atom16 CPD-3041-atom19" order="1"/> <bond id="CPD-3041-bond3" atomRefs="CPD-3041-atom16 CPD-3041-atom18" order="A"/> <bond id="CPD-3041-bond4" atomRefs="CPD-3041-atom15 CPD-3041-atom11" order="A"/> <bond id="CPD-3041-bond5" atomRefs="CPD-3041-atom14 CPD-3041-atom4" order="A"/> <bond id="CPD-3041-bond6" atomRefs="CPD-3041-atom13 CPD-3041-atom17" order="1"/> <bond id="CPD-3041-bond7" atomRefs="CPD-3041-atom13 CPD-3041…

unificationXref26755
type: unificationXref
DB: CapCyc
ID: CPD-3041

unificationXref26744
type: unificationXref
DB: CapCyc
ID: RXN-3142

unificationXref26768
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-569

catalysis26738
type: catalysis
CONTROLLED: biochemicalReaction26729
CONTROLLER: phys-ent-participant26742
NAME: CHALCONE SYNTHASE
XREF: unificationXref26739

biochemicalReaction26729
type: biochemicalReaction
EC-NUMBER: 2.3.1.-
LEFT: phys-ent-participant26731
LEFT: phys-ent-participant26735
NAME: RXN-7645
RIGHT: phys-ent-participant21678
RIGHT: phys-ent-participant26736
RIGHT: phys-ent-participant26737
XREF: unificationXref26730

phys-ent-participant26735
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26732
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26732
type: smallMolecule
MOLECULAR-WEIGHT: 897.68
NAME: (E)-cinnamoyl-CoA
STRUCTURE: chemicalStructure26734
XREF: unificationXref26733

chemicalStructure26734
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CINNAMOYL-COA-atom1" elementType="H" x2="11.6441" y2="-6.8661"/> <atom id="CINNAMOYL-COA-atom2" elementType="H" x2="13.6604" y2="-6.098"/> <atom id="CINNAMOYL-COA-atom3" elementType="H" x2="14.1652" y2="-6.8661"/> <atom id="CINNAMOYL-COA-atom4" elementType="H" x2="12.1721" y2="-6.098"/> <atom id="CINNAMOYL-COA-atom5" elementType="C" x2="3.0012" y2="-6.0263"/> <atom id="CINNAMOYL-COA-atom6" elementType="C" x2="3.0012" y2="-3.1448"/> <atom id="CINNAMOYL-COA-atom7" elementType="N" x2="11.956" y2="0.0"/> <atom id="CINNAMOYL-COA-atom8" elementType="O" x2="10.117" y2="-7.8897"/> <atom id="CINNAMOYL-COA-atom9" elementType="O" x2="2.7372" y2="-7.0104"/> <atom id="CINNAMOYL-COA-atom10" elementType="O" x2="1.0081" y2="-3.1448"/> <atom id="CINNAMOYL-COA-atom11" elementType="O" x2="11.6441" y2="-10.4199"/> <atom id="CINNAMOYL-COA-atom12" elementType="O" x2="6.6986" y2="-3.1448"/> <atom id="CINNAMOYL-COA-atom13" elementType="O" x2="9.1471" y2="-3.1448"/> <atom id="CINNAMOYL-COA-atom14" elementType="O" x2="2.0409" y2="-6.7464"/> <atom id="CINNAMOYL-COA-atom15" elementType="O" x2="13.6604" y2="-7.8263"/> <atom id="CINNAMOYL-COA-atom16" elementType="O" x2="14.5249" y2="-10.4199"/> <atom id="CINNAMOYL-COA-atom17" elementType="O" x2="13.0846" y2="-11.8603"/> <atom id="CINNAMOYL-COA-atom18" elementType="O" x2="6.6986" y2="-6.0263"/> <atom id="CINNAMOYL-COA-atom19" elementType="O" x2="9.1471" y2="-6.0263"/> <atom id="CINNAMOYL-COA-atom20" elementType="C" x2="9.365" y2="-10.2664"/> <atom id="CINNAMOYL-COA-atom21" elementType="C" x2="8.303" y2="-11.2377"/> <atom id="CINNAMOYL-COA-atom22" elementType="C" x2="9.2334" y2="-15.4539"/> <atom id="CINNAMOYL-COA-atom23" elementType="C" x2="10.2954" y2="-14.4826"/> <atom id="CINNAMOYL-COA-atom24" elementType="C" x2="7.8612" y2="-15.0197"/> <atom id="CINNAMOYL-COA-atom25" elementType="C" x2="10.924" y2="-3.2652"/> <atom id="CINNAMOYL-COA-atom26" elementType="C" x2="9.9852" y2="-13.0772"/> <atom id="CINNAMOYL-COA-atom27" elementType="C" x…

unificationXref26733
type: unificationXref
DB: CapCyc
ID: CINNAMOYL-COA

phys-ent-participant21678
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21675
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21675
type: smallMolecule
MOLECULAR-WEIGHT: 256.257
NAME: pinocembrin chalcone
STRUCTURE: chemicalStructure21677
XREF: unificationXref21676

chemicalStructure21677
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-6993-atom1" elementType="C" x2="-3.1875" y2="0.4562"/> <atom id="CPD-6993-atom2" elementType="C" x2="-3.902" y2="1.6938"/> <atom id="CPD-6993-atom3" elementType="C" x2="-2.473" y2="0.8687"/> <atom id="CPD-6993-atom4" elementType="C" x2="-2.473" y2="1.6938"/> <atom id="CPD-6993-atom5" elementType="O" x2="-1.7586" y2="0.4562"/> <atom id="CPD-6993-atom6" elementType="C" x2="-3.902" y2="0.8687"/> <atom id="CPD-6993-atom7" elementType="C" x2="-3.1875" y2="2.1063"/> <atom id="CPD-6993-atom8" elementType="C" x2="-1.7586" y2="2.1063"/> <atom id="CPD-6993-atom9" elementType="O" x2="-4.6164" y2="0.4562"/> <atom id="CPD-6993-atom10" elementType="O" x2="-3.1875" y2="2.9313"/> <atom id="CPD-6993-atom11" elementType="O" x2="-1.7586" y2="2.9313"/> <atom id="CPD-6993-atom12" elementType="C" x2="-1.0441" y2="0.8687"/> <atom id="CPD-6993-atom13" elementType="C" x2="-0.3296" y2="0.4562"/> <atom id="CPD-6993-atom14" elementType="C" x2="0.3848" y2="-0.7813"/> <atom id="CPD-6993-atom15" elementType="C" x2="-0.3296" y2="-0.3688"/> <atom id="CPD-6993-atom16" elementType="C" x2="0.3848" y2="0.8687"/> <atom id="CPD-6993-atom17" elementType="C" x2="1.0993" y2="0.4562"/> <atom id="CPD-6993-atom18" elementType="C" x2="1.0993" y2="-0.3688"/> <atom id="CPD-6993-atom19" elementType="C" x2="-1.0441" y2="1.6938"/> <bond id="CPD-6993-bond1" atomRefs="CPD-6993-atom17 CPD-6993-atom18" order="A"/> <bond id="CPD-6993-bond2" atomRefs="CPD-6993-atom16 CPD-6993-atom17" order="A"/> <bond id="CPD-6993-bond3" atomRefs="CPD-6993-atom18 CPD-6993-atom14" order="A"/> <bond id="CPD-6993-bond4" atomRefs="CPD-6993-atom14 CPD-6993-atom15" order="A"/> <bond id="CPD-6993-bond5" atomRefs="CPD-6993-atom13 CPD-6993-atom16" order="A"/> <bond id="CPD-6993-bond6" atomRefs="CPD-6993-atom15 CPD-6993-atom13" order="A"/> <bond id="CPD-6993-bond7" atomRefs="CPD-6993-atom12 CPD-6993-atom13" order="1"/> <bond id="CPD-6993-bond8" atomRefs="CPD-6993-atom8 CPD-6993-atom11" order="2"/> <bond id="CPD-6993-bond9" atomRefs="C…

unificationXref21676
type: unificationXref
DB: CapCyc
ID: CPD-6993

unificationXref26730
type: unificationXref
DB: CapCyc
ID: RXN-7645

unificationXref26739
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-570

catalysis26724
type: catalysis
CONTROLLED: biochemicalReaction26722
CONTROLLER: phys-ent-participant26728
NAME: serine acetyltransferase
XREF: unificationXref26725

biochemicalReaction26722
type: biochemicalReaction
EC-NUMBER: 2.3.1.30
LEFT: phys-ent-participant22612
LEFT: phys-ent-participant21049
NAME: Serine O-acetyltransferase
RIGHT: phys-ent-participant26168
RIGHT: phys-ent-participant21436
XREF: unificationXref26723

phys-ent-participant26168
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26163
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26163
type: smallMolecule
MOLECULAR-WEIGHT: 147.13
NAME: O-acetyl-L-serine
STRUCTURE: chemicalStructure26167
SYNONYMS: O3-acetyl-L-serine
SYNONYMS: acetylserine
SYNONYMS: O-acetylserine
XREF: unificationXref26166
XREF: unificationXref26165
XREF: unificationXref26164

chemicalStructure26167
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACETYLSERINE-atom1" elementType="O" x2="-0.47811" y2="0.07407"/> <atom id="ACETYLSERINE-atom2" elementType="O" x2="-1.0" y2="0.47138"/> <atom id="ACETYLSERINE-atom3" elementType="H" x2="0.12121" y2="0.04377"/> <atom id="ACETYLSERINE-atom4" elementType="C" x2="0.12121" y2="-0.47811"/> <atom id="ACETYLSERINE-atom5" elementType="C" x2="-0.47811" y2="-0.47811"/> <atom id="ACETYLSERINE-atom6" elementType="C" x2="-0.47811" y2="0.99327"/> <atom id="ACETYLSERINE-atom7" elementType="O" x2="0.99663" y2="-0.02357"/> <atom id="ACETYLSERINE-atom8" elementType="C" x2="-0.47811" y2="0.47138"/> <atom id="ACETYLSERINE-atom9" elementType="C" x2="0.73737" y2="-0.47811"/> <atom id="ACETYLSERINE-atom10" elementType="O" x2="0.99663" y2="-0.93266"/> <atom id="ACETYLSERINE-atom11" elementType="N" x2="0.12121" y2="-1.0"/> <bond id="ACETYLSERINE-bond1" atomRefs="ACETYLSERINE-atom10 ACETYLSERINE-atom9" order="1"/> <bond id="ACETYLSERINE-bond2" atomRefs="ACETYLSERINE-atom8 ACETYLSERINE-atom6" order="1"/> <bond id="ACETYLSERINE-bond3" atomRefs="ACETYLSERINE-atom7 ACETYLSERINE-atom9" order="2"/> <bond id="ACETYLSERINE-bond4" atomRefs="ACETYLSERINE-atom5 ACETYLSERINE-atom4" order="1"/> <bond id="ACETYLSERINE-bond5" atomRefs="ACETYLSERINE-atom4 ACETYLSERINE-atom9" order="1"/> <bond id="ACETYLSERINE-bond6" atomRefs="ACETYLSERINE-atom4 ACETYLSERINE-atom11" order="1"/> <bond id="ACETYLSERINE-bond7" atomRefs="ACETYLSERINE-atom4 ACETYLSERINE-atom3" order="1"/> <bond id="ACETYLSERINE-bond8" atomRefs="ACETYLSERINE-atom2 ACETYLSERINE-atom8" order="2"/> <bond id="ACETYLSERINE-bond9" atomRefs="ACETYLSERINE-atom1 ACETYLSERINE-atom5" order="1"/> <bond id="ACETYLSERINE-bond10" atomRefs="ACETYLSERINE-atom1 ACETYLSERINE-atom8" order="1"/> <formula concise="C 5 H 9 N 1 O 4" formalCharge="0"/> 147.13 C([CH](N)C(O)=O)OC(C)=O

unificationXref26166
type: unificationXref
DB: CapCyc
ID: ACETYLSERINE

unificationXref26165
type: unificationXref
DB: CAS
ID: 66638-22-0

unificationXref26164
type: unificationXref
DB: LIGAND
ID: C00979

unificationXref26723
type: unificationXref
DB: CapCyc
ID: SERINE-O-ACETTRAN-RXN

phys-ent-participant26728
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26726
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26726
type: protein
NAME: serine acetyltransferase
ORGANISM: bioSource20982
XREF: unificationXref26727

unificationXref26727
type: unificationXref
DB: CapCyc
ID: SGNU204313-MONOMER

unificationXref26725
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-673

catalysis26676
type: catalysis
CONTROLLED: biochemicalReaction26669
CONTROLLER: phys-ent-participant26680
NAME: 2-ISOPROPYLMALATE SYNTHASE
XREF: unificationXref26677

biochemicalReaction26669
type: biochemicalReaction
EC-NUMBER: 2.3.3.13
LEFT: phys-ent-participant26675
LEFT: phys-ent-participant21436
NAME: 2-isopropylmalate synthase
RIGHT: phys-ent-participant22935
RIGHT: phys-ent-participant21049
RIGHT: phys-ent-participant20951
SYNONYMS: α-IPM synthase
SYNONYMS: α-isopropylmalate synthase
XREF: unificationXref26670

phys-ent-participant22935
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22930
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22930
type: smallMolecule
MOLECULAR-WEIGHT: 116.116
NAME: 2-keto-isovalerate
STRUCTURE: chemicalStructure22934
SYNONYMS: 2-oxo-3-methylbutanoate
SYNONYMS: 3-methyl-2-oxobutanoate
SYNONYMS: α-keto-isovaleric acid
SYNONYMS: α-ketoisopentanoic acid
SYNONYMS: α-keto-isovalerate
SYNONYMS: α-oxoisovalerate
SYNONYMS: α-ketovaline
SYNONYMS: 2-oxoisovalerate
SYNONYMS: 2-ketovaline
SYNONYMS: α-keto-valine
SYNONYMS: 2-oxoisopentanoate
SYNONYMS: 2-keto-3-methylbutyric acid
XREF: unificationXref22933
XREF: unificationXref22932
XREF: unificationXref22931

chemicalStructure22934
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-KETO-ISOVALERATE-atom1" elementType="O" x2="0.7373" y2="-1.2473"/> <atom id="2-KETO-ISOVALERATE-atom2" elementType="C" x2="-0.7521" y2="-1.2473"/> <atom id="2-KETO-ISOVALERATE-atom3" elementType="C" x2="-0.0272" y2="0.079"/> <atom id="2-KETO-ISOVALERATE-atom4" elementType="O" x2="-0.0272" y2="0.904"/> <atom id="2-KETO-ISOVALERATE-atom5" elementType="C" x2="-0.7521" y2="-0.4223"/> <atom id="2-KETO-ISOVALERATE-atom6" elementType="C" x2="-1.4666" y2="-0.0098"/> <atom id="2-KETO-ISOVALERATE-atom7" elementType="C" x2="0.7373" y2="-0.4223"/> <atom id="2-KETO-ISOVALERATE-atom8" elementType="O" x2="1.4517" y2="-0.0098"/> <bond id="2-KETO-ISOVALERATE-bond1" atomRefs="2-KETO-ISOVALERATE-atom7 2-KETO-ISOVALERATE-atom8" order="2"/> <bond id="2-KETO-ISOVALERATE-bond2" atomRefs="2-KETO-ISOVALERATE-atom5 2-KETO-ISOVALERATE-atom6" order="1"/> <bond id="2-KETO-ISOVALERATE-bond3" atomRefs="2-KETO-ISOVALERATE-atom3 2-KETO-ISOVALERATE-atom4" order="2"/> <bond id="2-KETO-ISOVALERATE-bond4" atomRefs="2-KETO-ISOVALERATE-atom5 2-KETO-ISOVALERATE-atom2" order="1"/> <bond id="2-KETO-ISOVALERATE-bond5" atomRefs="2-KETO-ISOVALERATE-atom7 2-KETO-ISOVALERATE-atom1" order="1"/> <bond id="2-KETO-ISOVALERATE-bond6" atomRefs="2-KETO-ISOVALERATE-atom5 2-KETO-ISOVALERATE-atom3" order="1"/> <bond id="2-KETO-ISOVALERATE-bond7" atomRefs="2-KETO-ISOVALERATE-atom7 2-KETO-ISOVALERATE-atom3" order="1"/> <formula concise="C 5 H 8 O 3" formalCharge="0"/> 116.116 CC(C)C(=O)C(=O)O

unificationXref22933
type: unificationXref
DB: CapCyc
ID: 2-KETO-ISOVALERATE

unificationXref22932
type: unificationXref
DB: CAS
ID: 759-05-7

unificationXref22931
type: unificationXref
DB: LIGAND
ID: C00141

unificationXref26670
type: unificationXref
DB: CapCyc
ID: 2-ISOPROPYLMALATESYN-RXN

phys-ent-participant26680
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26678
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26678
type: protein
NAME: 2-ISOPROPYLMALATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26679

unificationXref26679
type: unificationXref
DB: CapCyc
ID: SGNU200235-MONOMER

unificationXref26677
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-410

catalysis26660
type: catalysis
CONTROLLED: biochemicalReaction26638
CONTROLLER: phys-ent-participant26664
NAME: CITRATE SYNTHASE
XREF: unificationXref26661

biochemicalReaction26638
type: biochemicalReaction
DELTA-G: -7.7
EC-NUMBER: 2.3.3.1
LEFT: phys-ent-participant23004
LEFT: phys-ent-participant21436
NAME: Citrate (si)-synthase
RIGHT: phys-ent-participant21016
RIGHT: phys-ent-participant21049
RIGHT: phys-ent-participant20951
SYNONYMS: Oxaloacetate transacetase
SYNONYMS: Citrogenase
SYNONYMS: Citrate condensing enzyme
SYNONYMS: Condensing enzyme
SYNONYMS: citrate synthesis
XREF: unificationXref26639

phys-ent-participant23004
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22999
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22999
type: smallMolecule
MOLECULAR-WEIGHT: 192.125
NAME: citrate
STRUCTURE: chemicalStructure23003
SYNONYMS: citr
SYNONYMS: cit
SYNONYMS: citric acid
SYNONYMS: 2-hydroxy-1,2,3-propanetricarboxylic acid
XREF: unificationXref23002
XREF: unificationXref23001
XREF: unificationXref23000

chemicalStructure23003
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CIT-atom1" elementType="O" x2="-0.62098" y2="0.17428"/> <atom id="CIT-atom2" elementType="O" x2="0.6176" y2="0.20135"/> <atom id="CIT-atom3" elementType="O" x2="-1.0" y2="-0.20474"/> <atom id="CIT-atom4" elementType="C" x2="-0.022" y2="-0.45516"/> <atom id="CIT-atom5" elementType="C" x2="-0.62098" y2="-0.20474"/> <atom id="CIT-atom6" elementType="C" x2="-0.022" y2="-0.7665"/> <atom id="CIT-atom7" elementType="C" x2="-0.47885" y2="-0.45516"/> <atom id="CIT-atom8" elementType="O" x2="-0.022" y2="-0.07614"/> <atom id="CIT-atom9" elementType="O" x2="0.27919" y2="-1.0"/> <atom id="CIT-atom10" elementType="C" x2="0.36379" y2="-0.45516"/> <atom id="CIT-atom11" elementType="O" x2="0.99662" y2="-0.17766"/> <atom id="CIT-atom12" elementType="O" x2="-0.3198" y2="-1.0"/> <atom id="CIT-atom13" elementType="C" x2="0.6176" y2="-0.17766"/> <bond id="CIT-bond1" atomRefs="CIT-atom13 CIT-atom10" order="1"/> <bond id="CIT-bond2" atomRefs="CIT-atom12 CIT-atom6" order="1"/> <bond id="CIT-bond3" atomRefs="CIT-atom11 CIT-atom13" order="1"/> <bond id="CIT-bond4" atomRefs="CIT-atom10 CIT-atom4" order="1"/> <bond id="CIT-bond5" atomRefs="CIT-atom9 CIT-atom6" order="2"/> <bond id="CIT-bond6" atomRefs="CIT-atom8 CIT-atom4" order="1"/> <bond id="CIT-bond7" atomRefs="CIT-atom7 CIT-atom4" order="1"/> <bond id="CIT-bond8" atomRefs="CIT-atom6 CIT-atom4" order="1"/> <bond id="CIT-bond9" atomRefs="CIT-atom5 CIT-atom7" order="1"/> <bond id="CIT-bond10" atomRefs="CIT-atom3 CIT-atom5" order="1"/> <bond id="CIT-bond11" atomRefs="CIT-atom2 CIT-atom13" order="2"/> <bond id="CIT-bond12" atomRefs="CIT-atom1 CIT-atom5" order="2"/> <formula concise="C 6 H 8 O 7" formalCharge="0"/> 192.125 C(=O)(O)CC(C(O)=O)(O)CC(O)=O

unificationXref23002
type: unificationXref
DB: CapCyc
ID: CIT

unificationXref23001
type: unificationXref
DB: CAS
ID: 77-92-9

unificationXref23000
type: unificationXref
DB: LIGAND
ID: C00158

unificationXref26639
type: unificationXref
DB: CapCyc
ID: CITSYN-RXN

phys-ent-participant26664
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26662
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26662
type: protein
NAME: CITRATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26663

unificationXref26663
type: unificationXref
DB: CapCyc
ID: SGNU196383-MONOMER

unificationXref26661
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-51

catalysis26655
type: catalysis
CONTROLLED: biochemicalReaction26638
CONTROLLER: phys-ent-participant26659
NAME: CITRATE SYNTHASE
XREF: unificationXref26656

phys-ent-participant26659
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26657
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26657
type: protein
NAME: CITRATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26658

unificationXref26658
type: unificationXref
DB: CapCyc
ID: SGNU196609-MONOMER

unificationXref26656
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-76

catalysis26650
type: catalysis
CONTROLLED: biochemicalReaction26638
CONTROLLER: phys-ent-participant26654
NAME: CITRATE SYNTHASE
XREF: unificationXref26651

phys-ent-participant26654
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26652
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26652
type: protein
NAME: CITRATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26653

unificationXref26653
type: unificationXref
DB: CapCyc
ID: SGNU196628-MONOMER

unificationXref26651
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-77

catalysis26645
type: catalysis
CONTROLLED: biochemicalReaction26638
CONTROLLER: phys-ent-participant26649
NAME: CITRATE SYNTHASE
XREF: unificationXref26646

phys-ent-participant26649
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26647
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26647
type: protein
NAME: CITRATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26648

unificationXref26648
type: unificationXref
DB: CapCyc
ID: SGNU199507-MONOMER

unificationXref26646
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-357

catalysis26640
type: catalysis
CONTROLLED: biochemicalReaction26638
CONTROLLER: phys-ent-participant26644
NAME: CITRATE SYNTHASE
XREF: unificationXref26641

phys-ent-participant26644
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26642
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26642
type: protein
NAME: CITRATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26643

unificationXref26643
type: unificationXref
DB: CapCyc
ID: SGNU199124-MONOMER

unificationXref26641
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-742

catalysis26633
type: catalysis
CONTROLLED: biochemicalReaction26616
CONTROLLER: phys-ent-participant26637
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
XREF: unificationXref26634

biochemicalReaction26616
type: biochemicalReaction
EC-NUMBER: 4.1.3.5
LEFT: phys-ent-participant21436
LEFT: phys-ent-participant22783
NAME: Hydroxymethylglutaryl-CoA synthase
RIGHT: phys-ent-participant24827
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant21049
SYNONYMS: HMG-CoA synthase
XREF: unificationXref26617

phys-ent-participant22783
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22779
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22779
type: smallMolecule
MOLECULAR-WEIGHT: 911.661
NAME: 3-hydroxy-3-methyl-glutaryl-CoA
STRUCTURE: chemicalStructure22782
SYNONYMS: (S)-3-hydroxy-3-methylglutaryl-CoA
SYNONYMS: HMG-CoA
SYNONYMS: hydroxymethylglutaryl-CoA
SYNONYMS: 3-hydroxy-3-methylglutaryl-coenzyme A
SYNONYMS: 3-Hydroxy-3-methylglutaryl-CoA
XREF: unificationXref22781
XREF: unificationXref22780

chemicalStructure22782
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom1" elementType="C" x2="0.77667" y2="-0.31333"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom2" elementType="O" x2="0.54667" y2="-0.88"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom3" elementType="C" x2="0.71667" y2="-0.43"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom4" elementType="O" x2="0.99667" y2="-0.83"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom5" elementType="O" x2="-0.8" y2="-0.38"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom6" elementType="N" x2="0.51667" y2="-0.04667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom7" elementType="O" x2="0.14667" y2="0.04"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom8" elementType="H" x2="0.71667" y2="-0.32667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom9" elementType="C" x2="-0.87" y2="-0.15333"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom10" elementType="O" x2="0.02667" y2="-0.9"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom11" elementType="C" x2="0.87667" y2="0.10667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom12" elementType="H" x2="0.46333" y2="-0.41667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom13" elementType="N" x2="0.37" y2="0.18"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom14" elementType="N" x2="0.5" y2="0.43"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom15" elementType="O" x2="0.61667" y2="-0.22667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom16" elementType="C" x2="-0.50333" y2="-0.23"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom17" elementType="O" x2="-0.16" y2="-0.3"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom18" elementType="C" x2="0.54667" y2="-0.71"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom19" elementType="C" x2="0.02667" y2="-0.73"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom20" elementType="O" x2="-0.87" y2="0.01667"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom21" elementType="O" x2="0.30667" y2="-0.13"/> <atom id="3-HYDROXY-3-METHYL-GLUTARYL-COA-atom22" elementType="C" x2="-0.69…

unificationXref22781
type: unificationXref
DB: CapCyc
ID: 3-HYDROXY-3-METHYL-GLUTARYL-COA

unificationXref22780
type: unificationXref
DB: CAS
ID: 1553-55-5

unificationXref26617
type: unificationXref
DB: CapCyc
ID: HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN

phys-ent-participant26637
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26635
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26635
type: protein
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26636

unificationXref26636
type: unificationXref
DB: CapCyc
ID: SGNU197587-MONOMER

unificationXref26634
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-202

catalysis26628
type: catalysis
CONTROLLED: biochemicalReaction26616
CONTROLLER: phys-ent-participant26632
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
XREF: unificationXref26629

phys-ent-participant26632
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26630
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26630
type: protein
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26631

unificationXref26631
type: unificationXref
DB: CapCyc
ID: SGNU200361-MONOMER

unificationXref26629
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-419

catalysis26623
type: catalysis
CONTROLLED: biochemicalReaction26616
CONTROLLER: phys-ent-participant26627
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
XREF: unificationXref26624

phys-ent-participant26627
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26625
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26625
type: protein
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26626

unificationXref26626
type: unificationXref
DB: CapCyc
ID: SGNU205400-MONOMER

unificationXref26624
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-719

catalysis26618
type: catalysis
CONTROLLED: biochemicalReaction26616
CONTROLLER: phys-ent-participant26622
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
XREF: unificationXref26619

phys-ent-participant26622
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26620
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26620
type: protein
NAME: HYDROXYMETHYLGLUTARYL-COA SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26621

unificationXref26621
type: unificationXref
DB: CapCyc
ID: SGNU205468-MONOMER

unificationXref26619
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-722

catalysis26611
type: catalysis
CONTROLLED: biochemicalReaction26599
CONTROLLER: phys-ent-participant26615
NAME: MALATE SYNTHASE
XREF: unificationXref26612

biochemicalReaction26599
type: biochemicalReaction
EC-NUMBER: 2.3.3.9
LEFT: phys-ent-participant21533
LEFT: phys-ent-participant21436
NAME: malate synthase
RIGHT: phys-ent-participant21049
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant23094
SYNONYMS: glyoxylate transacetylase
SYNONYMS: malate condensing enzyme
SYNONYMS: glyoxylate transacetylation
SYNONYMS: glyoxylate-acetate condensation
XREF: unificationXref26600

unificationXref26600
type: unificationXref
DB: CapCyc
ID: MALSYN-RXN

phys-ent-participant26615
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26613
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26613
type: protein
NAME: MALATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26614

unificationXref26614
type: unificationXref
DB: CapCyc
ID: SGNU196393-MONOMER

unificationXref26612
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-55

catalysis26606
type: catalysis
CONTROLLED: biochemicalReaction26599
CONTROLLER: phys-ent-participant26610
NAME: MALATE SYNTHASE
XREF: unificationXref26607

phys-ent-participant26610
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26608
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26608
type: protein
NAME: MALATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26609

unificationXref26609
type: unificationXref
DB: CapCyc
ID: SGNU199084-MONOMER

unificationXref26607
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-738

catalysis26601
type: catalysis
CONTROLLED: biochemicalReaction26599
CONTROLLER: phys-ent-participant26605
NAME: MALATE SYNTHASE
XREF: unificationXref26602

phys-ent-participant26605
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26603
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26603
type: protein
NAME: MALATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26604

unificationXref26604
type: unificationXref
DB: CapCyc
ID: SGNU199085-MONOMER

unificationXref26602
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-739

catalysis26595
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26333
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26596

biochemicalReaction26583
type: biochemicalReaction
EC-NUMBER: 2.4.1.36
LEFT: phys-ent-participant26553
LEFT: phys-ent-participant21829
NAME: alpha,alpha-trehalose-phosphate synthase (GDP-forming)
RIGHT: phys-ent-participant24431
RIGHT: phys-ent-participant21290
SYNONYMS: Trehalose phosphate synthase (GDP-forming)
SYNONYMS: GDP-glucose-glucosephosphate glucosyltransferase
XREF: unificationXref26584

phys-ent-participant26553
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26550
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26550
type: smallMolecule
MOLECULAR-WEIGHT: 605.345
NAME: GDP-D-glucose
STRUCTURE: chemicalStructure26552
SYNONYMS: GDP-glucose
XREF: unificationXref26551

chemicalStructure26552
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GDP-D-GLUCOSE-atom1" elementType="H" x2="12.0762" y2="-9.5859"/> <atom id="GDP-D-GLUCOSE-atom2" elementType="N" x2="12.0784" y2="-6.8417"/> <atom id="GDP-D-GLUCOSE-atom3" elementType="O" x2="14.4435" y2="-10.9486"/> <atom id="GDP-D-GLUCOSE-atom4" elementType="O" x2="9.9982" y2="-5.6269"/> <atom id="GDP-D-GLUCOSE-atom5" elementType="O" x2="7.2654" y2="-5.6269"/> <atom id="GDP-D-GLUCOSE-atom6" elementType="O" x2="0.0" y2="-3.4301"/> <atom id="GDP-D-GLUCOSE-atom7" elementType="O" x2="1.1882" y2="-1.372"/> <atom id="GDP-D-GLUCOSE-atom8" elementType="O" x2="13.2872" y2="-2.3318"/> <atom id="GDP-D-GLUCOSE-atom9" elementType="O" x2="3.5646" y2="0.0"/> <atom id="GDP-D-GLUCOSE-atom10" elementType="O" x2="5.941" y2="-1.372"/> <atom id="GDP-D-GLUCOSE-atom11" elementType="O" x2="16.2751" y2="-2.3237"/> <atom id="GDP-D-GLUCOSE-atom12" elementType="O" x2="9.994" y2="-2.8956"/> <atom id="GDP-D-GLUCOSE-atom13" elementType="O" x2="7.2654" y2="-2.8956"/> <atom id="GDP-D-GLUCOSE-atom14" elementType="C" x2="17.7598" y2="-8.2025"/> <atom id="GDP-D-GLUCOSE-atom15" elementType="C" x2="1.1882" y2="-4.116"/> <atom id="GDP-D-GLUCOSE-atom16" elementType="C" x2="12.3822" y2="-5.1677"/> <atom id="GDP-D-GLUCOSE-atom17" elementType="N" x2="16.9594" y2="-9.3248"/> <atom id="GDP-D-GLUCOSE-atom18" elementType="N" x2="14.4473" y2="-6.821"/> <atom id="GDP-D-GLUCOSE-atom19" elementType="O" x2="11.3638" y2="-4.2582"/> <atom id="GDP-D-GLUCOSE-atom20" elementType="O" x2="3.5646" y2="-4.116"/> <atom id="GDP-D-GLUCOSE-atom21" elementType="O" x2="14.7766" y2="-5.5357"/> <atom id="GDP-D-GLUCOSE-atom22" elementType="O" x2="5.9026" y2="-4.2567"/> <atom id="GDP-D-GLUCOSE-atom23" elementType="O" x2="8.631" y2="-4.2612"/> <atom id="GDP-D-GLUCOSE-atom24" elementType="C" x2="13.2644" y2="-7.5192"/> <atom id="GDP-D-GLUCOSE-atom25" elementType="C" x2="14.4473" y2="-9.5829"/> <atom id="GDP-D-GLUCOSE-atom26" elementType="C" x2="15.6451" y2="-8.8999"/> <atom id="GDP-D-GLUCOSE-atom27" elementType="C" x2="15.6451…

unificationXref26551
type: unificationXref
DB: CapCyc
ID: GDP-D-GLUCOSE

phys-ent-participant21829
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21825
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21825
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: alpha-D-glucose-6-phosphate
STRUCTURE: chemicalStructure21828
SYNONYMS: α-glucose-6-phosphate
SYNONYMS: α-D-glucose-6-P
XREF: unificationXref21827
XREF: unificationXref21826

chemicalStructure21828
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ALPHA-GLC-6-P-atom1" elementType="O" x2="1.3935" y2="-2.1239"/> <atom id="ALPHA-GLC-6-P-atom2" elementType="O" x2="8.8478" y2="-4.2202"/> <atom id="ALPHA-GLC-6-P-atom3" elementType="O" x2="8.8512" y2="-1.4132"/> <atom id="ALPHA-GLC-6-P-atom4" elementType="O" x2="6.4136" y2="0.0"/> <atom id="ALPHA-GLC-6-P-atom5" elementType="O" x2="3.9975" y2="-1.4165"/> <atom id="ALPHA-GLC-6-P-atom6" elementType="O" x2="1.3953" y2="-4.9145"/> <atom id="ALPHA-GLC-6-P-atom7" elementType="O" x2="0.0" y2="-3.5192"/> <atom id="ALPHA-GLC-6-P-atom8" elementType="C" x2="4.0007" y2="-4.2168"/> <atom id="ALPHA-GLC-6-P-atom9" elementType="O" x2="2.7923" y2="-3.5192"/> <atom id="ALPHA-GLC-6-P-atom10" elementType="O" x2="6.4175" y2="-4.2168"/> <atom id="ALPHA-GLC-6-P-atom11" elementType="C" x2="7.6413" y2="-3.5192"/> <atom id="ALPHA-GLC-6-P-atom12" elementType="C" x2="7.6413" y2="-2.1084"/> <atom id="ALPHA-GLC-6-P-atom13" elementType="C" x2="6.4175" y2="-1.3953"/> <atom id="ALPHA-GLC-6-P-atom14" elementType="C" x2="5.2092" y2="-2.1084"/> <atom id="ALPHA-GLC-6-P-atom15" elementType="C" x2="5.2092" y2="-3.5192"/> <atom id="ALPHA-GLC-6-P-atom16" elementType="P" x2="1.3953" y2="-3.5192"/> <bond id="ALPHA-GLC-6-P-bond1" atomRefs="ALPHA-GLC-6-P-atom14 ALPHA-GLC-6-P-atom15" order="1"/> <bond id="ALPHA-GLC-6-P-bond2" atomRefs="ALPHA-GLC-6-P-atom13 ALPHA-GLC-6-P-atom14" order="1"/> <bond id="ALPHA-GLC-6-P-bond3" atomRefs="ALPHA-GLC-6-P-atom12 ALPHA-GLC-6-P-atom13" order="1"/> <bond id="ALPHA-GLC-6-P-bond4" atomRefs="ALPHA-GLC-6-P-atom11 ALPHA-GLC-6-P-atom12" order="1"/> <bond id="ALPHA-GLC-6-P-bond5" atomRefs="ALPHA-GLC-6-P-atom10 ALPHA-GLC-6-P-atom15" order="1"/> <bond id="ALPHA-GLC-6-P-bond6" atomRefs="ALPHA-GLC-6-P-atom10 ALPHA-GLC-6-P-atom11" order="1"/> <bond id="ALPHA-GLC-6-P-bond7" atomRefs="ALPHA-GLC-6-P-atom9 ALPHA-GLC-6-P-atom16" order="1"/> <bond id="ALPHA-GLC-6-P-bond8" atomRefs="ALPHA-GLC-6-P-atom15 ALPHA-GLC-6-P-atom8" order="1"/> <bond id="ALPHA-GLC-6-P-bond9" atomRefs="ALPHA-GLC…

unificationXref21827
type: unificationXref
DB: CapCyc
ID: ALPHA-GLC-6-P

unificationXref21826
type: unificationXref
DB: LIGAND
ID: C00668

phys-ent-participant24431
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20878
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20878
type: smallMolecule
MOLECULAR-WEIGHT: 422.279
NAME: trehalose 6-phosphate
STRUCTURE: chemicalStructure20882
SYNONYMS: α,α-trehalose 6-phosphate
XREF: unificationXref20881
XREF: unificationXref20880
XREF: unificationXref20879

chemicalStructure20882
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TREHALOSE-6P-atom1" elementType="C" x2="3.2792" y2="3.3083"/> <atom id="TREHALOSE-6P-atom2" elementType="C" x2="3.2792" y2="4.0667"/> <atom id="TREHALOSE-6P-atom3" elementType="C" x2="2.6296" y2="4.45"/> <atom id="TREHALOSE-6P-atom4" elementType="C" x2="1.9718" y2="4.0667"/> <atom id="TREHALOSE-6P-atom5" elementType="C" x2="1.9718" y2="3.3083"/> <atom id="TREHALOSE-6P-atom6" elementType="O" x2="2.6296" y2="2.9333"/> <atom id="TREHALOSE-6P-atom7" elementType="C" x2="3.9287" y2="2.9333"/> <atom id="TREHALOSE-6P-atom8" elementType="O" x2="2.6317" y2="5.2"/> <atom id="TREHALOSE-6P-atom9" elementType="O" x2="3.9305" y2="4.4386"/> <atom id="TREHALOSE-6P-atom10" elementType="O" x2="1.0233" y2="2.7524"/> <atom id="TREHALOSE-6P-atom11" elementType="O" x2="1.3215" y2="4.2529"/> <atom id="TREHALOSE-6P-atom12" elementType="O" x2="4.5782" y2="3.3083"/> <atom id="TREHALOSE-6P-atom13" elementType="C" x2="-1.2958" y2="3.3083"/> <atom id="TREHALOSE-6P-atom14" elementType="C" x2="-1.2958" y2="4.0667"/> <atom id="TREHALOSE-6P-atom15" elementType="C" x2="-0.6463" y2="4.45"/> <atom id="TREHALOSE-6P-atom16" elementType="C" x2="0.0115" y2="4.0667"/> <atom id="TREHALOSE-6P-atom17" elementType="C" x2="0.0115" y2="3.3083"/> <atom id="TREHALOSE-6P-atom18" elementType="O" x2="-0.6463" y2="2.9333"/> <atom id="TREHALOSE-6P-atom19" elementType="C" x2="-1.9454" y2="2.9333"/> <atom id="TREHALOSE-6P-atom20" elementType="O" x2="-0.6484" y2="5.2"/> <atom id="TREHALOSE-6P-atom21" elementType="O" x2="-1.9471" y2="4.4386"/> <atom id="TREHALOSE-6P-atom22" elementType="O" x2="0.5743" y2="4.7945"/> <atom id="TREHALOSE-6P-atom23" elementType="O" x2="-2.5949" y2="3.3083"/> <atom id="TREHALOSE-6P-atom24" elementType="P" x2="5.325" y2="3.3083"/> <atom id="TREHALOSE-6P-atom25" elementType="O" x2="6.075" y2="3.3083"/> <atom id="TREHALOSE-6P-atom26" elementType="O" x2="5.325" y2="2.5583"/> <atom id="TREHALOSE-6P-atom27" elementType="O" x2="5.3218" y2="4.0583"/> <bond id="TREHALOSE-6P-bond1" atomRefs="TRE…

unificationXref20881
type: unificationXref
DB: CapCyc
ID: TREHALOSE-6P

unificationXref20880
type: unificationXref
DB: CAS
ID: 4484-88-2

unificationXref20879
type: unificationXref
DB: LIGAND
ID: C00689

unificationXref26584
type: unificationXref
DB: CapCyc
ID: 2.4.1.36-RXN

phys-ent-participant26333
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26331
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26331
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26332

unificationXref26332
type: unificationXref
DB: CapCyc
ID: SGNU197215-MONOMER

unificationXref26596
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-153

catalysis26593
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26328
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26594

phys-ent-participant26328
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26326
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26326
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26327

unificationXref26327
type: unificationXref
DB: CapCyc
ID: SGNU197749-MONOMER

unificationXref26594
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-218

catalysis26591
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26323
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26592

phys-ent-participant26323
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26321
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26321
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26322

unificationXref26322
type: unificationXref
DB: CapCyc
ID: SGNU199825-MONOMER

unificationXref26592
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-378

catalysis26589
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26318
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26590

phys-ent-participant26318
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26316
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26316
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26317

unificationXref26317
type: unificationXref
DB: CapCyc
ID: SGNU199886-MONOMER

unificationXref26590
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-382

catalysis26587
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26313
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26588

phys-ent-participant26313
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26311
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26311
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26312

unificationXref26312
type: unificationXref
DB: CapCyc
ID: SGNU203554-MONOMER

unificationXref26588
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-625

catalysis26585
type: catalysis
CONTROLLED: biochemicalReaction26583
CONTROLLER: phys-ent-participant26308
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26586

phys-ent-participant26308
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26306
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26306
type: protein
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26307

unificationXref26307
type: unificationXref
DB: CapCyc
ID: SGNU204039-MONOMER

unificationXref26586
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-661

catalysis26569
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26547
NAME: cellulose synthase
XREF: unificationXref26570

biochemicalReaction26548
type: biochemicalReaction
EC-NUMBER: 2.4.1.29
LEFT: phys-ent-participant26553
LEFT: phys-ent-participant26558
NAME: Cellulose synthase (GDP-forming)
RIGHT: phys-ent-participant26558
RIGHT: phys-ent-participant21290
SYNONYMS: GDP-glucose-cellulose glucosyltransferase
SYNONYMS: GDP-glucose-β-D-glucan glucosyltransferase
XREF: unificationXref26549

phys-ent-participant26558
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26554
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26554
type: smallMolecule
NAME: cellulose
SYNONYMS: α-cel
SYNONYMS: α-cellulose
SYNONYMS: (1,4-β-D-glucosyl)(N)
XREF: unificationXref26557
XREF: unificationXref26556
XREF: unificationXref26555

unificationXref26557
type: unificationXref
DB: CapCyc
ID: CELLULOSE

unificationXref26556
type: unificationXref
DB: CAS
ID: 9004-34-6

unificationXref26555
type: unificationXref
DB: LIGAND
ID: C00760

unificationXref26549
type: unificationXref
DB: CapCyc
ID: CELLULOSE-SYNTHASE-(GDP-FORMING)-RXN

phys-ent-participant26547
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26545
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26545
type: protein
NAME: cellulose synthase
ORGANISM: bioSource20982
XREF: unificationXref26546

unificationXref26546
type: unificationXref
DB: CapCyc
ID: SGNU197734-MONOMER

unificationXref26570
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-216

catalysis26567
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26542
NAME: cellulose synthase
XREF: unificationXref26568

phys-ent-participant26542
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26540
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26540
type: protein
NAME: cellulose synthase
ORGANISM: bioSource20982
XREF: unificationXref26541

unificationXref26541
type: unificationXref
DB: CapCyc
ID: SGNU199991-MONOMER

unificationXref26568
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-392

catalysis26565
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26537
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26566

phys-ent-participant26537
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26535
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26535
type: protein
NAME: CELLULOSE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26536

unificationXref26536
type: unificationXref
DB: CapCyc
ID: SGNU200753-MONOMER

unificationXref26566
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-443

catalysis26563
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26532
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26564

phys-ent-participant26532
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26530
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26530
type: protein
NAME: CELLULOSE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26531

unificationXref26531
type: unificationXref
DB: CapCyc
ID: SGNU201649-MONOMER

unificationXref26564
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-514

catalysis26561
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26527
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26562

phys-ent-participant26527
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26525
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26525
type: protein
NAME: CELLULOSE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26526

unificationXref26526
type: unificationXref
DB: CapCyc
ID: SGNU202674-MONOMER

unificationXref26562
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-577

catalysis26559
type: catalysis
CONTROLLED: biochemicalReaction26548
CONTROLLER: phys-ent-participant26522
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26560

phys-ent-participant26522
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26520
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26520
type: protein
NAME: CELLULOSE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26521

unificationXref26521
type: unificationXref
DB: CapCyc
ID: SGNU203147-MONOMER

unificationXref26560
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-598

catalysis26543
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26547
NAME: cellulose synthase
XREF: unificationXref26544

biochemicalReaction26512
type: biochemicalReaction
EC-NUMBER: 2.4.1.12
LEFT: phys-ent-participant22187
LEFT: phys-ent-participant26517
NAME: Cellulose synthase (UDP-forming)
RIGHT: phys-ent-participant25132
RIGHT: phys-ent-participant26517
SYNONYMS: UDP-glucose-cellulose glucosyltransferase
SYNONYMS: UDP-glucose-β-D-glucan glucosyltransferase
XREF: unificationXref26513

phys-ent-participant26517
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26514
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26514
type: smallMolecule
COMMENT: This compound class stands for 1,4-β-D-glucosyl polymers.
NAME: a 1,4-beta-D-glucan
SYNONYMS: 14-β-D-glucosyln1
SYNONYMS: (1,4-β-D-glucosyl)(n)
SYNONYMS: (1,4-β-D-glucosyl)(n+1)
SYNONYMS: (1,4-β-D-glucosyl)(n-1)
XREF: unificationXref26516
XREF: unificationXref26515

unificationXref26516
type: unificationXref
DB: CapCyc
ID: 1-4-beta-D-Glucan

unificationXref26515
type: unificationXref
DB: CAS
ID: 9004-34-6

unificationXref26513
type: unificationXref
DB: CapCyc
ID: CELLULOSE-SYNTHASE-(UDP-FORMING)-RXN

unificationXref26544
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-217

catalysis26538
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26542
NAME: cellulose synthase
XREF: unificationXref26539

unificationXref26539
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-393

catalysis26533
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26537
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26534

unificationXref26534
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-444

catalysis26528
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26532
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26529

unificationXref26529
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-515

catalysis26523
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26527
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26524

unificationXref26524
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-578

catalysis26518
type: catalysis
CONTROLLED: biochemicalReaction26512
CONTROLLER: phys-ent-participant26522
NAME: CELLULOSE SYNTHASE
XREF: unificationXref26519

unificationXref26519
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-599

catalysis26507
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26511
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26508

biochemicalReaction26469
type: biochemicalReaction
EC-NUMBER: 2.4.1.91
LEFT: phys-ent-participant26473
LEFT: phys-ent-participant22187
NAME: Flavonol 3-O-glucosyltransferase
RIGHT: phys-ent-participant26476
RIGHT: phys-ent-participant25132
SYNONYMS: UDP-glucose flavonol 3,O-glucosyltransferase
XREF: unificationXref26470

phys-ent-participant26473
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26471
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26471
type: smallMolecule
NAME: a flavonol
XREF: unificationXref26472

unificationXref26472
type: unificationXref
DB: CapCyc
ID: Flavonols

phys-ent-participant26476
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26474
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26474
type: smallMolecule
NAME: a flavonol-3-O-beta-D-glucoside
XREF: unificationXref26475

unificationXref26475
type: unificationXref
DB: CapCyc
ID: Flavonol-3-O-B-D-Glucosides

unificationXref26470
type: unificationXref
DB: CapCyc
ID: FLAVONOL-3-O-GLUCOSYLTRANSFERASE-RXN

phys-ent-participant26511
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26509
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26509
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26510

unificationXref26510
type: unificationXref
DB: CapCyc
ID: SGNU196397-MONOMER

unificationXref26508
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-56

catalysis26502
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26506
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26503

phys-ent-participant26506
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26504
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26504
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26505

unificationXref26505
type: unificationXref
DB: CapCyc
ID: SGNU197279-MONOMER

unificationXref26503
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-171

catalysis26497
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26501
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26498

phys-ent-participant26501
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26499
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26499
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26500

unificationXref26500
type: unificationXref
DB: CapCyc
ID: SGNU197527-MONOMER

unificationXref26498
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-189

catalysis26492
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26496
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26493

phys-ent-participant26496
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26494
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26494
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26495

unificationXref26495
type: unificationXref
DB: CapCyc
ID: SGNU198099-MONOMER

unificationXref26493
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-261

catalysis26487
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26491
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26488

phys-ent-participant26491
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26489
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26489
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26490

unificationXref26490
type: unificationXref
DB: CapCyc
ID: SGNU198615-MONOMER

unificationXref26488
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-309

catalysis26482
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26486
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26483

phys-ent-participant26486
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26484
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26484
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26485

unificationXref26485
type: unificationXref
DB: CapCyc
ID: SGNU204697-MONOMER

unificationXref26483
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-700

catalysis26477
type: catalysis
CONTROLLED: biochemicalReaction26469
CONTROLLER: phys-ent-participant26481
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
XREF: unificationXref26478

phys-ent-participant26481
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26479
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26479
type: protein
NAME: FLAVONOL 3-O-GLUCOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26480

unificationXref26480
type: unificationXref
DB: CapCyc
ID: SGNU199251-MONOMER

unificationXref26478
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-756

catalysis26450
type: catalysis
CONTROLLED: biochemicalReaction26444
CONTROLLER: phys-ent-participant26362
NAME: BRANCHING ENZYME
XREF: unificationXref26451

biochemicalReaction26444
type: biochemicalReaction
EC-NUMBER: 2.4.1.18
LEFT: phys-ent-participant24179
NAME: 1,4-alpha-glucan branching enzyme
RIGHT: phys-ent-participant24075
SYNONYMS: Amylo-(1,4-1,6)-transglycosylase
SYNONYMS: Branching enzyme
SYNONYMS: Amylo-(1,4 to 1,6)transglucosidase
SYNONYMS: Glycogen branching enzyme
XREF: unificationXref26445

phys-ent-participant24179
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24177
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24177
type: smallMolecule
NAME: a 1,4-alpha-D-glucan
SYNONYMS: 1,4-α-D-glucan
SYNONYMS: amylose
SYNONYMS: β-amylase
SYNONYMS: (1,4-α-D-glucosyl)(n)
SYNONYMS: (1,4-α-D-glucosyl)(n+1)
SYNONYMS: (1,4-α-D-glucosyl)(n-1)
XREF: unificationXref24178

unificationXref24178
type: unificationXref
DB: CapCyc
ID: 1-4-alpha-D-Glucan

phys-ent-participant24075
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24070
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24070
type: smallMolecule
COMMENT: Glycogen is a glucose-containing polysaccharide, comprised of approximately 95% α-1,4 linkages and the remainder α-1,6 branch glucosyl linkages, which occur approximately every 12 glucose residues. The average chain length is about 12 to 14 glucose units.
MOLECULAR-WEIGHT: 666.583
NAME: glycogen
STRUCTURE: chemicalStructure24074
SYNONYMS: 6-α-D-(1,4-α-D-glucano)-glucan
XREF: unificationXref24073
XREF: unificationXref24072
XREF: unificationXref24071

chemicalStructure24074
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom1" elementType="C" x2="-1.2494" y2="-3.7161"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom2" elementType="C" x2="-0.6932" y2="-2.1926"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom3" elementType="O" x2="-2.6682" y2="-4.4255"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom4" elementType="C" x2="-0.2257" y2="-4.8285"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom5" elementType="O" x2="0.8625" y2="-1.9427"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom6" elementType="C" x2="-1.7009" y2="-1.0076"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom7" elementType="C" x2="-4.1191" y2="-3.9337"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom8" elementType="C" x2="1.2414" y2="-4.5706"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom9" elementType="O" x2="-0.7094" y2="-6.2956"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom10" elementType="C" x2="1.8057" y2="-3.176"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom11" elementType="O" x2="-0.9351" y2="0.3144"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom12" elementType="O" x2="-4.6834" y2="-2.507"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom13" elementType="C" x2="-5.1026" y2="-5.1671"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom14" elementType="O" x2="2.2087" y2="-5.7636"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom15" elementType="O" x2="3.3695" y2="-3.3775"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom16" elementType="C" x2="-1.9346" y2="1.4832"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom17" elementType="C" x2="-6.2311" y2="-2.3135"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom18" elementType="C" x2="-6.5939" y2="-4.9655"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom19" elementType="O" x2="-4.5303" y2="-6.6019"/> <atom id="6-alpha-D--1-4-alpha-D-Glucano--Glucan-atom20" elementType="C" x2="4.5706" y2="-2.4263"/>…

unificationXref24073
type: unificationXref
DB: CapCyc
ID: 6-alpha-D--1-4-alpha-D-Glucano--Glucan

unificationXref24072
type: unificationXref
DB: CAS
ID: 9005-79-2

unificationXref24071
type: unificationXref
DB: LIGAND
ID: C00182

unificationXref26445
type: unificationXref
DB: CapCyc
ID: GLYCOGEN-BRANCH-RXN

phys-ent-participant26362
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26360
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26360
type: protein
NAME: BRANCHING ENZYME
ORGANISM: bioSource20982
XREF: unificationXref26361

unificationXref26361
type: unificationXref
DB: CapCyc
ID: SGNU196934-MONOMER

unificationXref26451
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-125

catalysis26448
type: catalysis
CONTROLLED: biochemicalReaction26444
CONTROLLER: phys-ent-participant26357
NAME: BRANCHING ENZYME
XREF: unificationXref26449

phys-ent-participant26357
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26355
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26355
type: protein
NAME: BRANCHING ENZYME
ORGANISM: bioSource20982
XREF: unificationXref26356

unificationXref26356
type: unificationXref
DB: CapCyc
ID: SGNU200036-MONOMER

unificationXref26449
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-399

catalysis26446
type: catalysis
CONTROLLED: biochemicalReaction26444
CONTROLLER: phys-ent-participant26352
NAME: BRANCHING ENZYME
XREF: unificationXref26447

phys-ent-participant26352
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26350
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26350
type: protein
NAME: BRANCHING ENZYME
ORGANISM: bioSource20982
XREF: unificationXref26351

unificationXref26351
type: unificationXref
DB: CapCyc
ID: SGNU201840-MONOMER

unificationXref26447
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-529

catalysis26409
type: catalysis
CONTROLLED: biochemicalReaction26406
CONTROLLER: phys-ent-participant26413
NAME: UDP-galactose:MGDG galactosyltransferase
XREF: unificationXref26410

biochemicalReaction26406
type: biochemicalReaction
LEFT: phys-ent-participant26408
LEFT: phys-ent-participant22193
NAME: RXN-1225
RIGHT: phys-ent-participant26405
RIGHT: phys-ent-participant25132
XREF: unificationXref26407

phys-ent-participant26408
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26398
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26398
type: smallMolecule
NAME: mono-beta-D-galactosyldiacylglycerol
STRUCTURE: chemicalStructure26400
SYNONYMS: D-GALACTOSYLDIACYLGLYCEROL
SYNONYMS: monogalactosyl-diacylgycerol
SYNONYMS: 3-β-D-galactosyl-1,2-diacylglycerol
SYNONYMS: diasylglycerol
SYNONYMS: monogalactosyldiglyceride
SYNONYMS: monogalactosyl-diacylglycerol
SYNONYMS: MGDG
SYNONYMS: Galβ1->3acyl2Gro
XREF: unificationXref26399

chemicalStructure26400
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="CPD-451" title="mono-beta-D-galactosyldiacylglycerol" dictRef="dictCPD-451"> <atomArray> <atom id="CPD-451-atom1" elementType="O" x2="9.5541" y2="-10.4947"/> <atom id="CPD-451-atom2" elementType="O" x2="4.7059" y2="-9.0904"/> <atom id="CPD-451-atom3" elementType="O" x2="0.0" y2="-3.2954"/> <atom id="CPD-451-atom4" elementType="O" x2="3.4854" y2="0.0"/> <atom id="CPD-451-atom5" elementType="O" x2="1.0727" y2="-1.3971"/> <atom id="CPD-451-atom6" elementType="O" x2="5.9213" y2="-1.3973"/> <atom id="CPD-451-atom7" elementType="R" x2="10.7687" y2="-8.3903"/> <atom id="CPD-451-atom8" elementType="R" x2="7.1356" y2="-9.0902"/> <atom id="CPD-451-atom9" elementType="C" x2="1.0727" y2="-4.1989"/> <atom id="CPD-451-atom10" elementType="C" x2="8.3461" y2="-6.9941"/> <atom id="CPD-451-atom11" elementType="C" x2="7.1336" y2="-4.8939"/> <atom id="CPD-451-atom12" elementType="O" x2="8.3461" y2="-8.3943"/> <atom id="CPD-451-atom13" elementType="O" x2="5.9211" y2="-4.1939"/> <atom id="CPD-451-atom14" elementType="O" x2="5.9211" y2="-6.9941"/> <atom id="CPD-451-atom15" elementType="O" x2="3.4852" y2="-4.1991"/> <atom id="CPD-451-atom16" elementType="C" x2="9.5586" y2="-9.0943"/> <atom id="CPD-451-atom17" elementType="C" x2="5.9211" y2="-8.3943"/> <atom id="CPD-451-atom18" elementType="C" x2="7.1336" y2="-6.2941"/> <atom id="CPD-451-atom19" elementType="C" x2="3.4852" y2="-1.3971"/> <atom id="CPD-451-atom20" elementType="C" x2="2.2714" y2="-2.0955"/> <atom id="CPD-451-atom21" elementType="C" x2="4.7072" y2="-2.0957"/> <atom id="CPD-451-atom22" elementType="C" x2="2.2714" y2="-3.5003"/> <atom id="CPD-451-atom23" elementType="C" x2="4.7072" y2="-3.5005"/> </atomArray> <bondArray> <bond id="CPD-451-bond1" atomRefs="CPD-451-atom21 CPD-451-atom23" order="1"/> <bond id="CPD-451-bond2" atomRefs="CPD-451-atom20 CPD-451-atom22" order="1"/> <bond id="CPD-451-bond3" atomRefs="CPD-451-atom19 CPD-451-atom21" order="1"/> <bond id="CPD-451-bond4" atomRefs="CPD-451-atom19 CPD-451-a…

unificationXref26399
type: unificationXref
DB: CapCyc
ID: CPD-451

phys-ent-participant22193
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22188
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22188
type: smallMolecule
MOLECULAR-WEIGHT: 566.305
NAME: UDP-galactose
STRUCTURE: chemicalStructure22192
SYNONYMS: UDP-D-galactopyranose
SYNONYMS: UDP-D-galactose
SYNONYMS: uridine diphosphate galactose
XREF: unificationXref22191
XREF: unificationXref22190
XREF: unificationXref22189

chemicalStructure22192
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UDP-GLACTOSE-atom1" elementType="H" x2="13.7704" y2="-7.4216"/> <atom id="UDP-GLACTOSE-atom2" elementType="O" x2="16.1578" y2="-8.7636"/> <atom id="UDP-GLACTOSE-atom3" elementType="O" x2="13.7873" y2="-4.6471"/> <atom id="UDP-GLACTOSE-atom4" elementType="O" x2="9.8993" y2="-2.8086"/> <atom id="UDP-GLACTOSE-atom5" elementType="O" x2="7.1652" y2="-2.8086"/> <atom id="UDP-GLACTOSE-atom6" elementType="O" x2="0.0" y2="-3.2989"/> <atom id="UDP-GLACTOSE-atom7" elementType="O" x2="3.4081" y2="-0.077"/> <atom id="UDP-GLACTOSE-atom8" elementType="O" x2="1.049" y2="-1.4429"/> <atom id="UDP-GLACTOSE-atom9" elementType="O" x2="12.5116" y2="0.0"/> <atom id="UDP-GLACTOSE-atom10" elementType="O" x2="5.7898" y2="-1.4431"/> <atom id="UDP-GLACTOSE-atom11" elementType="O" x2="15.4905" y2="-0.0053"/> <atom id="UDP-GLACTOSE-atom12" elementType="O" x2="9.905" y2="-5.5466"/> <atom id="UDP-GLACTOSE-atom13" elementType="O" x2="7.1652" y2="-5.5466"/> <atom id="UDP-GLACTOSE-atom14" elementType="C" x2="17.3624" y2="-6.7101"/> <atom id="UDP-GLACTOSE-atom15" elementType="C" x2="17.3624" y2="-5.326"/> <atom id="UDP-GLACTOSE-atom16" elementType="C" x2="1.049" y2="-4.1824"/> <atom id="UDP-GLACTOSE-atom17" elementType="C" x2="11.5662" y2="-2.8364"/> <atom id="UDP-GLACTOSE-atom18" elementType="O" x2="11.2743" y2="-4.174"/> <atom id="UDP-GLACTOSE-atom19" elementType="O" x2="3.4079" y2="-4.1826"/> <atom id="UDP-GLACTOSE-atom20" elementType="O" x2="13.9621" y2="-3.2111"/> <atom id="UDP-GLACTOSE-atom21" elementType="O" x2="5.7898" y2="-4.1826"/> <atom id="UDP-GLACTOSE-atom22" elementType="O" x2="8.5342" y2="-4.1776"/> <atom id="UDP-GLACTOSE-atom23" elementType="C" x2="16.1617" y2="-7.3946"/> <atom id="UDP-GLACTOSE-atom24" elementType="C" x2="14.9761" y2="-5.326"/> <atom id="UDP-GLACTOSE-atom25" elementType="C" x2="3.4079" y2="-1.4429"/> <atom id="UDP-GLACTOSE-atom26" elementType="C" x2="2.2209" y2="-2.126"/> <atom id="UDP-GLACTOSE-atom27" elementType="C" x2="13.3127" y2="-1.1138"/> <atom id="UDP…

unificationXref22191
type: unificationXref
DB: CapCyc
ID: UDP-GLACTOSE

unificationXref22190
type: unificationXref
DB: CAS
ID: 2956-16-3

unificationXref22189
type: unificationXref
DB: LIGAND
ID: C00052

phys-ent-participant26405
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26402
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26402
type: smallMolecule
NAME: alpha-D-galactosyl-beta-D-galactosyldiacylglycerol
STRUCTURE: chemicalStructure26404
SYNONYMS: digalactosyldiacylglycerol
SYNONYMS: DGDG
XREF: unificationXref26403

chemicalStructure26404
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="CPD-172" title="alpha-D-galactosyl-beta-D-galactosyldiacylglycerol" dictRef="dictCPD-172"> <atomArray> <atom id="CPD-172-atom1" elementType="O" x2="13.3611" y2="-2.1649"/> <atom id="CPD-172-atom2" elementType="O" x2="14.5363" y2="-8.4437"/> <atom id="CPD-172-atom3" elementType="O" x2="0.0" y2="-5.5981"/> <atom id="CPD-172-atom4" elementType="O" x2="4.8559" y2="-8.4129"/> <atom id="CPD-172-atom5" elementType="O" x2="2.4126" y2="0.0"/> <atom id="CPD-172-atom6" elementType="O" x2="0.0" y2="-1.4228"/> <atom id="CPD-172-atom7" elementType="O" x2="4.8559" y2="-1.4228"/> <atom id="CPD-172-atom8" elementType="O" x2="9.7119" y2="-4.2376"/> <atom id="CPD-172-atom9" elementType="O" x2="7.2685" y2="-2.8148"/> <atom id="CPD-172-atom10" elementType="R" x2="10.8563" y2="-2.1649"/> <atom id="CPD-172-atom11" elementType="R" x2="15.743" y2="-6.3403"/> <atom id="CPD-172-atom12" elementType="C" x2="0.0" y2="-4.2061"/> <atom id="CPD-172-atom13" elementType="C" x2="4.8559" y2="-7.0209"/> <atom id="CPD-172-atom14" elementType="C" x2="10.9178" y2="-4.9175"/> <atom id="CPD-172-atom15" elementType="C" x2="12.1245" y2="-7.0209"/> <atom id="CPD-172-atom16" elementType="O" x2="12.1245" y2="-4.2376"/> <atom id="CPD-172-atom17" elementType="O" x2="13.3304" y2="-6.3403"/> <atom id="CPD-172-atom18" elementType="O" x2="9.7119" y2="-7.0209"/> <atom id="CPD-172-atom19" elementType="O" x2="2.4434" y2="-4.2061"/> <atom id="CPD-172-atom20" elementType="O" x2="7.2685" y2="-7.0209"/> <atom id="CPD-172-atom21" elementType="O" x2="4.8559" y2="-4.2061"/> <atom id="CPD-172-atom22" elementType="C" x2="12.1245" y2="-2.8456"/> <atom id="CPD-172-atom23" elementType="C" x2="14.5363" y2="-7.0209"/> <atom id="CPD-172-atom24" elementType="C" x2="10.9178" y2="-6.3403"/> <atom id="CPD-172-atom25" elementType="C" x2="2.4434" y2="-1.392"/> <atom id="CPD-172-atom26" elementType="C" x2="1.2059" y2="-2.1034"/> <atom id="CPD-172-atom27" elementType="C" x2="3.6493" y2="-2.1034"/> <atom id="CPD-172-atom28" e…

unificationXref26403
type: unificationXref
DB: CapCyc
ID: CPD-172

unificationXref26407
type: unificationXref
DB: CapCyc
ID: RXN-1225

phys-ent-participant26413
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26411
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26411
type: protein
NAME: UDP-galactose:MGDG galactosyltransferase
ORGANISM: bioSource20982
XREF: unificationXref26412

unificationXref26412
type: unificationXref
DB: CapCyc
ID: SGNU204368-MONOMER

unificationXref26410
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-679

catalysis26388
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26333
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26389

biochemicalReaction26376
type: biochemicalReaction
EC-NUMBER: 2.4.1.-
LEFT: phys-ent-participant21829
LEFT: phys-ent-participant25016
NAME: RXN-761
RIGHT: phys-ent-participant24431
RIGHT: phys-ent-participant20977
XREF: unificationXref26377

phys-ent-participant25016
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25011
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25011
type: smallMolecule
MOLECULAR-WEIGHT: 589.345
NAME: ADP-D-glucose
STRUCTURE: chemicalStructure25015
SYNONYMS: adenosine diphosphate glucose
SYNONYMS: ADP-glucose
XREF: unificationXref25014
XREF: unificationXref25013
XREF: unificationXref25012

chemicalStructure25015
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ADP-D-GLUCOSE-atom1" elementType="O" x2="5.2046" y2="-0.831"/> <atom id="ADP-D-GLUCOSE-atom2" elementType="O" x2="3.7713" y2="0.0"/> <atom id="ADP-D-GLUCOSE-atom3" elementType="O" x2="2.3506" y2="-0.8329"/> <atom id="ADP-D-GLUCOSE-atom4" elementType="O" x2="3.7736" y2="-2.4795"/> <atom id="ADP-D-GLUCOSE-atom5" elementType="C" x2="4.4932" y2="-2.0693"/> <atom id="ADP-D-GLUCOSE-atom6" elementType="C" x2="4.4932" y2="-1.2398"/> <atom id="ADP-D-GLUCOSE-atom7" elementType="C" x2="3.7736" y2="-0.8205"/> <atom id="ADP-D-GLUCOSE-atom8" elementType="C" x2="3.0631" y2="-1.2398"/> <atom id="ADP-D-GLUCOSE-atom9" elementType="C" x2="3.0631" y2="-2.0693"/> <atom id="ADP-D-GLUCOSE-atom10" elementType="C" x2="2.3525" y2="-2.4795"/> <atom id="ADP-D-GLUCOSE-atom11" elementType="O" x2="1.638" y2="-2.067"/> <atom id="ADP-D-GLUCOSE-atom12" elementType="O" x2="5.2026" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom13" elementType="P" x2="7.6776" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom14" elementType="P" x2="6.0276" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom15" elementType="O" x2="6.0276" y2="-3.3065"/> <atom id="ADP-D-GLUCOSE-atom16" elementType="O" x2="7.6776" y2="-3.3065"/> <atom id="ADP-D-GLUCOSE-atom17" elementType="O" x2="7.6776" y2="-1.6565"/> <atom id="ADP-D-GLUCOSE-atom18" elementType="O" x2="6.0276" y2="-1.6565"/> <atom id="ADP-D-GLUCOSE-atom19" elementType="O" x2="6.8526" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom20" elementType="O" x2="8.5026" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom21" elementType="C" x2="9.9316" y2="-2.4815"/> <atom id="ADP-D-GLUCOSE-atom22" elementType="C" x2="9.2171" y2="-2.894"/> <atom id="ADP-D-GLUCOSE-atom23" elementType="O" x2="10.599" y2="-2.9665"/> <atom id="ADP-D-GLUCOSE-atom24" elementType="C" x2="10.1865" y2="-1.6969"/> <atom id="ADP-D-GLUCOSE-atom25" elementType="C" x2="11.0115" y2="-1.6969"/> <atom id="ADP-D-GLUCOSE-atom26" elementType="O" x2="9.6031" y2="-1.1136"/> <atom id="ADP-D-GLUCOSE-atom27" elementType="O" x2="11.424" y2="-…

unificationXref25014
type: unificationXref
DB: CapCyc
ID: ADP-D-GLUCOSE

unificationXref25013
type: unificationXref
DB: CAS
ID: 2140-58-1

unificationXref25012
type: unificationXref
DB: LIGAND
ID: C00498

unificationXref26377
type: unificationXref
DB: CapCyc
ID: RXN-761

unificationXref26389
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-154

catalysis26386
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26328
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26387

unificationXref26387
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-219

catalysis26384
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26323
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26385

unificationXref26385
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-379

catalysis26382
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26318
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26383

unificationXref26383
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-383

catalysis26380
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26313
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26381

unificationXref26381
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-626

catalysis26378
type: catalysis
CONTROLLED: biochemicalReaction26376
CONTROLLER: phys-ent-participant26308
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26379

unificationXref26379
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-662

catalysis26372
type: catalysis
CONTROLLED: biochemicalReaction26363
CONTROLLER: phys-ent-participant26362
NAME: BRANCHING ENZYME
XREF: unificationXref26373

biochemicalReaction26363
type: biochemicalReaction
EC-NUMBER: 2.4.1.18
LEFT: phys-ent-participant26367
NAME: 1,4-alpha-glucan branching enzyme
RIGHT: phys-ent-participant24075
SYNONYMS: Amylo-(1,4-1,6)-transglycosylase
SYNONYMS: Branching enzyme
SYNONYMS: Amylo-(1,4 to 1,6)transglucosidase
SYNONYMS: Glycogen branching enzyme
XREF: unificationXref26364

phys-ent-participant26367
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26365
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26365
type: smallMolecule
COMMENT: This class includes the precursors of glycogen that are substrates for the enzyme |FRAME: CPLX-6975|. It includes poly-glycosylated glycogenin (including |FRAME: CPD-7010|, also known as the glycogen primer), but not |FRAME: GLUCOSYL-GLYCOGENIN|, which can not serve as a primer for |FRAME: CPLX-6975|.
NAME: a glucosylated glycogenin
SYNONYMS: (1,4-α-D-glucosyl)(n) glycogenin
SYNONYMS: (1,4-α-D-glucosyl)(n+1) glycogenin
SYNONYMS: (1,4-α-D-glucosyl)(n-1) glycogenin
XREF: unificationXref26366

unificationXref26366
type: unificationXref
DB: CapCyc
ID: POLY-GLUCOSYLATED-GLYCOGENINS

unificationXref26364
type: unificationXref
DB: CapCyc
ID: RXN-7669

unificationXref26373
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-126

catalysis26370
type: catalysis
CONTROLLED: biochemicalReaction26363
CONTROLLER: phys-ent-participant26357
NAME: BRANCHING ENZYME
XREF: unificationXref26371

unificationXref26371
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-400

catalysis26368
type: catalysis
CONTROLLED: biochemicalReaction26363
CONTROLLER: phys-ent-participant26352
NAME: BRANCHING ENZYME
XREF: unificationXref26369

unificationXref26369
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-530

catalysis26358
type: catalysis
CONTROLLED: biochemicalReaction26346
CONTROLLER: phys-ent-participant26362
NAME: BRANCHING ENZYME
XREF: unificationXref26359

biochemicalReaction26346
type: biochemicalReaction
EC-NUMBER: 2.4.1.18
LEFT: phys-ent-participant24179
NAME: 1,4-alpha-glucan branching enzyme
RIGHT: phys-ent-participant24163
SYNONYMS: Amylo-(1,4-1,6)-transglycosylase
SYNONYMS: Branching enzyme
SYNONYMS: Amylo-(1,4 to 1,6)transglucosidase
XREF: unificationXref26347

phys-ent-participant24163
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24161
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24161
type: smallMolecule
COMMENT: Starch is a combination of two polymeric carbohydrates (polysaccharides) called |FRAME: CPD-7045| and |FRAME: CPD-7043|. |FRAME: CPD-7045| contains up to several thousand α-glucosyl units linked almost exclusively in linear α(1->4) linkages, with very few branches of α(1->6) linkages. In |FRAME: CPD-7043|, on the other hand, branching is common, and occurs approximately every 24-30 glucose monomer units. |FRAME: CPD-7045| accounts for 30% of starch, while |FRAME: CPD-7043| accounts for the other 70%.
NAME: starch
XREF: unificationXref24162

unificationXref24162
type: unificationXref
DB: CapCyc
ID: Starch

unificationXref26347
type: unificationXref
DB: CapCyc
ID: RXN-7710

unificationXref26359
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-127

catalysis26353
type: catalysis
CONTROLLED: biochemicalReaction26346
CONTROLLER: phys-ent-participant26357
NAME: BRANCHING ENZYME
XREF: unificationXref26354

unificationXref26354
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-401

catalysis26348
type: catalysis
CONTROLLED: biochemicalReaction26346
CONTROLLER: phys-ent-participant26352
NAME: BRANCHING ENZYME
XREF: unificationXref26349

unificationXref26349
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-531

catalysis26329
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26333
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26330

biochemicalReaction26302
type: biochemicalReaction
EC-NUMBER: 2.4.1.15
LEFT: phys-ent-participant22187
LEFT: phys-ent-participant21829
NAME: alpha,alpha-trehalose-phosphate synthase (UDP-forming)
RIGHT: phys-ent-participant25132
RIGHT: phys-ent-participant24431
SYNONYMS: Transglucosylase
SYNONYMS: Trehalose-phosphate synthase
SYNONYMS: Trehalose-6-phosphate synthase
SYNONYMS: Trehalosephosphate-UDP glucosyltransferase
SYNONYMS: UDP-glucose-glucosephosphate glucosyltransferase
XREF: unificationXref26303

unificationXref26303
type: unificationXref
DB: CapCyc
ID: TREHALOSE6PSYN-RXN

unificationXref26330
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-155

catalysis26324
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26328
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26325

unificationXref26325
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-220

catalysis26319
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26323
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26320

unificationXref26320
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-380

catalysis26314
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26318
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26315

unificationXref26315
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-384

catalysis26309
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26313
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26310

unificationXref26310
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-627

catalysis26304
type: catalysis
CONTROLLED: biochemicalReaction26302
CONTROLLER: phys-ent-participant26308
NAME: TREHALOSE-6-PHOSPHATE SYNTHASE
XREF: unificationXref26305

unificationXref26305
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-663

catalysis26278
type: catalysis
CONTROLLED: biochemicalReaction26276
CONTROLLER: phys-ent-participant26282
NAME: ADENINE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26279

biochemicalReaction26276
type: biochemicalReaction
EC-NUMBER: 2.4.2.7
LEFT: phys-ent-participant21115
LEFT: phys-ent-participant21108
NAME: Adenine phosphoribosyltransferase
RIGHT: phys-ent-participant25090
RIGHT: phys-ent-participant24067
SYNONYMS: APRT
SYNONYMS: Transphosphoribosidase
SYNONYMS: AMP diphosphorylase
SYNONYMS: AMP pyrophosphorylase
XREF: unificationXref26277

phys-ent-participant21108
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21102
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21102
type: smallMolecule
MOLECULAR-WEIGHT: 177.975
NAME: pyrophosphate
STRUCTURE: chemicalStructure21107
SYNONYMS: diphosphate
SYNONYMS: PPi
SYNONYMS: PP
SYNONYMS: pyrophosphate
XREF: unificationXref21106
XREF: unificationXref21105
XREF: unificationXref21104
XREF: unificationXref21103

chemicalStructure21107
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PPI-atom1" elementType="O" x2="-0.00671" y2="-0.51342"/> <atom id="PPI-atom2" elementType="O" x2="0.51007" y2="-0.02685"/> <atom id="PPI-atom3" elementType="O" x2="0.51007" y2="-1.0"/> <atom id="PPI-atom4" elementType="P" x2="0.51007" y2="-0.51342"/> <atom id="PPI-atom5" elementType="O" x2="-1.0" y2="-0.51342"/> <atom id="PPI-atom6" elementType="O" x2="-0.51342" y2="-1.0"/> <atom id="PPI-atom7" elementType="O" x2="0.99664" y2="-0.51342"/> <atom id="PPI-atom8" elementType="P" x2="-0.51342" y2="-0.51342"/> <atom id="PPI-atom9" elementType="O" x2="-0.51342" y2="-0.02685"/> <bond id="PPI-bond1" atomRefs="PPI-atom9 PPI-atom8" order="2"/> <bond id="PPI-bond2" atomRefs="PPI-atom7 PPI-atom4" order="1"/> <bond id="PPI-bond3" atomRefs="PPI-atom6 PPI-atom8" order="1"/> <bond id="PPI-bond4" atomRefs="PPI-atom5 PPI-atom8" order="1"/> <bond id="PPI-bond5" atomRefs="PPI-atom4 PPI-atom1" order="1"/> <bond id="PPI-bond6" atomRefs="PPI-atom3 PPI-atom4" order="1"/> <bond id="PPI-bond7" atomRefs="PPI-atom2 PPI-atom4" order="2"/> <bond id="PPI-bond8" atomRefs="PPI-atom1 PPI-atom8" order="1"/> <formula concise="H 4 O 7 P 2" formalCharge="0"/> 177.975 O(P(O)(O)=O)P(O)(=O)O

unificationXref21106
type: unificationXref
DB: CapCyc
ID: PPI

unificationXref21105
type: unificationXref
DB: CAS
ID: 2466-09-3

unificationXref21104
type: unificationXref
DB: LIGAND
ID: C00013

unificationXref21103
type: unificationXref
DB: CAS
ID: 09/03/2466

phys-ent-participant25090
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25085
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25085
type: smallMolecule
MOLECULAR-WEIGHT: 390.071
NAME: 5-phosphoribosyl 1-pyrophosphate
STRUCTURE: chemicalStructure25089
SYNONYMS: PRPP
SYNONYMS: 5-phospho-α-D-ribose 1-diphosphate
SYNONYMS: 5-phosphoribosyl diphosphate
SYNONYMS: 5-phosphoribosyl-1-PP
SYNONYMS: 5-phosphoribosyl-PP
SYNONYMS: 5-phosphoribosyl-1-pyrophosphate
SYNONYMS: 5-phosphoribosylpyrophosphate
SYNONYMS: phosphoribosylpyrophosphate
SYNONYMS: 5-phospho-ribosyl-pyrophosphate
SYNONYMS: α-D-5-phosphoribosylPP
SYNONYMS: α-D-5-P-RibosylPP
SYNONYMS: 5-phospho-α-D-ribose-1-diphosphate
XREF: unificationXref25088
XREF: unificationXref25087
XREF: unificationXref25086

chemicalStructure25089
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PRPP-atom1" elementType="O" x2="1.4085" y2="-3.2839"/> <atom id="PRPP-atom2" elementType="O" x2="12.9058" y2="-1.4776"/> <atom id="PRPP-atom3" elementType="O" x2="10.1058" y2="-1.4858"/> <atom id="PRPP-atom4" elementType="O" x2="4.7189" y2="0.0"/> <atom id="PRPP-atom5" elementType="O" x2="7.7647" y2="0.0"/> <atom id="PRPP-atom6" elementType="O" x2="1.4112" y2="-0.484"/> <atom id="PRPP-atom7" elementType="O" x2="0.0" y2="-1.8798"/> <atom id="PRPP-atom8" elementType="O" x2="14.3055" y2="-2.9057"/> <atom id="PRPP-atom9" elementType="O" x2="12.9228" y2="-4.2775"/> <atom id="PRPP-atom10" elementType="O" x2="10.1058" y2="-4.2858"/> <atom id="PRPP-atom11" elementType="C" x2="3.7776" y2="-2.8967"/> <atom id="PRPP-atom12" elementType="O" x2="2.8" y2="-1.8947"/> <atom id="PRPP-atom13" elementType="O" x2="6.2418" y2="-3.287"/> <atom id="PRPP-atom14" elementType="O" x2="8.7059" y2="-2.8967"/> <atom id="PRPP-atom15" elementType="O" x2="11.5058" y2="-2.8748"/> <atom id="PRPP-atom16" elementType="C" x2="5.5418" y2="-1.1326"/> <atom id="PRPP-atom17" elementType="C" x2="6.9418" y2="-1.1326"/> <atom id="PRPP-atom18" elementType="C" x2="5.1091" y2="-2.4641"/> <atom id="PRPP-atom19" elementType="C" x2="7.3744" y2="-2.4641"/> <atom id="PRPP-atom20" elementType="P" x2="1.4" y2="-1.8839"/> <atom id="PRPP-atom21" elementType="P" x2="12.9058" y2="-2.8776"/> <atom id="PRPP-atom22" elementType="P" x2="10.1058" y2="-2.8858"/> <bond id="PRPP-bond1" atomRefs="PRPP-atom17 PRPP-atom19" order="1"/> <bond id="PRPP-bond2" atomRefs="PRPP-atom16 PRPP-atom18" order="1"/> <bond id="PRPP-bond3" atomRefs="PRPP-atom16 PRPP-atom17" order="1"/> <bond id="PRPP-bond4" atomRefs="PRPP-atom15 PRPP-atom22" order="1"/> <bond id="PRPP-bond5" atomRefs="PRPP-atom15 PRPP-atom21" order="1"/> <bond id="PRPP-bond6" atomRefs="PRPP-atom14 PRPP-atom22" order="1"/> <bond id="PRPP-bond7" atomRefs="PRPP-atom19 PRPP-atom14" order="1"/> <bond id="PRPP-bond8" atomRefs="PRPP-atom13 PRPP-atom19" order="1"/> <bond id="PRPP-b…

unificationXref25088
type: unificationXref
DB: CapCyc
ID: PRPP

unificationXref25087
type: unificationXref
DB: CAS
ID: 13270-65-0

unificationXref25086
type: unificationXref
DB: LIGAND
ID: C00119

phys-ent-participant24067
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24062
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24062
type: smallMolecule
MOLECULAR-WEIGHT: 135.128
NAME: adenine
STRUCTURE: chemicalStructure24066
SYNONYMS: 2-aminopurine
XREF: unificationXref24065
XREF: unificationXref24064
XREF: unificationXref24063

chemicalStructure24066
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ADENINE-atom1" elementType="C" x2="-1.0869" y2="-2.7101"/> <atom id="ADENINE-atom2" elementType="C" x2="-1.8346" y2="-1.4924"/> <atom id="ADENINE-atom3" elementType="C" x2="-0.4063" y2="-1.4538"/> <atom id="ADENINE-atom4" elementType="C" x2="-0.3838" y2="-2.2784"/> <atom id="ADENINE-atom5" elementType="C" x2="0.8739" y2="-1.8315"/> <atom id="ADENINE-atom6" elementType="N" x2="0.3711" y2="-1.1776"/> <atom id="ADENINE-atom7" elementType="N" x2="0.4074" y2="-2.5119"/> <atom id="ADENINE-atom8" elementType="N" x2="-1.1317" y2="-1.0608"/> <atom id="ADENINE-atom9" elementType="N" x2="-1.8124" y2="-2.3172"/> <atom id="ADENINE-atom10" elementType="N" x2="-1.0645" y2="-3.5349"/> <bond id="ADENINE-bond1" atomRefs="ADENINE-atom1 ADENINE-atom10" order="1"/> <bond id="ADENINE-bond2" atomRefs="ADENINE-atom6 ADENINE-atom5" order="1"/> <bond id="ADENINE-bond3" atomRefs="ADENINE-atom7 ADENINE-atom5" order="2"/> <bond id="ADENINE-bond4" atomRefs="ADENINE-atom7 ADENINE-atom4" order="1"/> <bond id="ADENINE-bond5" atomRefs="ADENINE-atom3 ADENINE-atom4" order="A"/> <bond id="ADENINE-bond6" atomRefs="ADENINE-atom3 ADENINE-atom6" order="1"/> <bond id="ADENINE-bond7" atomRefs="ADENINE-atom8 ADENINE-atom3" order="A"/> <bond id="ADENINE-bond8" atomRefs="ADENINE-atom2 ADENINE-atom8" order="A"/> <bond id="ADENINE-bond9" atomRefs="ADENINE-atom9 ADENINE-atom2" order="A"/> <bond id="ADENINE-bond10" atomRefs="ADENINE-atom1 ADENINE-atom9" order="A"/> <bond id="ADENINE-bond11" atomRefs="ADENINE-atom4 ADENINE-atom1" order="A"/> <formula concise="C 5 H 5 N 5" formalCharge="0"/> 135.128 c1(ncnc2(c1N=CN2))(N)

unificationXref24065
type: unificationXref
DB: CapCyc
ID: ADENINE

unificationXref24064
type: unificationXref
DB: CAS
ID: 73-24-5

unificationXref24063
type: unificationXref
DB: LIGAND
ID: C00147

unificationXref26277
type: unificationXref
DB: CapCyc
ID: ADENPRIBOSYLTRAN-RXN

phys-ent-participant26282
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26280
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26280
type: protein
NAME: ADENINE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26281

unificationXref26281
type: unificationXref
DB: CapCyc
ID: SGNU196188-MONOMER

unificationXref26279
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-13

catalysis26251
type: catalysis
CONTROLLED: biochemicalReaction26244
CONTROLLER: phys-ent-participant26255
NAME: AMIDOPHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26252

biochemicalReaction26244
type: biochemicalReaction
EC-NUMBER: 2.4.2.14
LEFT: phys-ent-participant25090
LEFT: phys-ent-participant21089
LEFT: phys-ent-participant20951
NAME: Amidophosphoribosyltransferase
RIGHT: phys-ent-participant21186
RIGHT: phys-ent-participant21108
RIGHT: phys-ent-participant21095
SYNONYMS: Phosphoribosyldiphosphate 5-amidotransferase
SYNONYMS: Glutamine phosphoribosylpyrophosphate amidotransferase
XREF: unificationXref26245

phys-ent-participant21186
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21182
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21182
type: smallMolecule
MOLECULAR-WEIGHT: 229.126
NAME: 5-phospho-beta-D-ribosyl-amine
STRUCTURE: chemicalStructure21185
SYNONYMS: 5-phospho-β-D-ribosyl-amine
SYNONYMS: 5-P-β-D-ribosyl-amine
SYNONYMS: PRA
SYNONYMS: 5-phosphoribosylamine
XREF: unificationXref21184
XREF: unificationXref21183

chemicalStructure21185
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom1" elementType="H" x2="0.99714285" y2="-0.6628571"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom2" elementType="C" x2="0.10285714" y2="-0.24"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom3" elementType="O" x2="-1.0" y2="-0.24"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom4" elementType="H" x2="0.10285714" y2="-0.6628571"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom5" elementType="O" x2="-0.30285713" y2="-0.24"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom6" elementType="N" x2="0.99714285" y2="-0.24285714"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom7" elementType="O" x2="0.8257143" y2="-1.0"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom8" elementType="H" x2="0.26857144" y2="-0.61714286"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom9" elementType="C" x2="0.99714285" y2="-0.46857142"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom10" elementType="P" x2="-0.68285716" y2="-0.24"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom11" elementType="O" x2="0.26857144" y2="-1.0"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom12" elementType="O" x2="0.5485714" y2="-0.21714285"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom13" elementType="O" x2="-0.68285716" y2="-0.56"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom14" elementType="O" x2="-0.68285716" y2="0.07714286"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom15" elementType="C" x2="0.8257143" y2="-0.80857146"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom16" elementType="H" x2="0.8257143" y2="-0.61714286"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom17" elementType="C" x2="0.26857144" y2="-0.80857146"/> <atom id="5-P-BETA-D-RIBOSYL-AMINE-atom18" elementType="C" x2="0.10285714" y2="-0.46857142"/> <bond id="5-P-BETA-D-RIBOSYL-AMINE-bond1" atomRefs="5-P-BETA-D-RIBOSYL-AMINE-atom18 5-P-BETA-D-RIBOSYL-AMINE-atom17" order="1"/> <bond id="5-P-BETA-D-RIBOSYL-AMINE-bond2" atomRefs="5-P-BETA-D-RIBOSYL-AMINE-atom18 5-P-BETA-D-RIBOSYL-AMINE-atom12" order="1"/> <bond id="5-P-BETA-D-RIBOSYL-AMINE-bond3" atomRefs="5-P-BETA-D-RIBOSYL-AMINE-atom17 5-P-BETA-D-RIBOSYL-AMINE-ato…

unificationXref21184
type: unificationXref
DB: CapCyc
ID: 5-P-BETA-D-RIBOSYL-AMINE

unificationXref21183
type: unificationXref
DB: LIGAND
ID: C03090

phys-ent-participant21095
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21090
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

unificationXref26245
type: unificationXref
DB: CapCyc
ID: PRPPAMIDOTRANS-RXN

phys-ent-participant26255
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26253
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26253
type: protein
NAME: AMIDOPHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26254

unificationXref26254
type: unificationXref
DB: CapCyc
ID: SGNU198467-MONOMER

unificationXref26252
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-300

catalysis26246
type: catalysis
CONTROLLED: biochemicalReaction26244
CONTROLLER: phys-ent-participant26250
NAME: AMIDOPHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26247

phys-ent-participant26250
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26248
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26248
type: protein
NAME: AMIDOPHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26249

unificationXref26249
type: unificationXref
DB: CapCyc
ID: SGNU198546-MONOMER

unificationXref26247
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-304

catalysis26239
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26243
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26240

biochemicalReaction26212
type: biochemicalReaction
EC-NUMBER: 2.4.2.18
LEFT: phys-ent-participant25090
LEFT: phys-ent-participant23124
NAME: Anthranilate phosphoribosyltransferase
RIGHT: phys-ent-participant22130
RIGHT: phys-ent-participant21108
SYNONYMS: Phosphoribosyl-anthranilate diphosphorylase
SYNONYMS: Phosphoribosyl-anthranilate pyrophosphorylase
SYNONYMS: anthranilate phosphoribosyltransfer
SYNONYMS: PR transferase
XREF: unificationXref26213

phys-ent-participant23124
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23119
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23119
type: smallMolecule
MOLECULAR-WEIGHT: 137.138
NAME: anthranilate
STRUCTURE: chemicalStructure23123
SYNONYMS: anthranilic acid
SYNONYMS: 2-aminobenzoic acid
SYNONYMS: vitamin L1
SYNONYMS: o-aminobenzoic acid
SYNONYMS: 2-aminobenzoate
XREF: unificationXref23122
XREF: unificationXref23121
XREF: unificationXref23120

chemicalStructure23123
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ANTHRANILATE-atom1" elementType="C" x2="-0.49254" y2="-1.0"/> <atom id="ANTHRANILATE-atom2" elementType="C" x2="-1.0" y2="-0.13765"/> <atom id="ANTHRANILATE-atom3" elementType="C" x2="0.00166" y2="-0.14428"/> <atom id="ANTHRANILATE-atom4" elementType="N" x2="0.49917" y2="-0.99668"/> <atom id="ANTHRANILATE-atom5" elementType="O" x2="0.49917" y2="0.73134"/> <atom id="ANTHRANILATE-atom6" elementType="C" x2="0.49917" y2="0.15423"/> <atom id="ANTHRANILATE-atom7" elementType="C" x2="-1.0" y2="-0.71476"/> <atom id="ANTHRANILATE-atom8" elementType="C" x2="-0.49585" y2="0.15091"/> <atom id="ANTHRANILATE-atom9" elementType="C" x2="0.00166" y2="-0.70813"/> <atom id="ANTHRANILATE-atom10" elementType="O" x2="0.99668" y2="-0.13433"/> <bond id="ANTHRANILATE-bond1" atomRefs="ANTHRANILATE-atom10 ANTHRANILATE-atom6" order="1"/> <bond id="ANTHRANILATE-bond2" atomRefs="ANTHRANILATE-atom9 ANTHRANILATE-atom3" order="A"/> <bond id="ANTHRANILATE-bond3" atomRefs="ANTHRANILATE-atom3 ANTHRANILATE-atom8" order="A"/> <bond id="ANTHRANILATE-bond4" atomRefs="ANTHRANILATE-atom7 ANTHRANILATE-atom1" order="A"/> <bond id="ANTHRANILATE-bond5" atomRefs="ANTHRANILATE-atom2 ANTHRANILATE-atom7" order="A"/> <bond id="ANTHRANILATE-bond6" atomRefs="ANTHRANILATE-atom6 ANTHRANILATE-atom3" order="1"/> <bond id="ANTHRANILATE-bond7" atomRefs="ANTHRANILATE-atom5 ANTHRANILATE-atom6" order="2"/> <bond id="ANTHRANILATE-bond8" atomRefs="ANTHRANILATE-atom4 ANTHRANILATE-atom9" order="1"/> <bond id="ANTHRANILATE-bond9" atomRefs="ANTHRANILATE-atom8 ANTHRANILATE-atom2" order="A"/> <bond id="ANTHRANILATE-bond10" atomRefs="ANTHRANILATE-atom1 ANTHRANILATE-atom9" order="A"/> <formula concise="C 7 H 7 N 1 O 2" formalCharge="0"/> 137.138 C(=O)(O)c1(c(N)cccc1)

unificationXref23122
type: unificationXref
DB: CapCyc
ID: ANTHRANILATE

unificationXref23121
type: unificationXref
DB: CAS
ID: 118-92-3

unificationXref23120
type: unificationXref
DB: LIGAND
ID: C00108

phys-ent-participant22130
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22126
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22126
type: smallMolecule
MOLECULAR-WEIGHT: 349.233
NAME: N-(5'-phosphoribosyl)-anthranilate
STRUCTURE: chemicalStructure22129
SYNONYMS: N-(5-Phospho-D-ribosyl)anthranilate
SYNONYMS: N-(5-phospho-β-D-ribosyl)-anthranilate
SYNONYMS: 5-phosphoribosyl-anthranilate
SYNONYMS: 5-P-ribosyl-anthranilate
SYNONYMS: 5'-phosphoribosyl-anthranilate
SYNONYMS: 5'-P-ribosyl-anthranilate
SYNONYMS: N-(5-phosphoribosyl)-anthranilate
XREF: unificationXref22128
XREF: unificationXref22127

chemicalStructure22129
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom1" elementType="C" x2="0.22602" y2="0.06016"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom2" elementType="H" x2="0.62602" y2="-0.73008"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom3" elementType="N" x2="0.62602" y2="-0.14146"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom4" elementType="C" x2="0.45691" y2="0.19024"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom5" elementType="C" x2="0.00488" y2="0.45691"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom6" elementType="H" x2="0.05691" y2="-0.66829"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom7" elementType="O" x2="-0.72358" y2="-0.1187"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom8" elementType="H" x2="-0.07642" y2="-0.73008"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom9" elementType="C" x2="0.62602" y2="-0.56423"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom10" elementType="P" x2="-0.72358" y2="-0.39512"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom11" elementType="C" x2="-0.07642" y2="-0.56423"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom12" elementType="C" x2="0.48943" y2="-0.83415"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom13" elementType="C" x2="0.72033" y2="0.59675"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom14" elementType="O" x2="0.72033" y2="0.87317"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom15" elementType="O" x2="-1.0" y2="-0.39512"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom16" elementType="C" x2="0.45691" y2="0.45691"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom17" elementType="C" x2="0.00488" y2="0.19024"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom18" elementType="O" x2="0.99675" y2="0.59675"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom19" elementType="O" x2="0.27805" y2="-0.36911"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom20" elementType="O" x2="-0.46341" y2="-0.39512"/> <atom id="N-(5-PHOSPHORIBOSYL)-ANTHRANILATE-atom21" elementType="C" x2="-0.0…

unificationXref22128
type: unificationXref
DB: CapCyc
ID: N-(5-PHOSPHORIBOSYL)-ANTHRANILATE

unificationXref22127
type: unificationXref
DB: LIGAND
ID: C04302

unificationXref26213
type: unificationXref
DB: CapCyc
ID: PRTRANS-RXN

phys-ent-participant26243
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26241
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26241
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26242

unificationXref26242
type: unificationXref
DB: CapCyc
ID: SGNU200156-MONOMER

unificationXref26240
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-405

catalysis26234
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26238
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26235

phys-ent-participant26238
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26236
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26236
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26237

unificationXref26237
type: unificationXref
DB: CapCyc
ID: SGNU200883-MONOMER

unificationXref26235
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-454

catalysis26229
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26233
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26230

phys-ent-participant26233
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26231
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26231
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26232

unificationXref26232
type: unificationXref
DB: CapCyc
ID: SGNU203454-MONOMER

unificationXref26230
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-618

catalysis26224
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26228
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26225

phys-ent-participant26228
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26226
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26226
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26227

unificationXref26227
type: unificationXref
DB: CapCyc
ID: SGNU204205-MONOMER

unificationXref26225
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-669

catalysis26219
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26223
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26220

phys-ent-participant26223
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26221
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26221
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26222

unificationXref26222
type: unificationXref
DB: CapCyc
ID: SGNU199296-MONOMER

unificationXref26220
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-759

catalysis26214
type: catalysis
CONTROLLED: biochemicalReaction26212
CONTROLLER: phys-ent-participant26218
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26215

phys-ent-participant26218
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26216
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26216
type: protein
NAME: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26217

unificationXref26217
type: unificationXref
DB: CapCyc
ID: SGNU199297-MONOMER

unificationXref26215
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-760

catalysis26199
type: catalysis
CONTROLLED: biochemicalReaction26197
CONTROLLER: phys-ent-participant26203
NAME: URACIL PHOSPHORIBOSYLTRANSFERASE
XREF: unificationXref26200

biochemicalReaction26197
type: biochemicalReaction
EC-NUMBER: 2.4.2.9
LEFT: phys-ent-participant21108
LEFT: phys-ent-participant23402
NAME: Uracil phosphoribosyltransferase
RIGHT: phys-ent-participant25090
RIGHT: phys-ent-participant23810
SYNONYMS: UMP diphosphorylase
SYNONYMS: UMP pyrophosphorylase
XREF: unificationXref26198

phys-ent-participant23402
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23397
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23397
type: smallMolecule
MOLECULAR-WEIGHT: 324.183
NAME: UMP
STRUCTURE: chemicalStructure23401
SYNONYMS: uridylate
SYNONYMS: 5'-UMP
SYNONYMS: U
SYNONYMS: uridine-5'-monophosphate
SYNONYMS: 5'-uridylic acid (8CI)(9CI)
SYNONYMS: uridine-monophosphate
SYNONYMS: uridine-5'-phosphate
SYNONYMS: uridine-phosphate
XREF: unificationXref23400
XREF: unificationXref23399
XREF: unificationXref23398

chemicalStructure23401
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UMP-atom1" elementType="H" x2="6.3017" y2="-6.9907"/> <atom id="UMP-atom2" elementType="O" x2="8.6718" y2="-8.3025"/> <atom id="UMP-atom3" elementType="O" x2="6.3295" y2="-4.2426"/> <atom id="UMP-atom4" elementType="O" x2="1.3504" y2="-3.2567"/> <atom id="UMP-atom5" elementType="O" x2="4.5992" y2="-0.0021"/> <atom id="UMP-atom6" elementType="O" x2="7.5461" y2="0.0"/> <atom id="UMP-atom7" elementType="O" x2="0.0" y2="-1.9077"/> <atom id="UMP-atom8" elementType="O" x2="1.3463" y2="-0.5588"/> <atom id="UMP-atom9" elementType="C" x2="9.8588" y2="-6.279"/> <atom id="UMP-atom10" elementType="C" x2="9.8588" y2="-4.915"/> <atom id="UMP-atom11" elementType="C" x2="3.7053" y2="-2.8032"/> <atom id="UMP-atom12" elementType="O" x2="2.6993" y2="-1.9048"/> <atom id="UMP-atom13" elementType="O" x2="6.0703" y2="-3.1667"/> <atom id="UMP-atom14" elementType="C" x2="8.6754" y2="-6.9536"/> <atom id="UMP-atom15" elementType="C" x2="7.5073" y2="-4.915"/> <atom id="UMP-atom16" elementType="C" x2="5.3959" y2="-1.0907"/> <atom id="UMP-atom17" elementType="C" x2="6.7522" y2="-1.0907"/> <atom id="UMP-atom18" elementType="C" x2="4.9865" y2="-2.3814"/> <atom id="UMP-atom19" elementType="C" x2="7.1693" y2="-2.3814"/> <atom id="UMP-atom20" elementType="N" x2="7.5073" y2="-6.279"/> <atom id="UMP-atom21" elementType="N" x2="8.6754" y2="-4.2257"/> <atom id="UMP-atom22" elementType="P" x2="1.3489" y2="-1.9077"/> <bond id="UMP-bond1" atomRefs="UMP-atom19 UMP-atom21" order="1"/> <bond id="UMP-bond2" atomRefs="UMP-atom17 UMP-atom19" order="1"/> <bond id="UMP-bond3" atomRefs="UMP-atom16 UMP-atom18" order="1"/> <bond id="UMP-bond4" atomRefs="UMP-atom16 UMP-atom17" order="1"/> <bond id="UMP-bond5" atomRefs="UMP-atom15 UMP-atom21" order="A"/> <bond id="UMP-bond6" atomRefs="UMP-atom20 UMP-atom15" order="A"/> <bond id="UMP-bond7" atomRefs="UMP-atom14 UMP-atom20" order="A"/> <bond id="UMP-bond8" atomRefs="UMP-atom13 UMP-atom19" order="1"/> <bond id="UMP-bond9" atomRefs="UMP-atom13 UMP-atom18" order="1…

unificationXref23400
type: unificationXref
DB: CapCyc
ID: UMP

unificationXref23399
type: unificationXref
DB: CAS
ID: 58-97-9

unificationXref23398
type: unificationXref
DB: LIGAND
ID: C00105

phys-ent-participant23810
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23805
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23805
type: smallMolecule
MOLECULAR-WEIGHT: 112.088
NAME: uracil
STRUCTURE: chemicalStructure23809
XREF: unificationXref23808
XREF: unificationXref23807
XREF: unificationXref23806

chemicalStructure23809
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="URACIL-atom1" elementType="C" x2="0.38489208" y2="0.2086331"/> <atom id="URACIL-atom2" elementType="O" x2="-1.0" y2="-0.53956836"/> <atom id="URACIL-atom3" elementType="H" x2="-0.0647482" y2="-1.0"/> <atom id="URACIL-atom4" elementType="N" x2="-0.0647482" y2="-0.5827338"/> <atom id="URACIL-atom5" elementType="N" x2="-0.52517986" y2="0.2086331"/> <atom id="URACIL-atom6" elementType="C" x2="-0.52517986" y2="-0.31654677"/> <atom id="URACIL-atom7" elementType="O" x2="-0.0647482" y2="0.99640286"/> <atom id="URACIL-atom8" elementType="C" x2="-0.0647482" y2="0.47482014"/> <atom id="URACIL-atom9" elementType="C" x2="0.38489208" y2="-0.31654677"/> <atom id="URACIL-atom10" elementType="H" x2="-0.9856115" y2="0.46043167"/> <bond id="URACIL-bond1" atomRefs="URACIL-atom10 URACIL-atom5" order="1"/> <bond id="URACIL-bond2" atomRefs="URACIL-atom9 URACIL-atom4" order="A"/> <bond id="URACIL-bond3" atomRefs="URACIL-atom8 URACIL-atom1" order="A"/> <bond id="URACIL-bond4" atomRefs="URACIL-atom7 URACIL-atom8" order="2"/> <bond id="URACIL-bond5" atomRefs="URACIL-atom6 URACIL-atom5" order="A"/> <bond id="URACIL-bond6" atomRefs="URACIL-atom5 URACIL-atom8" order="A"/> <bond id="URACIL-bond7" atomRefs="URACIL-atom4 URACIL-atom3" order="1"/> <bond id="URACIL-bond8" atomRefs="URACIL-atom4 URACIL-atom6" order="A"/> <bond id="URACIL-bond9" atomRefs="URACIL-atom2 URACIL-atom6" order="2"/> <bond id="URACIL-bond10" atomRefs="URACIL-atom1 URACIL-atom9" order="A"/> <formula concise="C 4 H 4 N 2 O 2" formalCharge="0"/> 112.088 c1(=O)(cc[nH]c([nH]1)=O) 2,4-(1H,3H)-pyrimidinedione (9CI)

unificationXref23808
type: unificationXref
DB: CapCyc
ID: URACIL

unificationXref23807
type: unificationXref
DB: CAS
ID: 66-22-8

unificationXref23806
type: unificationXref
DB: LIGAND
ID: C00106

unificationXref26198
type: unificationXref
DB: CapCyc
ID: URACIL-PRIBOSYLTRANS-RXN

phys-ent-participant26203
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26201
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26201
type: protein
NAME: URACIL PHOSPHORIBOSYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref26202

unificationXref26202
type: unificationXref
DB: CapCyc
ID: SGNU203268-MONOMER

unificationXref26200
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-608

catalysis26185
type: catalysis
CONTROLLED: biochemicalReaction26161
CONTROLLER: phys-ent-participant26189
NAME: CYSTEINE SYNTHASE
XREF: unificationXref26186

biochemicalReaction26161
type: biochemicalReaction
EC-NUMBER: 2.5.1.47
LEFT: phys-ent-participant26168
LEFT: phys-ent-participant26174
NAME: Cysteine synthase
RIGHT: phys-ent-participant21356
RIGHT: phys-ent-participant21566
SYNONYMS: OAS sulfhydrylase
SYNONYMS: O-acetylserine sulfhydrylase
SYNONYMS: O-acetylserine (thiol)-lyase
XREF: unificationXref26162

unificationXref26162
type: unificationXref
DB: CapCyc
ID: ACSERLY-RXN

unificationXref26186
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-326

catalysis26180
type: catalysis
CONTROLLED: biochemicalReaction26161
CONTROLLER: phys-ent-participant26184
NAME: O-acetylserine (thiol) lyase
XREF: unificationXref26181

phys-ent-participant26184
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26182
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26182
type: protein
NAME: O-acetylserine (thiol) lyase
ORGANISM: bioSource20982
XREF: unificationXref26183

unificationXref26183
type: unificationXref
DB: CapCyc
ID: SGNU199729-MONOMER

unificationXref26181
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-373

catalysis26175
type: catalysis
CONTROLLED: biochemicalReaction26161
CONTROLLER: phys-ent-participant26179
NAME: CYSTEINE SYNTHASE
XREF: unificationXref26176

unificationXref26176
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-558

catalysis26154
type: catalysis
CONTROLLED: biochemicalReaction26142
CONTROLLER: phys-ent-participant26158
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
XREF: unificationXref26155

biochemicalReaction26142
type: biochemicalReaction
EC-NUMBER: 2.5.1.54
LEFT: phys-ent-participant22579
LEFT: phys-ent-participant20970
NAME: 2-dehydro-3-deoxyphosphoheptonate aldolase
RIGHT: phys-ent-participant23048
RIGHT: phys-ent-participant23169
RIGHT: phys-ent-participant20951
SYNONYMS: KDPH synthase
SYNONYMS: DHAP synthase
SYNONYMS: Phospho-2-keto-3-deoxyheptonate aldolase
SYNONYMS: Phospho-2-dehydro-3-deoxyheptonate aldolase
XREF: unificationXref26143

phys-ent-participant22579
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22574
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22574
type: smallMolecule
MOLECULAR-WEIGHT: 288.147
NAME: 3-deoxy-D-arabino-heptulosonate-7-phosphate
STRUCTURE: chemicalStructure22578
SYNONYMS: 3-deoxy-D-arabino-heptulosonate-7-P
SYNONYMS: 3-deoxy-arabino-heptulosonate 7-phosphate
SYNONYMS: 3-deoxy-arabino-heptulosonate-7-P
SYNONYMS: 2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate
XREF: unificationXref22577
XREF: unificationXref22576
XREF: unificationXref22575

chemicalStructure22578
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom1" elementType="O" x2="-0.50331" y2="0.5"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom2" elementType="C" x2="-0.74834" y2="-0.25497"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom3" elementType="O" x2="-0.01656" y2="-0.75497"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom4" elementType="O" x2="-0.74834" y2="0.99669"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom5" elementType="O" x2="-0.50662" y2="-0.75497"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom6" elementType="P" x2="-0.26159" y2="-0.75497"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom7" elementType="C" x2="-0.74834" y2="0.24834"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom8" elementType="O" x2="-0.50993" y2="-0.25497"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom9" elementType="O" x2="-0.26159" y2="-1.0"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom10" elementType="O" x2="-1.0" y2="-0.00331"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom11" elementType="C" x2="-0.74834" y2="0.75166"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom12" elementType="C" x2="-0.74834" y2="-0.00331"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom13" elementType="C" x2="-0.74834" y2="0.5"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom14" elementType="C" x2="-0.74834" y2="-0.50662"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom15" elementType="O" x2="-0.26159" y2="-0.50993"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom16" elementType="O" x2="-0.50993" y2="-0.50662"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom17" elementType="O" x2="-0.50331" y2="0.75166"/> <atom id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom18" elementType="C" x2="-0.74834" y2="-0.75497"/> <bond id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-bond1" atomRefs="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom18 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-atom5" order="1"/> <bond id="3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P-bond2" atomRefs="3-DEOXY…

unificationXref22577
type: unificationXref
DB: CapCyc
ID: 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P

unificationXref22576
type: unificationXref
DB: CAS
ID: 2627-73-8

unificationXref22575
type: unificationXref
DB: LIGAND
ID: C04691

phys-ent-participant23048
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20862
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20862
type: smallMolecule
MOLECULAR-WEIGHT: 168.043
NAME: phosphoenolpyruvate
STRUCTURE: chemicalStructure20868
SYNONYMS: P-enol-pyruvate
SYNONYMS: P-enol-pyr
SYNONYMS: PEP
XREF: unificationXref20867
XREF: unificationXref20866
XREF: unificationXref20865
XREF: unificationXref20864
XREF: unificationXref20863

chemicalStructure20868
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PHOSPHO-ENOL-PYRUVATE-atom1" elementType="O" x2="-0.57576" y2="-0.15789"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom2" elementType="O" x2="0.24721" y2="0.33652"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom3" elementType="O" x2="-1.0" y2="-0.57576"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom4" elementType="C" x2="-0.57576" y2="0.26635"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom5" elementType="C" x2="-0.9075" y2="0.52791"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom6" elementType="O" x2="-0.15152" y2="-0.57576"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom7" elementType="O" x2="-0.57576" y2="-1.0"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom8" elementType="O" x2="-0.10686" y2="0.99681"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom9" elementType="P" x2="-0.57576" y2="-0.57576"/> <atom id="PHOSPHO-ENOL-PYRUVATE-atom10" elementType="C" x2="-0.10686" y2="0.57257"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond1" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom10 PHOSPHO-ENOL-PYRUVATE-atom4" order="1"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond2" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom8 PHOSPHO-ENOL-PYRUVATE-atom10" order="2"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond3" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom7 PHOSPHO-ENOL-PYRUVATE-atom9" order="2"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond4" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom6 PHOSPHO-ENOL-PYRUVATE-atom9" order="1"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond5" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom5 PHOSPHO-ENOL-PYRUVATE-atom4" order="2"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond6" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom4 PHOSPHO-ENOL-PYRUVATE-atom1" order="1"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond7" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom3 PHOSPHO-ENOL-PYRUVATE-atom9" order="1"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond8" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom2 PHOSPHO-ENOL-PYRUVATE-atom10" order="1"/> <bond id="PHOSPHO-ENOL-PYRUVATE-bond9" atomRefs="PHOSPHO-ENOL-PYRUVATE-atom1 PHOSPHO-ENOL-PYRUVATE-atom9" order="1"/> <formula concise="C 3 H 5 O 6 P 1" formalCharge="0"/> 168.043 C=C(C(=O)O)OP(O)(=O)O

unificationXref20867
type: unificationXref
DB: CapCyc
ID: PHOSPHO-ENOL-PYRUVATE

unificationXref20866
type: unificationXref
DB: CAS
ID: 73-89-2

unificationXref20865
type: unificationXref
DB: LIGAND
ID: c00074

unificationXref20864
type: unificationXref
DB: LIGAND
ID: C00074

unificationXref20863
type: unificationXref
DB: CAS
ID: 138-08-9

unificationXref26143
type: unificationXref
DB: CapCyc
ID: DAHPSYN-RXN

phys-ent-participant26158
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26156
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26156
type: protein
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26157

unificationXref26157
type: unificationXref
DB: CapCyc
ID: SGNU196459-MONOMER

unificationXref26155
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-64

catalysis26149
type: catalysis
CONTROLLED: biochemicalReaction26142
CONTROLLER: phys-ent-participant26153
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
XREF: unificationXref26150

phys-ent-participant26153
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26151
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26151
type: protein
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26152

unificationXref26152
type: unificationXref
DB: CapCyc
ID: SGNU196464-MONOMER

unificationXref26150
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-65

catalysis26144
type: catalysis
CONTROLLED: biochemicalReaction26142
CONTROLLER: phys-ent-participant26148
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
XREF: unificationXref26145

phys-ent-participant26148
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26146
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26146
type: protein
NAME: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref26147

unificationXref26147
type: unificationXref
DB: CapCyc
ID: SGNU197628-MONOMER

unificationXref26145
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-205

catalysis26125
type: catalysis
CONTROLLED: biochemicalReaction26089
CONTROLLER: phys-ent-participant26088
NAME: FARNESYL DIPHOSPHATE SYNTHASE
XREF: unificationXref26126

biochemicalReaction26089
type: biochemicalReaction
EC-NUMBER: 2.5.1.10
LEFT: phys-ent-participant22005
LEFT: phys-ent-participant26078
LEFT: phys-ent-participant22010
NAME: geranyltranstransferase
RIGHT: phys-ent-participant21108
RIGHT: phys-ent-participant26122
SYNONYMS: farnesyl pyrophosphate synthase
SYNONYMS: farnesyl diphosphate synthase
SYNONYMS: FPP synthase
SYNONYMS: FPP synthetase
SYNONYMS: Farnesyl diphosphate synthetase
SYNONYMS: Farnesyl pyrophosphate synthetase
SYNONYMS: Farnesyl-diphosphate synthase
XREF: unificationXref26116
XREF: unificationXref26115
XREF: unificationXref26114
XREF: unificationXref26113
XREF: unificationXref26112
XREF: unificationXref26111
XREF: unificationXref26110
XREF: unificationXref26109
XREF: unificationXref26108
XREF: unificationXref26107
XREF: unificationXref26106
XREF: unificationXref26105
XREF: unificationXref26104
XREF: unificationXref26103
XREF: unificationXref26102
XREF: unificationXref26101
XREF: unificationXref26100
XREF: unificationXref26099
XREF: unificationXref26098
XREF: unificationXref26097
XREF: unificationXref26096
XREF: unificationXref26095
XREF: unificationXref26094
XREF: unificationXref26093
XREF: unificationXref26092
XREF: unificationXref26091
XREF: unificationXref26090

phys-ent-participant22005
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22001
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22001
type: smallMolecule
MOLECULAR-WEIGHT: 246.093
NAME: isopentenyl diphosphate
STRUCTURE: chemicalStructure22004
SYNONYMS: isopentenyl diphosphate
SYNONYMS: isopentenyl-pp
SYNONYMS: isopentenyl pyrophosphate
SYNONYMS: IPP
SYNONYMS: δ(3)-isopentenyl-PP
SYNONYMS: Δ3-isopentenyl-PP
XREF: unificationXref22003
XREF: unificationXref22002

chemicalStructure22004
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DELTA3-ISOPENTENYL-PP-atom1" elementType="O" x2="-29700.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom2" elementType="O" x2="-21450.0" y2="-31682.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom3" elementType="C" x2="20544.0" y2="-18352.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom4" elementType="P" x2="-21450.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom5" elementType="C" x2="28054.0" y2="-24065.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom6" elementType="O" x2="-21450.0" y2="-15178.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom7" elementType="P" x2="-2940.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom8" elementType="O" x2="-2940.0" y2="-31682.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom9" elementType="C" x2="28054.0" y2="-32315.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom10" elementType="O" x2="5947.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom11" elementType="O" x2="-11506.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom12" elementType="C" x2="14514.0" y2="-23428.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom13" elementType="C" x2="34823.0" y2="-19408.0"/> <atom id="DELTA3-ISOPENTENYL-PP-atom14" elementType="O" x2="-2940.0" y2="-15178.0"/> <bond id="DELTA3-ISOPENTENYL-PP-bond1" atomRefs="DELTA3-ISOPENTENYL-PP-atom14 DELTA3-ISOPENTENYL-PP-atom7" order="2"/> <bond id="DELTA3-ISOPENTENYL-PP-bond2" atomRefs="DELTA3-ISOPENTENYL-PP-atom13 DELTA3-ISOPENTENYL-PP-atom5" order="1"/> <bond id="DELTA3-ISOPENTENYL-PP-bond3" atomRefs="DELTA3-ISOPENTENYL-PP-atom12 DELTA3-ISOPENTENYL-PP-atom10" order="1"/> <bond id="DELTA3-ISOPENTENYL-PP-bond4" atomRefs="DELTA3-ISOPENTENYL-PP-atom11 DELTA3-ISOPENTENYL-PP-atom4" order="1"/> <bond id="DELTA3-ISOPENTENYL-PP-bond5" atomRefs="DELTA3-ISOPENTENYL-PP-atom10 DELTA3-ISOPENTENYL-PP-atom7" order="1"/> <bond id="DELTA3-ISOPENTENYL-PP-bond6" atomRefs="DELTA3-ISOPENTENYL-PP-atom9 DELTA3-ISOPENTENYL-PP-atom5" order="1"/> <bond id="DELTA3-ISOPENTENYL-PP-bond7" atomRefs="DELTA3-ISOPENTENYL-PP-atom8 DELTA3-ISOPENTENYL-PP-at…

unificationXref22003
type: unificationXref
DB: CapCyc
ID: DELTA3-ISOPENTENYL-PP

unificationXref22002
type: unificationXref
DB: LIGAND
ID: C00129

phys-ent-participant26078
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26074
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26074
type: smallMolecule
MOLECULAR-WEIGHT: 314.211
NAME: geranyl-PP
STRUCTURE: chemicalStructure26077
SYNONYMS: geranyl-PP
SYNONYMS: GPP
SYNONYMS: geranyl-diphosphate
SYNONYMS: geranyl-pyrophosphate
XREF: unificationXref26076
XREF: unificationXref26075

chemicalStructure26077
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GERANYL-PP-atom1" elementType="O" x2="0.25628" y2="-0.8258"/> <atom id="GERANYL-PP-atom2" elementType="C" x2="-0.09883" y2="-0.83585"/> <atom id="GERANYL-PP-atom3" elementType="O" x2="0.43719" y2="-1.0"/> <atom id="GERANYL-PP-atom4" elementType="P" x2="0.82245" y2="-0.8258"/> <atom id="GERANYL-PP-atom5" elementType="C" x2="-0.24958" y2="-0.74874"/> <atom id="GERANYL-PP-atom6" elementType="O" x2="0.82245" y2="-0.65159"/> <atom id="GERANYL-PP-atom7" elementType="P" x2="0.43719" y2="-0.8258"/> <atom id="GERANYL-PP-atom8" elementType="C" x2="-0.70184" y2="-0.83585"/> <atom id="GERANYL-PP-atom9" elementType="C" x2="0.06198" y2="-0.73534"/> <atom id="GERANYL-PP-atom10" elementType="C" x2="-1.0" y2="-0.83585"/> <atom id="GERANYL-PP-atom11" elementType="C" x2="-0.84925" y2="-0.74874"/> <atom id="GERANYL-PP-atom12" elementType="C" x2="-0.24958" y2="-0.57454"/> <atom id="GERANYL-PP-atom13" elementType="O" x2="0.61474" y2="-0.8258"/> <atom id="GERANYL-PP-atom14" elementType="O" x2="0.82245" y2="-1.0"/> <atom id="GERANYL-PP-atom15" elementType="O" x2="0.99665" y2="-0.8258"/> <atom id="GERANYL-PP-atom16" elementType="O" x2="0.43719" y2="-0.65159"/> <atom id="GERANYL-PP-atom17" elementType="C" x2="-0.40034" y2="-0.83585"/> <atom id="GERANYL-PP-atom18" elementType="C" x2="-0.84925" y2="-0.57454"/> <atom id="GERANYL-PP-atom19" elementType="C" x2="-0.55109" y2="-0.74874"/> <bond id="GERANYL-PP-bond1" atomRefs="GERANYL-PP-atom19 GERANYL-PP-atom17" order="1"/> <bond id="GERANYL-PP-bond2" atomRefs="GERANYL-PP-atom18 GERANYL-PP-atom11" order="1"/> <bond id="GERANYL-PP-bond3" atomRefs="GERANYL-PP-atom17 GERANYL-PP-atom5" order="1"/> <bond id="GERANYL-PP-bond4" atomRefs="GERANYL-PP-atom16 GERANYL-PP-atom7" order="2"/> <bond id="GERANYL-PP-bond5" atomRefs="GERANYL-PP-atom15 GERANYL-PP-atom4" order="1"/> <bond id="GERANYL-PP-bond6" atomRefs="GERANYL-PP-atom14 GERANYL-PP-atom4" order="1"/> <bond id="GERANYL-PP-bond7" atomRefs="GERANYL-PP-atom13 GERANYL-PP-atom4" order="1"/> <bond i…

unificationXref26076
type: unificationXref
DB: CapCyc
ID: GERANYL-PP

unificationXref26075
type: unificationXref
DB: LIGAND
ID: C00341

phys-ent-participant22010
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22006
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22006
type: smallMolecule
MOLECULAR-WEIGHT: 246.093
NAME: delta3-isopentenyl-PP
STRUCTURE: chemicalStructure22009
SYNONYMS: isopentenyl-pp
SYNONYMS: isopentenyl diphosphate
SYNONYMS: IPP
SYNONYMS: δ(3)-isopentenyl-PP
SYNONYMS: isopentenyl pyrophosphate
XREF: unificationXref22008
XREF: unificationXref22007

chemicalStructure22009
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="delta(3)-isopentenyl-pp-atom1" elementType="O" x2="0.99673" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom2" elementType="O" x2="0.74141" y2="-0.98036"/> <atom id="delta(3)-isopentenyl-pp-atom3" elementType="C" x2="-0.5581" y2="-0.56792"/> <atom id="delta(3)-isopentenyl-pp-atom4" elementType="P" x2="0.74141" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom5" elementType="C" x2="-0.79051" y2="-0.74468"/> <atom id="delta(3)-isopentenyl-pp-atom6" elementType="O" x2="0.74141" y2="-0.46972"/> <atom id="delta(3)-isopentenyl-pp-atom7" elementType="P" x2="0.16858" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom8" elementType="O" x2="0.16858" y2="-0.98036"/> <atom id="delta(3)-isopentenyl-pp-atom9" elementType="C" x2="-0.79051" y2="-1.0"/> <atom id="delta(3)-isopentenyl-pp-atom10" elementType="O" x2="-0.10638" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom11" elementType="O" x2="0.43372" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom12" elementType="C" x2="-0.37152" y2="-0.72504"/> <atom id="delta(3)-isopentenyl-pp-atom13" elementType="C" x2="-1.0" y2="-0.60065"/> <atom id="delta(3)-isopentenyl-pp-atom14" elementType="O" x2="0.16858" y2="-0.46972"/> <bond id="delta(3)-isopentenyl-pp-bond1" atomRefs="delta(3)-isopentenyl-pp-atom14 delta(3)-isopentenyl-pp-atom7" order="2"/> <bond id="delta(3)-isopentenyl-pp-bond2" atomRefs="delta(3)-isopentenyl-pp-atom13 delta(3)-isopentenyl-pp-atom5" order="2"/> <bond id="delta(3)-isopentenyl-pp-bond3" atomRefs="delta(3)-isopentenyl-pp-atom12 delta(3)-isopentenyl-pp-atom10" order="1"/> <bond id="delta(3)-isopentenyl-pp-bond4" atomRefs="delta(3)-isopentenyl-pp-atom11 delta(3)-isopentenyl-pp-atom4" order="1"/> <bond id="delta(3)-isopentenyl-pp-bond5" atomRefs="delta(3)-isopentenyl-pp-atom10 delta(3)-isopentenyl-pp-atom7" order="1"/> <bond id="delta(3)-isopentenyl-pp-bond6" atomRefs="delta(3)-isopentenyl-pp-atom9 delta(3)-isopentenyl-pp-atom5" order="1"/> <bond id="delta(3)-isopentenyl-pp-bond7" ato…

unificationXref22008
type: unificationXref
DB: CapCyc
ID: delta(3)-isopentenyl-pp

unificationXref22007
type: unificationXref
DB: LIGAND
ID: C00129

phys-ent-participant26122
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule26117
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule26117
type: smallMolecule
MOLECULAR-WEIGHT: 382.33
NAME: trans, trans-farnesyl diphosphate
STRUCTURE: chemicalStructure26121
SYNONYMS: (E,E)-farnesyl diphosphate
SYNONYMS: 2-trans,6-trans-farnesyl diphosphate
SYNONYMS: trans, trans-farnesyl diphosphate
SYNONYMS: FPP
SYNONYMS: farnesyl pyrophosphate
SYNONYMS: farnesyl-PP
SYNONYMS: farnesyl diphosphate
XREF: unificationXref26120
XREF: unificationXref26119
XREF: unificationXref26118

chemicalStructure26121
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FARNESYL-PP-atom1" elementType="C" x2="-1.0" y2="-0.85785"/> <atom id="FARNESYL-PP-atom2" elementType="C" x2="-0.87438" y2="-0.79174"/> <atom id="FARNESYL-PP-atom3" elementType="O" x2="0.42479" y2="-0.85785"/> <atom id="FARNESYL-PP-atom4" elementType="C" x2="-0.87438" y2="-0.64959"/> <atom id="FARNESYL-PP-atom5" elementType="O" x2="0.99669" y2="-0.85785"/> <atom id="FARNESYL-PP-atom6" elementType="P" x2="0.85455" y2="-0.85785"/> <atom id="FARNESYL-PP-atom7" elementType="C" x2="0.04132" y2="-0.80165"/> <atom id="FARNESYL-PP-atom8" elementType="O" x2="0.85455" y2="-0.7157"/> <atom id="FARNESYL-PP-atom9" elementType="P" x2="0.56364" y2="-0.85785"/> <atom id="FARNESYL-PP-atom10" elementType="C" x2="0.15702" y2="-0.86777"/> <atom id="FARNESYL-PP-atom11" elementType="O" x2="0.85455" y2="-1.0"/> <atom id="FARNESYL-PP-atom12" elementType="C" x2="-0.18678" y2="-0.80165"/> <atom id="FARNESYL-PP-atom13" elementType="C" x2="-0.41818" y2="-0.80165"/> <atom id="FARNESYL-PP-atom14" elementType="C" x2="0.04132" y2="-0.6595"/> <atom id="FARNESYL-PP-atom15" elementType="C" x2="-0.53058" y2="-0.86777"/> <atom id="FARNESYL-PP-atom16" elementType="O" x2="0.69587" y2="-0.85785"/> <atom id="FARNESYL-PP-atom17" elementType="C" x2="-0.30248" y2="-0.86777"/> <atom id="FARNESYL-PP-atom18" elementType="C" x2="-0.76198" y2="-0.85785"/> <atom id="FARNESYL-PP-atom19" elementType="O" x2="0.56364" y2="-0.7157"/> <atom id="FARNESYL-PP-atom20" elementType="C" x2="-0.41818" y2="-0.6595"/> <atom id="FARNESYL-PP-atom21" elementType="C" x2="0.27603" y2="-0.79174"/> <atom id="FARNESYL-PP-atom22" elementType="C" x2="-0.64628" y2="-0.79504"/> <atom id="FARNESYL-PP-atom23" elementType="O" x2="0.56364" y2="-1.0"/> <atom id="FARNESYL-PP-atom24" elementType="C" x2="-0.07438" y2="-0.86777"/> <bond id="FARNESYL-PP-bond1" atomRefs="FARNESYL-PP-atom24 FARNESYL-PP-atom7" order="1"/> <bond id="FARNESYL-PP-bond2" atomRefs="FARNESYL-PP-atom23 FARNESYL-PP-atom9" order="1"/> <bond id="FARNESYL-PP-bond3" atomRef…

unificationXref26120
type: unificationXref
DB: CapCyc
ID: FARNESYL-PP

unificationXref26119
type: unificationXref
DB: CAS
ID: 13058-04-3

unificationXref26118
type: unificationXref
DB: LIGAND
ID: C00448

unificationXref26116
type: unificationXref
DB: CapCyc
ID: FPPSYN-RXN

unificationXref26115
type: unificationXref
DB: UniProtKB
ID: P08524

unificationXref26114
type: unificationXref
DB: UniProtKB
ID: P05369

unificationXref26113
type: unificationXref
DB: UniProtKB
ID: P14324

unificationXref26112
type: unificationXref
DB: UniProtKB
ID: Q9CH81

unificationXref26111
type: unificationXref
DB: UniProtKB
ID: Q9PM32

unificationXref26110
type: unificationXref
DB: UniProtKB
ID: P45204

unificationXref26109
type: unificationXref
DB: UniProtKB
ID: Q9JSM0

unificationXref26108
type: unificationXref
DB: UniProtKB
ID: P49350

unificationXref26107
type: unificationXref
DB: UniProtKB
ID: P22939

unificationXref26106
type: unificationXref
DB: UniProtKB
ID: Q08291

unificationXref26105
type: unificationXref
DB: UniProtKB
ID: P49349

unificationXref26104
type: unificationXref
DB: UniProtKB
ID: Q09152

unificationXref26103
type: unificationXref
DB: UniProtKB
ID: P49351

unificationXref26102
type: unificationXref
DB: UniProtKB
ID: P49352

unificationXref26101
type: unificationXref
DB: UniProtKB
ID: Q43315

unificationXref26100
type: unificationXref
DB: UniProtKB
ID: O24241

unificationXref26099
type: unificationXref
DB: UniProtKB
ID: O24242

unificationXref26098
type: unificationXref
DB: UniProtKB
ID: Q92334

unificationXref26097
type: unificationXref
DB: UniProtKB
ID: Q92218

unificationXref26096
type: unificationXref
DB: UniProtKB
ID: Q92235

unificationXref26095
type: unificationXref
DB: UniProtKB
ID: Q92250

unificationXref26094
type: unificationXref
DB: UniProtKB
ID: Q8L7F4

unificationXref26093
type: unificationXref
DB: UniProtKB
ID: P49353

unificationXref26092
type: unificationXref
DB: UniProtKB
ID: O04882

unificationXref26091
type: unificationXref
DB: UniProtKB
ID: O65004

unificationXref26090
type: unificationXref
DB: UniProtKB
ID: O14230

phys-ent-participant26088
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26086
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26086
type: protein
NAME: FARNESYL DIPHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26087

unificationXref26087
type: unificationXref
DB: CapCyc
ID: SGNU196846-MONOMER

unificationXref26126
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-107

catalysis26123
type: catalysis
CONTROLLED: biochemicalReaction26089
CONTROLLER: phys-ent-participant26083
NAME: FARNESYL DIPHOSPHATE SYNTHASE
XREF: unificationXref26124

phys-ent-participant26083
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26081
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26081
type: protein
NAME: FARNESYL DIPHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26082

unificationXref26082
type: unificationXref
DB: CapCyc
ID: SGNU199165-MONOMER

unificationXref26124
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-746

catalysis26084
type: catalysis
CONTROLLED: biochemicalReaction26050
CONTROLLER: phys-ent-participant26088
NAME: FARNESYL DIPHOSPHATE SYNTHASE
XREF: unificationXref26085

biochemicalReaction26050
type: biochemicalReaction
EC-NUMBER: 2.5.1.1
LEFT: phys-ent-participant22005
LEFT: phys-ent-participant22016
LEFT: phys-ent-participant22010
NAME: Dimethylallyltransferase
RIGHT: phys-ent-participant21108
RIGHT: phys-ent-participant26078
SYNONYMS: Geranyl-diphosphate synthase
SYNONYMS: Prenyltransferase
XREF: unificationXref26073
XREF: unificationXref26072
XREF: unificationXref26071
XREF: unificationXref26070
XREF: unificationXref26069
XREF: unificationXref26068
XREF: unificationXref26067
XREF: unificationXref26066
XREF: unificationXref26065
XREF: unificationXref26064
XREF: unificationXref26063
XREF: unificationXref26062
XREF: unificationXref26061
XREF: unificationXref26060
XREF: unificationXref26059
XREF: unificationXref26058
XREF: unificationXref26057
XREF: unificationXref26056
XREF: unificationXref26055
XREF: unificationXref26054
XREF: unificationXref26053
XREF: unificationXref26052
XREF: unificationXref26051

phys-ent-participant22016
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22011
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22011
type: smallMolecule
MOLECULAR-WEIGHT: 246.093
NAME: dimethylallyl-pyrophosphate
STRUCTURE: chemicalStructure22015
SYNONYMS: prenyl-diphosphate
SYNONYMS: δ-prenyl diphosphate
SYNONYMS: δ2-isopentenyl-diphosphate
SYNONYMS: 2-isopentenyl diphosphate
SYNONYMS: prenyl diphosphate
SYNONYMS: DMAPP
SYNONYMS: DPP
SYNONYMS: dimethylallyl-diphosphate
SYNONYMS: di-CH3-allyl-PPi
SYNONYMS: dimethylallyl-PP
SYNONYMS: dimethylallyl-PPi
SYNONYMS: DMPP
XREF: unificationXref22014
XREF: unificationXref22013
XREF: unificationXref22012

chemicalStructure22015
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-4211-atom1" elementType="O" x2="-4.1627" y2="-0.8885"/> <atom id="CPD-4211-atom2" elementType="P" x2="-4.5694" y2="-1.6063"/> <atom id="CPD-4211-atom3" elementType="O" x2="-3.8516" y2="-2.0129"/> <atom id="CPD-4211-atom4" elementType="O" x2="-4.976" y2="-2.3241"/> <atom id="CPD-4211-atom5" elementType="P" x2="-6.005" y2="-0.7929"/> <atom id="CPD-4211-atom6" elementType="O" x2="-5.2871" y2="-1.1996"/> <atom id="CPD-4211-atom7" elementType="O" x2="-6.7228" y2="-0.3863"/> <atom id="CPD-4211-atom8" elementType="O" x2="-5.5983" y2="-0.0752"/> <atom id="CPD-4211-atom9" elementType="O" x2="-6.4117" y2="-1.5108"/> <atom id="CPD-4211-atom10" elementType="C" x2="-3.3377" y2="-0.8885"/> <atom id="CPD-4211-atom11" elementType="C" x2="-2.9252" y2="-1.603"/> <atom id="CPD-4211-atom12" elementType="C" x2="-2.1002" y2="-1.603"/> <atom id="CPD-4211-atom13" elementType="C" x2="-1.6877" y2="-0.8885"/> <atom id="CPD-4211-atom14" elementType="C" x2="-1.6877" y2="-2.3174"/> <bond id="CPD-4211-bond1" atomRefs="CPD-4211-atom12 CPD-4211-atom14" order="1"/> <bond id="CPD-4211-bond2" atomRefs="CPD-4211-atom12 CPD-4211-atom13" order="1"/> <bond id="CPD-4211-bond3" atomRefs="CPD-4211-atom11 CPD-4211-atom12" order="2"/> <bond id="CPD-4211-bond4" atomRefs="CPD-4211-atom10 CPD-4211-atom11" order="1"/> <bond id="CPD-4211-bond5" atomRefs="CPD-4211-atom10 CPD-4211-atom1" order="1"/> <bond id="CPD-4211-bond6" atomRefs="CPD-4211-atom5 CPD-4211-atom8" order="2"/> <bond id="CPD-4211-bond7" atomRefs="CPD-4211-atom5 CPD-4211-atom7" order="1"/> <bond id="CPD-4211-bond8" atomRefs="CPD-4211-atom5 CPD-4211-atom6" order="1"/> <bond id="CPD-4211-bond9" atomRefs="CPD-4211-atom9 CPD-4211-atom5" order="1"/> <bond id="CPD-4211-bond10" atomRefs="CPD-4211-atom2 CPD-4211-atom4" order="2"/> <bond id="CPD-4211-bond11" atomRefs="CPD-4211-atom2 CPD-4211-atom3" order="1"/> <bond id="CPD-4211-bond12" atomRefs="CPD-4211-atom2 CPD-4211-atom6" order="1"/> <bond id="CPD-4211-bond13" atomRefs="CPD-4211-atom1 CPD-421…

unificationXref22014
type: unificationXref
DB: CapCyc
ID: CPD-4211

unificationXref22013
type: unificationXref
DB: CAS
ID: 358-71-4

unificationXref22012
type: unificationXref
DB: LIGAND
ID: C00235

unificationXref26073
type: unificationXref
DB: CapCyc
ID: GPPSYN-RXN

unificationXref26072
type: unificationXref
DB: UniProtKB
ID: P08524

unificationXref26071
type: unificationXref
DB: UniProtKB
ID: P05369

unificationXref26070
type: unificationXref
DB: UniProtKB
ID: P14324

unificationXref26069
type: unificationXref
DB: UniProtKB
ID: P46376

unificationXref26068
type: unificationXref
DB: UniProtKB
ID: Q45220

unificationXref26067
type: unificationXref
DB: UniProtKB
ID: P49350

unificationXref26066
type: unificationXref
DB: UniProtKB
ID: Q50891

unificationXref26065
type: unificationXref
DB: UniProtKB
ID: P49349

unificationXref26064
type: unificationXref
DB: UniProtKB
ID: Q09152

unificationXref26063
type: unificationXref
DB: UniProtKB
ID: P49351

unificationXref26062
type: unificationXref
DB: UniProtKB
ID: P49352

unificationXref26061
type: unificationXref
DB: UniProtKB
ID: Q43315

unificationXref26060
type: unificationXref
DB: UniProtKB
ID: O24241

unificationXref26059
type: unificationXref
DB: UniProtKB
ID: O24242

unificationXref26058
type: unificationXref
DB: UniProtKB
ID: Q92334

unificationXref26057
type: unificationXref
DB: UniProtKB
ID: Q92218

unificationXref26056
type: unificationXref
DB: UniProtKB
ID: Q92235

unificationXref26055
type: unificationXref
DB: UniProtKB
ID: Q92250

unificationXref26054
type: unificationXref
DB: UniProtKB
ID: Q8L7F4

unificationXref26053
type: unificationXref
DB: UniProtKB
ID: P49353

unificationXref26052
type: unificationXref
DB: UniProtKB
ID: O04882

unificationXref26051
type: unificationXref
DB: UniProtKB
ID: O65004

unificationXref26085
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-108

catalysis26079
type: catalysis
CONTROLLED: biochemicalReaction26050
CONTROLLER: phys-ent-participant26083
NAME: FARNESYL DIPHOSPHATE SYNTHASE
XREF: unificationXref26080

unificationXref26080
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-747

catalysis26003
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant26007
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref26004

biochemicalReaction25959
type: biochemicalReaction
EC-NUMBER: 2.5.1.16
LEFT: phys-ent-participant23432
LEFT: phys-ent-participant23324
NAME: Spermidine synthase
RIGHT: phys-ent-participant25966
RIGHT: phys-ent-participant25972
SYNONYMS: Aminopropyltransferase
SYNONYMS: Putrescine aminopropyltransferase
XREF: unificationXref25960

phys-ent-participant23432
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23427
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23427
type: smallMolecule
MOLECULAR-WEIGHT: 88.152
NAME: putrescine
STRUCTURE: chemicalStructure23431
SYNONYMS: 1,4-diaminobutane
SYNONYMS: 1,4-butanediamine
SYNONYMS: tetramethylenediamine
SYNONYMS: putrescine
XREF: unificationXref23430
XREF: unificationXref23429
XREF: unificationXref23428

chemicalStructure23431
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PUTRESCINE-atom1" elementType="N" x2="-1.0" y2="-1.0"/> <atom id="PUTRESCINE-atom2" elementType="C" x2="0.19472" y2="-0.76898"/> <atom id="PUTRESCINE-atom3" elementType="C" x2="-0.60066" y2="-0.76898"/> <atom id="PUTRESCINE-atom4" elementType="N" x2="0.9967" y2="-0.76898"/> <atom id="PUTRESCINE-atom5" elementType="C" x2="0.59736" y2="-1.0"/> <atom id="PUTRESCINE-atom6" elementType="C" x2="-0.20132" y2="-1.0"/> <bond id="PUTRESCINE-bond1" atomRefs="PUTRESCINE-atom6 PUTRESCINE-atom3" order="1"/> <bond id="PUTRESCINE-bond2" atomRefs="PUTRESCINE-atom5 PUTRESCINE-atom2" order="1"/> <bond id="PUTRESCINE-bond3" atomRefs="PUTRESCINE-atom4 PUTRESCINE-atom5" order="1"/> <bond id="PUTRESCINE-bond4" atomRefs="PUTRESCINE-atom3 PUTRESCINE-atom1" order="1"/> <bond id="PUTRESCINE-bond5" atomRefs="PUTRESCINE-atom2 PUTRESCINE-atom6" order="1"/> <formula concise="C 4 H 12 N 2" formalCharge="0"/> 88.152 C(N)CCCN 1,4-butanediamine

unificationXref23430
type: unificationXref
DB: CapCyc
ID: PUTRESCINE

unificationXref23429
type: unificationXref
DB: CAS
ID: 110-60-1

unificationXref23428
type: unificationXref
DB: LIGAND
ID: C00134

phys-ent-participant23324
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23320
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23320
type: smallMolecule
MOLECULAR-WEIGHT: 355.434
NAME: S-adenosyl-L-methioninamine
STRUCTURE: chemicalStructure23323
SYNONYMS: decarboxylated AdoMet
SYNONYMS: (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt
SYNONYMS: decarboxylated SAM
SYNONYMS: S-adenosylmethioninamine
SYNONYMS: decarboxylated S-adenosylmethionine
SYNONYMS: dAdoMet
SYNONYMS: S-methyl-S-adenosyl homocysteamine
SYNONYMS: 3-amino-propyl-S-adenosine
XREF: unificationXref23322
XREF: unificationXref23321

chemicalStructure23323
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="S-ADENOSYLMETHIONINAMINE-atom1" elementType="N" x2="0.3706" y2="11.2786"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom2" elementType="C" x2="1.3567" y2="12.1707"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom3" elementType="C" x2="2.6612" y2="11.8086"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom4" elementType="C" x2="3.1403" y2="10.5358"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom5" elementType="S" x2="4.4968" y2="10.5736" formalCharge="1"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom6" elementType="O" x2="10.337" y2="13.3607"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom7" elementType="O" x2="7.3969" y2="13.3761"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom8" elementType="O" x2="8.8331" y2="10.2045"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom9" elementType="C" x2="9.949" y2="11.0113"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom10" elementType="C" x2="9.5386" y2="12.2784"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom11" elementType="C" x2="8.1689" y2="12.2784"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom12" elementType="C" x2="7.7434" y2="10.9919"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom13" elementType="N" x2="8.3426" y2="9.0072"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom14" elementType="C" x2="7.1954" y2="8.2715"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom15" elementType="N" x2="7.1721" y2="6.9685"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom16" elementType="C" x2="8.3551" y2="6.2917"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom17" elementType="C" x2="9.5256" y2="8.3304"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom18" elementType="C" x2="9.5282" y2="6.9844"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom19" elementType="N" x2="10.8118" y2="6.5771"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom20" elementType="C" x2="11.5923" y2="7.6555"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom21" elementType="N" x2="10.8094" y2="8.751"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom22" elementType="N" x2="8.3639" y2="4.9417"/> <atom id="S-ADENOSYLMETHIONINAMINE-atom23" elementType="C" x2="6.4583" y2="10.5959"/> <atom id="S-ADENOSYLMET…

unificationXref23322
type: unificationXref
DB: CapCyc
ID: S-ADENOSYLMETHIONINAMINE

unificationXref23321
type: unificationXref
DB: LIGAND
ID: C01137

phys-ent-participant25966
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25961
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25961
type: smallMolecule
MOLECULAR-WEIGHT: 145.247
NAME: spermidine
STRUCTURE: chemicalStructure25965
XREF: unificationXref25964
XREF: unificationXref25963
XREF: unificationXref25962

chemicalStructure25965
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SPERMIDINE-atom1" elementType="C" x2="-1.0" y2="-0.66007"/> <atom id="SPERMIDINE-atom2" elementType="C" x2="-0.48515" y2="0.17822"/> <atom id="SPERMIDINE-atom3" elementType="N" x2="0.0099" y2="-0.73597"/> <atom id="SPERMIDINE-atom4" elementType="C" x2="0.9967" y2="-0.12541"/> <atom id="SPERMIDINE-atom5" elementType="C" x2="0.9967" y2="-0.66007"/> <atom id="SPERMIDINE-atom6" elementType="N" x2="0.49505" y2="0.16832"/> <atom id="SPERMIDINE-atom7" elementType="C" x2="-1.0" y2="-0.12541"/> <atom id="SPERMIDINE-atom8" elementType="C" x2="0.0099" y2="-0.12541"/> <atom id="SPERMIDINE-atom9" elementType="N" x2="-0.51485" y2="-0.9802"/> <atom id="SPERMIDINE-atom10" elementType="C" x2="0.48185" y2="-1.0"/> <bond id="SPERMIDINE-bond1" atomRefs="SPERMIDINE-atom10 SPERMIDINE-atom3" order="1"/> <bond id="SPERMIDINE-bond2" atomRefs="SPERMIDINE-atom9 SPERMIDINE-atom1" order="1"/> <bond id="SPERMIDINE-bond3" atomRefs="SPERMIDINE-atom8 SPERMIDINE-atom3" order="1"/> <bond id="SPERMIDINE-bond4" atomRefs="SPERMIDINE-atom7 SPERMIDINE-atom2" order="1"/> <bond id="SPERMIDINE-bond5" atomRefs="SPERMIDINE-atom6 SPERMIDINE-atom4" order="1"/> <bond id="SPERMIDINE-bond6" atomRefs="SPERMIDINE-atom5 SPERMIDINE-atom10" order="1"/> <bond id="SPERMIDINE-bond7" atomRefs="SPERMIDINE-atom4 SPERMIDINE-atom5" order="1"/> <bond id="SPERMIDINE-bond8" atomRefs="SPERMIDINE-atom2 SPERMIDINE-atom8" order="1"/> <bond id="SPERMIDINE-bond9" atomRefs="SPERMIDINE-atom1 SPERMIDINE-atom7" order="1"/> <formula concise="C 7 H 19 N 3" formalCharge="0"/> 145.247 C(N)CCCNCCCN

unificationXref25964
type: unificationXref
DB: CapCyc
ID: SPERMIDINE

unificationXref25963
type: unificationXref
DB: CAS
ID: 124-20-9

unificationXref25962
type: unificationXref
DB: LIGAND
ID: C00315

phys-ent-participant25972
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25967
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25967
type: smallMolecule
MOLECULAR-WEIGHT: 297.331
NAME: 5'-methylthioadenosine
STRUCTURE: chemicalStructure25971
SYNONYMS: Methylthioadenosine
SYNONYMS: 5'-Deoxy-5'-(methylthio)adenosine
SYNONYMS: 5'-S-methyl-5'-thioadenosine
SYNONYMS: MTA
SYNONYMS: S-methyl-adenosine
XREF: unificationXref25970
XREF: unificationXref25969
XREF: unificationXref25968

chemicalStructure25971
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="5-METHYLTHIOADENOSINE-atom1" elementType="O" x2="4.6726" y2="4.5918"/> <atom id="5-METHYLTHIOADENOSINE-atom2" elementType="O" x2="3.043" y2="4.5947"/> <atom id="5-METHYLTHIOADENOSINE-atom3" elementType="O" x2="3.8365" y2="2.8321"/> <atom id="5-METHYLTHIOADENOSINE-atom4" elementType="S" x2="2.0627" y2="3.6426"/> <atom id="5-METHYLTHIOADENOSINE-atom5" elementType="C" x2="4.4574" y2="3.2781"/> <atom id="5-METHYLTHIOADENOSINE-atom6" elementType="C" x2="4.2316" y2="3.9832"/> <atom id="5-METHYLTHIOADENOSINE-atom7" elementType="C" x2="3.4742" y2="3.9832"/> <atom id="5-METHYLTHIOADENOSINE-atom8" elementType="C" x2="3.2291" y2="3.2671"/> <atom id="5-METHYLTHIOADENOSINE-atom9" elementType="C" x2="2.5169" y2="3.0404"/> <atom id="5-METHYLTHIOADENOSINE-atom10" elementType="N" x2="4.8949" y2="1.9417"/> <atom id="5-METHYLTHIOADENOSINE-atom11" elementType="C" x2="4.8949" y2="1.1916"/> <atom id="5-METHYLTHIOADENOSINE-atom12" elementType="N" x2="4.2454" y2="0.8125"/> <atom id="5-METHYLTHIOADENOSINE-atom13" elementType="C" x2="3.6" y2="1.1916"/> <atom id="5-METHYLTHIOADENOSINE-atom14" elementType="C" x2="2.9447" y2="0.8151"/> <atom id="5-METHYLTHIOADENOSINE-atom15" elementType="N" x2="2.2894" y2="1.1886"/> <atom id="5-METHYLTHIOADENOSINE-atom16" elementType="C" x2="2.2946" y2="1.9464"/> <atom id="5-METHYLTHIOADENOSINE-atom17" elementType="N" x2="2.9499" y2="2.323"/> <atom id="5-METHYLTHIOADENOSINE-atom18" elementType="C" x2="3.6" y2="1.9417"/> <atom id="5-METHYLTHIOADENOSINE-atom19" elementType="N" x2="2.946" y2="0.0651"/> <atom id="5-METHYLTHIOADENOSINE-atom20" elementType="C" x2="1.3333" y2="3.4458"/> <bond id="5-METHYLTHIOADENOSINE-bond1" atomRefs="5-METHYLTHIOADENOSINE-atom4 5-METHYLTHIOADENOSINE-atom20" order="1"/> <bond id="5-METHYLTHIOADENOSINE-bond2" atomRefs="5-METHYLTHIOADENOSINE-atom14 5-METHYLTHIOADENOSINE-atom19" order="1"/> <bond id="5-METHYLTHIOADENOSINE-bond3" atomRefs="5-METHYLTHIOADENOSINE-atom18 5-METHYLTHIOADENOSINE-atom17" order="A"/> <bond id="5-METHYLT…

unificationXref25970
type: unificationXref
DB: CapCyc
ID: 5-METHYLTHIOADENOSINE

unificationXref25969
type: unificationXref
DB: CAS
ID: 2457-80-9

unificationXref25968
type: unificationXref
DB: LIGAND
ID: C00170

unificationXref25960
type: unificationXref
DB: CapCyc
ID: SPERMIDINESYN-RXN

phys-ent-participant26007
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26005
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26005
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26006

unificationXref26006
type: unificationXref
DB: CapCyc
ID: SGNU196746-MONOMER

unificationXref26004
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-97

catalysis25998
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant26002
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25999

phys-ent-participant26002
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein26000
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein26000
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref26001

unificationXref26001
type: unificationXref
DB: CapCyc
ID: SGNU196858-MONOMER

unificationXref25999
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-115

catalysis25993
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant25997
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25994

phys-ent-participant25997
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25995
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25995
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref25996

unificationXref25996
type: unificationXref
DB: CapCyc
ID: SGNU197721-MONOMER

unificationXref25994
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-215

catalysis25988
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant25992
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25989

phys-ent-participant25992
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25990
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25990
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref25991

unificationXref25991
type: unificationXref
DB: CapCyc
ID: SGNU198380-MONOMER

unificationXref25989
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-290

catalysis25983
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant25987
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25984

phys-ent-participant25987
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25985
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25985
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref25986

unificationXref25986
type: unificationXref
DB: CapCyc
ID: SGNU198554-MONOMER

unificationXref25984
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-305

catalysis25978
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant25982
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25979

phys-ent-participant25982
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25980
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25980
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref25981

unificationXref25981
type: unificationXref
DB: CapCyc
ID: SGNU201567-MONOMER

unificationXref25979
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-505

catalysis25973
type: catalysis
CONTROLLED: biochemicalReaction25959
CONTROLLER: phys-ent-participant25977
NAME: SPERMIDINE SYNTHASE
XREF: unificationXref25974

phys-ent-participant25977
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25975
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25975
type: protein
NAME: SPERMIDINE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref25976

unificationXref25976
type: unificationXref
DB: CapCyc
ID: SGNU204112-MONOMER

unificationXref25974
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-666

catalysis25930
type: catalysis
CONTROLLED: biochemicalReaction25910
CONTROLLER: phys-ent-participant25868
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25931

biochemicalReaction25910
type: biochemicalReaction
EC-NUMBER: 2.6.1.1
LEFT: phys-ent-participant25917
LEFT: phys-ent-participant25706
NAME: 3-SULFINOALANINE-AMINOTRANSFERASE-RXN
RIGHT: phys-ent-participant25921
RIGHT: phys-ent-participant21095
XREF: unificationXref25911

phys-ent-participant25917
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25912
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25912
type: smallMolecule
MOLECULAR-WEIGHT: 153.153
NAME: 3-sulfinoalanine
STRUCTURE: chemicalStructure25916
SYNONYMS: 3-Sulfino-L-alanine
SYNONYMS: L-Cysteinesulfinic acid
SYNONYMS: 3-sulphino-L-alanine
XREF: unificationXref25915
XREF: unificationXref25914
XREF: unificationXref25913

chemicalStructure25916
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-SULFINOALANINE-atom1" elementType="N" x2="1.151" y2="0.1753"/> <atom id="3-SULFINOALANINE-atom2" elementType="C" x2="1.8407" y2="-0.0841"/> <atom id="3-SULFINOALANINE-atom3" elementType="C" x2="1.8268" y2="-0.8437"/> <atom id="3-SULFINOALANINE-atom4" elementType="O" x2="2.53" y2="-1.0998"/> <atom id="3-SULFINOALANINE-atom5" elementType="C" x2="2.4566" y2="0.3628"/> <atom id="3-SULFINOALANINE-atom6" elementType="O" x2="1.2085" y2="-1.2683"/> <atom id="3-SULFINOALANINE-atom7" elementType="S" x2="3.1416" y2="0.0572"/> <atom id="3-SULFINOALANINE-atom8" elementType="O" x2="3.7487" y2="0.4977"/> <atom id="3-SULFINOALANINE-atom9" elementType="O" x2="3.1236" y2="-0.7262"/> <bond id="3-SULFINOALANINE-bond1" atomRefs="3-SULFINOALANINE-atom7 3-SULFINOALANINE-atom9" order="2"/> <bond id="3-SULFINOALANINE-bond2" atomRefs="3-SULFINOALANINE-atom7 3-SULFINOALANINE-atom8" order="1"/> <bond id="3-SULFINOALANINE-bond3" atomRefs="3-SULFINOALANINE-atom5 3-SULFINOALANINE-atom7" order="1"/> <bond id="3-SULFINOALANINE-bond4" atomRefs="3-SULFINOALANINE-atom3 3-SULFINOALANINE-atom6" order="1"/> <bond id="3-SULFINOALANINE-bond5" atomRefs="3-SULFINOALANINE-atom2 3-SULFINOALANINE-atom5" order="1"/> <bond id="3-SULFINOALANINE-bond6" atomRefs="3-SULFINOALANINE-atom3 3-SULFINOALANINE-atom4" order="2"/> <bond id="3-SULFINOALANINE-bond7" atomRefs="3-SULFINOALANINE-atom2 3-SULFINOALANINE-atom3" order="1"/> <bond id="3-SULFINOALANINE-bond8" atomRefs="3-SULFINOALANINE-atom2 3-SULFINOALANINE-atom1" order="1"/> <formula concise="C 3 H 7 N 1 O 4 S 1" formalCharge="0"/> 153.153 C(=O)(O)C(N)CS(=O)O

unificationXref25915
type: unificationXref
DB: CapCyc
ID: 3-SULFINOALANINE

unificationXref25914
type: unificationXref
DB: CAS
ID: 1115-65-7

unificationXref25913
type: unificationXref
DB: LIGAND
ID: C00606

phys-ent-participant25921
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25918
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25918
type: smallMolecule
MOLECULAR-WEIGHT: 152.122
NAME: 3-sulfinyl-pyruvate
STRUCTURE: chemicalStructure25920
SYNONYMS: 3-sulphinyl-pyruvate
SYNONYMS: β-sulfinylpyruvate
XREF: unificationXref25919

chemicalStructure25920
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-SULFINYL-PYRUVATE-atom1" elementType="S" x2="0.62092" y2="-0.53268"/> <atom id="3-SULFINYL-PYRUVATE-atom2" elementType="O" x2="-0.59477" y2="-0.77778"/> <atom id="3-SULFINYL-PYRUVATE-atom3" elementType="O" x2="-0.18954" y2="-1.0"/> <atom id="3-SULFINYL-PYRUVATE-atom4" elementType="O" x2="0.62092" y2="-1.0"/> <atom id="3-SULFINYL-PYRUVATE-atom5" elementType="C" x2="0.21569" y2="-0.30065"/> <atom id="3-SULFINYL-PYRUVATE-atom6" elementType="O" x2="0.99673" y2="-0.25163"/> <atom id="3-SULFINYL-PYRUVATE-atom7" elementType="O" x2="-1.0" y2="-0.53922"/> <atom id="3-SULFINYL-PYRUVATE-atom8" elementType="C" x2="-0.18954" y2="-0.53268"/> <atom id="3-SULFINYL-PYRUVATE-atom9" elementType="C" x2="-0.59477" y2="-0.31046"/> <bond id="3-SULFINYL-PYRUVATE-bond1" atomRefs="3-SULFINYL-PYRUVATE-atom9 3-SULFINYL-PYRUVATE-atom8" order="1"/> <bond id="3-SULFINYL-PYRUVATE-bond2" atomRefs="3-SULFINYL-PYRUVATE-atom7 3-SULFINYL-PYRUVATE-atom9" order="1"/> <bond id="3-SULFINYL-PYRUVATE-bond3" atomRefs="3-SULFINYL-PYRUVATE-atom5 3-SULFINYL-PYRUVATE-atom8" order="1"/> <bond id="3-SULFINYL-PYRUVATE-bond4" atomRefs="3-SULFINYL-PYRUVATE-atom4 3-SULFINYL-PYRUVATE-atom1" order="2"/> <bond id="3-SULFINYL-PYRUVATE-bond5" atomRefs="3-SULFINYL-PYRUVATE-atom3 3-SULFINYL-PYRUVATE-atom8" order="2"/> <bond id="3-SULFINYL-PYRUVATE-bond6" atomRefs="3-SULFINYL-PYRUVATE-atom2 3-SULFINYL-PYRUVATE-atom9" order="2"/> <bond id="3-SULFINYL-PYRUVATE-bond7" atomRefs="3-SULFINYL-PYRUVATE-atom1 3-SULFINYL-PYRUVATE-atom5" order="1"/> <bond id="3-SULFINYL-PYRUVATE-bond8" atomRefs="3-SULFINYL-PYRUVATE-atom1 3-SULFINYL-PYRUVATE-atom6" order="1"/> <formula concise="C 3 H 4 O 5 S 1" formalCharge="0"/> 152.122 C(S(=O)O)C(=O)C(O)=O

unificationXref25919
type: unificationXref
DB: CapCyc
ID: 3-SULFINYL-PYRUVATE

unificationXref25911
type: unificationXref
DB: CapCyc
ID: 3-SULFINOALANINE-AMINOTRANSFERASE-RXN

phys-ent-participant25868
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25866
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25866
type: protein
NAME: ASPARTATE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25867

unificationXref25867
type: unificationXref
DB: CapCyc
ID: SGNU197171-MONOMER

unificationXref25931
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-149

catalysis25928
type: catalysis
CONTROLLED: biochemicalReaction25910
CONTROLLER: phys-ent-participant25863
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25929

phys-ent-participant25863
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25861
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25861
type: protein
NAME: ASPARTATE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25862

unificationXref25862
type: unificationXref
DB: CapCyc
ID: SGNU197549-MONOMER

unificationXref25929
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-194

catalysis25926
type: catalysis
CONTROLLED: biochemicalReaction25910
CONTROLLER: phys-ent-participant25858
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25927

phys-ent-participant25858
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25856
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25856
type: protein
NAME: ASPARTATE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25857

unificationXref25857
type: unificationXref
DB: CapCyc
ID: SGNU197860-MONOMER

unificationXref25927
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-232

catalysis25924
type: catalysis
CONTROLLED: biochemicalReaction25910
CONTROLLER: phys-ent-participant25853
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25925

phys-ent-participant25853
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25851
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25851
type: protein
NAME: ASPARTATE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25852

unificationXref25852
type: unificationXref
DB: CapCyc
ID: SGNU198110-MONOMER

unificationXref25925
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-262

catalysis25922
type: catalysis
CONTROLLED: biochemicalReaction25910
CONTROLLER: phys-ent-participant25848
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25923

phys-ent-participant25848
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25846
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25846
type: protein
NAME: ASPARTATE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25847

unificationXref25847
type: unificationXref
DB: CapCyc
ID: SGNU199255-MONOMER

unificationXref25923
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-757

catalysis25899
type: catalysis
CONTROLLED: biochemicalReaction25886
CONTROLLER: phys-ent-participant25903
NAME: ACETYLORNITHINE TRANSAMINASE
XREF: unificationXref25900

biochemicalReaction25886
type: biochemicalReaction
EC-NUMBER: 2.6.1.11
LEFT: phys-ent-participant25893
LEFT: phys-ent-participant25706
NAME: Acetylornithine aminotransferase
RIGHT: phys-ent-participant25898
RIGHT: phys-ent-participant21095
XREF: unificationXref25887

phys-ent-participant25893
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25888
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25888
type: smallMolecule
MOLECULAR-WEIGHT: 174.199
NAME: N-acetyl-L-ornithine
STRUCTURE: chemicalStructure25892
SYNONYMS: N2-acetyl-ornithine
SYNONYMS: N-α-acetylornithine
SYNONYMS: N-acetylornithine
SYNONYMS: acetylornithine
SYNONYMS: N2-acetyl-L-ornithine
XREF: unificationXref25891
XREF: unificationXref25890
XREF: unificationXref25889

chemicalStructure25892
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="N-ALPHA-ACETYLORNITHINE-atom1" elementType="C" x2="2.4657" y2="-6.2328"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom2" elementType="N" x2="7.4224" y2="-2.0694"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom3" elementType="O" x2="3.8288" y2="-4.8452"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom4" elementType="O" x2="1.2145" y2="0.0"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom5" elementType="O" x2="0.0" y2="-2.0694"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom6" elementType="C" x2="6.2079" y2="-1.3881"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom7" elementType="C" x2="4.9563" y2="-2.0817"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom8" elementType="C" x2="3.7051" y2="-1.3881"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom9" elementType="N" x2="2.4657" y2="-3.6058"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom10" elementType="C" x2="2.4657" y2="-4.8452"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom11" elementType="C" x2="1.2145" y2="-1.3881"/> <atom id="N-ALPHA-ACETYLORNITHINE-atom12" elementType="C" x2="2.4657" y2="-2.0817"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond1" atomRefs="N-ALPHA-ACETYLORNITHINE-atom11 N-ALPHA-ACETYLORNITHINE-atom12" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond2" atomRefs="N-ALPHA-ACETYLORNITHINE-atom9 N-ALPHA-ACETYLORNITHINE-atom12" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond3" atomRefs="N-ALPHA-ACETYLORNITHINE-atom9 N-ALPHA-ACETYLORNITHINE-atom10" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond4" atomRefs="N-ALPHA-ACETYLORNITHINE-atom12 N-ALPHA-ACETYLORNITHINE-atom8" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond5" atomRefs="N-ALPHA-ACETYLORNITHINE-atom7 N-ALPHA-ACETYLORNITHINE-atom8" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond6" atomRefs="N-ALPHA-ACETYLORNITHINE-atom6 N-ALPHA-ACETYLORNITHINE-atom7" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond7" atomRefs="N-ALPHA-ACETYLORNITHINE-atom5 N-ALPHA-ACETYLORNITHINE-atom11" order="1"/> <bond id="N-ALPHA-ACETYLORNITHINE-bond8" atomRefs="N-ALPHA-ACETYLORNITHINE-atom4 N-ALPHA-ACETYLORNITHINE-atom11" order="2"…

unificationXref25891
type: unificationXref
DB: CapCyc
ID: N-ALPHA-ACETYLORNITHINE

unificationXref25890
type: unificationXref
DB: CAS
ID: 2185-16-2

unificationXref25889
type: unificationXref
DB: LIGAND
ID: C00437

phys-ent-participant25898
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25894
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25894
type: smallMolecule
MOLECULAR-WEIGHT: 173.168
NAME: N-acetylglutamate semialdehyde
STRUCTURE: chemicalStructure25897
SYNONYMS: N-acetyl-L-glutamate semialdehyde
SYNONYMS: N-acetyl-L-glutamate-5-semialdehyde
SYNONYMS: N-acetylglutamate γ-semialdehyde
XREF: unificationXref25896
XREF: unificationXref25895

chemicalStructure25897
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom1" elementType="O" x2="-1.0" y2="0.07667"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom2" elementType="C" x2="0.99674" y2="0.31485"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom3" elementType="C" x2="-0.57586" y2="0.31485"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom4" elementType="O" x2="0.28874" y2="-0.61827"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom5" elementType="C" x2="-0.18108" y2="0.09299"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom6" elementType="N" x2="-0.55954" y2="-0.28548"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom7" elementType="C" x2="-0.49755" y2="-1.0"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom8" elementType="O" x2="0.99674" y2="0.80098"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom9" elementType="C" x2="-0.19739" y2="-0.61827"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom10" elementType="C" x2="0.60196" y2="0.09299"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom11" elementType="C" x2="0.21044" y2="0.31485"/> <atom id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom12" elementType="O" x2="-0.57586" y2="0.80098"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond1" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom12 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom3" order="2"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond2" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom11 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom5" order="1"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond3" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom10 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom11" order="1"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond4" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom9 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom6" order="1"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond5" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom8 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom2" order="2"/> <bond id="N-ACETYLGLUTAMATE_SEMIALDEHYDE-bond6" atomRefs="N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom7 N-ACETYLGLUTAMATE_SEMIALDEHYDE-atom9" order="1"/> <bond id="N-ACET…

unificationXref25896
type: unificationXref
DB: CapCyc
ID: N-ACETYLGLUTAMATE_SEMIALDEHYDE

unificationXref25895
type: unificationXref
DB: LIGAND
ID: C01250

unificationXref25887
type: unificationXref
DB: CapCyc
ID: ACETYLORNTRANSAM-RXN

phys-ent-participant25903
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25901
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25901
type: protein
NAME: ACETYLORNITHINE TRANSAMINASE
ORGANISM: bioSource20982
XREF: unificationXref25902

unificationXref25902
type: unificationXref
DB: CapCyc
ID: SGNU198920-MONOMER

unificationXref25900
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-336

catalysis25881
type: catalysis
CONTROLLED: biochemicalReaction25869
CONTROLLER: phys-ent-participant25885
NAME: ALANINE AMINOTRANSFERASE
XREF: unificationXref25882

biochemicalReaction25869
type: biochemicalReaction
EC-NUMBER: 2.6.1.2
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant23613
NAME: Alanine aminotransferase
RIGHT: phys-ent-participant21095
RIGHT: phys-ent-participant21010
SYNONYMS: Glutamic--alanine transaminase
SYNONYMS: Glutamic--pyruvic transaminase
XREF: unificationXref25870

unificationXref25870
type: unificationXref
DB: CapCyc
ID: ALANINE-AMINOTRANSFERASE-RXN

phys-ent-participant25885
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25883
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25883
type: protein
NAME: ALANINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25884

unificationXref25884
type: unificationXref
DB: CapCyc
ID: SGNU200153-MONOMER

unificationXref25882
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-404

catalysis25876
type: catalysis
CONTROLLED: biochemicalReaction25869
CONTROLLER: phys-ent-participant25880
NAME: ALANINE AMINOTRANSFERASE
XREF: unificationXref25877

phys-ent-participant25880
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25878
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25878
type: protein
NAME: ALANINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25879

unificationXref25879
type: unificationXref
DB: CapCyc
ID: SGNU202535-MONOMER

unificationXref25877
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-571

catalysis25871
type: catalysis
CONTROLLED: biochemicalReaction25869
CONTROLLER: phys-ent-participant25875
NAME: ALANINE AMINOTRANSFERASE
XREF: unificationXref25872

phys-ent-participant25875
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25873
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25873
type: protein
NAME: ALANINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25874

unificationXref25874
type: unificationXref
DB: CapCyc
ID: SGNU205548-MONOMER

unificationXref25872
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-724

catalysis25864
type: catalysis
CONTROLLED: biochemicalReaction25842
CONTROLLER: phys-ent-participant25868
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25865

biochemicalReaction25842
type: biochemicalReaction
EC-NUMBER: 2.6.1.1
LEFT: phys-ent-participant21246
LEFT: phys-ent-participant25706
NAME: Aspartate aminotransferase
RIGHT: phys-ent-participant21016
RIGHT: phys-ent-participant21095
SYNONYMS: Glutamic--aspartic transaminase
SYNONYMS: Glutamic--oxaloacetic transaminase
SYNONYMS: Transaminase A
XREF: unificationXref25843

unificationXref25843
type: unificationXref
DB: CapCyc
ID: ASPAMINOTRANS-RXN

unificationXref25865
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-150

catalysis25859
type: catalysis
CONTROLLED: biochemicalReaction25842
CONTROLLER: phys-ent-participant25863
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25860

unificationXref25860
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-195

catalysis25854
type: catalysis
CONTROLLED: biochemicalReaction25842
CONTROLLER: phys-ent-participant25858
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25855

unificationXref25855
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-233

catalysis25849
type: catalysis
CONTROLLED: biochemicalReaction25842
CONTROLLER: phys-ent-participant25853
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25850

unificationXref25850
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-263

catalysis25844
type: catalysis
CONTROLLED: biochemicalReaction25842
CONTROLLER: phys-ent-participant25848
NAME: ASPARTATE AMINOTRANSFERASE
XREF: unificationXref25845

unificationXref25845
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-758

catalysis25784
type: catalysis
CONTROLLED: biochemicalReaction25782
CONTROLLER: phys-ent-participant25788
NAME: glyoxylate aminotransferase
XREF: unificationXref25785

biochemicalReaction25782
type: biochemicalReaction
EC-NUMBER: 2.6.1.4
LEFT: phys-ent-participant25706
LEFT: phys-ent-participant21192
NAME: Glycine aminotransferase
RIGHT: phys-ent-participant21095
RIGHT: phys-ent-participant23094
XREF: unificationXref25783

unificationXref25783
type: unificationXref
DB: CapCyc
ID: GLYCINE-AMINOTRANSFERASE-RXN

phys-ent-participant25788
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25786
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25786
type: protein
NAME: glyoxylate aminotransferase
ORGANISM: bioSource20982
XREF: unificationXref25787

unificationXref25787
type: unificationXref
DB: CapCyc
ID: SGNU200157-MONOMER

unificationXref25785
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-406

catalysis25722
type: catalysis
CONTROLLED: biochemicalReaction25693
CONTROLLER: phys-ent-participant25726
NAME: TYROSINE AMINOTRANSFERASE
XREF: unificationXref25723

biochemicalReaction25693
type: biochemicalReaction
EC-NUMBER: 2.6.1.5
LEFT: phys-ent-participant25700
LEFT: phys-ent-participant25706
NAME: Tyrosine aminotransferase
RIGHT: phys-ent-participant21095
RIGHT: phys-ent-participant25711
SYNONYMS: Tyrosine transaminase
XREF: unificationXref25694

phys-ent-participant25700
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25695
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25695
type: smallMolecule
MOLECULAR-WEIGHT: 181.191
NAME: L-tyrosine
STRUCTURE: chemicalStructure25699
SYNONYMS: Y
SYNONYMS: tyr
SYNONYMS: tyrosine
XREF: unificationXref25698
XREF: unificationXref25697
XREF: unificationXref25696

chemicalStructure25699
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TYR-atom1" elementType="C" x2="-0.3047" y2="-2.0433"/> <atom id="TYR-atom2" elementType="O" x2="1.9164" y2="-0.2538"/> <atom id="TYR-atom3" elementType="C" x2="-1.7261" y2="-1.2311"/> <atom id="TYR-atom4" elementType="N" x2="1.1169" y2="-1.7641"/> <atom id="TYR-atom5" elementType="C" x2="1.1169" y2="-1.2183"/> <atom id="TYR-atom6" elementType="C" x2="0.4061" y2="-0.7995"/> <atom id="TYR-atom7" elementType="C" x2="-0.3047" y2="-1.2183"/> <atom id="TYR-atom8" elementType="C" x2="-1.7261" y2="-2.0306"/> <atom id="TYR-atom9" elementType="C" x2="-1.0153" y2="-0.8122"/> <atom id="TYR-atom10" elementType="C" x2="-1.0153" y2="-2.4494"/> <atom id="TYR-atom11" elementType="O" x2="2.4367" y2="-1.2183"/> <atom id="TYR-atom12" elementType="O" x2="-2.4494" y2="-2.4114"/> <atom id="TYR-atom13" elementType="C" x2="1.9164" y2="-0.736"/> <bond id="TYR-bond1" atomRefs="TYR-atom1 TYR-atom10" order="A"/> <bond id="TYR-bond2" atomRefs="TYR-atom3 TYR-atom9" order="A"/> <bond id="TYR-bond3" atomRefs="TYR-atom5 TYR-atom13" order="1"/> <bond id="TYR-bond4" atomRefs="TYR-atom5 TYR-atom4" order="1"/> <bond id="TYR-bond5" atomRefs="TYR-atom6 TYR-atom5" order="1"/> <bond id="TYR-bond6" atomRefs="TYR-atom7 TYR-atom6" order="1"/> <bond id="TYR-bond7" atomRefs="TYR-atom7 TYR-atom1" order="A"/> <bond id="TYR-bond8" atomRefs="TYR-atom8 TYR-atom3" order="A"/> <bond id="TYR-bond9" atomRefs="TYR-atom9 TYR-atom7" order="A"/> <bond id="TYR-bond10" atomRefs="TYR-atom10 TYR-atom8" order="A"/> <bond id="TYR-bond11" atomRefs="TYR-atom12 TYR-atom8" order="1"/> <bond id="TYR-bond12" atomRefs="TYR-atom13 TYR-atom2" order="2"/> <bond id="TYR-bond13" atomRefs="TYR-atom13 TYR-atom11" order="1"/> <formula concise="C 9 H 11 N 1 O 3" formalCharge="0"/> 181.191 C(O)(=O)C(N)Cc1(ccc(O)cc1)

unificationXref25698
type: unificationXref
DB: CapCyc
ID: TYR

unificationXref25697
type: unificationXref
DB: CAS
ID: 60-18-4

unificationXref25696
type: unificationXref
DB: LIGAND
ID: C00082

phys-ent-participant25711
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25707
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25707
type: smallMolecule
MOLECULAR-WEIGHT: 180.16
NAME: p-hydroxyphenylpyruvate
STRUCTURE: chemicalStructure25710
SYNONYMS: hydroxyphenylpyruvate
SYNONYMS: 4-hydroxyphenylpyruvate
XREF: unificationXref25709
XREF: unificationXref25708

chemicalStructure25710
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="P-HYDROXY-PHENYLPYRUVATE-atom1" elementType="C" x2="-0.70481" y2="-0.75788"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom2" elementType="C" x2="-0.28358" y2="-0.51575"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom3" elementType="O" x2="-1.0" y2="-0.75788"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom4" elementType="C" x2="0.72471" y2="-0.54229"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom5" elementType="C" x2="-0.14096" y2="-0.75788"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom6" elementType="O" x2="0.72471" y2="-0.2471"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom7" elementType="C" x2="0.41294" y2="-0.69818"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom8" elementType="C" x2="-0.28358" y2="-1.0"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom9" elementType="O" x2="0.99668" y2="-0.66169"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom10" elementType="C" x2="0.08126" y2="-0.56551"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom11" elementType="C" x2="-0.56219" y2="-1.0"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom12" elementType="C" x2="-0.56219" y2="-0.51575"/> <atom id="P-HYDROXY-PHENYLPYRUVATE-atom13" elementType="O" x2="0.41294" y2="-0.40299"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond1" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom13 P-HYDROXY-PHENYLPYRUVATE-atom7" order="2"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond2" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom12 P-HYDROXY-PHENYLPYRUVATE-atom2" order="A"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond3" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom8 P-HYDROXY-PHENYLPYRUVATE-atom11" order="A"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond4" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom10 P-HYDROXY-PHENYLPYRUVATE-atom7" order="1"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond5" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom9 P-HYDROXY-PHENYLPYRUVATE-atom4" order="1"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond6" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom5 P-HYDROXY-PHENYLPYRUVATE-atom8" order="A"/> <bond id="P-HYDROXY-PHENYLPYRUVATE-bond7" atomRefs="P-HYDROXY-PHENYLPYRUVATE-atom7 P-HYDROXY-PHENYLPYRUVA…

unificationXref25709
type: unificationXref
DB: CapCyc
ID: P-HYDROXY-PHENYLPYRUVATE

unificationXref25708
type: unificationXref
DB: CAS
ID: 156-39-8

unificationXref25694
type: unificationXref
DB: CapCyc
ID: TYROSINE-AMINOTRANSFERASE-RXN

phys-ent-participant25726
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25724
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25724
type: protein
NAME: TYROSINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25725

unificationXref25725
type: unificationXref
DB: CapCyc
ID: SGNU198322-MONOMER

unificationXref25723
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-285

catalysis25717
type: catalysis
CONTROLLED: biochemicalReaction25693
CONTROLLER: phys-ent-participant25721
NAME: TYROSINE AMINOTRANSFERASE
XREF: unificationXref25718

phys-ent-participant25721
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25719
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25719
type: protein
NAME: TYROSINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25720

unificationXref25720
type: unificationXref
DB: CapCyc
ID: SGNU200727-MONOMER

unificationXref25718
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-441

catalysis25712
type: catalysis
CONTROLLED: biochemicalReaction25693
CONTROLLER: phys-ent-participant25716
NAME: TYROSINE AMINOTRANSFERASE
XREF: unificationXref25713

phys-ent-participant25716
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25714
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25714
type: protein
NAME: TYROSINE AMINOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25715

unificationXref25715
type: unificationXref
DB: CapCyc
ID: SGNU204956-MONOMER

unificationXref25713
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-709

catalysis25686
type: catalysis
CONTROLLED: biochemicalReaction25679
CONTROLLER: phys-ent-participant25690
NAME: PYROPHOSPHATE-FRUCTOSE-6-PHOSPHATE 1-PHOSPHOTRANSFERASE
XREF: unificationXref25687

biochemicalReaction25679
type: biochemicalReaction
EC-NUMBER: 2.7.1.90
LEFT: phys-ent-participant22081
LEFT: phys-ent-participant21108
NAME: Diphosphate--fructose-6-phosphate 1-phosphotransferase
RIGHT: phys-ent-participant20970
RIGHT: phys-ent-participant23213
SYNONYMS: Diphosphate-dependent 6-phosphofructose-1-kinase
SYNONYMS: Pyrophosphate-dependent 6-phosphofructose-1-kinase
SYNONYMS: 6-phosphofructokinase (diphosphate)
SYNONYMS: 6-phosphofructokinase (pyrophosphate)
SYNONYMS: Pyrophosphate--fructose-6-phosphate 1-phosphotransferase
XREF: unificationXref25680

phys-ent-participant23213
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23208
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23208
type: smallMolecule
MOLECULAR-WEIGHT: 340.117
NAME: fructose-1,6-bisphosphate
STRUCTURE: chemicalStructure23212
SYNONYMS: fructose-1,6-biphosphate
SYNONYMS: fructose-1,6-diphosphate
SYNONYMS: α-D-fructose-1,6-diphosphate
SYNONYMS: D-fructose-1,6-diphosphate
SYNONYMS: D-fructose-1,6-bisphosphate
XREF: unificationXref23211
XREF: unificationXref23210
XREF: unificationXref23209

chemicalStructure23212
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FRUCTOSE-16-DIPHOSPHATE-atom1" elementType="O" x2="1.4089" y2="-2.9043"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom2" elementType="O" x2="10.2533" y2="-4.9856"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom3" elementType="O" x2="4.0316" y2="0.0"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom4" elementType="O" x2="7.0774" y2="0.0"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom5" elementType="O" x2="8.0186" y2="-2.8967"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom6" elementType="O" x2="1.438" y2="-5.7038"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom7" elementType="O" x2="0.0" y2="-4.2847"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom8" elementType="O" x2="7.5903" y2="-5.8508"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom9" elementType="O" x2="9.287" y2="-6.7697"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom10" elementType="C" x2="3.0904" y2="-2.8967"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom11" elementType="C" x2="7.1198" y2="-3.7956"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom12" elementType="O" x2="2.7993" y2="-4.2661"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom13" elementType="O" x2="8.4892" y2="-4.0867"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom14" elementType="O" x2="5.5545" y2="-3.287"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom15" elementType="C" x2="4.8545" y2="-1.1326"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom16" elementType="C" x2="4.4219" y2="-2.4641"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom17" elementType="C" x2="6.2545" y2="-1.1326"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom18" elementType="C" x2="6.6871" y2="-2.4641"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom19" elementType="P" x2="1.3999" y2="-4.3043"/> <atom id="FRUCTOSE-16-DIPHOSPHATE-atom20" elementType="P" x2="8.9218" y2="-5.4182"/> <bond id="FRUCTOSE-16-DIPHOSPHATE-bond1" atomRefs="FRUCTOSE-16-DIPHOSPHATE-atom17 FRUCTOSE-16-DIPHOSPHATE-atom18" order="1"/> <bond id="FRUCTOSE-16-DIPHOSPHATE-bond2" atomRefs="FRUCTOSE-16-DIPHOSPHATE-atom15 FRUCTOSE-16-DIPHOSPHATE-atom17" order="1"/> <bond id="FRUCTOSE-16-DIPHOSPHATE-bond3" atomRefs="FRUCTOSE-16-DIPHOSP…

unificationXref23211
type: unificationXref
DB: CapCyc
ID: FRUCTOSE-16-DIPHOSPHATE

unificationXref23210
type: unificationXref
DB: CAS
ID: 488-69-7

unificationXref23209
type: unificationXref
DB: LIGAND
ID: C00354

unificationXref25680
type: unificationXref
DB: CapCyc
ID: 2.7.1.90-RXN

phys-ent-participant25690
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25688
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25688
type: protein
NAME: PYROPHOSPHATE-FRUCTOSE-6-PHOSPHATE 1-PHOSPHOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25689

unificationXref25689
type: unificationXref
DB: CapCyc
ID: SGNU202012-MONOMER

unificationXref25687
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-539

catalysis25681
type: catalysis
CONTROLLED: biochemicalReaction25679
CONTROLLER: phys-ent-participant25685
NAME: PYROPHOSPHATE--FRUCTOSE-6-PHOSPHATE 1-PHOSPHOTRANSFERASE
XREF: unificationXref25682

phys-ent-participant25685
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25683
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25683
type: protein
NAME: PYROPHOSPHATE--FRUCTOSE-6-PHOSPHATE 1-PHOSPHOTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25684

unificationXref25684
type: unificationXref
DB: CapCyc
ID: SGNU202777-MONOMER

unificationXref25682
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-582

catalysis25664
type: catalysis
CONTROLLED: biochemicalReaction25657
CONTROLLER: phys-ent-participant25668
NAME: FRUCTOKINASE
XREF: unificationXref25665

biochemicalReaction25657
type: biochemicalReaction
EC-NUMBER: 2.7.1.4
LEFT: phys-ent-participant22163
LEFT: phys-ent-participant20931
NAME: Fructokinase
RIGHT: phys-ent-participant22081
RIGHT: phys-ent-participant20977
SYNONYMS: D-fructokinase
XREF: unificationXref25658

phys-ent-participant22163
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22157
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22157
type: smallMolecule
MOLECULAR-WEIGHT: 180.157
NAME: fructose
STRUCTURE: chemicalStructure22162
SYNONYMS: laevosan
SYNONYMS: levugen
SYNONYMS: laevoral
SYNONYMS: fructosteril
SYNONYMS: levulose
SYNONYMS: fru
SYNONYMS: fru-ring
SYNONYMS: D-fructose-ring
SYNONYMS: D-fructose
XREF: unificationXref22161
XREF: unificationXref22160
XREF: unificationXref22159
XREF: unificationXref22158

chemicalStructure22162
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FRU-atom1" elementType="O" x2="0.0" y2="-4.2661"/> <atom id="FRU-atom2" elementType="O" x2="5.6898" y2="-4.0867"/> <atom id="FRU-atom3" elementType="O" x2="1.2323" y2="0.0"/> <atom id="FRU-atom4" elementType="O" x2="4.2781" y2="0.0"/> <atom id="FRU-atom5" elementType="O" x2="5.2193" y2="-2.8967"/> <atom id="FRU-atom6" elementType="C" x2="0.2911" y2="-2.8967"/> <atom id="FRU-atom7" elementType="C" x2="4.3204" y2="-3.7956"/> <atom id="FRU-atom8" elementType="O" x2="2.7552" y2="-3.287"/> <atom id="FRU-atom9" elementType="C" x2="2.0552" y2="-1.1326"/> <atom id="FRU-atom10" elementType="C" x2="1.6226" y2="-2.4641"/> <atom id="FRU-atom11" elementType="C" x2="3.4552" y2="-1.1326"/> <atom id="FRU-atom12" elementType="C" x2="3.8878" y2="-2.4641"/> <bond id="FRU-bond1" atomRefs="FRU-atom11 FRU-atom12" order="1"/> <bond id="FRU-bond2" atomRefs="FRU-atom9 FRU-atom11" order="1"/> <bond id="FRU-bond3" atomRefs="FRU-atom9 FRU-atom10" order="1"/> <bond id="FRU-bond4" atomRefs="FRU-atom8 FRU-atom12" order="1"/> <bond id="FRU-bond5" atomRefs="FRU-atom8 FRU-atom10" order="1"/> <bond id="FRU-bond6" atomRefs="FRU-atom7 FRU-atom12" order="1"/> <bond id="FRU-bond7" atomRefs="FRU-atom10 FRU-atom6" order="1"/> <bond id="FRU-bond8" atomRefs="FRU-atom5 FRU-atom12" order="1"/> <bond id="FRU-bond9" atomRefs="FRU-atom11 FRU-atom4" order="1"/> <bond id="FRU-bond10" atomRefs="FRU-atom9 FRU-atom3" order="1"/> <bond id="FRU-bond11" atomRefs="FRU-atom2 FRU-atom7" order="1"/> <bond id="FRU-bond12" atomRefs="FRU-atom1 FRU-atom6" order="1"/> <formula concise="C 6 H 12 O 6" formalCharge="0"/> 180.157 C(O)C1(C(O)C(O)C(O)(O1)CO)

unificationXref22161
type: unificationXref
DB: CapCyc
ID: FRU

unificationXref22160
type: unificationXref
DB: CAS
ID: 30237-26-4

unificationXref22159
type: unificationXref
DB: LIGAND
ID: C00095

unificationXref22158
type: unificationXref
DB: CAS
ID: 57-48-7

phys-ent-participant20931
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20926
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20926
type: smallMolecule
MOLECULAR-WEIGHT: 507.183
NAME: ATP
STRUCTURE: chemicalStructure20930
SYNONYMS: adenylpyrophosphate
SYNONYMS: adenosine-triphosphate
SYNONYMS: adenosine-5'-triphosphate
XREF: unificationXref20929
XREF: unificationXref20928
XREF: unificationXref20927

chemicalStructure20930
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ATP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="ATP-atom2" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="ATP-atom3" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="ATP-atom4" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="ATP-atom5" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="ATP-atom6" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="ATP-atom7" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="ATP-atom8" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="ATP-atom9" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="ATP-atom10" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="ATP-atom11" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="ATP-atom12" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="ATP-atom13" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="ATP-atom14" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="ATP-atom15" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="ATP-atom16" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="ATP-atom17" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="ATP-atom18" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="ATP-atom19" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="ATP-atom20" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="ATP-atom21" elementType="N" x2="7.9852" y2="-6.4411"/> <atom id="ATP-atom22" elementType="O" x2="9.0842" y2="-1.3204"/> <atom id="ATP-atom23" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="ATP-atom24" elementType="O" x2="3.6666" y2="-3.3112"/> <atom id="ATP-atom25" elementType="O" x2="3.6641" y2="-1.6612"/> <atom id="ATP-atom26" elementType="P" x2="3.6657" y2="-2.4862"/> <atom id="ATP-atom27" elementType="O" x2="2.8407" y2="-2.4862"/> <atom id="ATP-atom28" elementType="O" x2="2.0157" y2="-3.313"/> <atom id="ATP-atom29" elementType="O" x2="2.0132" y2="-1.663"/> <atom id="ATP-atom30" elementType="O" x2="1.1898" y2="-2.488"/> <atom id="ATP-atom31" elementType="P" x2="2.0148" y2="-2.488"/>…

unificationXref20929
type: unificationXref
DB: CapCyc
ID: ATP

unificationXref20928
type: unificationXref
DB: CAS
ID: 56-65-5

unificationXref20927
type: unificationXref
DB: LIGAND
ID: C00002

unificationXref25658
type: unificationXref
DB: CapCyc
ID: FRUCTOKINASE-RXN

phys-ent-participant25668
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25666
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25666
type: protein
NAME: FRUCTOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25667

unificationXref25667
type: unificationXref
DB: CapCyc
ID: SGNU196308-MONOMER

unificationXref25665
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-36

catalysis25659
type: catalysis
CONTROLLED: biochemicalReaction25657
CONTROLLER: phys-ent-participant25663
NAME: FRUCTOKINASE
XREF: unificationXref25660

phys-ent-participant25663
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25661
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25661
type: protein
NAME: FRUCTOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25662

unificationXref25662
type: unificationXref
DB: CapCyc
ID: SGNU203658-MONOMER

unificationXref25660
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-629

catalysis25649
type: catalysis
CONTROLLED: biochemicalReaction25647
CONTROLLER: phys-ent-participant25653
NAME: GALACTOKINASE
XREF: unificationXref25650

biochemicalReaction25647
type: biochemicalReaction
EC-NUMBER: 2.7.1.6
LEFT: phys-ent-participant22270
LEFT: phys-ent-participant20931
NAME: Galactokinase
RIGHT: phys-ent-participant24966
RIGHT: phys-ent-participant20977
XREF: unificationXref25648

phys-ent-participant22270
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22267
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22267
type: smallMolecule
MOLECULAR-WEIGHT: 180.157
NAME: alpha-D-galactose
STRUCTURE: chemicalStructure22269
SYNONYMS: α-galactose
SYNONYMS: 6-(hydroxymethyl)tetrahydropyran-2,3,4,5-tetraol
XREF: unificationXref22268

chemicalStructure22269
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ALPHA-D-GALACTOSE-atom1" elementType="O" x2="0.0" y2="-5.6"/> <atom id="ALPHA-D-GALACTOSE-atom2" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="ALPHA-D-GALACTOSE-atom3" elementType="O" x2="4.8497" y2="-1.4"/> <atom id="ALPHA-D-GALACTOSE-atom4" elementType="O" x2="2.4249" y2="0.0"/> <atom id="ALPHA-D-GALACTOSE-atom5" elementType="O" x2="0.0" y2="-1.4"/> <atom id="ALPHA-D-GALACTOSE-atom6" elementType="C" x2="0.0" y2="-4.2"/> <atom id="ALPHA-D-GALACTOSE-atom7" elementType="O" x2="2.4249" y2="-4.2"/> <atom id="ALPHA-D-GALACTOSE-atom8" elementType="C" x2="3.6373" y2="-3.5"/> <atom id="ALPHA-D-GALACTOSE-atom9" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="ALPHA-D-GALACTOSE-atom10" elementType="C" x2="2.4249" y2="-1.4"/> <atom id="ALPHA-D-GALACTOSE-atom11" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="ALPHA-D-GALACTOSE-atom12" elementType="C" x2="1.2124" y2="-3.5"/> <bond id="ALPHA-D-GALACTOSE-bond1" atomRefs="ALPHA-D-GALACTOSE-atom11 ALPHA-D-GALACTOSE-atom12" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond2" atomRefs="ALPHA-D-GALACTOSE-atom10 ALPHA-D-GALACTOSE-atom11" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond3" atomRefs="ALPHA-D-GALACTOSE-atom9 ALPHA-D-GALACTOSE-atom10" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond4" atomRefs="ALPHA-D-GALACTOSE-atom8 ALPHA-D-GALACTOSE-atom9" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond5" atomRefs="ALPHA-D-GALACTOSE-atom7 ALPHA-D-GALACTOSE-atom12" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond6" atomRefs="ALPHA-D-GALACTOSE-atom7 ALPHA-D-GALACTOSE-atom8" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond7" atomRefs="ALPHA-D-GALACTOSE-atom12 ALPHA-D-GALACTOSE-atom6" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond8" atomRefs="ALPHA-D-GALACTOSE-atom11 ALPHA-D-GALACTOSE-atom5" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond9" atomRefs="ALPHA-D-GALACTOSE-atom10 ALPHA-D-GALACTOSE-atom4" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond10" atomRefs="ALPHA-D-GALACTOSE-atom9 ALPHA-D-GALACTOSE-atom3" order="1"/> <bond id="ALPHA-D-GALACTOSE-bond11" a…

unificationXref22268
type: unificationXref
DB: CapCyc
ID: ALPHA-D-GALACTOSE

phys-ent-participant24966
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24961
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24961
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: alpha-D-galactose 1-phosphate
STRUCTURE: chemicalStructure24965
SYNONYMS: galactose-1P
SYNONYMS: galactose-1-P
SYNONYMS: D-galactose-1-phosphate
SYNONYMS: galactose-1-phosphate
XREF: unificationXref24964
XREF: unificationXref24963
XREF: unificationXref24962

chemicalStructure24965
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GALACTOSE-1P-atom1" elementType="O" x2="7.6497" y2="-4.2"/> <atom id="GALACTOSE-1P-atom2" elementType="O" x2="0.0" y2="-5.6"/> <atom id="GALACTOSE-1P-atom3" elementType="O" x2="2.4249" y2="0.0"/> <atom id="GALACTOSE-1P-atom4" elementType="O" x2="0.0" y2="-1.4"/> <atom id="GALACTOSE-1P-atom5" elementType="O" x2="4.8497" y2="-1.4"/> <atom id="GALACTOSE-1P-atom6" elementType="O" x2="6.2497" y2="-5.6"/> <atom id="GALACTOSE-1P-atom7" elementType="O" x2="6.2497" y2="-2.8"/> <atom id="GALACTOSE-1P-atom8" elementType="C" x2="0.0" y2="-4.2"/> <atom id="GALACTOSE-1P-atom9" elementType="O" x2="2.4249" y2="-4.2"/> <atom id="GALACTOSE-1P-atom10" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="GALACTOSE-1P-atom11" elementType="C" x2="2.4249" y2="-1.4"/> <atom id="GALACTOSE-1P-atom12" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="GALACTOSE-1P-atom13" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="GALACTOSE-1P-atom14" elementType="C" x2="1.2124" y2="-3.5"/> <atom id="GALACTOSE-1P-atom15" elementType="C" x2="3.6373" y2="-3.5"/> <atom id="GALACTOSE-1P-atom16" elementType="P" x2="6.2497" y2="-4.2"/> <bond id="GALACTOSE-1P-bond1" atomRefs="GALACTOSE-1P-atom13 GALACTOSE-1P-atom15" order="1"/> <bond id="GALACTOSE-1P-bond2" atomRefs="GALACTOSE-1P-atom12 GALACTOSE-1P-atom14" order="1"/> <bond id="GALACTOSE-1P-bond3" atomRefs="GALACTOSE-1P-atom11 GALACTOSE-1P-atom13" order="1"/> <bond id="GALACTOSE-1P-bond4" atomRefs="GALACTOSE-1P-atom11 GALACTOSE-1P-atom12" order="1"/> <bond id="GALACTOSE-1P-bond5" atomRefs="GALACTOSE-1P-atom10 GALACTOSE-1P-atom16" order="1"/> <bond id="GALACTOSE-1P-bond6" atomRefs="GALACTOSE-1P-atom15 GALACTOSE-1P-atom10" order="1"/> <bond id="GALACTOSE-1P-bond7" atomRefs="GALACTOSE-1P-atom9 GALACTOSE-1P-atom15" order="1"/> <bond id="GALACTOSE-1P-bond8" atomRefs="GALACTOSE-1P-atom9 GALACTOSE-1P-atom14" order="1"/> <bond id="GALACTOSE-1P-bond9" atomRefs="GALACTOSE-1P-atom14 GALACTOSE-1P-atom8" order="1"/> <bond id="GALACTOSE-1P-bond10" atomRefs="GALACTOS…

unificationXref24964
type: unificationXref
DB: CapCyc
ID: GALACTOSE-1P

unificationXref24963
type: unificationXref
DB: CAS
ID: 2255-14-3

unificationXref24962
type: unificationXref
DB: LIGAND
ID: C00446

unificationXref25648
type: unificationXref
DB: CapCyc
ID: GALACTOKIN-RXN

phys-ent-participant25653
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25651
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25651
type: protein
NAME: GALACTOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25652

unificationXref25652
type: unificationXref
DB: CapCyc
ID: SGNU203734-MONOMER

unificationXref25650
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-640

catalysis25638
type: catalysis
CONTROLLED: biochemicalReaction25636
CONTROLLER: phys-ent-participant25642
NAME: GLUCONOKINASE
XREF: unificationXref25639

biochemicalReaction25636
type: biochemicalReaction
EC-NUMBER: 2.7.1.12
LEFT: phys-ent-participant20931
LEFT: phys-ent-participant22835
NAME: Gluconokinase
RIGHT: phys-ent-participant24807
RIGHT: phys-ent-participant20977
SYNONYMS: Gluconate kinase
XREF: unificationXref25637

phys-ent-participant22835
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22830
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22830
type: smallMolecule
MOLECULAR-WEIGHT: 196.157
NAME: gluconate
STRUCTURE: chemicalStructure22834
SYNONYMS: D-gluconate
SYNONYMS: D-gluconoate
SYNONYMS: gluconic acid
SYNONYMS: D-gluconic acid
SYNONYMS: dextronic acid
SYNONYMS: aldonic acid
SYNONYMS: maltonic acid
XREF: unificationXref22833
XREF: unificationXref22832
XREF: unificationXref22831

chemicalStructure22834
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLUCONATE-atom1" elementType="O" x2="0.99658" y2="0.50769"/> <atom id="GLUCONATE-atom2" elementType="H" x2="0.15556" y2="1.0"/> <atom id="GLUCONATE-atom3" elementType="O" x2="-1.0" y2="0.96239"/> <atom id="GLUCONATE-atom4" elementType="O" x2="0.15556" y2="0.45983"/> <atom id="GLUCONATE-atom5" elementType="C" x2="0.84615" y2="0.72991"/> <atom id="GLUCONATE-atom6" elementType="C" x2="0.50085" y2="0.72991"/> <atom id="GLUCONATE-atom7" elementType="O" x2="-0.17949" y2="1.0"/> <atom id="GLUCONATE-atom8" elementType="H" x2="-0.17949" y2="0.45983"/> <atom id="GLUCONATE-atom9" elementType="O" x2="-0.52479" y2="1.0"/> <atom id="GLUCONATE-atom10" elementType="H" x2="0.50085" y2="0.45983"/> <atom id="GLUCONATE-atom11" elementType="C" x2="0.15556" y2="0.72991"/> <atom id="GLUCONATE-atom12" elementType="C" x2="-0.86325" y2="0.72991"/> <atom id="GLUCONATE-atom13" elementType="C" x2="-0.17949" y2="0.72991"/> <atom id="GLUCONATE-atom14" elementType="O" x2="0.50085" y2="1.0"/> <atom id="GLUCONATE-atom15" elementType="O" x2="0.98291" y2="0.96581"/> <atom id="GLUCONATE-atom16" elementType="H" x2="-0.52479" y2="0.45983"/> <atom id="GLUCONATE-atom17" elementType="C" x2="-0.52479" y2="0.72991"/> <bond id="GLUCONATE-bond1" atomRefs="GLUCONATE-atom17 GLUCONATE-atom13" order="1"/> <bond id="GLUCONATE-bond2" atomRefs="GLUCONATE-atom16 GLUCONATE-atom17" order="1"/> <bond id="GLUCONATE-bond3" atomRefs="GLUCONATE-atom15 GLUCONATE-atom5" order="2"/> <bond id="GLUCONATE-bond4" atomRefs="GLUCONATE-atom14 GLUCONATE-atom6" order="1"/> <bond id="GLUCONATE-bond5" atomRefs="GLUCONATE-atom13 GLUCONATE-atom11" order="1"/> <bond id="GLUCONATE-bond6" atomRefs="GLUCONATE-atom12 GLUCONATE-atom17" order="1"/> <bond id="GLUCONATE-bond7" atomRefs="GLUCONATE-atom11 GLUCONATE-atom6" order="1"/> <bond id="GLUCONATE-bond8" atomRefs="GLUCONATE-atom10 GLUCONATE-atom6" order="1"/> <bond id="GLUCONATE-bond9" atomRefs="GLUCONATE-atom9 GLUCONATE-atom17" order="1"/> <bond id="GLUCONATE-bond10" atomRefs="GLUCONAT…

unificationXref22833
type: unificationXref
DB: CapCyc
ID: GLUCONATE

unificationXref22832
type: unificationXref
DB: CAS
ID: 526-95-4

unificationXref22831
type: unificationXref
DB: LIGAND
ID: C00257

unificationXref25637
type: unificationXref
DB: CapCyc
ID: GLUCONOKIN-RXN

phys-ent-participant25642
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25640
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25640
type: protein
NAME: GLUCONOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25641

unificationXref25641
type: unificationXref
DB: CapCyc
ID: SGNU200348-MONOMER

unificationXref25639
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-418

catalysis25622
type: catalysis
CONTROLLED: biochemicalReaction25620
CONTROLLER: phys-ent-participant25626
NAME: GLYCEROL KINASE
XREF: unificationXref25623

biochemicalReaction25620
type: biochemicalReaction
EC-NUMBER: 2.7.1.30
LEFT: phys-ent-participant24819
LEFT: phys-ent-participant20931
NAME: Glycerol kinase
RIGHT: phys-ent-participant24410
RIGHT: phys-ent-participant20977
SYNONYMS: ATP:glycerol 3-phosphotransferase
SYNONYMS: Glycerokinase
XREF: unificationXref25621

phys-ent-participant24819
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24814
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24814
type: smallMolecule
MOLECULAR-WEIGHT: 92.094
NAME: glycerol
STRUCTURE: chemicalStructure24818
SYNONYMS: 1,2,3-trihydroxypropane
SYNONYMS: glycerin
SYNONYMS: 1,2,3-trihydroxypropanol
XREF: unificationXref24817
XREF: unificationXref24816
XREF: unificationXref24815

chemicalStructure24818
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLYCEROL-atom1" elementType="C" x2="-0.00165" y2="-0.42149"/> <atom id="GLYCEROL-atom2" elementType="C" x2="0.49752" y2="-0.13058"/> <atom id="GLYCEROL-atom3" elementType="O" x2="-1.0" y2="-0.42149"/> <atom id="GLYCEROL-atom4" elementType="O" x2="-0.00165" y2="-1.0"/> <atom id="GLYCEROL-atom5" elementType="O" x2="0.99669" y2="-0.42149"/> <atom id="GLYCEROL-atom6" elementType="C" x2="-0.50083" y2="-0.13058"/> <bond id="GLYCEROL-bond1" atomRefs="GLYCEROL-atom6 GLYCEROL-atom1" order="1"/> <bond id="GLYCEROL-bond2" atomRefs="GLYCEROL-atom5 GLYCEROL-atom2" order="1"/> <bond id="GLYCEROL-bond3" atomRefs="GLYCEROL-atom4 GLYCEROL-atom1" order="1"/> <bond id="GLYCEROL-bond4" atomRefs="GLYCEROL-atom3 GLYCEROL-atom6" order="1"/> <bond id="GLYCEROL-bond5" atomRefs="GLYCEROL-atom2 GLYCEROL-atom1" order="1"/> <formula concise="C 3 H 8 O 3" formalCharge="0"/> 92.094 C(O)C(O)CO

unificationXref24817
type: unificationXref
DB: CapCyc
ID: GLYCEROL

unificationXref24816
type: unificationXref
DB: CAS
ID: 56-81-5

unificationXref24815
type: unificationXref
DB: LIGAND
ID: C00116

unificationXref25621
type: unificationXref
DB: CapCyc
ID: GLYCEROL-KIN-RXN

phys-ent-participant25626
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25624
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25624
type: protein
NAME: GLYCEROL KINASE
ORGANISM: bioSource20982
XREF: unificationXref25625

unificationXref25625
type: unificationXref
DB: CapCyc
ID: SGNU197189-MONOMER

unificationXref25623
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-151

catalysis25576
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25580
NAME: PYRUVATE KINASE
XREF: unificationXref25577

biochemicalReaction25519
type: biochemicalReaction
DELTA-G: -7.5
EC-NUMBER: 2.7.1.40
LEFT: phys-ent-participant21010
LEFT: phys-ent-participant20931
NAME: Pyruvate kinase
RIGHT: phys-ent-participant23048
RIGHT: phys-ent-participant20977
RIGHT: phys-ent-participant20964
SYNONYMS: Phosphoenol transphosphorylase
SYNONYMS: Phosphoenolpyruvate kinase
SYNONYMS: phosphoenolpyruvate dephosphorylation
SYNONYMS: pyruvate phosphorylation
XREF: unificationXref25520

phys-ent-participant20964
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20956
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

unificationXref25520
type: unificationXref
DB: CapCyc
ID: PEPDEPHOS-RXN

phys-ent-participant25580
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25578
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25578
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25579

unificationXref25579
type: unificationXref
DB: CapCyc
ID: SGNU196751-MONOMER

unificationXref25577
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-99

catalysis25571
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25575
NAME: PYRUVATE KINASE
XREF: unificationXref25572

phys-ent-participant25575
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25573
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25573
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25574

unificationXref25574
type: unificationXref
DB: CapCyc
ID: SGNU197255-MONOMER

unificationXref25572
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-165

catalysis25566
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25570
NAME: PYRUVATE KINASE
XREF: unificationXref25567

phys-ent-participant25570
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25568
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25568
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25569

unificationXref25569
type: unificationXref
DB: CapCyc
ID: SGNU197420-MONOMER

unificationXref25567
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-179

catalysis25561
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25565
NAME: PYRUVATE KINASE
XREF: unificationXref25562

phys-ent-participant25565
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25563
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25563
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25564

unificationXref25564
type: unificationXref
DB: CapCyc
ID: SGNU199697-MONOMER

unificationXref25562
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-370

catalysis25556
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25560
NAME: PYRUVATE KINASE
XREF: unificationXref25557

phys-ent-participant25560
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25558
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25558
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25559

unificationXref25559
type: unificationXref
DB: CapCyc
ID: SGNU200176-MONOMER

unificationXref25557
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-407

catalysis25551
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25555
NAME: PYRUVATE KINASE
XREF: unificationXref25552

phys-ent-participant25555
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25553
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25553
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25554

unificationXref25554
type: unificationXref
DB: CapCyc
ID: SGNU200552-MONOMER

unificationXref25552
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-429

catalysis25546
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25550
NAME: PYRUVATE KINASE
XREF: unificationXref25547

phys-ent-participant25550
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25548
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25548
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25549

unificationXref25549
type: unificationXref
DB: CapCyc
ID: SGNU200909-MONOMER

unificationXref25547
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-459

catalysis25541
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25545
NAME: PYRUVATE KINASE
XREF: unificationXref25542

phys-ent-participant25545
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25543
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25543
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25544

unificationXref25544
type: unificationXref
DB: CapCyc
ID: SGNU201095-MONOMER

unificationXref25542
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-467

catalysis25536
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25540
NAME: PYRUVATE KINASE
XREF: unificationXref25537

phys-ent-participant25540
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25538
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25538
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25539

unificationXref25539
type: unificationXref
DB: CapCyc
ID: SGNU201599-MONOMER

unificationXref25537
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-511

catalysis25531
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25535
NAME: PYRUVATE KINASE
XREF: unificationXref25532

phys-ent-participant25535
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25533
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25533
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25534

unificationXref25534
type: unificationXref
DB: CapCyc
ID: SGNU202057-MONOMER

unificationXref25532
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-543

catalysis25526
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25530
NAME: PYRUVATE KINASE
XREF: unificationXref25527

phys-ent-participant25530
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25528
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25528
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25529

unificationXref25529
type: unificationXref
DB: CapCyc
ID: SGNU202125-MONOMER

unificationXref25527
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-548

catalysis25521
type: catalysis
CONTROLLED: biochemicalReaction25519
CONTROLLER: phys-ent-participant25525
NAME: PYRUVATE KINASE
XREF: unificationXref25522

phys-ent-participant25525
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25523
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25523
type: protein
NAME: PYRUVATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25524

unificationXref25524
type: unificationXref
DB: CapCyc
ID: SGNU199242-MONOMER

unificationXref25522
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-754

catalysis25514
type: catalysis
CONTROLLED: biochemicalReaction25512
CONTROLLER: phys-ent-participant25518
NAME: PHOSPHORIBULOKINASE
XREF: unificationXref25515

biochemicalReaction25512
type: biochemicalReaction
EC-NUMBER: 2.7.1.19
LEFT: phys-ent-participant22099
LEFT: phys-ent-participant20931
NAME: Phosphoribulokinase
RIGHT: phys-ent-participant23336
RIGHT: phys-ent-participant20977
SYNONYMS: Phosphopentokinase
XREF: unificationXref25513

phys-ent-participant23336
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23332
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23332
type: smallMolecule
MOLECULAR-WEIGHT: 310.091
NAME: D-ribulose-1,5-bisphosphate
STRUCTURE: chemicalStructure23335
SYNONYMS: ribulose 1,5-bisphosphate
SYNONYMS: D-ribulose-1,5-diphosphate
SYNONYMS: D-ribulose-1,5-P2
XREF: unificationXref23334
XREF: unificationXref23333

chemicalStructure23335
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="d-ribulose-1,5-p_{2}-atom1" elementType="O" x2="-0.24316" y2="0.99678"/> <atom id="d-ribulose-1,5-p_{2}-atom2" elementType="O" x2="0.10145" y2="-0.65539"/> <atom id="d-ribulose-1,5-p_{2}-atom3" elementType="O" x2="-0.65539" y2="0.33655"/> <atom id="d-ribulose-1,5-p_{2}-atom4" elementType="O" x2="-0.60386" y2="-0.65539"/> <atom id="d-ribulose-1,5-p_{2}-atom5" elementType="C" x2="-1.0" y2="0.00805"/> <atom id="d-ribulose-1,5-p_{2}-atom6" elementType="P" x2="-0.24316" y2="0.65217"/> <atom id="d-ribulose-1,5-p_{2}-atom7" elementType="C" x2="-1.0" y2="-0.65539"/> <atom id="d-ribulose-1,5-p_{2}-atom8" elementType="O" x2="-0.65539" y2="0.00805"/> <atom id="d-ribulose-1,5-p_{2}-atom9" elementType="O" x2="-0.24316" y2="-0.31079"/> <atom id="d-ribulose-1,5-p_{2}-atom10" elementType="O" x2="-0.65539" y2="-0.31723"/> <atom id="d-ribulose-1,5-p_{2}-atom11" elementType="P" x2="-0.24316" y2="-0.65539"/> <atom id="d-ribulose-1,5-p_{2}-atom12" elementType="O" x2="-0.24316" y2="0.30757"/> <atom id="d-ribulose-1,5-p_{2}-atom13" elementType="C" x2="-1.0" y2="0.33655"/> <atom id="d-ribulose-1,5-p_{2}-atom14" elementType="O" x2="-0.65862" y2="0.65217"/> <atom id="d-ribulose-1,5-p_{2}-atom15" elementType="C" x2="-1.0" y2="-0.31723"/> <atom id="d-ribulose-1,5-p_{2}-atom16" elementType="O" x2="0.10145" y2="0.65217"/> <atom id="d-ribulose-1,5-p_{2}-atom17" elementType="O" x2="-0.24316" y2="-1.0"/> <atom id="d-ribulose-1,5-p_{2}-atom18" elementType="C" x2="-1.0" y2="0.65217"/> <bond id="d-ribulose-1,5-p_{2}-bond1" atomRefs="d-ribulose-1,5-p_{2}-atom18 d-ribulose-1,5-p_{2}-atom14" order="1"/> <bond id="d-ribulose-1,5-p_{2}-bond2" atomRefs="d-ribulose-1,5-p_{2}-atom17 d-ribulose-1,5-p_{2}-atom11" order="1"/> <bond id="d-ribulose-1,5-p_{2}-bond3" atomRefs="d-ribulose-1,5-p_{2}-atom16 d-ribulose-1,5-p_{2}-atom6" order="1"/> <bond id="d-ribulose-1,5-p_{2}-bond4" atomRefs="d-ribulose-1,5-p_{2}-atom15 d-ribulose-1,5-p_{2}-atom5" order="1"/> <bond id="d-ribulose-1,5-p_{2}-bond5" atomRefs="d…

unificationXref23334
type: unificationXref
DB: CapCyc
ID: d-ribulose-1,5-p_{2}

unificationXref23333
type: unificationXref
DB: CAS
ID: 14689-84-0

unificationXref25513
type: unificationXref
DB: CapCyc
ID: PHOSPHORIBULOKINASE-RXN

phys-ent-participant25518
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25516
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25516
type: protein
NAME: PHOSPHORIBULOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25517

unificationXref25517
type: unificationXref
DB: CapCyc
ID: SGNU199745-MONOMER

unificationXref25515
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-374

catalysis25510
type: catalysis
CONTROLLED: biochemicalReaction25496
CONTROLLER: phys-ent-participant25481
NAME: PYRIDOXAL KINASE
XREF: unificationXref25511

biochemicalReaction25496
type: biochemicalReaction
EC-NUMBER: 2.7.1.-
LEFT: phys-ent-participant20931
LEFT: phys-ent-participant25503
NAME: PNKIN-RXN
RIGHT: phys-ent-participant20977
RIGHT: phys-ent-participant25509
XREF: unificationXref25497

phys-ent-participant25503
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25498
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25498
type: smallMolecule
MOLECULAR-WEIGHT: 169.18
NAME: pyridoxine
STRUCTURE: chemicalStructure25502
SYNONYMS: vitamin B6
SYNONYMS: 2-methyl-3-hydroxy-4,5-bis(hydroxy-methyl) pyridine
XREF: unificationXref25501
XREF: unificationXref25500
XREF: unificationXref25499

chemicalStructure25502
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRIDOXINE-atom1" elementType="C" x2="-0.59734" y2="-0.14143"/> <atom id="PYRIDOXINE-atom2" elementType="C" x2="-0.20799" y2="-0.797"/> <atom id="PYRIDOXINE-atom3" elementType="C" x2="0.17471" y2="0.30782"/> <atom id="PYRIDOXINE-atom4" elementType="O" x2="0.19468" y2="-1.0"/> <atom id="PYRIDOXINE-atom5" elementType="C" x2="-0.20799" y2="-0.35774"/> <atom id="PYRIDOXINE-atom6" elementType="C" x2="-0.59734" y2="0.30782"/> <atom id="PYRIDOXINE-atom7" elementType="C" x2="0.17471" y2="-0.14143"/> <atom id="PYRIDOXINE-atom8" elementType="O" x2="0.99667" y2="-0.40433"/> <atom id="PYRIDOXINE-atom9" elementType="N" x2="-0.20799" y2="0.53078"/> <atom id="PYRIDOXINE-atom10" elementType="O" x2="-0.96339" y2="-0.401"/> <atom id="PYRIDOXINE-atom11" elementType="C" x2="-1.0" y2="0.50416"/> <atom id="PYRIDOXINE-atom12" elementType="C" x2="0.54742" y2="-0.40433"/> <bond id="PYRIDOXINE-bond1" atomRefs="PYRIDOXINE-atom12 PYRIDOXINE-atom8" order="1"/> <bond id="PYRIDOXINE-bond2" atomRefs="PYRIDOXINE-atom11 PYRIDOXINE-atom6" order="1"/> <bond id="PYRIDOXINE-bond3" atomRefs="PYRIDOXINE-atom10 PYRIDOXINE-atom1" order="1"/> <bond id="PYRIDOXINE-bond4" atomRefs="PYRIDOXINE-atom9 PYRIDOXINE-atom3" order="A"/> <bond id="PYRIDOXINE-bond5" atomRefs="PYRIDOXINE-atom7 PYRIDOXINE-atom12" order="1"/> <bond id="PYRIDOXINE-bond6" atomRefs="PYRIDOXINE-atom6 PYRIDOXINE-atom9" order="A"/> <bond id="PYRIDOXINE-bond7" atomRefs="PYRIDOXINE-atom7 PYRIDOXINE-atom5" order="A"/> <bond id="PYRIDOXINE-bond8" atomRefs="PYRIDOXINE-atom4 PYRIDOXINE-atom2" order="1"/> <bond id="PYRIDOXINE-bond9" atomRefs="PYRIDOXINE-atom3 PYRIDOXINE-atom7" order="A"/> <bond id="PYRIDOXINE-bond10" atomRefs="PYRIDOXINE-atom2 PYRIDOXINE-atom5" order="1"/> <bond id="PYRIDOXINE-bond11" atomRefs="PYRIDOXINE-atom5 PYRIDOXINE-atom1" order="A"/> <bond id="PYRIDOXINE-bond12" atomRefs="PYRIDOXINE-atom1 PYRIDOXINE-atom6" order="A"/> <formula concise="C 8 H 11 N 1 O 3" formalCharge="0"/> 169.18 C(O)c1(c(CO)cnc(C)c(O)1)

unificationXref25501
type: unificationXref
DB: CapCyc
ID: PYRIDOXINE

unificationXref25500
type: unificationXref
DB: CAS
ID: 65-23-6

unificationXref25499
type: unificationXref
DB: LIGAND
ID: C00314

unificationXref25497
type: unificationXref
DB: CapCyc
ID: PNKIN-RXN

phys-ent-participant25481
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25479
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25479
type: protein
NAME: PYRIDOXAL KINASE
ORGANISM: bioSource20982
XREF: unificationXref25480

unificationXref25480
type: unificationXref
DB: CapCyc
ID: SGNU204878-MONOMER

unificationXref25511
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-707

catalysis25477
type: catalysis
CONTROLLED: biochemicalReaction25463
CONTROLLER: phys-ent-participant25481
NAME: PYRIDOXAL KINASE
XREF: unificationXref25478

biochemicalReaction25463
type: biochemicalReaction
EC-NUMBER: 2.7.1.35
LEFT: phys-ent-participant20931
LEFT: phys-ent-participant25470
NAME: Pyridoxal kinase
RIGHT: phys-ent-participant20977
RIGHT: phys-ent-participant25476
SYNONYMS: Vitamin B6 kinase
SYNONYMS: Pyridoxamine kinase
SYNONYMS: Pyridoxine kinase
XREF: unificationXref25464

phys-ent-participant25470
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25465
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25465
type: smallMolecule
MOLECULAR-WEIGHT: 167.164
NAME: pyridoxal
STRUCTURE: chemicalStructure25469
XREF: unificationXref25468
XREF: unificationXref25467
XREF: unificationXref25466

chemicalStructure25469
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="PYRIDOXAL-atom1" elementType="C" x2="-0.59734" y2="-0.14143"/> <atom id="PYRIDOXAL-atom2" elementType="C" x2="-0.20799" y2="-0.797"/> <atom id="PYRIDOXAL-atom3" elementType="C" x2="0.17471" y2="0.30782"/> <atom id="PYRIDOXAL-atom4" elementType="O" x2="0.19468" y2="-1.0"/> <atom id="PYRIDOXAL-atom5" elementType="C" x2="-0.20799" y2="-0.35774"/> <atom id="PYRIDOXAL-atom6" elementType="C" x2="-0.59734" y2="0.30782"/> <atom id="PYRIDOXAL-atom7" elementType="C" x2="0.17471" y2="-0.14143"/> <atom id="PYRIDOXAL-atom8" elementType="O" x2="0.99667" y2="-0.40433"/> <atom id="PYRIDOXAL-atom9" elementType="N" x2="-0.20799" y2="0.53078"/> <atom id="PYRIDOXAL-atom10" elementType="O" x2="-0.96339" y2="-0.401"/> <atom id="PYRIDOXAL-atom11" elementType="C" x2="-1.0" y2="0.50416"/> <atom id="PYRIDOXAL-atom12" elementType="C" x2="0.54742" y2="-0.40433"/> <bond id="PYRIDOXAL-bond1" atomRefs="PYRIDOXAL-atom12 PYRIDOXAL-atom8" order="1"/> <bond id="PYRIDOXAL-bond2" atomRefs="PYRIDOXAL-atom11 PYRIDOXAL-atom6" order="1"/> <bond id="PYRIDOXAL-bond3" atomRefs="PYRIDOXAL-atom10 PYRIDOXAL-atom1" order="1"/> <bond id="PYRIDOXAL-bond4" atomRefs="PYRIDOXAL-atom9 PYRIDOXAL-atom3" order="A"/> <bond id="PYRIDOXAL-bond5" atomRefs="PYRIDOXAL-atom7 PYRIDOXAL-atom12" order="1"/> <bond id="PYRIDOXAL-bond6" atomRefs="PYRIDOXAL-atom6 PYRIDOXAL-atom9" order="A"/> <bond id="PYRIDOXAL-bond7" atomRefs="PYRIDOXAL-atom7 PYRIDOXAL-atom5" order="A"/> <bond id="PYRIDOXAL-bond8" atomRefs="PYRIDOXAL-atom4 PYRIDOXAL-atom2" order="2"/> <bond id="PYRIDOXAL-bond9" atomRefs="PYRIDOXAL-atom3 PYRIDOXAL-atom7" order="A"/> <bond id="PYRIDOXAL-bond10" atomRefs="PYRIDOXAL-atom2 PYRIDOXAL-atom5" order="1"/> <bond id="PYRIDOXAL-bond11" atomRefs="PYRIDOXAL-atom5 PYRIDOXAL-atom1" order="A"/> <bond id="PYRIDOXAL-bond12" atomRefs="PYRIDOXAL-atom1 PYRIDOXAL-atom6" order="A"/> <formula concise="C 8 H 9 N 1 O 3" formalCharge="0"/> 167.164 C(=O)c1(c(CO)cnc(C)c(O)1)

unificationXref25468
type: unificationXref
DB: CapCyc
ID: PYRIDOXAL

unificationXref25467
type: unificationXref
DB: CAS
ID: 66-72-8

unificationXref25466
type: unificationXref
DB: LIGAND
ID: C00250

unificationXref25464
type: unificationXref
DB: CapCyc
ID: PYRIDOXKIN-RXN

unificationXref25478
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-708

catalysis25452
type: catalysis
CONTROLLED: biochemicalReaction25445
CONTROLLER: phys-ent-participant25456
NAME: RIBOKINASE
XREF: unificationXref25453

biochemicalReaction25445
type: biochemicalReaction
EC-NUMBER: 2.7.1.15
LEFT: phys-ent-participant24049
LEFT: phys-ent-participant20931
NAME: Ribokinase
RIGHT: phys-ent-participant21816
RIGHT: phys-ent-participant20977
XREF: unificationXref25446

phys-ent-participant24049
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24044
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24044
type: smallMolecule
MOLECULAR-WEIGHT: 150.131
NAME: D-ribose
STRUCTURE: chemicalStructure24048
SYNONYMS: α-D-ribose
SYNONYMS: ribose
SYNONYMS: α-D-ribose-5
XREF: unificationXref24047
XREF: unificationXref24046
XREF: unificationXref24045

chemicalStructure24048
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="RIBOSE-atom1" elementType="O" x2="0.0" y2="-4.2661"/> <atom id="RIBOSE-atom2" elementType="O" x2="5.2193" y2="-2.8967"/> <atom id="RIBOSE-atom3" elementType="O" x2="4.2781" y2="0.0"/> <atom id="RIBOSE-atom4" elementType="O" x2="1.2323" y2="0.0"/> <atom id="RIBOSE-atom5" elementType="C" x2="0.2911" y2="-2.8967"/> <atom id="RIBOSE-atom6" elementType="O" x2="2.7552" y2="-3.287"/> <atom id="RIBOSE-atom7" elementType="C" x2="3.8878" y2="-2.4641"/> <atom id="RIBOSE-atom8" elementType="C" x2="3.4552" y2="-1.1326"/> <atom id="RIBOSE-atom9" elementType="C" x2="2.0552" y2="-1.1326"/> <atom id="RIBOSE-atom10" elementType="C" x2="1.6226" y2="-2.4641"/> <bond id="RIBOSE-bond1" atomRefs="RIBOSE-atom9 RIBOSE-atom10" order="1"/> <bond id="RIBOSE-bond2" atomRefs="RIBOSE-atom8 RIBOSE-atom9" order="1"/> <bond id="RIBOSE-bond3" atomRefs="RIBOSE-atom7 RIBOSE-atom8" order="1"/> <bond id="RIBOSE-bond4" atomRefs="RIBOSE-atom6 RIBOSE-atom10" order="1"/> <bond id="RIBOSE-bond5" atomRefs="RIBOSE-atom6 RIBOSE-atom7" order="1"/> <bond id="RIBOSE-bond6" atomRefs="RIBOSE-atom10 RIBOSE-atom5" order="1"/> <bond id="RIBOSE-bond7" atomRefs="RIBOSE-atom9 RIBOSE-atom4" order="1"/> <bond id="RIBOSE-bond8" atomRefs="RIBOSE-atom8 RIBOSE-atom3" order="1"/> <bond id="RIBOSE-bond9" atomRefs="RIBOSE-atom2 RIBOSE-atom7" order="1"/> <bond id="RIBOSE-bond10" atomRefs="RIBOSE-atom1 RIBOSE-atom5" order="1"/> <formula concise="C 5 H 10 O 5" formalCharge="0"/> 150.131 C(O)C1(C(O)C(O)C(O1)O)

unificationXref24047
type: unificationXref
DB: CapCyc
ID: RIBOSE

unificationXref24046
type: unificationXref
DB: CAS
ID: 50-69-1

unificationXref24045
type: unificationXref
DB: LIGAND
ID: C00121

unificationXref25446
type: unificationXref
DB: CapCyc
ID: RIBOKIN-RXN

phys-ent-participant25456
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25454
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25454
type: protein
NAME: RIBOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25455

unificationXref25455
type: unificationXref
DB: CapCyc
ID: SGNU199795-MONOMER

unificationXref25453
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-376

catalysis25447
type: catalysis
CONTROLLED: biochemicalReaction25445
CONTROLLER: phys-ent-participant25451
NAME: RIBOKINASE
XREF: unificationXref25448

phys-ent-participant25451
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25449
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25449
type: protein
NAME: RIBOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25450

unificationXref25450
type: unificationXref
DB: CapCyc
ID: SGNU205474-MONOMER

unificationXref25448
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-723

catalysis25441
type: catalysis
CONTROLLED: biochemicalReaction25427
CONTROLLER: phys-ent-participant25386
NAME: XYLULOSE KINASE
XREF: unificationXref25442

biochemicalReaction25427
type: biochemicalReaction
EC-NUMBER: 2.7.1.-
LEFT: phys-ent-participant25433
LEFT: phys-ent-participant20931
NAME: RXN0-382
RIGHT: phys-ent-participant25438
RIGHT: phys-ent-participant20977
XREF: unificationXref25428

phys-ent-participant25433
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25429
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25429
type: smallMolecule
MOLECULAR-WEIGHT: 134.132
NAME: 1-deoxy-D-xylulose
STRUCTURE: chemicalStructure25432
SYNONYMS: 1-deoxy-xylulose
XREF: unificationXref25431
XREF: unificationXref25430

chemicalStructure25432
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-1093-atom1" elementType="C" x2="-0.3021807" y2="-0.9937694"/> <atom id="CPD-1093-atom2" elementType="C" x2="-0.3021807" y2="0.5077882"/> <atom id="CPD-1093-atom3" elementType="C" x2="-0.3021807" y2="1.0"/> <atom id="CPD-1093-atom4" elementType="C" x2="-0.3021807" y2="0.0031152964"/> <atom id="CPD-1093-atom5" elementType="C" x2="-0.3021807" y2="-0.48909652"/> <atom id="CPD-1093-atom6" elementType="O" x2="0.29595017" y2="0.5077882"/> <atom id="CPD-1093-atom7" elementType="O" x2="0.29595017" y2="1.0"/> <atom id="CPD-1093-atom8" elementType="O" x2="0.29595017" y2="-0.48909652"/> <atom id="CPD-1093-atom9" elementType="O" x2="-1.0" y2="0.0031152964"/> <bond id="CPD-1093-bond1" atomRefs="CPD-1093-atom9 CPD-1093-atom4" order="1"/> <bond id="CPD-1093-bond2" atomRefs="CPD-1093-atom8 CPD-1093-atom5" order="2"/> <bond id="CPD-1093-bond3" atomRefs="CPD-1093-atom6 CPD-1093-atom2" order="1"/> <bond id="CPD-1093-bond4" atomRefs="CPD-1093-atom5 CPD-1093-atom4" order="1"/> <bond id="CPD-1093-bond5" atomRefs="CPD-1093-atom4 CPD-1093-atom2" order="1"/> <bond id="CPD-1093-bond6" atomRefs="CPD-1093-atom3 CPD-1093-atom7" order="1"/> <bond id="CPD-1093-bond7" atomRefs="CPD-1093-atom2 CPD-1093-atom3" order="1"/> <bond id="CPD-1093-bond8" atomRefs="CPD-1093-atom1 CPD-1093-atom5" order="1"/> <formula concise="C 5 H 10 O 4" formalCharge="0"/> 134.132 CC(=O)C(O)C(O)CO

unificationXref25431
type: unificationXref
DB: CapCyc
ID: CPD-1093

unificationXref25430
type: unificationXref
DB: LIGAND
ID: C06257

unificationXref25428
type: unificationXref
DB: CapCyc
ID: RXN0-382

phys-ent-participant25386
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25384
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25384
type: protein
NAME: XYLULOSE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25385

unificationXref25385
type: unificationXref
DB: CapCyc
ID: SGNU197533-MONOMER

unificationXref25442
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-191

catalysis25439
type: catalysis
CONTROLLED: biochemicalReaction25427
CONTROLLER: phys-ent-participant25381
NAME: XYLULOSE KINASE
XREF: unificationXref25440

phys-ent-participant25381
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25379
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25379
type: protein
NAME: XYLULOSE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25380

unificationXref25380
type: unificationXref
DB: CapCyc
ID: SGNU200763-MONOMER

unificationXref25440
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-446

catalysis25410
type: catalysis
CONTROLLED: biochemicalReaction25404
CONTROLLER: phys-ent-participant25403
NAME: URIDINE KINASE
XREF: unificationXref25411

biochemicalReaction25404
type: biochemicalReaction
EC-NUMBER: 2.7.1.48
LEFT: phys-ent-participant23761
LEFT: phys-ent-participant20931
NAME: Uridine kinase
RIGHT: phys-ent-participant23402
RIGHT: phys-ent-participant20977
SYNONYMS: Uridine monophosphokinase
XREF: unificationXref25405

phys-ent-participant23761
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23756
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23756
type: smallMolecule
MOLECULAR-WEIGHT: 244.204
NAME: uridine
STRUCTURE: chemicalStructure23760
XREF: unificationXref23759
XREF: unificationXref23758
XREF: unificationXref23757

chemicalStructure23760
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="URIDINE-atom1" elementType="H" x2="3.3893" y2="-7.8309"/> <atom id="URIDINE-atom2" elementType="O" x2="5.4767" y2="-9.2666"/> <atom id="URIDINE-atom3" elementType="O" x2="3.2556" y2="-5.5263"/> <atom id="URIDINE-atom4" elementType="O" x2="0.0" y2="-2.6211"/> <atom id="URIDINE-atom5" elementType="O" x2="2.3375" y2="0.0"/> <atom id="URIDINE-atom6" elementType="O" x2="4.1575" y2="0.0"/> <atom id="URIDINE-atom7" elementType="C" x2="6.495" y2="-7.3296"/> <atom id="URIDINE-atom8" elementType="C" x2="6.495" y2="-6.1776"/> <atom id="URIDINE-atom9" elementType="C" x2="1.1688" y2="-3.3392"/> <atom id="URIDINE-atom10" elementType="O" x2="3.2389" y2="-3.4395"/> <atom id="URIDINE-atom11" elementType="C" x2="5.4767" y2="-7.914"/> <atom id="URIDINE-atom12" elementType="C" x2="4.4578" y2="-6.1776"/> <atom id="URIDINE-atom13" elementType="C" x2="2.3375" y2="-1.3693"/> <atom id="URIDINE-atom14" elementType="C" x2="4.1575" y2="-1.3693"/> <atom id="URIDINE-atom15" elementType="C" x2="2.0367" y2="-2.6546"/> <atom id="URIDINE-atom16" elementType="C" x2="4.4578" y2="-2.6049"/> <atom id="URIDINE-atom17" elementType="N" x2="4.4578" y2="-7.3296"/> <atom id="URIDINE-atom18" elementType="N" x2="5.4767" y2="-5.5765"/> <bond id="URIDINE-bond1" atomRefs="URIDINE-atom16 URIDINE-atom18" order="1"/> <bond id="URIDINE-bond2" atomRefs="URIDINE-atom14 URIDINE-atom16" order="1"/> <bond id="URIDINE-bond3" atomRefs="URIDINE-atom13 URIDINE-atom15" order="1"/> <bond id="URIDINE-bond4" atomRefs="URIDINE-atom13 URIDINE-atom14" order="1"/> <bond id="URIDINE-bond5" atomRefs="URIDINE-atom12 URIDINE-atom18" order="A"/> <bond id="URIDINE-bond6" atomRefs="URIDINE-atom17 URIDINE-atom12" order="A"/> <bond id="URIDINE-bond7" atomRefs="URIDINE-atom11 URIDINE-atom17" order="A"/> <bond id="URIDINE-bond8" atomRefs="URIDINE-atom10 URIDINE-atom16" order="1"/> <bond id="URIDINE-bond9" atomRefs="URIDINE-atom10 URIDINE-atom15" order="1"/> <bond id="URIDINE-bond10" atomRefs="URIDINE-atom15 URIDINE-atom9" order="1"/> <…

unificationXref23759
type: unificationXref
DB: CapCyc
ID: URIDINE

unificationXref23758
type: unificationXref
DB: CAS
ID: 58-96-8

unificationXref23757
type: unificationXref
DB: LIGAND
ID: C00299

unificationXref25405
type: unificationXref
DB: CapCyc
ID: URIDINEKIN-RXN

phys-ent-participant25403
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25401
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25401
type: protein
NAME: URIDINE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25402

unificationXref25402
type: unificationXref
DB: CapCyc
ID: SGNU198354-MONOMER

unificationXref25411
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-286

catalysis25408
type: catalysis
CONTROLLED: biochemicalReaction25404
CONTROLLER: phys-ent-participant25398
NAME: URIDINE KINASE
XREF: unificationXref25409

phys-ent-participant25398
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25396
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25396
type: protein
NAME: URIDINE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25397

unificationXref25397
type: unificationXref
DB: CapCyc
ID: SGNU201996-MONOMER

unificationXref25409
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-537

catalysis25406
type: catalysis
CONTROLLED: biochemicalReaction25404
CONTROLLER: phys-ent-participant25393
NAME: URIDINE KINASE
XREF: unificationXref25407

phys-ent-participant25393
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25391
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25391
type: protein
NAME: URIDINE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25392

unificationXref25392
type: unificationXref
DB: CapCyc
ID: SGNU202040-MONOMER

unificationXref25407
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-540

catalysis25399
type: catalysis
CONTROLLED: biochemicalReaction25387
CONTROLLER: phys-ent-participant25403
NAME: URIDINE KINASE
XREF: unificationXref25400

biochemicalReaction25387
type: biochemicalReaction
EC-NUMBER: 2.7.1.48
LEFT: phys-ent-participant23761
LEFT: phys-ent-participant21278
NAME: Uridine kinase
RIGHT: phys-ent-participant23402
RIGHT: phys-ent-participant21290
SYNONYMS: Uridine monophosphokinase
XREF: unificationXref25388

phys-ent-participant21278
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21272
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21272
type: smallMolecule
MOLECULAR-WEIGHT: 523.183
NAME: GTP
STRUCTURE: chemicalStructure21277
SYNONYMS: guanylyl imidodiphosphate
SYNONYMS: guanosine 5'-triphosphate
SYNONYMS: guanosine-triphosphate
XREF: unificationXref21276
XREF: unificationXref21275
XREF: unificationXref21274
XREF: unificationXref21273

chemicalStructure21277
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GTP-atom1" elementType="H" x2="7.9942" y2="-7.7302"/> <atom id="GTP-atom2" elementType="N" x2="8.0267" y2="-4.9825"/> <atom id="GTP-atom3" elementType="O" x2="10.366" y2="-9.045"/> <atom id="GTP-atom4" elementType="O" x2="1.3665" y2="-3.2841"/> <atom id="GTP-atom5" elementType="O" x2="6.8077" y2="-3.2673"/> <atom id="GTP-atom6" elementType="O" x2="4.0905" y2="-3.279"/> <atom id="GTP-atom7" elementType="O" x2="10.0611" y2="-0.0081"/> <atom id="GTP-atom8" elementType="O" x2="13.0166" y2="0.0"/> <atom id="GTP-atom9" elementType="O" x2="0.0" y2="-1.9286"/> <atom id="GTP-atom10" elementType="O" x2="1.3624" y2="-0.5688"/> <atom id="GTP-atom11" elementType="O" x2="6.8036" y2="-0.5655"/> <atom id="GTP-atom12" elementType="O" x2="4.0864" y2="-0.5637"/> <atom id="GTP-atom13" elementType="C" x2="13.6467" y2="-6.3286"/> <atom id="GTP-atom14" elementType="C" x2="9.166" y2="-2.8132"/> <atom id="GTP-atom15" elementType="N" x2="12.8549" y2="-7.4386"/> <atom id="GTP-atom16" elementType="N" x2="10.3698" y2="-4.9621"/> <atom id="GTP-atom17" elementType="O" x2="8.1586" y2="-1.9134"/> <atom id="GTP-atom18" elementType="O" x2="11.5343" y2="-3.1772"/> <atom id="GTP-atom19" elementType="O" x2="2.724" y2="-1.9235"/> <atom id="GTP-atom20" elementType="O" x2="5.4479" y2="-1.9184"/> <atom id="GTP-atom21" elementType="C" x2="9.1999" y2="-5.6526"/> <atom id="GTP-atom22" elementType="C" x2="10.3698" y2="-7.6941"/> <atom id="GTP-atom23" elementType="C" x2="11.5547" y2="-7.0186"/> <atom id="GTP-atom24" elementType="C" x2="11.5547" y2="-5.6526"/> <atom id="GTP-atom25" elementType="C" x2="10.449" y2="-2.3907"/> <atom id="GTP-atom26" elementType="C" x2="10.859" y2="-1.0981"/> <atom id="GTP-atom27" elementType="C" x2="12.2173" y2="-1.0981"/> <atom id="GTP-atom28" elementType="C" x2="12.635" y2="-2.3907"/> <atom id="GTP-atom29" elementType="N" x2="9.1999" y2="-7.0186"/> <atom id="GTP-atom30" elementType="N" x2="12.8516" y2="-5.2444"/> <atom id="GTP-atom31" elementType="P" x2="1.365" y2="-1.926…

unificationXref21276
type: unificationXref
DB: CapCyc
ID: GTP

unificationXref21275
type: unificationXref
DB: CAS
ID: 86-01-1

unificationXref21274
type: unificationXref
DB: LIGAND
ID: c00044

unificationXref21273
type: unificationXref
DB: LIGAND
ID: C00044

unificationXref25388
type: unificationXref
DB: CapCyc
ID: URKI-RXN

unificationXref25400
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-287

catalysis25394
type: catalysis
CONTROLLED: biochemicalReaction25387
CONTROLLER: phys-ent-participant25398
NAME: URIDINE KINASE
XREF: unificationXref25395

unificationXref25395
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-538

catalysis25389
type: catalysis
CONTROLLED: biochemicalReaction25387
CONTROLLER: phys-ent-participant25393
NAME: URIDINE KINASE
XREF: unificationXref25390

unificationXref25390
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-541

catalysis25382
type: catalysis
CONTROLLED: biochemicalReaction25375
CONTROLLER: phys-ent-participant25386
NAME: XYLULOSE KINASE
XREF: unificationXref25383

biochemicalReaction25375
type: biochemicalReaction
EC-NUMBER: 2.7.1.17
LEFT: phys-ent-participant22039
LEFT: phys-ent-participant20931
NAME: Xylulokinase
RIGHT: phys-ent-participant22242
RIGHT: phys-ent-participant20977
SYNONYMS: Xylulose kinase
XREF: unificationXref25376

phys-ent-participant22039
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22034
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22034
type: smallMolecule
MOLECULAR-WEIGHT: 150.131
NAME: xylulose
STRUCTURE: chemicalStructure22038
SYNONYMS: D-xylulose
SYNONYMS: D-threo-pentulose
XREF: unificationXref22037
XREF: unificationXref22036
XREF: unificationXref22035

chemicalStructure22038
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="D-XYLULOSE-atom1" elementType="O" x2="0.20868" y2="-0.99666"/> <atom id="D-XYLULOSE-atom2" elementType="O" x2="0.20868" y2="1.0"/> <atom id="D-XYLULOSE-atom3" elementType="C" x2="-0.39566" y2="0.00167"/> <atom id="D-XYLULOSE-atom4" elementType="O" x2="0.20868" y2="0.5025"/> <atom id="D-XYLULOSE-atom5" elementType="O" x2="0.20868" y2="-0.5025"/> <atom id="D-XYLULOSE-atom6" elementType="C" x2="-0.39566" y2="-0.5025"/> <atom id="D-XYLULOSE-atom7" elementType="C" x2="-0.39566" y2="1.0"/> <atom id="D-XYLULOSE-atom8" elementType="C" x2="-0.39566" y2="-0.99666"/> <atom id="D-XYLULOSE-atom9" elementType="C" x2="-0.39566" y2="0.5025"/> <atom id="D-XYLULOSE-atom10" elementType="O" x2="-1.0" y2="0.00167"/> <bond id="D-XYLULOSE-bond1" atomRefs="D-XYLULOSE-atom10 D-XYLULOSE-atom3" order="1"/> <bond id="D-XYLULOSE-bond2" atomRefs="D-XYLULOSE-atom9 D-XYLULOSE-atom3" order="1"/> <bond id="D-XYLULOSE-bond3" atomRefs="D-XYLULOSE-atom8 D-XYLULOSE-atom6" order="1"/> <bond id="D-XYLULOSE-bond4" atomRefs="D-XYLULOSE-atom7 D-XYLULOSE-atom9" order="1"/> <bond id="D-XYLULOSE-bond5" atomRefs="D-XYLULOSE-atom6 D-XYLULOSE-atom3" order="1"/> <bond id="D-XYLULOSE-bond6" atomRefs="D-XYLULOSE-atom5 D-XYLULOSE-atom6" order="2"/> <bond id="D-XYLULOSE-bond7" atomRefs="D-XYLULOSE-atom4 D-XYLULOSE-atom9" order="1"/> <bond id="D-XYLULOSE-bond8" atomRefs="D-XYLULOSE-atom2 D-XYLULOSE-atom7" order="1"/> <bond id="D-XYLULOSE-bond9" atomRefs="D-XYLULOSE-atom1 D-XYLULOSE-atom8" order="1"/> <formula concise="C 5 H 10 O 5" formalCharge="0"/> 150.131 C(O)C(O)C(O)C(=O)CO

unificationXref22037
type: unificationXref
DB: CapCyc
ID: D-XYLULOSE

unificationXref22036
type: unificationXref
DB: CAS
ID: 551-84-8

unificationXref22035
type: unificationXref
DB: LIGAND
ID: C00310

unificationXref25376
type: unificationXref
DB: CapCyc
ID: XYLULOKIN-RXN

unificationXref25383
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-192

catalysis25377
type: catalysis
CONTROLLED: biochemicalReaction25375
CONTROLLER: phys-ent-participant25381
NAME: XYLULOSE KINASE
XREF: unificationXref25378

unificationXref25378
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-447

catalysis25354
type: catalysis
CONTROLLED: biochemicalReaction25346
CONTROLLER: phys-ent-participant25358
NAME: ASPARTATE KINASE
XREF: unificationXref25355

biochemicalReaction25346
type: biochemicalReaction
EC-NUMBER: 2.7.2.4
LEFT: phys-ent-participant21246
LEFT: phys-ent-participant20931
NAME: Aspartate kinase
RIGHT: phys-ent-participant25353
RIGHT: phys-ent-participant20977
SYNONYMS: Aspartokinase
XREF: unificationXref25347

phys-ent-participant25353
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25348
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25348
type: smallMolecule
MOLECULAR-WEIGHT: 213.083
NAME: L-aspartyl-4-phosphate
STRUCTURE: chemicalStructure25352
SYNONYMS: 4-phospho-L-aspartate
SYNONYMS: L-4-aspartyl phosphate
SYNONYMS: L-β-aspartyl-P
SYNONYMS: L-β-aspartyl-phosphate
SYNONYMS: L-aspartyl-4-P
SYNONYMS: L-aspartyl-β-phosphate
XREF: unificationXref25351
XREF: unificationXref25350
XREF: unificationXref25349

chemicalStructure25352
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-BETA-ASPARTYL-P-atom1" elementType="O" x2="-0.12439" y2="-0.20517"/> <atom id="L-BETA-ASPARTYL-P-atom2" elementType="O" x2="0.73506" y2="-1.0"/> <atom id="L-BETA-ASPARTYL-P-atom3" elementType="O" x2="0.99677" y2="-0.52504"/> <atom id="L-BETA-ASPARTYL-P-atom4" elementType="P" x2="-0.68982" y2="-0.67044"/> <atom id="L-BETA-ASPARTYL-P-atom5" elementType="C" x2="0.44103" y2="-0.51535"/> <atom id="L-BETA-ASPARTYL-P-atom6" elementType="C" x2="0.15994" y2="-0.67044"/> <atom id="L-BETA-ASPARTYL-P-atom7" elementType="O" x2="-0.40872" y2="-0.67044"/> <atom id="L-BETA-ASPARTYL-P-atom8" elementType="O" x2="-1.0" y2="-0.67044"/> <atom id="L-BETA-ASPARTYL-P-atom9" elementType="O" x2="-0.68982" y2="-0.36026"/> <atom id="L-BETA-ASPARTYL-P-atom10" elementType="C" x2="-0.12439" y2="-0.51535"/> <atom id="L-BETA-ASPARTYL-P-atom11" elementType="N" x2="0.44103" y2="-0.20517"/> <atom id="L-BETA-ASPARTYL-P-atom12" elementType="O" x2="-0.68982" y2="-0.98061"/> <atom id="L-BETA-ASPARTYL-P-atom13" elementType="C" x2="0.73506" y2="-0.68982"/> <bond id="L-BETA-ASPARTYL-P-bond1" atomRefs="L-BETA-ASPARTYL-P-atom13 L-BETA-ASPARTYL-P-atom5" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond2" atomRefs="L-BETA-ASPARTYL-P-atom12 L-BETA-ASPARTYL-P-atom4" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond3" atomRefs="L-BETA-ASPARTYL-P-atom11 L-BETA-ASPARTYL-P-atom5" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond4" atomRefs="L-BETA-ASPARTYL-P-atom10 L-BETA-ASPARTYL-P-atom7" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond5" atomRefs="L-BETA-ASPARTYL-P-atom9 L-BETA-ASPARTYL-P-atom4" order="2"/> <bond id="L-BETA-ASPARTYL-P-bond6" atomRefs="L-BETA-ASPARTYL-P-atom8 L-BETA-ASPARTYL-P-atom4" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond7" atomRefs="L-BETA-ASPARTYL-P-atom7 L-BETA-ASPARTYL-P-atom4" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond8" atomRefs="L-BETA-ASPARTYL-P-atom6 L-BETA-ASPARTYL-P-atom10" order="1"/> <bond id="L-BETA-ASPARTYL-P-bond9" atomRefs="L-BETA-ASPARTYL-P-atom5 L-BETA-ASPARTYL-P-atom6" order="1"/…

unificationXref25351
type: unificationXref
DB: CapCyc
ID: L-BETA-ASPARTYL-P

unificationXref25350
type: unificationXref
DB: CAS
ID: 22138-53-0

unificationXref25349
type: unificationXref
DB: LIGAND
ID: C03082

unificationXref25347
type: unificationXref
DB: CapCyc
ID: ASPARTATEKIN-RXN

phys-ent-participant25358
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25356
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25356
type: protein
NAME: ASPARTATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25357

unificationXref25357
type: unificationXref
DB: CapCyc
ID: SGNU203971-MONOMER

unificationXref25355
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-653

catalysis25328
type: catalysis
CONTROLLED: biochemicalReaction25315
CONTROLLER: phys-ent-participant25332
NAME: PHOSPHOGLYCERATE KINASE
XREF: unificationXref25329

biochemicalReaction25315
type: biochemicalReaction
EC-NUMBER: 2.7.2.3
LEFT: phys-ent-participant21917
LEFT: phys-ent-participant20931
NAME: Phosphoglycerate kinase
RIGHT: phys-ent-participant25322
RIGHT: phys-ent-participant20977
SYNONYMS: phosphoglycerate phosphorylation
XREF: unificationXref25316

unificationXref25316
type: unificationXref
DB: CapCyc
ID: PHOSGLYPHOS-RXN

phys-ent-participant25332
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25330
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25330
type: protein
NAME: PHOSPHOGLYCERATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25331

unificationXref25331
type: unificationXref
DB: CapCyc
ID: SGNU196315-MONOMER

unificationXref25329
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-38

catalysis25323
type: catalysis
CONTROLLED: biochemicalReaction25315
CONTROLLER: phys-ent-participant25327
NAME: PHOSPHOGLYCERATE KINASE
XREF: unificationXref25324

phys-ent-participant25327
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25325
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25325
type: protein
NAME: PHOSPHOGLYCERATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25326

unificationXref25326
type: unificationXref
DB: CapCyc
ID: SGNU197159-MONOMER

unificationXref25324
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-148

catalysis25310
type: catalysis
CONTROLLED: biochemicalReaction25293
CONTROLLER: phys-ent-participant25314
NAME: ADENYLATE KINASE
XREF: unificationXref25311

biochemicalReaction25293
type: biochemicalReaction
EC-NUMBER: 2.7.4.3
LEFT: phys-ent-participant21115
LEFT: phys-ent-participant20931
NAME: Adenylate kinase
RIGHT: phys-ent-participant20977
SYNONYMS: Adenylokinase
SYNONYMS: Adenylic kinase
SYNONYMS: Myokinase
XREF: unificationXref25294

unificationXref25294
type: unificationXref
DB: CapCyc
ID: ADENYL-KIN-RXN

phys-ent-participant25314
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25312
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25312
type: protein
NAME: ADENYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25313

unificationXref25313
type: unificationXref
DB: CapCyc
ID: SGNU197835-MONOMER

unificationXref25311
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-229

catalysis25305
type: catalysis
CONTROLLED: biochemicalReaction25293
CONTROLLER: phys-ent-participant25309
NAME: ADENYLATE KINASE
XREF: unificationXref25306

phys-ent-participant25309
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25307
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25307
type: protein
NAME: ADENYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25308

unificationXref25308
type: unificationXref
DB: CapCyc
ID: SGNU198089-MONOMER

unificationXref25306
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-257

catalysis25300
type: catalysis
CONTROLLED: biochemicalReaction25293
CONTROLLER: phys-ent-participant25304
NAME: ADENYLATE KINASE
XREF: unificationXref25301

phys-ent-participant25304
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25302
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25302
type: protein
NAME: ADENYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25303

unificationXref25303
type: unificationXref
DB: CapCyc
ID: SGNU201113-MONOMER

unificationXref25301
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-471

catalysis25295
type: catalysis
CONTROLLED: biochemicalReaction25293
CONTROLLER: phys-ent-participant25299
NAME: ADENYLATE KINASE
XREF: unificationXref25296

phys-ent-participant25299
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25297
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25297
type: protein
NAME: ADENYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25298

unificationXref25298
type: unificationXref
DB: CapCyc
ID: SGNU205257-MONOMER

unificationXref25296
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-715

catalysis25291
type: catalysis
CONTROLLED: biochemicalReaction25287
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25292

biochemicalReaction25287
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25286
LEFT: phys-ent-participant20931
NAME: CDPKIN-RXN
RIGHT: phys-ent-participant21233
RIGHT: phys-ent-participant20977
XREF: unificationXref25288

phys-ent-participant21233
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21228
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21228
type: smallMolecule
MOLECULAR-WEIGHT: 483.158
NAME: CTP
STRUCTURE: chemicalStructure21232
SYNONYMS: cytidine-triphosphate
SYNONYMS: cytidine-5'-triphosphate
XREF: unificationXref21231
XREF: unificationXref21230
XREF: unificationXref21229

chemicalStructure21232
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CTP-atom1" elementType="N" x2="8.5918" y2="-5.0505"/> <atom id="CTP-atom2" elementType="O" x2="7.167" y2="-2.5808"/> <atom id="CTP-atom3" elementType="O" x2="0.8529" y2="-2.0106"/> <atom id="CTP-atom4" elementType="O" x2="4.1382" y2="-1.9811"/> <atom id="CTP-atom5" elementType="O" x2="2.4961" y2="-1.9811"/> <atom id="CTP-atom6" elementType="O" x2="6.1144" y2="-0.0013"/> <atom id="CTP-atom7" elementType="O" x2="7.907" y2="0.0"/> <atom id="CTP-atom8" elementType="O" x2="0.0" y2="-1.1664"/> <atom id="CTP-atom9" elementType="O" x2="0.8244" y2="-0.3334"/> <atom id="CTP-atom10" elementType="O" x2="4.1357" y2="-0.3399"/> <atom id="CTP-atom11" elementType="O" x2="2.4961" y2="-0.3399"/> <atom id="CTP-atom12" elementType="C" x2="9.3138" y2="-3.8196"/> <atom id="CTP-atom13" elementType="C" x2="9.3138" y2="-2.9898"/> <atom id="CTP-atom14" elementType="C" x2="5.5707" y2="-1.7052"/> <atom id="CTP-atom15" elementType="N" x2="7.8834" y2="-3.8196"/> <atom id="CTP-atom16" elementType="O" x2="4.9587" y2="-1.1587"/> <atom id="CTP-atom17" elementType="O" x2="7.0093" y2="-1.9263"/> <atom id="CTP-atom18" elementType="O" x2="1.6773" y2="-1.1578"/> <atom id="CTP-atom19" elementType="O" x2="3.3167" y2="-1.1605"/> <atom id="CTP-atom20" elementType="C" x2="7.8834" y2="-2.9898"/> <atom id="CTP-atom21" elementType="C" x2="8.594" y2="-4.2299"/> <atom id="CTP-atom22" elementType="C" x2="6.599" y2="-0.6634"/> <atom id="CTP-atom23" elementType="C" x2="7.4241" y2="-0.6634"/> <atom id="CTP-atom24" elementType="C" x2="6.35" y2="-1.4486"/> <atom id="CTP-atom25" elementType="C" x2="7.6778" y2="-1.4486"/> <atom id="CTP-atom26" elementType="N" x2="8.594" y2="-2.5705"/> <atom id="CTP-atom27" elementType="P" x2="0.8387" y2="-1.172"/> <atom id="CTP-atom28" elementType="P" x2="4.1373" y2="-1.1605"/> <atom id="CTP-atom29" elementType="P" x2="2.4961" y2="-1.1605"/> <bond id="CTP-bond1" atomRefs="CTP-atom25 CTP-atom26" order="1"/> <bond id="CTP-bond2" atomRefs="CTP-atom23 CTP-atom25" order="1"/> <bond i…

unificationXref21231
type: unificationXref
DB: CapCyc
ID: CTP

unificationXref21230
type: unificationXref
DB: CAS
ID: 65-47-4

unificationXref21229
type: unificationXref
DB: LIGAND
ID: C00063

unificationXref25288
type: unificationXref
DB: CapCyc
ID: CDPKIN-RXN

phys-ent-participant25144
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25142
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25142
type: protein
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25143

unificationXref25143
type: unificationXref
DB: CapCyc
ID: SGNU196266-MONOMER

unificationXref25292
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-30

catalysis25289
type: catalysis
CONTROLLED: biochemicalReaction25287
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25290

phys-ent-participant25139
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25137
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25137
type: protein
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25138

unificationXref25138
type: unificationXref
DB: CapCyc
ID: SGNU196698-MONOMER

unificationXref25290
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-94

catalysis25277
type: catalysis
CONTROLLED: biochemicalReaction25261
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25278

biochemicalReaction25261
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25268
LEFT: phys-ent-participant20931
NAME: DADPKIN-RXN
RIGHT: phys-ent-participant25274
RIGHT: phys-ent-participant20977
XREF: unificationXref25262

phys-ent-participant25274
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25269
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25269
type: smallMolecule
MOLECULAR-WEIGHT: 491.184
NAME: dATP
STRUCTURE: chemicalStructure25273
SYNONYMS: 2'-deoxyadenosine triphosphate
SYNONYMS: deoxy-ATP
SYNONYMS: deoxyadenosine-triphosphate
SYNONYMS: 2'-deoxyadenosine-5'-triphosphate
XREF: unificationXref25272
XREF: unificationXref25271
XREF: unificationXref25270

chemicalStructure25273
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DATP-atom1" elementType="O" x2="5.313" y2="-3.3049"/> <atom id="DATP-atom2" elementType="O" x2="3.6711" y2="-3.3049"/> <atom id="DATP-atom3" elementType="O" x2="7.2891" y2="-1.3253"/> <atom id="DATP-atom4" elementType="O" x2="5.3105" y2="-1.6639"/> <atom id="DATP-atom5" elementType="O" x2="3.6711" y2="-1.6639"/> <atom id="DATP-atom6" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="DATP-atom7" elementType="C" x2="6.7454" y2="-3.0291"/> <atom id="DATP-atom8" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="DATP-atom9" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="DATP-atom10" elementType="O" x2="6.1335" y2="-2.4826"/> <atom id="DATP-atom11" elementType="O" x2="8.1839" y2="-3.2502"/> <atom id="DATP-atom12" elementType="O" x2="4.4916" y2="-2.4844"/> <atom id="DATP-atom13" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="DATP-atom14" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="DATP-atom15" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="DATP-atom16" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="DATP-atom17" elementType="C" x2="7.5247" y2="-2.7725"/> <atom id="DATP-atom18" elementType="C" x2="7.7737" y2="-1.9874"/> <atom id="DATP-atom19" elementType="C" x2="8.5987" y2="-1.9874"/> <atom id="DATP-atom20" elementType="C" x2="8.8524" y2="-2.7725"/> <atom id="DATP-atom21" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="DATP-atom22" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="DATP-atom23" elementType="P" x2="5.3121" y2="-2.4844"/> <atom id="DATP-atom24" elementType="P" x2="3.6711" y2="-2.4844"/> <atom id="DATP-atom25" elementType="O" x2="2.8523" y2="-2.4817"/> <atom id="DATP-atom26" elementType="O" x2="2.0273" y2="-3.3067"/> <atom id="DATP-atom27" elementType="O" x2="2.0273" y2="-1.6567"/> <atom id="DATP-atom28" elementType="O" x2="1.2042" y2="-2.479"/> <atom id="DATP-atom29" elementType="P" x2="2.0273" y2="-2.4817"/> <atom id="DATP-atom30" elementType="N" x2="7.9852" y2="-6.4411"/> <bond id="DATP-bond1" atomRefs=…

unificationXref25272
type: unificationXref
DB: CapCyc
ID: DATP

unificationXref25271
type: unificationXref
DB: CAS
ID: 1927-31-7

unificationXref25270
type: unificationXref
DB: LIGAND
ID: C00131

unificationXref25262
type: unificationXref
DB: CapCyc
ID: DADPKIN-RXN

unificationXref25278
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-26

catalysis25275
type: catalysis
CONTROLLED: biochemicalReaction25261
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25276

unificationXref25276
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-90

catalysis25259
type: catalysis
CONTROLLED: biochemicalReaction25249
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25260

biochemicalReaction25249
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25256
LEFT: phys-ent-participant20931
NAME: DCDPKIN-RXN
RIGHT: phys-ent-participant23747
RIGHT: phys-ent-participant20977
XREF: unificationXref25250

phys-ent-participant23747
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23742
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23742
type: smallMolecule
MOLECULAR-WEIGHT: 467.159
NAME: dCTP
STRUCTURE: chemicalStructure23746
SYNONYMS: 2'-deoxycytidine-5'-triphosphate
SYNONYMS: deoxycytidine-triphosphate
SYNONYMS: deoxy-CTP
XREF: unificationXref23745
XREF: unificationXref23744
XREF: unificationXref23743

chemicalStructure23746
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DCTP-atom1" elementType="N" x2="8.5912" y2="-5.0488"/> <atom id="DCTP-atom2" elementType="O" x2="7.1665" y2="-2.5793"/> <atom id="DCTP-atom3" elementType="O" x2="0.8529" y2="-2.0092"/> <atom id="DCTP-atom4" elementType="O" x2="4.1379" y2="-1.9796"/> <atom id="DCTP-atom5" elementType="O" x2="2.496" y2="-1.9796"/> <atom id="DCTP-atom6" elementType="O" x2="6.114" y2="0.0"/> <atom id="DCTP-atom7" elementType="O" x2="0.8244" y2="-0.3321"/> <atom id="DCTP-atom8" elementType="O" x2="0.0" y2="-1.165"/> <atom id="DCTP-atom9" elementType="O" x2="4.1354" y2="-0.3386"/> <atom id="DCTP-atom10" elementType="O" x2="2.496" y2="-0.3386"/> <atom id="DCTP-atom11" elementType="C" x2="9.3132" y2="-3.818"/> <atom id="DCTP-atom12" elementType="C" x2="9.3132" y2="-2.9883"/> <atom id="DCTP-atom13" elementType="C" x2="5.5703" y2="-1.7038"/> <atom id="DCTP-atom14" elementType="C" x2="7.4236" y2="-0.6621"/> <atom id="DCTP-atom15" elementType="N" x2="7.8829" y2="-3.818"/> <atom id="DCTP-atom16" elementType="O" x2="4.9585" y2="-1.1573"/> <atom id="DCTP-atom17" elementType="O" x2="7.0089" y2="-1.9249"/> <atom id="DCTP-atom18" elementType="O" x2="1.6772" y2="-1.1564"/> <atom id="DCTP-atom19" elementType="O" x2="3.3165" y2="-1.1591"/> <atom id="DCTP-atom20" elementType="C" x2="7.8829" y2="-2.9883"/> <atom id="DCTP-atom21" elementType="C" x2="8.5935" y2="-4.2283"/> <atom id="DCTP-atom22" elementType="C" x2="6.5986" y2="-0.6621"/> <atom id="DCTP-atom23" elementType="C" x2="6.3496" y2="-1.4472"/> <atom id="DCTP-atom24" elementType="C" x2="7.6773" y2="-1.4472"/> <atom id="DCTP-atom25" elementType="N" x2="8.5935" y2="-2.569"/> <atom id="DCTP-atom26" elementType="P" x2="0.8387" y2="-1.1706"/> <atom id="DCTP-atom27" elementType="P" x2="4.137" y2="-1.1591"/> <atom id="DCTP-atom28" elementType="P" x2="2.496" y2="-1.1591"/> <bond id="DCTP-bond1" atomRefs="DCTP-atom1 DCTP-atom21" order="1"/> <bond id="DCTP-bond2" atomRefs="DCTP-atom2 DCTP-atom20" order="2"/> <bond id="DCTP-bond3" atomRefs="DCTP-atom…

unificationXref23745
type: unificationXref
DB: CapCyc
ID: DCTP

unificationXref23744
type: unificationXref
DB: CAS
ID: 2056-98-6

unificationXref23743
type: unificationXref
DB: LIGAND
ID: C00458

unificationXref25250
type: unificationXref
DB: CapCyc
ID: DCDPKIN-RXN

unificationXref25260
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-28

catalysis25257
type: catalysis
CONTROLLED: biochemicalReaction25249
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25258

unificationXref25258
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-92

catalysis25247
type: catalysis
CONTROLLED: biochemicalReaction25237
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25248

biochemicalReaction25237
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25190
LEFT: phys-ent-participant20931
NAME: DGDPKIN-RXN
RIGHT: phys-ent-participant25244
RIGHT: phys-ent-participant20977
XREF: unificationXref25238

phys-ent-participant25244
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25239
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25239
type: smallMolecule
MOLECULAR-WEIGHT: 507.183
NAME: dGTP
STRUCTURE: chemicalStructure25243
SYNONYMS: 2'-deoxyguanosine-5'-triphosphate
SYNONYMS: deoxy-GTP
SYNONYMS: deoxyguanosine-triphosphate
XREF: unificationXref25242
XREF: unificationXref25241
XREF: unificationXref25240

chemicalStructure25243
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DGTP-atom1" elementType="H" x2="7.8552" y2="-7.6924"/> <atom id="DGTP-atom2" elementType="N" x2="7.8863" y2="-4.9422"/> <atom id="DGTP-atom3" elementType="O" x2="10.2285" y2="-9.0096"/> <atom id="DGTP-atom4" elementType="O" x2="1.3568" y2="-3.2661"/> <atom id="DGTP-atom5" elementType="O" x2="6.7729" y2="-3.2632"/> <atom id="DGTP-atom6" elementType="O" x2="4.0664" y2="-3.2632"/> <atom id="DGTP-atom7" elementType="O" x2="10.0303" y2="0.0"/> <atom id="DGTP-atom8" elementType="O" x2="0.0" y2="-1.9018"/> <atom id="DGTP-atom9" elementType="O" x2="1.3568" y2="-0.5463"/> <atom id="DGTP-atom10" elementType="O" x2="6.7688" y2="-0.5581"/> <atom id="DGTP-atom11" elementType="O" x2="4.0664" y2="-0.5581"/> <atom id="DGTP-atom12" elementType="C" x2="13.5131" y2="-6.2899"/> <atom id="DGTP-atom13" elementType="C" x2="9.1341" y2="-2.8085"/> <atom id="DGTP-atom14" elementType="C" x2="12.1891" y2="-1.0914"/> <atom id="DGTP-atom15" elementType="N" x2="12.7203" y2="-7.4013"/> <atom id="DGTP-atom16" elementType="N" x2="10.2323" y2="-4.9218"/> <atom id="DGTP-atom17" elementType="O" x2="8.1254" y2="-1.9077"/> <atom id="DGTP-atom18" elementType="O" x2="11.5053" y2="-3.173"/> <atom id="DGTP-atom19" elementType="O" x2="2.7167" y2="-1.9062"/> <atom id="DGTP-atom20" elementType="O" x2="5.4189" y2="-1.9107"/> <atom id="DGTP-atom21" elementType="C" x2="9.0609" y2="-5.6131"/> <atom id="DGTP-atom22" elementType="C" x2="10.2323" y2="-7.6571"/> <atom id="DGTP-atom23" elementType="C" x2="11.4186" y2="-6.9808"/> <atom id="DGTP-atom24" elementType="C" x2="11.4186" y2="-5.6131"/> <atom id="DGTP-atom25" elementType="C" x2="10.8291" y2="-1.0914"/> <atom id="DGTP-atom26" elementType="C" x2="10.4187" y2="-2.3856"/> <atom id="DGTP-atom27" elementType="C" x2="12.6073" y2="-2.3856"/> <atom id="DGTP-atom28" elementType="N" x2="9.0609" y2="-6.9808"/> <atom id="DGTP-atom29" elementType="N" x2="12.717" y2="-5.2045"/> <atom id="DGTP-atom30" elementType="P" x2="1.3568" y2="-1.9062"/> <atom id="DGTP-atom31" e…

unificationXref25242
type: unificationXref
DB: CapCyc
ID: DGTP

unificationXref25241
type: unificationXref
DB: CAS
ID: 2564-35-4

unificationXref25240
type: unificationXref
DB: LIGAND
ID: C00286

unificationXref25238
type: unificationXref
DB: CapCyc
ID: DGDPKIN-RXN

unificationXref25248
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-25

catalysis25245
type: catalysis
CONTROLLED: biochemicalReaction25237
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25246

unificationXref25246
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-89

catalysis25235
type: catalysis
CONTROLLED: biochemicalReaction25231
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25236

biochemicalReaction25231
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25225
LEFT: phys-ent-participant20931
NAME: DTDPKIN-RXN
RIGHT: phys-ent-participant25046
RIGHT: phys-ent-participant20977
XREF: unificationXref25232

phys-ent-participant25225
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25220
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25220
type: smallMolecule
MOLECULAR-WEIGHT: 402.191
NAME: dTDP
STRUCTURE: chemicalStructure25224
SYNONYMS: TDP
SYNONYMS: thymidine 5'-(trihydrogen diphosphate) (9CI)
SYNONYMS: deoxy-TDP
SYNONYMS: thymidine-5'-diphosphate
SYNONYMS: thymidine-diphosphate
XREF: unificationXref25223
XREF: unificationXref25222
XREF: unificationXref25221

chemicalStructure25224
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TDP-atom1" elementType="H" x2="9.0377" y2="-6.9763"/> <atom id="TDP-atom2" elementType="C" x2="13.8057" y2="-6.9887"/> <atom id="TDP-atom3" elementType="O" x2="11.4355" y2="-8.3441"/> <atom id="TDP-atom4" elementType="O" x2="9.0832" y2="-4.2591"/> <atom id="TDP-atom5" elementType="O" x2="1.3637" y2="-3.2791"/> <atom id="TDP-atom6" elementType="O" x2="4.0822" y2="-3.2689"/> <atom id="TDP-atom7" elementType="O" x2="7.3452" y2="0.0"/> <atom id="TDP-atom8" elementType="O" x2="0.0" y2="-1.917"/> <atom id="TDP-atom9" elementType="O" x2="1.3595" y2="-0.5548"/> <atom id="TDP-atom10" elementType="O" x2="4.0781" y2="-0.5591"/> <atom id="TDP-atom11" elementType="C" x2="12.6278" y2="-4.9344"/> <atom id="TDP-atom12" elementType="C" x2="6.4475" y2="-2.8134"/> <atom id="TDP-atom13" elementType="C" x2="9.5077" y2="-1.0932"/> <atom id="TDP-atom14" elementType="O" x2="5.437" y2="-1.911"/> <atom id="TDP-atom15" elementType="O" x2="8.8228" y2="-3.1784"/> <atom id="TDP-atom16" elementType="O" x2="2.7258" y2="-1.914"/> <atom id="TDP-atom17" elementType="C" x2="12.6278" y2="-6.3045"/> <atom id="TDP-atom18" elementType="C" x2="11.4393" y2="-6.9819"/> <atom id="TDP-atom19" elementType="C" x2="10.266" y2="-4.9344"/> <atom id="TDP-atom20" elementType="C" x2="8.1453" y2="-1.0932"/> <atom id="TDP-atom21" elementType="C" x2="7.7342" y2="-2.3897"/> <atom id="TDP-atom22" elementType="C" x2="9.9266" y2="-2.3897"/> <atom id="TDP-atom23" elementType="N" x2="10.266" y2="-6.3045"/> <atom id="TDP-atom24" elementType="N" x2="11.4393" y2="-4.2421"/> <atom id="TDP-atom25" elementType="P" x2="1.3622" y2="-1.917"/> <atom id="TDP-atom26" elementType="P" x2="4.0808" y2="-1.914"/> <bond id="TDP-bond1" atomRefs="TDP-atom22 TDP-atom24" order="1"/> <bond id="TDP-bond2" atomRefs="TDP-atom20 TDP-atom21" order="1"/> <bond id="TDP-bond3" atomRefs="TDP-atom19 TDP-atom24" order="A"/> <bond id="TDP-bond4" atomRefs="TDP-atom23 TDP-atom19" order="A"/> <bond id="TDP-bond5" atomRefs="TDP-atom18 TDP-atom23" order="A…

unificationXref25223
type: unificationXref
DB: CapCyc
ID: TDP

unificationXref25222
type: unificationXref
DB: CAS
ID: 491-97-4

unificationXref25221
type: unificationXref
DB: LIGAND
ID: C00363

phys-ent-participant25046
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25041
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25041
type: smallMolecule
MOLECULAR-WEIGHT: 482.171
NAME: dTTP
STRUCTURE: chemicalStructure25045
SYNONYMS: thymidine triphosphate
SYNONYMS: thymidine 5'-triphosphate
SYNONYMS: TTP
XREF: unificationXref25044
XREF: unificationXref25043
XREF: unificationXref25042

chemicalStructure25045
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TTP-atom1" elementType="H" x2="11.8328" y2="-7.0388"/> <atom id="TTP-atom2" elementType="C" x2="16.5907" y2="-7.0137"/> <atom id="TTP-atom3" elementType="O" x2="14.2121" y2="-8.374"/> <atom id="TTP-atom4" elementType="O" x2="11.8513" y2="-4.2743"/> <atom id="TTP-atom5" elementType="O" x2="1.3685" y2="-3.2939"/> <atom id="TTP-atom6" elementType="O" x2="6.8324" y2="-3.2806"/> <atom id="TTP-atom7" elementType="O" x2="4.1041" y2="-3.2909"/> <atom id="TTP-atom8" elementType="O" x2="10.1071" y2="0.0"/> <atom id="TTP-atom9" elementType="O" x2="0.0" y2="-1.9268"/> <atom id="TTP-atom10" elementType="O" x2="1.3644" y2="-0.5597"/> <atom id="TTP-atom11" elementType="O" x2="6.8283" y2="-0.5611"/> <atom id="TTP-atom12" elementType="O" x2="4.1" y2="-0.5568"/> <atom id="TTP-atom13" elementType="C" x2="15.4086" y2="-4.952"/> <atom id="TTP-atom14" elementType="C" x2="9.2062" y2="-2.8234"/> <atom id="TTP-atom15" elementType="C" x2="12.2773" y2="-1.0971"/> <atom id="TTP-atom16" elementType="O" x2="8.192" y2="-1.9179"/> <atom id="TTP-atom17" elementType="O" x2="11.59" y2="-3.1898"/> <atom id="TTP-atom18" elementType="O" x2="2.7356" y2="-1.9238"/> <atom id="TTP-atom19" elementType="O" x2="5.4712" y2="-1.9208"/> <atom id="TTP-atom20" elementType="C" x2="15.4086" y2="-6.3271"/> <atom id="TTP-atom21" elementType="C" x2="14.2159" y2="-7.0069"/> <atom id="TTP-atom22" elementType="C" x2="13.0384" y2="-4.952"/> <atom id="TTP-atom23" elementType="C" x2="10.9101" y2="-1.0971"/> <atom id="TTP-atom24" elementType="C" x2="10.4975" y2="-2.3982"/> <atom id="TTP-atom25" elementType="C" x2="12.6977" y2="-2.3982"/> <atom id="TTP-atom26" elementType="N" x2="13.0384" y2="-6.3271"/> <atom id="TTP-atom27" elementType="N" x2="14.2159" y2="-4.2573"/> <atom id="TTP-atom28" elementType="P" x2="1.3671" y2="-1.9268"/> <atom id="TTP-atom29" elementType="P" x2="6.831" y2="-1.9208"/> <atom id="TTP-atom30" elementType="P" x2="4.1027" y2="-1.9238"/> <bond id="TTP-bond1" atomRefs="TTP-atom25 TTP-atom27" order=…

unificationXref25044
type: unificationXref
DB: CapCyc
ID: TTP

unificationXref25043
type: unificationXref
DB: CAS
ID: 365-08-2

unificationXref25042
type: unificationXref
DB: LIGAND
ID: C00459

unificationXref25232
type: unificationXref
DB: CapCyc
ID: DTDPKIN-RXN

unificationXref25236
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-27

catalysis25233
type: catalysis
CONTROLLED: biochemicalReaction25231
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25234

unificationXref25234
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-91

catalysis25226
type: catalysis
CONTROLLED: biochemicalReaction25212
CONTROLLER: phys-ent-participant25230
NAME: THYMIDYLATE KINASE
XREF: unificationXref25227

biochemicalReaction25212
type: biochemicalReaction
EC-NUMBER: 2.7.4.9
LEFT: phys-ent-participant25219
LEFT: phys-ent-participant20931
NAME: Thymidylate kinase
RIGHT: phys-ent-participant25225
RIGHT: phys-ent-participant20977
SYNONYMS: THYMIDYLATE KINASE HOMOLOGUE
SYNONYMS: TMPK
SYNONYMS: Thymidylic acid kinase
SYNONYMS: dTMP kinase
XREF: unificationXref25213

phys-ent-participant25219
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25214
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25214
type: smallMolecule
MOLECULAR-WEIGHT: 322.211
NAME: dTMP
STRUCTURE: chemicalStructure25218
SYNONYMS: T
SYNONYMS: thymidylic acid
SYNONYMS: thymidine monophosphate
SYNONYMS: deoxythymidylate
SYNONYMS: TMP
SYNONYMS: thymidine-5'-monophosphate
SYNONYMS: thymidine-phosphate
SYNONYMS: thymidine-5'-phosphate
SYNONYMS: Deoxythymidine 5'-phosphate
SYNONYMS: 5'-Thymidylic acid
SYNONYMS: Deoxythymidylic acid
SYNONYMS: Thymidylate
XREF: unificationXref25217
XREF: unificationXref25216
XREF: unificationXref25215

chemicalStructure25218
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TMP-atom1" elementType="H" x2="5.566" y2="-7.2055"/> <atom id="TMP-atom2" elementType="C" x2="10.3196" y2="-7.1775"/> <atom id="TMP-atom3" elementType="O" x2="7.9463" y2="-8.5347"/> <atom id="TMP-atom4" elementType="O" x2="5.5904" y2="-4.444"/> <atom id="TMP-atom5" elementType="O" x2="1.3577" y2="-0.5612"/> <atom id="TMP-atom6" elementType="O" x2="4.6381" y2="0.0"/> <atom id="TMP-atom7" elementType="O" x2="1.3619" y2="-3.282"/> <atom id="TMP-atom8" elementType="O" x2="0.0" y2="-1.9216"/> <atom id="TMP-atom9" elementType="C" x2="9.1433" y2="-5.1186"/> <atom id="TMP-atom10" elementType="C" x2="3.7368" y2="-2.8248"/> <atom id="TMP-atom11" elementType="C" x2="6.8095" y2="-1.0978"/> <atom id="TMP-atom12" elementType="O" x2="2.7221" y2="-1.9187"/> <atom id="TMP-atom13" elementType="O" x2="6.1219" y2="-3.1914"/> <atom id="TMP-atom14" elementType="C" x2="9.1433" y2="-6.4941"/> <atom id="TMP-atom15" elementType="C" x2="7.9501" y2="-7.1743"/> <atom id="TMP-atom16" elementType="C" x2="6.7718" y2="-5.1186"/> <atom id="TMP-atom17" elementType="C" x2="5.4417" y2="-1.0978"/> <atom id="TMP-atom18" elementType="C" x2="5.0288" y2="-2.3992"/> <atom id="TMP-atom19" elementType="C" x2="7.23" y2="-2.3992"/> <atom id="TMP-atom20" elementType="N" x2="6.7718" y2="-6.4941"/> <atom id="TMP-atom21" elementType="N" x2="7.9475" y2="-4.4203"/> <atom id="TMP-atom22" elementType="P" x2="1.3604" y2="-1.9216"/> <bond id="TMP-bond1" atomRefs="TMP-atom19 TMP-atom21" order="1"/> <bond id="TMP-bond2" atomRefs="TMP-atom17 TMP-atom18" order="1"/> <bond id="TMP-bond3" atomRefs="TMP-atom16 TMP-atom21" order="A"/> <bond id="TMP-bond4" atomRefs="TMP-atom20 TMP-atom16" order="A"/> <bond id="TMP-bond5" atomRefs="TMP-atom15 TMP-atom20" order="A"/> <bond id="TMP-bond6" atomRefs="TMP-atom14 TMP-atom15" order="A"/> <bond id="TMP-bond7" atomRefs="TMP-atom13 TMP-atom19" order="1"/> <bond id="TMP-bond8" atomRefs="TMP-atom13 TMP-atom18" order="1"/> <bond id="TMP-bond9" atomRefs="TMP-atom12 TMP-atom22" order="1…

unificationXref25217
type: unificationXref
DB: CapCyc
ID: TMP

unificationXref25216
type: unificationXref
DB: CAS
ID: 365-07-1

unificationXref25215
type: unificationXref
DB: LIGAND
ID: C00364

unificationXref25213
type: unificationXref
DB: CapCyc
ID: DTMPKI-RXN

phys-ent-participant25230
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25228
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25228
type: protein
NAME: THYMIDYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25229

unificationXref25229
type: unificationXref
DB: CapCyc
ID: SGNU201314-MONOMER

unificationXref25227
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-493

catalysis25210
type: catalysis
CONTROLLED: biochemicalReaction25201
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25211

biochemicalReaction25201
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25207
LEFT: phys-ent-participant20931
NAME: DUDPKIN-RXN
RIGHT: phys-ent-participant23683
RIGHT: phys-ent-participant20977
XREF: unificationXref25202

phys-ent-participant23683
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23678
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23678
type: smallMolecule
MOLECULAR-WEIGHT: 468.144
NAME: dUTP
STRUCTURE: chemicalStructure23682
SYNONYMS: deoxy-UTP
SYNONYMS: 2'-deoxyuridine-5'-triphosphate
SYNONYMS: deoxyuridine-triphosphate
XREF: unificationXref23681
XREF: unificationXref23680
XREF: unificationXref23679

chemicalStructure23682
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DUTP-atom1" elementType="H" x2="11.8408" y2="-7.018"/> <atom id="DUTP-atom2" elementType="O" x2="14.2163" y2="-8.3393"/> <atom id="DUTP-atom3" elementType="O" x2="11.8632" y2="-4.2602"/> <atom id="DUTP-atom4" elementType="O" x2="1.4325" y2="-3.3046"/> <atom id="DUTP-atom5" elementType="O" x2="6.8607" y2="-3.2697"/> <atom id="DUTP-atom6" elementType="O" x2="4.1487" y2="-3.2697"/> <atom id="DUTP-atom7" elementType="O" x2="10.1247" y2="0.0"/> <atom id="DUTP-atom8" elementType="O" x2="0.0" y2="-1.9047"/> <atom id="DUTP-atom9" elementType="O" x2="1.413" y2="-0.5087"/> <atom id="DUTP-atom10" elementType="O" x2="6.8566" y2="-0.5592"/> <atom id="DUTP-atom11" elementType="O" x2="4.1487" y2="-0.5592"/> <atom id="DUTP-atom12" elementType="C" x2="15.4089" y2="-6.3062"/> <atom id="DUTP-atom13" elementType="C" x2="15.4089" y2="-4.9358"/> <atom id="DUTP-atom14" elementType="C" x2="9.2266" y2="-2.8142"/> <atom id="DUTP-atom15" elementType="C" x2="12.2878" y2="-1.0936"/> <atom id="DUTP-atom16" elementType="O" x2="8.216" y2="-1.9115"/> <atom id="DUTP-atom17" elementType="O" x2="11.6028" y2="-3.1793"/> <atom id="DUTP-atom18" elementType="O" x2="2.7964" y2="-1.91"/> <atom id="DUTP-atom19" elementType="O" x2="5.504" y2="-1.9145"/> <atom id="DUTP-atom20" elementType="C" x2="14.22" y2="-6.9839"/> <atom id="DUTP-atom21" elementType="C" x2="13.0464" y2="-4.9358"/> <atom id="DUTP-atom22" elementType="C" x2="10.9252" y2="-1.0936"/> <atom id="DUTP-atom23" elementType="C" x2="10.5139" y2="-2.3903"/> <atom id="DUTP-atom24" elementType="C" x2="12.7068" y2="-2.3903"/> <atom id="DUTP-atom25" elementType="N" x2="13.0464" y2="-6.3062"/> <atom id="DUTP-atom26" elementType="N" x2="14.22" y2="-4.2433"/> <atom id="DUTP-atom27" elementType="P" x2="1.3982" y2="-1.9068"/> <atom id="DUTP-atom28" elementType="P" x2="6.8592" y2="-1.9145"/> <atom id="DUTP-atom29" elementType="P" x2="4.1487" y2="-1.9145"/> <bond id="DUTP-bond1" atomRefs="DUTP-atom24 DUTP-atom26" order="1"/> <bond id="DUTP-bond2" atomRe…

unificationXref23681
type: unificationXref
DB: CapCyc
ID: DUTP

unificationXref23680
type: unificationXref
DB: CAS
ID: 1173-82-6

unificationXref23679
type: unificationXref
DB: LIGAND
ID: C00460

unificationXref25202
type: unificationXref
DB: CapCyc
ID: DUDPKIN-RXN

unificationXref25211
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-29

catalysis25208
type: catalysis
CONTROLLED: biochemicalReaction25201
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25209

unificationXref25209
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-93

catalysis25199
type: catalysis
CONTROLLED: biochemicalReaction25195
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25200

biochemicalReaction25195
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant21290
LEFT: phys-ent-participant20931
NAME: GDPKIN-RXN
RIGHT: phys-ent-participant21278
RIGHT: phys-ent-participant20977
XREF: unificationXref25196

unificationXref25196
type: unificationXref
DB: CapCyc
ID: GDPKIN-RXN

unificationXref25200
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-24

catalysis25197
type: catalysis
CONTROLLED: biochemicalReaction25195
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25198

unificationXref25198
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-88

catalysis25193
type: catalysis
CONTROLLED: biochemicalReaction25177
CONTROLLER: phys-ent-participant25176
NAME: GUANYLATE KINASE
XREF: unificationXref25194

biochemicalReaction25177
type: biochemicalReaction
EC-NUMBER: 2.7.4.12
LEFT: phys-ent-participant20931
LEFT: phys-ent-participant25184
NAME: T2-induced deoxynucleotide kinase
RIGHT: phys-ent-participant20977
RIGHT: phys-ent-participant25190
XREF: unificationXref25178

phys-ent-participant25184
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25179
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25179
type: smallMolecule
MOLECULAR-WEIGHT: 347.224
NAME: dGMP
STRUCTURE: chemicalStructure25183
SYNONYMS: G
SYNONYMS: 2'-dG-5'-MP
SYNONYMS: 2'-deoxyguanosine 5'-monophosphate
SYNONYMS: guanine riboside
SYNONYMS: vernine
SYNONYMS: 2'-deoxyguanosine-5'-phosphate
SYNONYMS: deoxyguanosine-phosphate
XREF: unificationXref25182
XREF: unificationXref25181
XREF: unificationXref25180

chemicalStructure25183
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DGMP-atom1" elementType="H" x2="2.8267" y2="-7.3592"/> <atom id="DGMP-atom2" elementType="N" x2="2.8595" y2="-4.6126"/> <atom id="DGMP-atom3" elementType="O" x2="5.1985" y2="-8.6738"/> <atom id="DGMP-atom4" elementType="O" x2="1.3581" y2="-3.4836"/> <atom id="DGMP-atom5" elementType="O" x2="4.8243" y2="0.0"/> <atom id="DGMP-atom6" elementType="O" x2="1.3354" y2="-0.7898"/> <atom id="DGMP-atom7" elementType="O" x2="0.0" y2="-2.133"/> <atom id="DGMP-atom8" elementType="C" x2="8.4781" y2="-5.9581"/> <atom id="DGMP-atom9" elementType="C" x2="3.8765" y2="-2.7974"/> <atom id="DGMP-atom10" elementType="C" x2="6.9556" y2="-1.099"/> <atom id="DGMP-atom11" elementType="N" x2="7.6864" y2="-7.0679"/> <atom id="DGMP-atom12" elementType="N" x2="5.2021" y2="-4.5919"/> <atom id="DGMP-atom13" elementType="O" x2="2.7011" y2="-2.133"/> <atom id="DGMP-atom14" elementType="O" x2="6.2478" y2="-3.1756"/> <atom id="DGMP-atom15" elementType="C" x2="4.0325" y2="-5.2823"/> <atom id="DGMP-atom16" elementType="C" x2="5.2021" y2="-7.3232"/> <atom id="DGMP-atom17" elementType="C" x2="6.3867" y2="-6.6478"/> <atom id="DGMP-atom18" elementType="C" x2="6.3867" y2="-5.2823"/> <atom id="DGMP-atom19" elementType="C" x2="5.5998" y2="-1.099"/> <atom id="DGMP-atom20" elementType="C" x2="5.1633" y2="-2.3879"/> <atom id="DGMP-atom21" elementType="C" x2="7.3645" y2="-2.3678"/> <atom id="DGMP-atom22" elementType="N" x2="4.0325" y2="-6.6478"/> <atom id="DGMP-atom23" elementType="N" x2="7.683" y2="-4.8698"/> <atom id="DGMP-atom24" elementType="P" x2="1.3506" y2="-2.133"/> <bond id="DGMP-bond1" atomRefs="DGMP-atom21 DGMP-atom23" order="1"/> <bond id="DGMP-bond2" atomRefs="DGMP-atom19 DGMP-atom20" order="1"/> <bond id="DGMP-bond3" atomRefs="DGMP-atom18 DGMP-atom23" order="A"/> <bond id="DGMP-bond4" atomRefs="DGMP-atom17 DGMP-atom18" order="A"/> <bond id="DGMP-bond5" atomRefs="DGMP-atom22 DGMP-atom16" order="A"/> <bond id="DGMP-bond6" atomRefs="DGMP-atom16 DGMP-atom17" order="A"/> <bond id="DGMP-bond7" at…

unificationXref25182
type: unificationXref
DB: CapCyc
ID: DGMP

unificationXref25181
type: unificationXref
DB: CAS
ID: 902-04-5

unificationXref25180
type: unificationXref
DB: LIGAND
ID: C00362

unificationXref25178
type: unificationXref
DB: CapCyc
ID: GMKALT-RXN

phys-ent-participant25176
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25174
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25174
type: protein
NAME: GUANYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25175

unificationXref25175
type: unificationXref
DB: CapCyc
ID: SGNU197554-MONOMER

unificationXref25194
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-197

catalysis25191
type: catalysis
CONTROLLED: biochemicalReaction25177
CONTROLLER: phys-ent-participant25171
NAME: GUANYLATE KINASE
XREF: unificationXref25192

phys-ent-participant25171
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25169
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25169
type: protein
NAME: GUANYLATE KINASE
ORGANISM: bioSource20982
XREF: unificationXref25170

unificationXref25170
type: unificationXref
DB: CapCyc
ID: SGNU203360-MONOMER

unificationXref25192
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-613

catalysis25172
type: catalysis
CONTROLLED: biochemicalReaction25165
CONTROLLER: phys-ent-participant25176
NAME: GUANYLATE KINASE
XREF: unificationXref25173

biochemicalReaction25165
type: biochemicalReaction
EC-NUMBER: 2.7.4.8
LEFT: phys-ent-participant21101
LEFT: phys-ent-participant20931
NAME: Guanylate kinase
RIGHT: phys-ent-participant21290
RIGHT: phys-ent-participant20977
SYNONYMS: Guanosine monophosphate kinase
SYNONYMS: GMP kinase
SYNONYMS: Deoxyguanylate kinase
XREF: unificationXref25166

phys-ent-participant21101
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21096
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21096
type: smallMolecule
MOLECULAR-WEIGHT: 363.223
NAME: GMP
STRUCTURE: chemicalStructure21100
SYNONYMS: guanylate
SYNONYMS: G
SYNONYMS: guanylic acid
SYNONYMS: guanosine-phosphate
SYNONYMS: guanosine-5'-phosphate
SYNONYMS: guanosine-monophosphate
SYNONYMS: guanosine monophosphate
SYNONYMS: guanosine-5'-monophosphate
XREF: unificationXref21099
XREF: unificationXref21098
XREF: unificationXref21097

chemicalStructure21100
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GMP-atom1" elementType="N" x2="6.5643" y2="-3.9691"/> <atom id="GMP-atom2" elementType="O" x2="7.9852" y2="-6.4366"/> <atom id="GMP-atom3" elementType="O" x2="5.8184" y2="-3.0192"/> <atom id="GMP-atom4" elementType="O" x2="7.7945" y2="-1.0396"/> <atom id="GMP-atom5" elementType="O" x2="5.8159" y2="-1.3782"/> <atom id="GMP-atom6" elementType="C" x2="9.9778" y2="-4.7867"/> <atom id="GMP-atom7" elementType="C" x2="7.2508" y2="-2.7434"/> <atom id="GMP-atom8" elementType="N" x2="9.4969" y2="-5.4609"/> <atom id="GMP-atom9" elementType="N" x2="7.9875" y2="-3.9567"/> <atom id="GMP-atom10" elementType="O" x2="6.6389" y2="-2.1969"/> <atom id="GMP-atom11" elementType="O" x2="8.6893" y2="-2.9645"/> <atom id="GMP-atom12" elementType="C" x2="7.2769" y2="-4.3761"/> <atom id="GMP-atom13" elementType="C" x2="7.9875" y2="-5.6161"/> <atom id="GMP-atom14" elementType="C" x2="8.7072" y2="-5.2058"/> <atom id="GMP-atom15" elementType="C" x2="8.7072" y2="-4.3761"/> <atom id="GMP-atom16" elementType="C" x2="8.0301" y2="-2.4868"/> <atom id="GMP-atom17" elementType="C" x2="8.2791" y2="-1.7017"/> <atom id="GMP-atom18" elementType="C" x2="9.1041" y2="-1.7017"/> <atom id="GMP-atom19" elementType="C" x2="9.3578" y2="-2.4868"/> <atom id="GMP-atom20" elementType="N" x2="7.2769" y2="-5.2058"/> <atom id="GMP-atom21" elementType="N" x2="9.4949" y2="-4.1282"/> <atom id="GMP-atom22" elementType="P" x2="5.8175" y2="-2.1987"/> <atom id="GMP-atom23" elementType="O" x2="4.9925" y2="-2.1999"/> <atom id="GMP-atom24" elementType="O" x2="9.5896" y2="-1.0347"/> <atom id="GMP-atom25" elementType="H" x2="6.5624" y2="-5.6183"/> <bond id="GMP-bond1" atomRefs="GMP-atom20 GMP-atom25" order="1"/> <bond id="GMP-bond2" atomRefs="GMP-atom19 GMP-atom21" order="1"/> <bond id="GMP-bond3" atomRefs="GMP-atom18 GMP-atom19" order="1"/> <bond id="GMP-bond4" atomRefs="GMP-atom17 GMP-atom18" order="1"/> <bond id="GMP-bond5" atomRefs="GMP-atom16 GMP-atom17" order="1"/> <bond id="GMP-bond6" atomRefs="GMP-atom15 GMP-atom21" …

unificationXref21099
type: unificationXref
DB: CapCyc
ID: GMP

unificationXref21098
type: unificationXref
DB: CAS
ID: 85-32-5

unificationXref21097
type: unificationXref
DB: LIGAND
ID: C00144

unificationXref25166
type: unificationXref
DB: CapCyc
ID: GUANYL-KIN-RXN

unificationXref25173
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-198

catalysis25167
type: catalysis
CONTROLLED: biochemicalReaction25165
CONTROLLER: phys-ent-participant25171
NAME: GUANYLATE KINASE
XREF: unificationXref25168

unificationXref25168
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-614

catalysis25163
type: catalysis
CONTROLLED: biochemicalReaction25152
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25164

biochemicalReaction25152
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25156
LEFT: phys-ent-participant20931
NAME: Nucleoside-diphosphate kinase
RIGHT: phys-ent-participant25160
RIGHT: phys-ent-participant20977
SYNONYMS: NDK
SYNONYMS: Nucleoside diphosphokinase
SYNONYMS: Nucleoside 5'-diphosphate phosphotransferase
XREF: unificationXref25153

phys-ent-participant25160
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25157
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25157
type: smallMolecule
NAME: a ribonucleoside triphosphate
STRUCTURE: chemicalStructure25159
SYNONYMS: nucleoside triphosphate
SYNONYMS: ribonucleoside triphosphate
XREF: unificationXref25158

chemicalStructure25159
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="Ribonucleoside-Triphosphates" title="a ribonucleoside triphosphate" dictRef="dictRibonucleoside-Triphosphates"> <atomArray> <atom id="Ribonucleoside-Triphosphates-atom1" elementType="O" x2="1.4081" y2="-1.1967"/> <atom id="Ribonucleoside-Triphosphates-atom2" elementType="O" x2="7.0061" y2="-1.1913"/> <atom id="Ribonucleoside-Triphosphates-atom3" elementType="O" x2="4.2081" y2="-1.1967"/> <atom id="Ribonucleoside-Triphosphates-atom4" elementType="O" x2="13.3413" y2="0.0"/> <atom id="Ribonucleoside-Triphosphates-atom5" elementType="O" x2="10.5516" y2="-0.0541"/> <atom id="Ribonucleoside-Triphosphates-atom6" elementType="O" x2="1.4058" y2="-3.9967"/> <atom id="Ribonucleoside-Triphosphates-atom7" elementType="O" x2="0.0" y2="-2.5967"/> <atom id="Ribonucleoside-Triphosphates-atom8" elementType="O" x2="7.0373" y2="-3.9908"/> <atom id="Ribonucleoside-Triphosphates-atom9" elementType="O" x2="4.2061" y2="-3.9966"/> <atom id="Ribonucleoside-Triphosphates-atom10" elementType="R" x2="14.4579" y2="-3.0054"/> <atom id="Ribonucleoside-Triphosphates-atom11" elementType="C" x2="9.6322" y2="-3.2433"/> <atom id="Ribonucleoside-Triphosphates-atom12" elementType="O" x2="8.3999" y2="-2.5788"/> <atom id="Ribonucleoside-Triphosphates-atom13" elementType="O" x2="11.9938" y2="-3.3956"/> <atom id="Ribonucleoside-Triphosphates-atom14" elementType="O" x2="2.8" y2="-2.5967"/> <atom id="Ribonucleoside-Triphosphates-atom15" elementType="O" x2="5.6" y2="-2.5957"/> <atom id="Ribonucleoside-Triphosphates-atom16" elementType="C" x2="12.6938" y2="-1.2413"/> <atom id="Ribonucleoside-Triphosphates-atom17" elementType="C" x2="11.2938" y2="-1.2413"/> <atom id="Ribonucleoside-Triphosphates-atom18" elementType="C" x2="13.1264" y2="-2.5727"/> <atom id="Ribonucleoside-Triphosphates-atom19" elementType="C" x2="10.8612" y2="-2.5727"/> <atom id="Ribonucleoside-Triphosphates-atom20" elementType="P" x2="1.4" y2="-2.5967"/> <atom id="Ribonucleoside-Triphosphates-atom21" elementType="P" x2="7.0" y…

unificationXref25158
type: unificationXref
DB: CapCyc
ID: Ribonucleoside-Triphosphates

unificationXref25153
type: unificationXref
DB: CapCyc
ID: NUCLEOSIDE-DIP-KIN-RXN

unificationXref25164
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-32

catalysis25161
type: catalysis
CONTROLLED: biochemicalReaction25152
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25162

unificationXref25162
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-96

catalysis25140
type: catalysis
CONTROLLED: biochemicalReaction25133
CONTROLLER: phys-ent-participant25144
NAME: NUCLEOSIDE-DIPHOSPHATE KINASE
XREF: unificationXref25141

biochemicalReaction25133
type: biochemicalReaction
EC-NUMBER: 2.7.4.6
LEFT: phys-ent-participant25132
LEFT: phys-ent-participant20931
NAME: UDPKIN-RXN
RIGHT: phys-ent-participant21227
RIGHT: phys-ent-participant20977
XREF: unificationXref25134

phys-ent-participant21227
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21222
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21222
type: smallMolecule
MOLECULAR-WEIGHT: 484.143
NAME: UTP
STRUCTURE: chemicalStructure21226
SYNONYMS: uridine-triphosphate
SYNONYMS: uridine-5'-triphosphate
XREF: unificationXref21225
XREF: unificationXref21224
XREF: unificationXref21223

chemicalStructure21226
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UTP-atom1" elementType="H" x2="11.9518" y2="-7.0884"/> <atom id="UTP-atom2" elementType="O" x2="14.3416" y2="-8.4304"/> <atom id="UTP-atom3" elementType="O" x2="11.9633" y2="-4.3079"/> <atom id="UTP-atom4" elementType="O" x2="1.4238" y2="-3.3562"/> <atom id="UTP-atom5" elementType="O" x2="6.9075" y2="-3.3068"/> <atom id="UTP-atom6" elementType="O" x2="4.1666" y2="-3.3068"/> <atom id="UTP-atom7" elementType="O" x2="10.2063" y2="-0.0022"/> <atom id="UTP-atom8" elementType="O" x2="13.1986" y2="0.0"/> <atom id="UTP-atom9" elementType="O" x2="1.3762" y2="-0.5566"/> <atom id="UTP-atom10" elementType="O" x2="0.0" y2="-1.947"/> <atom id="UTP-atom11" elementType="O" x2="6.9034" y2="-0.5674"/> <atom id="UTP-atom12" elementType="O" x2="4.1666" y2="-0.5674"/> <atom id="UTP-atom13" elementType="C" x2="15.5469" y2="-6.3757"/> <atom id="UTP-atom14" elementType="C" x2="15.5469" y2="-4.9907"/> <atom id="UTP-atom15" elementType="C" x2="9.2987" y2="-2.8464"/> <atom id="UTP-atom16" elementType="O" x2="8.2772" y2="-1.9341"/> <atom id="UTP-atom17" elementType="O" x2="11.7001" y2="-3.2155"/> <atom id="UTP-atom18" elementType="O" x2="2.7998" y2="-1.9326"/> <atom id="UTP-atom19" elementType="O" x2="5.5363" y2="-1.9371"/> <atom id="UTP-atom20" elementType="C" x2="14.3453" y2="-7.0607"/> <atom id="UTP-atom21" elementType="C" x2="13.1592" y2="-4.9907"/> <atom id="UTP-atom22" elementType="C" x2="11.0153" y2="-1.1074"/> <atom id="UTP-atom23" elementType="C" x2="12.3925" y2="-1.1074"/> <atom id="UTP-atom24" elementType="C" x2="10.5996" y2="-2.4181"/> <atom id="UTP-atom25" elementType="C" x2="12.816" y2="-2.4181"/> <atom id="UTP-atom26" elementType="N" x2="13.1592" y2="-6.3757"/> <atom id="UTP-atom27" elementType="N" x2="14.3453" y2="-4.2907"/> <atom id="UTP-atom28" elementType="P" x2="1.4" y2="-1.9564"/> <atom id="UTP-atom29" elementType="P" x2="6.906" y2="-1.9371"/> <atom id="UTP-atom30" elementType="P" x2="4.1666" y2="-1.9371"/> <bond id="UTP-bond1" atomRefs="UTP-atom25 UTP-atom27" or…

unificationXref21225
type: unificationXref
DB: CapCyc
ID: UTP

unificationXref21224
type: unificationXref
DB: CAS
ID: 63-39-8

unificationXref21223
type: unificationXref
DB: LIGAND
ID: C00075

unificationXref25134
type: unificationXref
DB: CapCyc
ID: UDPKIN-RXN

unificationXref25141
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-31

catalysis25135
type: catalysis
CONTROLLED: biochemicalReaction25133
CONTROLLER: phys-ent-participant25139
NAME: NUCLEOSIDE DIPHOSPHATE KINASE
XREF: unificationXref25136

unificationXref25136
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-95

catalysis25118
type: catalysis
CONTROLLED: biochemicalReaction25106
CONTROLLER: phys-ent-participant25122
NAME: GTP PYROPHOSPHOKINASE
XREF: unificationXref25119

biochemicalReaction25106
type: biochemicalReaction
EC-NUMBER: 2.7.6.5
LEFT: phys-ent-participant21278
LEFT: phys-ent-participant20931
NAME: GTP diphosphokinase
RIGHT: phys-ent-participant23620
RIGHT: phys-ent-participant21115
SYNONYMS: Guanosine 3',5'-polyphosphate synthase
SYNONYMS: Stringent factor
SYNONYMS: ppGpp synthase I
XREF: unificationXref25107

phys-ent-participant23620
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23616
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23616
type: smallMolecule
MOLECULAR-WEIGHT: 683.142
NAME: guanosine 3'-diphosphate 5'-triphosphate
STRUCTURE: chemicalStructure23619
SYNONYMS: guanosine pentaphosphate
SYNONYMS: pppGpp
SYNONYMS: guanosine 5'-triphosphate,3'-diphosphate
XREF: unificationXref23618
XREF: unificationXref23617

chemicalStructure23619
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GDP-TP-atom1" elementType="H" x2="7.161" y2="-10.2059"/> <atom id="GDP-TP-atom2" elementType="N" x2="7.2145" y2="-7.4949"/> <atom id="GDP-TP-atom3" elementType="O" x2="9.512" y2="-11.4846"/> <atom id="GDP-TP-atom4" elementType="O" x2="7.1568" y2="-0.1106"/> <atom id="GDP-TP-atom5" elementType="O" x2="1.3281" y2="-6.3787"/> <atom id="GDP-TP-atom6" elementType="O" x2="6.6503" y2="-6.3639"/> <atom id="GDP-TP-atom7" elementType="O" x2="9.8621" y2="0.0"/> <atom id="GDP-TP-atom8" elementType="O" x2="3.9892" y2="-6.3713"/> <atom id="GDP-TP-atom9" elementType="O" x2="12.6467" y2="-3.3128"/> <atom id="GDP-TP-atom10" elementType="O" x2="5.8455" y2="-1.4891"/> <atom id="GDP-TP-atom11" elementType="O" x2="7.1736" y2="-2.811"/> <atom id="GDP-TP-atom12" elementType="O" x2="1.3255" y2="-3.6568"/> <atom id="GDP-TP-atom13" elementType="O" x2="0.0" y2="-5.0568"/> <atom id="GDP-TP-atom14" elementType="O" x2="6.6335" y2="-3.5899"/> <atom id="GDP-TP-atom15" elementType="O" x2="11.1676" y2="-1.4795"/> <atom id="GDP-TP-atom16" elementType="O" x2="3.9724" y2="-3.7151"/> <atom id="GDP-TP-atom17" elementType="C" x2="13.0018" y2="-9.4943"/> <atom id="GDP-TP-atom18" elementType="C" x2="8.9195" y2="-5.9708"/> <atom id="GDP-TP-atom19" elementType="N" x2="11.8407" y2="-10.1692"/> <atom id="GDP-TP-atom20" elementType="N" x2="9.5157" y2="-7.4745"/> <atom id="GDP-TP-atom21" elementType="O" x2="7.9831" y2="-5.0399"/> <atom id="GDP-TP-atom22" elementType="O" x2="11.1654" y2="-6.4201"/> <atom id="GDP-TP-atom23" elementType="O" x2="9.8347" y2="-2.8035"/> <atom id="GDP-TP-atom24" elementType="O" x2="8.5066" y2="-1.4816"/> <atom id="GDP-TP-atom25" elementType="O" x2="2.6609" y2="-5.0547"/> <atom id="GDP-TP-atom26" elementType="O" x2="5.322" y2="-5.0473"/> <atom id="GDP-TP-atom27" elementType="C" x2="8.3667" y2="-8.1528"/> <atom id="GDP-TP-atom28" elementType="C" x2="9.5157" y2="-10.1577"/> <atom id="GDP-TP-atom29" elementType="C" x2="10.6795" y2="-9.4943"/> <atom id="GDP-TP-atom30" elementType="…

unificationXref23618
type: unificationXref
DB: CapCyc
ID: GDP-TP

unificationXref23617
type: unificationXref
DB: LIGAND
ID: C04494

unificationXref25107
type: unificationXref
DB: CapCyc
ID: GTPPYPHOSKIN-RXN

phys-ent-participant25122
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25120
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25120
type: protein
NAME: GTP PYROPHOSPHOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25121

unificationXref25121
type: unificationXref
DB: CapCyc
ID: SGNU197579-MONOMER

unificationXref25119
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-201

catalysis25113
type: catalysis
CONTROLLED: biochemicalReaction25106
CONTROLLER: phys-ent-participant25117
NAME: GTP PYROPHOSPHOKINASE
XREF: unificationXref25114

phys-ent-participant25117
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25115
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25115
type: protein
NAME: GTP PYROPHOSPHOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25116

unificationXref25116
type: unificationXref
DB: CapCyc
ID: SGNU202374-MONOMER

unificationXref25114
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-564

catalysis25108
type: catalysis
CONTROLLED: biochemicalReaction25106
CONTROLLER: phys-ent-participant25112
NAME: GTP PYROPHOSPHOKINASE
XREF: unificationXref25109

phys-ent-participant25112
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25110
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25110
type: protein
NAME: GTP PYROPHOSPHOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25111

unificationXref25111
type: unificationXref
DB: CapCyc
ID: SGNU203991-MONOMER

unificationXref25109
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-654

catalysis25101
type: catalysis
CONTROLLED: biochemicalReaction25083
CONTROLLER: phys-ent-participant25105
NAME: RIBOSE PHOSPHATE PYROPHOSPHOKINASE
XREF: unificationXref25102

biochemicalReaction25083
type: biochemicalReaction
EC-NUMBER: 2.7.6.1
LEFT: phys-ent-participant20931
LEFT: phys-ent-participant21816
NAME: ribose-phosphate diphosphokinase
RIGHT: phys-ent-participant25090
RIGHT: phys-ent-participant21115
SYNONYMS: PRPP synthase
XREF: unificationXref25084

unificationXref25084
type: unificationXref
DB: CapCyc
ID: PRPPSYN-RXN

phys-ent-participant25105
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25103
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25103
type: protein
NAME: RIBOSE PHOSPHATE PYROPHOSPHOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25104

unificationXref25104
type: unificationXref
DB: CapCyc
ID: SGNU197291-MONOMER

unificationXref25102
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-172

catalysis25096
type: catalysis
CONTROLLED: biochemicalReaction25083
CONTROLLER: phys-ent-participant25100
NAME: PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE
XREF: unificationXref25097

phys-ent-participant25100
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25098
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25098
type: protein
NAME: PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE
ORGANISM: bioSource20982
XREF: unificationXref25099

unificationXref25099
type: unificationXref
DB: CapCyc
ID: SGNU197446-MONOMER

unificationXref25097
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-183

catalysis25091
type: catalysis
CONTROLLED: biochemicalReaction25083
CONTROLLER: phys-ent-participant25095
NAME: RIBOSE PHOSPHATE PYROPHOSPHOKINASE
XREF: unificationXref25092

phys-ent-participant25095
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25093
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25093
type: protein
NAME: RIBOSE PHOSPHATE PYROPHOSPHOKINASE
ORGANISM: bioSource20982
XREF: unificationXref25094

unificationXref25094
type: unificationXref
DB: CapCyc
ID: SGNU202042-MONOMER

unificationXref25092
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-542

catalysis25078
type: catalysis
CONTROLLED: biochemicalReaction25076
CONTROLLER: phys-ent-participant25082
NAME: MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE
XREF: unificationXref25079

biochemicalReaction25076
type: biochemicalReaction
EC-NUMBER: 2.7.7.13
LEFT: phys-ent-participant21852
LEFT: phys-ent-participant21278
NAME: Mannose-1-phosphate guanylyltransferase
RIGHT: phys-ent-participant22230
RIGHT: phys-ent-participant21108
SYNONYMS: ATP-mannose-1-phosphate guanylyltransferase
XREF: unificationXref25077

phys-ent-participant21852
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21847
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21847
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: alpha-D-mannose 1-phosphate
STRUCTURE: chemicalStructure21851
SYNONYMS: mannose-1-phosphate
SYNONYMS: D-mannose-1-phosphate
SYNONYMS: mannose-1-P
XREF: unificationXref21850
XREF: unificationXref21849
XREF: unificationXref21848

chemicalStructure21851
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MANNOSE-1P-atom1" elementType="O" x2="6.2497" y2="-5.6"/> <atom id="MANNOSE-1P-atom2" elementType="O" x2="0.0" y2="-5.6"/> <atom id="MANNOSE-1P-atom3" elementType="O" x2="2.4249" y2="0.0"/> <atom id="MANNOSE-1P-atom4" elementType="O" x2="0.0" y2="-1.4"/> <atom id="MANNOSE-1P-atom5" elementType="O" x2="4.8497" y2="-1.4"/> <atom id="MANNOSE-1P-atom6" elementType="O" x2="6.2497" y2="-2.8"/> <atom id="MANNOSE-1P-atom7" elementType="O" x2="7.6497" y2="-4.2"/> <atom id="MANNOSE-1P-atom8" elementType="C" x2="0.0" y2="-4.2"/> <atom id="MANNOSE-1P-atom9" elementType="O" x2="2.4249" y2="-4.2"/> <atom id="MANNOSE-1P-atom10" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="MANNOSE-1P-atom11" elementType="C" x2="2.4249" y2="-1.4"/> <atom id="MANNOSE-1P-atom12" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="MANNOSE-1P-atom13" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="MANNOSE-1P-atom14" elementType="C" x2="1.2124" y2="-3.5"/> <atom id="MANNOSE-1P-atom15" elementType="C" x2="3.6373" y2="-3.5"/> <atom id="MANNOSE-1P-atom16" elementType="P" x2="6.2497" y2="-4.2"/> <bond id="MANNOSE-1P-bond1" atomRefs="MANNOSE-1P-atom13 MANNOSE-1P-atom15" order="1"/> <bond id="MANNOSE-1P-bond2" atomRefs="MANNOSE-1P-atom12 MANNOSE-1P-atom14" order="1"/> <bond id="MANNOSE-1P-bond3" atomRefs="MANNOSE-1P-atom11 MANNOSE-1P-atom13" order="1"/> <bond id="MANNOSE-1P-bond4" atomRefs="MANNOSE-1P-atom11 MANNOSE-1P-atom12" order="1"/> <bond id="MANNOSE-1P-bond5" atomRefs="MANNOSE-1P-atom10 MANNOSE-1P-atom16" order="1"/> <bond id="MANNOSE-1P-bond6" atomRefs="MANNOSE-1P-atom15 MANNOSE-1P-atom10" order="1"/> <bond id="MANNOSE-1P-bond7" atomRefs="MANNOSE-1P-atom9 MANNOSE-1P-atom15" order="1"/> <bond id="MANNOSE-1P-bond8" atomRefs="MANNOSE-1P-atom9 MANNOSE-1P-atom14" order="1"/> <bond id="MANNOSE-1P-bond9" atomRefs="MANNOSE-1P-atom14 MANNOSE-1P-atom8" order="1"/> <bond id="MANNOSE-1P-bond10" atomRefs="MANNOSE-1P-atom7 MANNOSE-1P-atom16" order="1"/> <bond id="MANNOSE-1P-bond11" atomRefs="MANNOSE-1…

unificationXref21850
type: unificationXref
DB: CapCyc
ID: MANNOSE-1P

unificationXref21849
type: unificationXref
DB: CAS
ID: 27251-84-9

unificationXref21848
type: unificationXref
DB: LIGAND
ID: C03812

phys-ent-participant22230
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22224
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22224
type: smallMolecule
MOLECULAR-WEIGHT: 605.345
NAME: GDP-D-mannose
STRUCTURE: chemicalStructure22229
SYNONYMS: guanosine pyrophosphate mannose
SYNONYMS: guanosine diphosphomannose
SYNONYMS: guanosine diphosphate mannose
SYNONYMS: GDP-mannose
XREF: unificationXref22228
XREF: unificationXref22227
XREF: unificationXref22226
XREF: unificationXref22225

chemicalStructure22229
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GDP-MANNOSE-atom1" elementType="H" x2="7.3618" y2="-5.756"/> <atom id="GDP-MANNOSE-atom2" elementType="N" x2="7.3763" y2="-4.0891"/> <atom id="GDP-MANNOSE-atom3" elementType="O" x2="8.7982" y2="-6.5587"/> <atom id="GDP-MANNOSE-atom4" elementType="O" x2="6.0119" y2="-3.3834"/> <atom id="GDP-MANNOSE-atom5" elementType="O" x2="4.3687" y2="-3.3834"/> <atom id="GDP-MANNOSE-atom6" elementType="O" x2="0.0" y2="-2.0625"/> <atom id="GDP-MANNOSE-atom7" elementType="O" x2="0.7145" y2="-0.8249"/> <atom id="GDP-MANNOSE-atom8" elementType="O" x2="7.9896" y2="-1.4021"/> <atom id="GDP-MANNOSE-atom9" elementType="O" x2="2.1434" y2="0.0"/> <atom id="GDP-MANNOSE-atom10" elementType="O" x2="3.5724" y2="-0.8249"/> <atom id="GDP-MANNOSE-atom11" elementType="O" x2="9.7863" y2="-1.3972"/> <atom id="GDP-MANNOSE-atom12" elementType="O" x2="6.0094" y2="-1.7411"/> <atom id="GDP-MANNOSE-atom13" elementType="O" x2="4.3687" y2="-1.7411"/> <atom id="GDP-MANNOSE-atom14" elementType="C" x2="10.7925" y2="-4.9074"/> <atom id="GDP-MANNOSE-atom15" elementType="C" x2="0.7145" y2="-2.475"/> <atom id="GDP-MANNOSE-atom16" elementType="C" x2="7.4455" y2="-3.1073"/> <atom id="GDP-MANNOSE-atom17" elementType="N" x2="10.3112" y2="-5.5823"/> <atom id="GDP-MANNOSE-atom18" elementType="N" x2="8.8006" y2="-4.0767"/> <atom id="GDP-MANNOSE-atom19" elementType="O" x2="6.8331" y2="-2.5605"/> <atom id="GDP-MANNOSE-atom20" elementType="O" x2="2.1434" y2="-2.475"/> <atom id="GDP-MANNOSE-atom21" elementType="O" x2="8.8852" y2="-3.3287"/> <atom id="GDP-MANNOSE-atom22" elementType="O" x2="3.5493" y2="-2.5596"/> <atom id="GDP-MANNOSE-atom23" elementType="O" x2="5.1898" y2="-2.5623"/> <atom id="GDP-MANNOSE-atom24" elementType="C" x2="8.0894" y2="-4.4965"/> <atom id="GDP-MANNOSE-atom25" elementType="C" x2="8.8006" y2="-5.7375"/> <atom id="GDP-MANNOSE-atom26" elementType="C" x2="9.5208" y2="-5.3268"/> <atom id="GDP-MANNOSE-atom27" elementType="C" x2="9.5208" y2="-4.4965"/> <atom id="GDP-MANNOSE-atom28" elementType="C" …

unificationXref22228
type: unificationXref
DB: CapCyc
ID: GDP-MANNOSE

unificationXref22227
type: unificationXref
DB: CAS
ID: 3123-67-9

unificationXref22226
type: unificationXref
DB: CAS
ID: 18441-12-8

unificationXref22225
type: unificationXref
DB: LIGAND
ID: C00096

unificationXref25077
type: unificationXref
DB: CapCyc
ID: 2.7.7.13-RXN

phys-ent-participant25082
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25080
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25080
type: protein
NAME: MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25081

unificationXref25081
type: unificationXref
DB: CapCyc
ID: SGNU200636-MONOMER

unificationXref25079
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-435

catalysis25071
type: catalysis
CONTROLLED: biochemicalReaction25059
CONTROLLER: phys-ent-participant25075
NAME: 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase
XREF: unificationXref25072

biochemicalReaction25059
type: biochemicalReaction
COMMENT: NIL ATP or UTP can replace CTP, but both are less effective.
EC-NUMBER: 2.7.7.60
LEFT: phys-ent-participant25065
LEFT: phys-ent-participant21233
NAME: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RIGHT: phys-ent-participant25070
RIGHT: phys-ent-participant21108
SYNONYMS: MEP cytidylyltransferase
SYNONYMS: MCT
SYNONYMS: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
XREF: unificationXref25060

phys-ent-participant25070
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule25066
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule25066
type: smallMolecule
MOLECULAR-WEIGHT: 521.311
NAME: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
STRUCTURE: chemicalStructure25069
SYNONYMS: CDP-ME
SYNONYMS: CDP-methyl-D-erythritol
SYNONYMS: 4-diphosphocytidyl-2C-methyl-D-erythritol
SYNONYMS: 4-diphosphocytidyl-2-C-methylerythritol
XREF: unificationXref25068
XREF: unificationXref25067

chemicalStructure25069
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom1" elementType="C" x2="0.2493" y2="-5.8676"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom2" elementType="N" x2="19.5638" y2="-2.8175"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom3" elementType="O" x2="15.3113" y2="0.0"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom4" elementType="O" x2="5.8856" y2="-4.8164"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom5" elementType="O" x2="8.6851" y2="-4.8361"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom6" elementType="O" x2="0.0" y2="-2.7655"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom7" elementType="O" x2="2.1919" y2="-2.4655"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom8" elementType="O" x2="10.7486" y2="-1.4012"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom9" elementType="O" x2="13.5272" y2="-0.1537"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom10" elementType="O" x2="2.1982" y2="-5.8557"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom11" elementType="O" x2="5.8834" y2="-2.0164"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom12" elementType="O" x2="8.6818" y2="-2.0361"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom13" elementType="C" x2="17.7906" y2="-3.3901"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom14" elementType="C" x2="16.3987" y2="-3.5408"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom15" elementType="C" x2="0.0" y2="-4.1655"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom16" elementType="C" x2="3.4837" y2="-4.4385"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom17" elementType="C" x2="11.0764" y2="-4.4293"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom18" elementType="N" x2="17.5296" y2="-0.9793"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom19" elementType="O" x2="4.4901" y2="-3.4653"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom20" elementType="O" x2="10.0891" y2="-3.4368"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom21" elementType="O" x2="13.4842" y2="-3.7761"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom22" elementType="O" x2="7.2892" y2="-3.4272"/> <atom id="4-CYTIDINE-5-DIPHOSPHO-2-C-atom23" elementType="C" x2="18.356" …

unificationXref25068
type: unificationXref
DB: CapCyc
ID: 4-CYTIDINE-5-DIPHOSPHO-2-C

unificationXref25067
type: unificationXref
DB: LIGAND
ID: C11435

unificationXref25060
type: unificationXref
DB: CapCyc
ID: 2.7.7.60-RXN

phys-ent-participant25075
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25073
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25073
type: protein
NAME: 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase
ORGANISM: bioSource20982
XREF: unificationXref25074

unificationXref25074
type: unificationXref
DB: CapCyc
ID: SGNU198361-MONOMER

unificationXref25072
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-288

catalysis25054
type: catalysis
CONTROLLED: biochemicalReaction25047
CONTROLLER: phys-ent-participant25058
NAME: PHOSPHATIDATE CYTIDYLYLTRANSFERASE
XREF: unificationXref25055

biochemicalReaction25047
type: biochemicalReaction
EC-NUMBER: 2.7.7.41
LEFT: phys-ent-participant21233
LEFT: phys-ent-participant24393
NAME: phosphatidate cytidylyltransferase
RIGHT: phys-ent-participant24920
RIGHT: phys-ent-participant21108
SYNONYMS: CDP-diacylglycerol synthase
SYNONYMS: CDP-diglyceride diphosphorylase
SYNONYMS: CDP-diglyceride pyrophosphorylase
XREF: unificationXref25048

phys-ent-participant24393
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24389
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24389
type: smallMolecule
COMMENT: Phosphatidates consist of a glycerol backbone, with a (usually) saturated fatty acid bonded to carbon-1, a (usually) unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3.
NAME: an L-phosphatidate
STRUCTURE: chemicalStructure24392
SYNONYMS: phosphatidate (E.coli)
SYNONYMS: L-phosphatidate
SYNONYMS: A 3-SN-phosphatidate
SYNONYMS: diacyl-glycerol-3p
SYNONYMS: diacyl-glycerol-p
SYNONYMS: 1,2-diacyl-sn-glycerol-3-phosphate
SYNONYMS: phosphatidic acid
SYNONYMS: 1,2-diacylglycerol-3-phosphate
SYNONYMS: phosphatidate
SYNONYMS: diacylglycerol-3-phosphate
XREF: unificationXref24391
XREF: unificationXref24390

chemicalStructure24392
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="L-PHOSPHATIDATE" title="an L-phosphatidate" dictRef="dictL-PHOSPHATIDATE"> <atomArray> <atom id="L-PHOSPHATIDATE-atom1" elementType="O" x2="3.1666" y2="-4.6917"/> <atom id="L-PHOSPHATIDATE-atom2" elementType="C" x2="3.8162" y2="-4.3167"/> <atom id="L-PHOSPHATIDATE-atom3" elementType="C" x2="4.4657" y2="-4.6917"/> <atom id="L-PHOSPHATIDATE-atom4" elementType="O" x2="5.1152" y2="-4.3167"/> <atom id="L-PHOSPHATIDATE-atom5" elementType="C" x2="4.4657" y2="-5.4417"/> <atom id="L-PHOSPHATIDATE-atom6" elementType="C" x2="5.7647" y2="-4.6917"/> <atom id="L-PHOSPHATIDATE-atom7" elementType="R" x2="6.4142" y2="-4.3167"/> <atom id="L-PHOSPHATIDATE-atom8" elementType="O" x2="5.7647" y2="-5.4417"/> <atom id="L-PHOSPHATIDATE-atom9" elementType="C" x2="2.5171" y2="-4.3167"/> <atom id="L-PHOSPHATIDATE-atom10" elementType="R" x2="1.8676" y2="-4.6917"/> <atom id="L-PHOSPHATIDATE-atom11" elementType="O" x2="2.5171" y2="-3.5667"/> <atom id="L-PHOSPHATIDATE-atom12" elementType="O" x2="3.8162" y2="-5.8167"/> <atom id="L-PHOSPHATIDATE-atom13" elementType="P" x2="3.8162" y2="-6.5667"/> <atom id="L-PHOSPHATIDATE-atom14" elementType="O" x2="3.0625" y2="-6.5625"/> <atom id="L-PHOSPHATIDATE-atom15" elementType="O" x2="4.5625" y2="-6.5625"/> <atom id="L-PHOSPHATIDATE-atom16" elementType="O" x2="3.8026" y2="-7.3375"/> </atomArray> <bondArray> <bond id="L-PHOSPHATIDATE-bond1" atomRefs="L-PHOSPHATIDATE-atom13 L-PHOSPHATIDATE-atom16" order="1"/> <bond id="L-PHOSPHATIDATE-bond2" atomRefs="L-PHOSPHATIDATE-atom13 L-PHOSPHATIDATE-atom15" order="2"/> <bond id="L-PHOSPHATIDATE-bond3" atomRefs="L-PHOSPHATIDATE-atom13 L-PHOSPHATIDATE-atom14" order="1"/> <bond id="L-PHOSPHATIDATE-bond4" atomRefs="L-PHOSPHATIDATE-atom12 L-PHOSPHATIDATE-atom13" order="1"/> <bond id="L-PHOSPHATIDATE-bond5" atomRefs="L-PHOSPHATIDATE-atom5 L-PHOSPHATIDATE-atom12" order="1"/> <bond id="L-PHOSPHATIDATE-bond6" atomRefs="L-PHOSPHATIDATE-atom9 L-PHOSPHATIDATE-atom11" order="2"/> <bond id="L-PHOSPHATIDATE-bond7" at…

unificationXref24391
type: unificationXref
DB: CapCyc
ID: L-PHOSPHATIDATE

unificationXref24390
type: unificationXref
DB: LIGAND
ID: C00416

phys-ent-participant24920
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24916
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24916
type: smallMolecule
NAME: a CDP-diacylglycerol
STRUCTURE: chemicalStructure24919
SYNONYMS: CDP-diglyceride
SYNONYMS: CDP-1,2-diglyceride
SYNONYMS: CDP-1,2-diacylglycerol
XREF: unificationXref24918
XREF: unificationXref24917

chemicalStructure24919
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="CDPDIACYLGLYCEROL" title="a CDP-diacylglycerol" dictRef="dictCDPDIACYLGLYCEROL"> <atomArray> <atom id="CDPDIACYLGLYCEROL-atom1" elementType="N" x2="10.2917" y2="-5.2968"/> <atom id="CDPDIACYLGLYCEROL-atom2" elementType="O" x2="8.8646" y2="-2.8068"/> <atom id="CDPDIACYLGLYCEROL-atom3" elementType="O" x2="4.3454" y2="-2.5055"/> <atom id="CDPDIACYLGLYCEROL-atom4" elementType="O" x2="5.9943" y2="-2.5055"/> <atom id="CDPDIACYLGLYCEROL-atom5" elementType="O" x2="8.1985" y2="0.0"/> <atom id="CDPDIACYLGLYCEROL-atom6" elementType="O" x2="10.0064" y2="0.0"/> <atom id="CDPDIACYLGLYCEROL-atom7" elementType="O" x2="4.3454" y2="-0.8719"/> <atom id="CDPDIACYLGLYCEROL-atom8" elementType="O" x2="5.9943" y2="-0.8565"/> <atom id="CDPDIACYLGLYCEROL-atom9" elementType="C" x2="11.0212" y2="-4.0441"/> <atom id="CDPDIACYLGLYCEROL-atom10" elementType="C" x2="11.0212" y2="-3.2035"/> <atom id="CDPDIACYLGLYCEROL-atom11" elementType="C" x2="7.6278" y2="-1.681"/> <atom id="CDPDIACYLGLYCEROL-atom12" elementType="N" x2="9.5627" y2="-4.0441"/> <atom id="CDPDIACYLGLYCEROL-atom13" elementType="O" x2="6.8188" y2="-1.681"/> <atom id="CDPDIACYLGLYCEROL-atom14" elementType="O" x2="9.087" y2="-1.9348"/> <atom id="CDPDIACYLGLYCEROL-atom15" elementType="O" x2="5.1699" y2="-1.681"/> <atom id="CDPDIACYLGLYCEROL-atom16" elementType="C" x2="10.2917" y2="-4.4718"/> <atom id="CDPDIACYLGLYCEROL-atom17" elementType="C" x2="9.5627" y2="-3.235"/> <atom id="CDPDIACYLGLYCEROL-atom18" elementType="C" x2="8.6742" y2="-0.6501"/> <atom id="CDPDIACYLGLYCEROL-atom19" elementType="C" x2="9.5147" y2="-0.6501"/> <atom id="CDPDIACYLGLYCEROL-atom20" elementType="C" x2="8.4363" y2="-1.4591"/> <atom id="CDPDIACYLGLYCEROL-atom21" elementType="C" x2="9.7525" y2="-1.4271"/> <atom id="CDPDIACYLGLYCEROL-atom22" elementType="N" x2="10.2917" y2="-2.8068"/> <atom id="CDPDIACYLGLYCEROL-atom23" elementType="P" x2="4.3454" y2="-1.681"/> <atom id="CDPDIACYLGLYCEROL-atom24" elementType="P" x2="5.9943" y2="-1.681"/> <atom id=…

unificationXref24918
type: unificationXref
DB: CapCyc
ID: CDPDIACYLGLYCEROL

unificationXref24917
type: unificationXref
DB: LIGAND
ID: C00269

unificationXref25048
type: unificationXref
DB: CapCyc
ID: CDPDIGLYSYN-RXN

phys-ent-participant25058
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25056
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25056
type: protein
NAME: PHOSPHATIDATE CYTIDYLYLTRANSFERASE
ORGANISM: bioSource20982
XREF: unificationXref25057

unificationXref25057
type: unificationXref
DB: CapCyc
ID: SGNU197294-MONOMER

unificationXref25055
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-173

catalysis25049
type: catalysis
CONTROLLED: biochemicalReaction25047
CONTROLLER: phys-ent-participant25053
NAME: CDP-DIACYLGLYCEROL SYNTHETASE
XREF: unificationXref25050

phys-ent-participant25053
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25051
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25051
type: protein
NAME: CDP-DIACYLGLYCEROL SYNTHETASE
ORGANISM: bioSource20982
XREF: unificationXref25052

unificationXref25052
type: unificationXref
DB: CapCyc
ID: SGNU203312-MONOMER

unificationXref25050
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-612

catalysis25032
type: catalysis
CONTROLLED: biochemicalReaction25009
CONTROLLER: phys-ent-participant25036
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE
XREF: unificationXref25033

biochemicalReaction25009
type: biochemicalReaction
EC-NUMBER: 2.7.7.27
LEFT: phys-ent-participant21824
LEFT: phys-ent-participant20931
NAME: Glucose-1-phosphate adenylyltransferase
RIGHT: phys-ent-participant25016
RIGHT: phys-ent-participant21108
SYNONYMS: ADP-glucose diphosphorylase
SYNONYMS: ADP-glucose pyrophosphorylase
SYNONYMS: ADP-glucose synthase
XREF: unificationXref25010

phys-ent-participant21824
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21819
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21819
type: smallMolecule
MOLECULAR-WEIGHT: 260.137
NAME: alpha-D-glucose 1-phosphate
STRUCTURE: chemicalStructure21823
SYNONYMS: glucose 1-phosphate
SYNONYMS: cori ester
SYNONYMS: D-glucose 1-phosphate
SYNONYMS: glucose-1P
SYNONYMS: α-glucose-1-phosphate
SYNONYMS: D-glucose-α-1-phosphate
SYNONYMS: α-D-glucose-1-P
SYNONYMS: D-glucose-1-phosphate
XREF: unificationXref21822
XREF: unificationXref21821
XREF: unificationXref21820

chemicalStructure21823
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLC-1-P-atom1" elementType="O" x2="7.5944" y2="-5.6"/> <atom id="GLC-1-P-atom2" elementType="O" x2="0.0" y2="-3.8449"/> <atom id="GLC-1-P-atom3" elementType="O" x2="3.7791" y2="0.0"/> <atom id="GLC-1-P-atom4" elementType="O" x2="1.3542" y2="-1.4"/> <atom id="GLC-1-P-atom5" elementType="O" x2="6.204" y2="-1.4"/> <atom id="GLC-1-P-atom6" elementType="O" x2="7.604" y2="-2.8"/> <atom id="GLC-1-P-atom7" elementType="O" x2="9.004" y2="-4.2"/> <atom id="GLC-1-P-atom8" elementType="C" x2="1.3542" y2="-4.2"/> <atom id="GLC-1-P-atom9" elementType="O" x2="3.7791" y2="-4.2"/> <atom id="GLC-1-P-atom10" elementType="O" x2="6.204" y2="-4.2"/> <atom id="GLC-1-P-atom11" elementType="C" x2="3.7791" y2="-1.4"/> <atom id="GLC-1-P-atom12" elementType="C" x2="2.5667" y2="-2.1"/> <atom id="GLC-1-P-atom13" elementType="C" x2="4.9915" y2="-2.1"/> <atom id="GLC-1-P-atom14" elementType="C" x2="2.5667" y2="-3.5"/> <atom id="GLC-1-P-atom15" elementType="C" x2="4.9915" y2="-3.5"/> <atom id="GLC-1-P-atom16" elementType="P" x2="7.604" y2="-4.2"/> <bond id="GLC-1-P-bond1" atomRefs="GLC-1-P-atom13 GLC-1-P-atom15" order="1"/> <bond id="GLC-1-P-bond2" atomRefs="GLC-1-P-atom12 GLC-1-P-atom14" order="1"/> <bond id="GLC-1-P-bond3" atomRefs="GLC-1-P-atom11 GLC-1-P-atom13" order="1"/> <bond id="GLC-1-P-bond4" atomRefs="GLC-1-P-atom11 GLC-1-P-atom12" order="1"/> <bond id="GLC-1-P-bond5" atomRefs="GLC-1-P-atom10 GLC-1-P-atom16" order="1"/> <bond id="GLC-1-P-bond6" atomRefs="GLC-1-P-atom15 GLC-1-P-atom10" order="1"/> <bond id="GLC-1-P-bond7" atomRefs="GLC-1-P-atom9 GLC-1-P-atom15" order="1"/> <bond id="GLC-1-P-bond8" atomRefs="GLC-1-P-atom9 GLC-1-P-atom14" order="1"/> <bond id="GLC-1-P-bond9" atomRefs="GLC-1-P-atom14 GLC-1-P-atom8" order="1"/> <bond id="GLC-1-P-bond10" atomRefs="GLC-1-P-atom7 GLC-1-P-atom16" order="1"/> <bond id="GLC-1-P-bond11" atomRefs="GLC-1-P-atom6 GLC-1-P-atom16" order="1"/> <bond id="GLC-1-P-bond12" atomRefs="GLC-1-P-atom13 GLC-1-P-atom5" order="1"/> <bond id="GLC-1-P-bond13" …

unificationXref21822
type: unificationXref
DB: CapCyc
ID: GLC-1-P

unificationXref21821
type: unificationXref
DB: LIGAND
ID: C00103

unificationXref21820
type: unificationXref
DB: CAS
ID: 59-56-3

unificationXref25010
type: unificationXref
DB: CapCyc
ID: GLUC1PADENYLTRANS-RXN

phys-ent-participant25036
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25034
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25034
type: protein
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE
ORGANISM: bioSource20982
XREF: unificationXref25035

unificationXref25035
type: unificationXref
DB: CapCyc
ID: SGNU199927-MONOMER

unificationXref25033
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-388

catalysis25027
type: catalysis
CONTROLLED: biochemicalReaction25009
CONTROLLER: phys-ent-participant25031
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT
XREF: unificationXref25028

phys-ent-participant25031
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25029
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25029
type: protein
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT
ORGANISM: bioSource20982
XREF: unificationXref25030

unificationXref25030
type: unificationXref
DB: CapCyc
ID: SGNU200766-MONOMER

unificationXref25028
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-448

catalysis25022
type: catalysis
CONTROLLED: biochemicalReaction25009
CONTROLLER: phys-ent-participant25026
NAME: ADP-glucose pyrophosphorylase
XREF: unificationXref25023

phys-ent-participant25026
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25024
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25024
type: protein
NAME: ADP-glucose pyrophosphorylase
ORGANISM: bioSource20982
XREF: unificationXref25025

unificationXref25025
type: unificationXref
DB: CapCyc
ID: SGNU202186-MONOMER

unificationXref25023
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-552

catalysis25017
type: catalysis
CONTROLLED: biochemicalReaction25009
CONTROLLER: phys-ent-participant25021
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT
XREF: unificationXref25018

phys-ent-participant25021
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25019
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25019
type: protein
NAME: ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT
ORGANISM: bioSource20982
XREF: unificationXref25020

unificationXref25020
type: unificationXref
DB: CapCyc
ID: SGNU204514-MONOMER

unificationXref25018
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-692

catalysis25002
type: catalysis
CONTROLLED: biochemicalReaction25000
CONTROLLER: phys-ent-participant25006
NAME: GDP-MANNOSE PYROPHOSPHORYLASE
XREF: unificationXref25003

biochemicalReaction25000
type: biochemicalReaction
EC-NUMBER: 2.7.7.22
LEFT: phys-ent-participant21852
LEFT: phys-ent-participant21290
NAME: Mannose-1-phosphate guanylyltransferase (GDP)
RIGHT: phys-ent-participant22230
RIGHT: phys-ent-participant20970
SYNONYMS: GDP-mannose phosphorylase
SYNONYMS: GDP-mannose pyrophosphorylase
XREF: unificationXref25001

unificationXref25001
type: unificationXref
DB: CapCyc
ID: MANNPGUANYLTRANGDP-RXN

phys-ent-participant25006
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein25004
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein25004
type: protein
NAME: GDP-MANNOSE PYROPHOSPHORYLASE
ORGANISM: bioSource20982
XREF: unificationXref25005

unificationXref25005
type: unificationXref
DB: CapCyc
ID: SGNU198424-MONOMER

unificationXref25003
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-297

catalysis24993
type: catalysis
CONTROLLED: biochemicalReaction24967
CONTROLLER: phys-ent-participant24997
NAME: ATP sulfurylase
XREF: unificationXref24994

biochemicalReaction24967
type: biochemicalReaction
EC-NUMBER: 2.7.7.4
LEFT: phys-ent-participant24975
LEFT: phys-ent-participant20931
NAME: Sulfate adenylyltransferase
RIGHT: phys-ent-participant24982
RIGHT: phys-ent-participant21108
SYNONYMS: Sulfurylase
SYNONYMS: ATP-sulfurylase
SYNONYMS: Sulfate adenylate transferase
XREF: unificationXref24968

unificationXref24968
type: unificationXref
DB: CapCyc
ID: SULFATE-ADENYLYLTRANS-RXN

phys-ent-participant24997
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24995
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24995
type: protein
NAME: ATP sulfurylase
ORGANISM: bioSource20982
XREF: unificationXref24996

unificationXref24996
type: unificationXref
DB: CapCyc
ID: SGNU196590-MONOMER

unificationXref24994
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-73

catalysis24988
type: catalysis
CONTROLLED: biochemicalReaction24967
CONTROLLER: phys-ent-participant24992
NAME: ATP sulfurylase
XREF: unificationXref24989

phys-ent-participant24992
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24990
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24990
type: protein
NAME: ATP sulfurylase
ORGANISM: bioSource20982
XREF: unificationXref24991

unificationXref24991
type: unificationXref
DB: CapCyc
ID: SGNU196894-MONOMER

unificationXref24989
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-118

catalysis24983
type: catalysis
CONTROLLED: biochemicalReaction24967
CONTROLLER: phys-ent-participant24987
NAME: ATP sulfurylase
XREF: unificationXref24984

phys-ent-participant24987
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24985
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24985
type: protein
NAME: ATP sulfurylase
ORGANISM: bioSource20982
XREF: unificationXref24986

unificationXref24986
type: unificationXref
DB: CapCyc
ID: SGNU196895-MONOMER

unificationXref24984
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-119

catalysis24902
type: catalysis
CONTROLLED: biochemicalReaction24887
CONTROLLER: phys-ent-participant24876
NAME: BIOTIN SYNTHASE
XREF: unificationXref24903

biochemicalReaction24887
type: biochemicalReaction
EC-NUMBER: 2.8.1.6
LEFT: phys-ent-participant21315
LEFT: phys-ent-participant24889
LEFT: phys-ent-participant24884
NAME: biotin synthase
RIGHT: phys-ent-participant24871
RIGHT: phys-ent-participant24894
RIGHT: phys-ent-participant24901
SYNONYMS: bioB
XREF: unificationXref24888

phys-ent-participant21315
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21310
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21310
type: smallMolecule
MOLECULAR-WEIGHT: 214.264
NAME: dethiobiotin
STRUCTURE: chemicalStructure21314
SYNONYMS: Desthiobiotin
SYNONYMS: DTB
XREF: unificationXref21313
XREF: unificationXref21312
XREF: unificationXref21311

chemicalStructure21314
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DETHIOBIOTIN-atom1" elementType="C" x2="-0.5833333" y2="-0.62333333"/> <atom id="DETHIOBIOTIN-atom2" elementType="O" x2="0.8000001" y2="-0.65"/> <atom id="DETHIOBIOTIN-atom3" elementType="C" x2="-0.40999997" y2="-1.0"/> <atom id="DETHIOBIOTIN-atom4" elementType="C" x2="0.8000001" y2="-0.88"/> <atom id="DETHIOBIOTIN-atom5" elementType="O" x2="-0.5833333" y2="-0.43333334"/> <atom id="DETHIOBIOTIN-atom6" elementType="C" x2="-0.18666667" y2="-1.0"/> <atom id="DETHIOBIOTIN-atom7" elementType="C" x2="0.60333335" y2="-0.99333334"/> <atom id="DETHIOBIOTIN-atom8" elementType="C" x2="0.00999999" y2="-0.88"/> <atom id="DETHIOBIOTIN-atom9" elementType="C" x2="0.40666676" y2="-0.88"/> <atom id="DETHIOBIOTIN-atom10" elementType="N" x2="-0.7733333" y2="-0.7633333"/> <atom id="DETHIOBIOTIN-atom11" elementType="C" x2="0.20666671" y2="-0.99333334"/> <atom id="DETHIOBIOTIN-atom12" elementType="N" x2="-0.40999997" y2="-0.7633333"/> <atom id="DETHIOBIOTIN-atom13" elementType="C" x2="-1.0" y2="-1.0"/> <atom id="DETHIOBIOTIN-atom14" elementType="O" x2="0.99666667" y2="-0.99333334"/> <atom id="DETHIOBIOTIN-atom15" elementType="C" x2="-0.7733333" y2="-1.0"/> <bond id="DETHIOBIOTIN-bond1" atomRefs="DETHIOBIOTIN-atom15 DETHIOBIOTIN-atom3" order="1"/> <bond id="DETHIOBIOTIN-bond2" atomRefs="DETHIOBIOTIN-atom15 DETHIOBIOTIN-atom10" order="1"/> <bond id="DETHIOBIOTIN-bond3" atomRefs="DETHIOBIOTIN-atom13 DETHIOBIOTIN-atom15" order="1"/> <bond id="DETHIOBIOTIN-bond4" atomRefs="DETHIOBIOTIN-atom12 DETHIOBIOTIN-atom1" order="1"/> <bond id="DETHIOBIOTIN-bond5" atomRefs="DETHIOBIOTIN-atom11 DETHIOBIOTIN-atom9" order="1"/> <bond id="DETHIOBIOTIN-bond6" atomRefs="DETHIOBIOTIN-atom10 DETHIOBIOTIN-atom1" order="1"/> <bond id="DETHIOBIOTIN-bond7" atomRefs="DETHIOBIOTIN-atom9 DETHIOBIOTIN-atom7" order="1"/> <bond id="DETHIOBIOTIN-bond8" atomRefs="DETHIOBIOTIN-atom8 DETHIOBIOTIN-atom11" order="1"/> <bond id="DETHIOBIOTIN-bond9" atomRefs="DETHIOBIOTIN-atom7 DETHIOBIOTIN-atom4" order="1"/> <bond id="…

unificationXref21313
type: unificationXref
DB: CapCyc
ID: DETHIOBIOTIN

unificationXref21312
type: unificationXref
DB: CAS
ID: 533-48-2

unificationXref21311
type: unificationXref
DB: LIGAND
ID: C01909

phys-ent-participant24889
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23314
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

phys-ent-participant24884
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24879
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24879
type: smallMolecule
COMMENT: The precise nature of this sulfur donor has been unidentified to date - it is not elemental sulfur or an iron-sulfur cluster.
NAME: sulfur donor
STRUCTURE: chemicalStructure24883
SYNONYMS: (S)
XREF: unificationXref24882
XREF: unificationXref24881
XREF: unificationXref24880

chemicalStructure24883
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="CPD-249" title="sulfur donor" dictRef="dictCPD-249"> <atomArray> <atom id="CPD-249-atom1" elementType="S" x2="2.0" y2="0.0"/> </atomArray> <bondArray> </bondArray> <formula concise="H 2 S 1" formalCharge="0"/> <string title="smiles">S</string> </molecule> </cml>

unificationXref24882
type: unificationXref
DB: CapCyc
ID: CPD-249

unificationXref24881
type: unificationXref
DB: CAS
ID: 7704-34-9

unificationXref24880
type: unificationXref
DB: NCI
ID: 403664

phys-ent-participant24871
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24866
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24866
type: smallMolecule
COMMENT: Biotin was first discovered at the turn of the 20th century as a yeast growth factor, and was named bios |CITS: [Wildiers01]|. 30 years later, the compound was purified from egg yolk by Koegl and Toennis |CITS: [Koegl36]|. In a completely unrelated research, Gyoergy and his colleagues discovered biotin in liver in 1931, and isolated it in 1941. They named it vitamin H (for the German word for skin: Haut) |CITS: [Vigneaud41]|. At the same time, another group, which was working on rhizobia, also identified it as an essential cofactor, which they named coenzyme R|CITS: [Allison38]|. Already in 1933, Gyoergy suggested that coenzyme R, bios and vitamin H were all the same molecule. The structure of biotin was solved in 1941 -1942 |CITS: [Vigneaud41B][Melville42]|. In 1949 the first evidence was published demonstrating the biochemical role of biotin in carboxylation reactions, |CITS: [Lardy49]|, and in 1958 it was suggested that biotin was probably associated with an enzyme |CITS: [13560478]|. Shortly after this finding, Lynen et al |CITS: [Lynen61]| described biotin's biological function as a cofactor in the biotin-dependent carboxylases. (This historical background is adapted from |CITS: [12658511]|).
MOLECULAR-WEIGHT: 244.308
NAME: biotin
STRUCTURE: chemicalStructure24870
SYNONYMS: vitamin H
SYNONYMS: coenzyme R
SYNONYMS: d-biotin
XREF: unificationXref24869
XREF: unificationXref24868
XREF: unificationXref24867

chemicalStructure24870
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="BIOTIN-atom1" elementType="H" x2="0.0" y2="-3.415"/> <atom id="BIOTIN-atom2" elementType="H" x2="4.2" y2="-3.415"/> <atom id="BIOTIN-atom3" elementType="O" x2="9.3005" y2="0.0"/> <atom id="BIOTIN-atom4" elementType="O" x2="2.1" y2="-6.9694"/> <atom id="BIOTIN-atom5" elementType="O" x2="10.5072" y2="-2.1033"/> <atom id="BIOTIN-atom6" elementType="C" x2="6.8718" y2="-1.3934"/> <atom id="BIOTIN-atom7" elementType="C" x2="5.6575" y2="-2.0901"/> <atom id="BIOTIN-atom8" elementType="C" x2="8.0823" y2="-2.0967"/> <atom id="BIOTIN-atom9" elementType="C" x2="4.447" y2="-1.3868"/> <atom id="BIOTIN-atom10" elementType="C" x2="0.9674" y2="-2.0835"/> <atom id="BIOTIN-atom11" elementType="N" x2="0.9674" y2="-4.7465"/> <atom id="BIOTIN-atom12" elementType="N" x2="3.2326" y2="-4.7465"/> <atom id="BIOTIN-atom13" elementType="S" x2="2.1" y2="-1.2606"/> <atom id="BIOTIN-atom14" elementType="C" x2="9.2967" y2="-1.4"/> <atom id="BIOTIN-atom15" elementType="C" x2="2.1" y2="-5.5694"/> <atom id="BIOTIN-atom16" elementType="C" x2="3.2326" y2="-2.0835"/> <atom id="BIOTIN-atom17" elementType="C" x2="1.4" y2="-3.415"/> <atom id="BIOTIN-atom18" elementType="C" x2="2.8" y2="-3.415"/> <bond id="BIOTIN-bond1" atomRefs="BIOTIN-atom17 BIOTIN-atom18" order="1"/> <bond id="BIOTIN-bond2" atomRefs="BIOTIN-atom16 BIOTIN-atom18" order="1"/> <bond id="BIOTIN-bond3" atomRefs="BIOTIN-atom13 BIOTIN-atom16" order="1"/> <bond id="BIOTIN-bond4" atomRefs="BIOTIN-atom12 BIOTIN-atom18" order="1"/> <bond id="BIOTIN-bond5" atomRefs="BIOTIN-atom12 BIOTIN-atom15" order="1"/> <bond id="BIOTIN-bond6" atomRefs="BIOTIN-atom11 BIOTIN-atom17" order="1"/> <bond id="BIOTIN-bond7" atomRefs="BIOTIN-atom11 BIOTIN-atom15" order="1"/> <bond id="BIOTIN-bond8" atomRefs="BIOTIN-atom10 BIOTIN-atom17" order="1"/> <bond id="BIOTIN-bond9" atomRefs="BIOTIN-atom10 BIOTIN-atom13" order="1"/> <bond id="BIOTIN-bond10" atomRefs="BIOTIN-atom16 BIOTIN-atom9" order="1"/> <bond id="BIOTIN-bond11" atomRefs="BIOTIN-atom8 BIOTIN-atom14" orde…

unificationXref24869
type: unificationXref
DB: CapCyc
ID: BIOTIN

unificationXref24868
type: unificationXref
DB: CAS
ID: 58-85-5

unificationXref24867
type: unificationXref
DB: LIGAND
ID: C00120

phys-ent-participant24894
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24890
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

smallMolecule24890
type: smallMolecule
MOLECULAR-WEIGHT: 251.244
NAME: 5'-deoxyadenosine
STRUCTURE: chemicalStructure24893
SYNONYMS: 5'-deoxyadenosine
SYNONYMS: CH3Ado
XREF: unificationXref24892
XREF: unificationXref24891

chemicalStructure24893
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CH33ADO-atom1" elementType="H" x2="0.7126" y2="-1.6988"/> <atom id="CH33ADO-atom2" elementType="H" x2="2.9135" y2="-1.6988"/> <atom id="CH33ADO-atom3" elementType="H" x2="3.6083" y2="-1.5636"/> <atom id="CH33ADO-atom4" elementType="C" x2="0.0" y2="-3.6197"/> <atom id="CH33ADO-atom5" elementType="N" x2="1.3304" y2="-9.5364"/> <atom id="CH33ADO-atom6" elementType="O" x2="0.7126" y2="0.0"/> <atom id="CH33ADO-atom7" elementType="O" x2="2.9135" y2="0.0"/> <atom id="CH33ADO-atom8" elementType="C" x2="0.23" y2="-6.2739"/> <atom id="CH33ADO-atom9" elementType="C" x2="4.6123" y2="-6.8341"/> <atom id="CH33ADO-atom10" elementType="N" x2="0.23" y2="-7.4707"/> <atom id="CH33ADO-atom11" elementType="N" x2="3.7435" y2="-8.1273"/> <atom id="CH33ADO-atom12" elementType="N" x2="1.4268" y2="-5.4826"/> <atom id="CH33ADO-atom13" elementType="O" x2="1.8519" y2="-3.2048"/> <atom id="CH33ADO-atom14" elementType="C" x2="1.3304" y2="-8.1273"/> <atom id="CH33ADO-atom15" elementType="C" x2="2.4503" y2="-7.5677"/> <atom id="CH33ADO-atom16" elementType="C" x2="2.4503" y2="-6.2357"/> <atom id="CH33ADO-atom17" elementType="C" x2="0.0372" y2="-2.2202"/> <atom id="CH33ADO-atom18" elementType="N" x2="3.6083" y2="-5.5984"/> <atom id="CH33ADO-atom19" elementType="C" x2="0.7126" y2="-0.8494"/> <atom id="CH33ADO-atom20" elementType="C" x2="2.9135" y2="-0.8494"/> <atom id="CH33ADO-atom21" elementType="C" x2="3.6083" y2="-2.413"/> <bond id="CH33ADO-bond1" atomRefs="CH33ADO-atom20 CH33ADO-atom21" order="1"/> <bond id="CH33ADO-bond2" atomRefs="CH33ADO-atom19 CH33ADO-atom20" order="1"/> <bond id="CH33ADO-bond3" atomRefs="CH33ADO-atom21 CH33ADO-atom18" order="1"/> <bond id="CH33ADO-bond4" atomRefs="CH33ADO-atom17 CH33ADO-atom19" order="1"/> <bond id="CH33ADO-bond5" atomRefs="CH33ADO-atom18 CH33ADO-atom16" order="A"/> <bond id="CH33ADO-bond6" atomRefs="CH33ADO-atom16 CH33ADO-atom15" order="A"/> <bond id="CH33ADO-bond7" atomRefs="CH33ADO-atom15 CH33ADO-atom14" order="A"/> <bond id="CH33ADO-bond8" atomR…

unificationXref24892
type: unificationXref
DB: CapCyc
ID: CH33ADO

unificationXref24891
type: unificationXref
DB: LIGAND
ID: C05198

unificationXref24888
type: unificationXref
DB: CapCyc
ID: 2.8.1.6-RXN

phys-ent-participant24876
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24874
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24874
type: protein
NAME: BIOTIN SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref24875

unificationXref24875
type: unificationXref
DB: CapCyc
ID: SGNU201146-MONOMER

unificationXref24903
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-473

catalysis24885
type: catalysis
CONTROLLED: biochemicalReaction24877
CONTROLLER: phys-ent-participant24876
NAME: BIOTIN SYNTHASE
XREF: unificationXref24886

biochemicalReaction24877
type: biochemicalReaction
EC-NUMBER: 2.8.1.6
LEFT: phys-ent-participant21315
LEFT: phys-ent-participant24884
NAME: RXN-5984
RIGHT: phys-ent-participant24865
XREF: unificationXref24878

phys-ent-participant24865
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24862
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24862
type: smallMolecule
MOLECULAR-WEIGHT: 246.324
NAME: 9-mercaptodethiobiotin
STRUCTURE: chemicalStructure24864
SYNONYMS: 9-mercaptodesthiobiotin
XREF: unificationXref24863

chemicalStructure24864
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-5662-atom1" elementType="C" x2="5.0875" y2="0.425"/> <atom id="CPD-5662-atom2" elementType="C" x2="5.6709" y2="1.0084"/> <atom id="CPD-5662-atom3" elementType="C" x2="6.2542" y2="0.425"/> <atom id="CPD-5662-atom4" elementType="C" x2="6.8376" y2="1.0084"/> <atom id="CPD-5662-atom5" elementType="C" x2="7.421" y2="0.425"/> <atom id="CPD-5662-atom6" elementType="O" x2="8.5877" y2="0.425"/> <atom id="CPD-5662-atom7" elementType="C" x2="8.0043" y2="1.0084"/> <atom id="CPD-5662-atom8" elementType="O" x2="8.0043" y2="1.8334"/> <atom id="CPD-5662-atom9" elementType="N" x2="4.2625" y2="1.25"/> <atom id="CPD-5662-atom10" elementType="C" x2="4.2625" y2="0.425"/> <atom id="CPD-5662-atom11" elementType="N" x2="2.875" y2="1.25"/> <atom id="CPD-5662-atom12" elementType="C" x2="3.5834" y2="1.9896"/> <atom id="CPD-5662-atom13" elementType="O" x2="3.5834" y2="2.8146"/> <atom id="CPD-5662-atom14" elementType="C" x2="2.875" y2="0.425"/> <atom id="CPD-5662-atom15" elementType="C" x2="2.05" y2="0.425"/> <atom id="CPD-5662-atom16" elementType="S" x2="1.6375" y2="-0.2895"/> <bond id="CPD-5662-bond1" atomRefs="CPD-5662-atom15 CPD-5662-atom16" order="1"/> <bond id="CPD-5662-bond2" atomRefs="CPD-5662-atom14 CPD-5662-atom15" order="1"/> <bond id="CPD-5662-bond3" atomRefs="CPD-5662-atom12 CPD-5662-atom13" order="2"/> <bond id="CPD-5662-bond4" atomRefs="CPD-5662-atom9 CPD-5662-atom12" order="1"/> <bond id="CPD-5662-bond5" atomRefs="CPD-5662-atom11 CPD-5662-atom12" order="1"/> <bond id="CPD-5662-bond6" atomRefs="CPD-5662-atom14 CPD-5662-atom11" order="1"/> <bond id="CPD-5662-bond7" atomRefs="CPD-5662-atom10 CPD-5662-atom14" order="1"/> <bond id="CPD-5662-bond8" atomRefs="CPD-5662-atom7 CPD-5662-atom8" order="1"/> <bond id="CPD-5662-bond9" atomRefs="CPD-5662-atom7 CPD-5662-atom6" order="2"/> <bond id="CPD-5662-bond10" atomRefs="CPD-5662-atom5 CPD-5662-atom7" order="1"/> <bond id="CPD-5662-bond11" atomRefs="CPD-5662-atom4 CPD-5662-atom5" order="1"/> <bond id="CPD-5662-bond12" atomRefs=…

unificationXref24863
type: unificationXref
DB: CapCyc
ID: CPD-5662

unificationXref24878
type: unificationXref
DB: CapCyc
ID: RXN-5984

unificationXref24886
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-474

catalysis24872
type: catalysis
CONTROLLED: biochemicalReaction24860
CONTROLLER: phys-ent-participant24876
NAME: BIOTIN SYNTHASE
XREF: unificationXref24873

biochemicalReaction24860
type: biochemicalReaction
EC-NUMBER: 2.8.1.6
LEFT: phys-ent-participant24865
NAME: RXN-5985
RIGHT: phys-ent-participant24871
XREF: unificationXref24861

unificationXref24861
type: unificationXref
DB: CapCyc
ID: RXN-5985

unificationXref24873
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-475

catalysis24790
type: catalysis
CONTROLLED: biochemicalReaction24774
CONTROLLER: phys-ent-participant24794
NAME: DIENELACTONE HYDROLASE
XREF: unificationXref24791

biochemicalReaction24774
type: biochemicalReaction
EC-NUMBER: 3.1.1.45
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24780
NAME: Carboxymethylenebutenolidase
RIGHT: phys-ent-participant24784
SYNONYMS: Maleylacetate enol-lactonase
SYNONYMS: Dienelactone hydrolase
XREF: unificationXref24775

phys-ent-participant24780
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24776
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24776
type: smallMolecule
MOLECULAR-WEIGHT: 140.095
NAME: 4-carboxymethylenebut-2-en-4-olide
STRUCTURE: chemicalStructure24779
SYNONYMS: cis-4-carboxymethylenebut-2-en-4-olide
XREF: unificationXref24778
XREF: unificationXref24777

chemicalStructure24779
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom1" elementType="O" x2="7.3001" y2="-1.802"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom2" elementType="O" x2="0.0" y2="-2.3062"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom3" elementType="O" x2="5.6775" y2="0.0"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom4" elementType="C" x2="4.9282" y2="-2.3062"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom5" elementType="C" x2="1.7641" y2="-0.5421"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom6" elementType="C" x2="3.1641" y2="-0.5421"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom7" elementType="O" x2="2.4641" y2="-2.6965"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom8" elementType="C" x2="5.9686" y2="-1.3694"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom9" elementType="C" x2="1.3315" y2="-1.8736"/> <atom id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom10" elementType="C" x2="3.5967" y2="-1.8736"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond1" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom7 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom10" order="1"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond2" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom7 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom9" order="1"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond3" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom6 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom10" order="1"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond4" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom5 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom9" order="1"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond5" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom5 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom6" order="2"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond6" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom4 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom10" order="2"/> <bond id="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-bond7" atomRefs="4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE-atom4 4-CARBOXY…

unificationXref24778
type: unificationXref
DB: CapCyc
ID: 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE

unificationXref24777
type: unificationXref
DB: CAS
ID: 3374-46-7

phys-ent-participant24784
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24781
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24781
type: smallMolecule
MOLECULAR-WEIGHT: 158.11
NAME: 4-oxohex-2-enedioate
STRUCTURE: chemicalStructure24783
SYNONYMS: 2-maleylacetate
SYNONYMS: maleylacetate
XREF: unificationXref24782

chemicalStructure24783
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OXOHEX-2-ENEDIOATE-atom1" elementType="O" x2="1.2124" y2="-5.6"/> <atom id="OXOHEX-2-ENEDIOATE-atom2" elementType="O" x2="4.8497" y2="-2.1"/> <atom id="OXOHEX-2-ENEDIOATE-atom3" elementType="O" x2="1.2125" y2="0.0"/> <atom id="OXOHEX-2-ENEDIOATE-atom4" elementType="O" x2="2.4249" y2="-3.5"/> <atom id="OXOHEX-2-ENEDIOATE-atom5" elementType="O" x2="3.6372" y2="0.0"/> <atom id="OXOHEX-2-ENEDIOATE-atom6" elementType="C" x2="0.0" y2="-3.5"/> <atom id="OXOHEX-2-ENEDIOATE-atom7" elementType="C" x2="0.0" y2="-2.1"/> <atom id="OXOHEX-2-ENEDIOATE-atom8" elementType="C" x2="2.4249" y2="-2.1"/> <atom id="OXOHEX-2-ENEDIOATE-atom9" elementType="C" x2="1.2124" y2="-4.2"/> <atom id="OXOHEX-2-ENEDIOATE-atom10" elementType="C" x2="3.6373" y2="-1.4"/> <atom id="OXOHEX-2-ENEDIOATE-atom11" elementType="C" x2="1.2125" y2="-1.4"/> <bond id="OXOHEX-2-ENEDIOATE-bond1" atomRefs="OXOHEX-2-ENEDIOATE-atom8 OXOHEX-2-ENEDIOATE-atom11" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond2" atomRefs="OXOHEX-2-ENEDIOATE-atom8 OXOHEX-2-ENEDIOATE-atom10" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond3" atomRefs="OXOHEX-2-ENEDIOATE-atom7 OXOHEX-2-ENEDIOATE-atom11" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond4" atomRefs="OXOHEX-2-ENEDIOATE-atom6 OXOHEX-2-ENEDIOATE-atom9" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond5" atomRefs="OXOHEX-2-ENEDIOATE-atom6 OXOHEX-2-ENEDIOATE-atom7" order="2"/> <bond id="OXOHEX-2-ENEDIOATE-bond6" atomRefs="OXOHEX-2-ENEDIOATE-atom5 OXOHEX-2-ENEDIOATE-atom10" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond7" atomRefs="OXOHEX-2-ENEDIOATE-atom4 OXOHEX-2-ENEDIOATE-atom9" order="1"/> <bond id="OXOHEX-2-ENEDIOATE-bond8" atomRefs="OXOHEX-2-ENEDIOATE-atom3 OXOHEX-2-ENEDIOATE-atom11" order="2"/> <bond id="OXOHEX-2-ENEDIOATE-bond9" atomRefs="OXOHEX-2-ENEDIOATE-atom2 OXOHEX-2-ENEDIOATE-atom10" order="2"/> <bond id="OXOHEX-2-ENEDIOATE-bond10" atomRefs="OXOHEX-2-ENEDIOATE-atom1 OXOHEX-2-ENEDIOATE-atom9" order="2"/> <formula concise="C 6 H 6 O 5" formalCharge="0"/> 158.11 C(=O)(O)C=CC(=O)…

unificationXref24782
type: unificationXref
DB: CapCyc
ID: OXOHEX-2-ENEDIOATE

unificationXref24775
type: unificationXref
DB: CapCyc
ID: CARBOXYMETHYLENEBUTENOLIDASE-RXN

unificationXref24791
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-85

catalysis24785
type: catalysis
CONTROLLED: biochemicalReaction24774
CONTROLLER: phys-ent-participant24789
NAME: DIENELACTONE HYDROLASE
XREF: unificationXref24786

unificationXref24786
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-744

catalysis24762
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24766
NAME: pectin methylesterase
XREF: unificationXref24763

biochemicalReaction24657
type: biochemicalReaction
EC-NUMBER: 3.1.1.11
LEFT: phys-ent-participant24660
LEFT: phys-ent-participant24666
NAME: Pectinesterase
RIGHT: phys-ent-participant24669
RIGHT: phys-ent-participant24671
SYNONYMS: Pectin methoxylase
SYNONYMS: Pectin demethoxylase
SYNONYMS: Pectin methylesterase
XREF: unificationXref24658

phys-ent-participant24660
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24659
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24659
type: smallMolecule
NAME: N H2O

phys-ent-participant24666
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24661
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24661
type: smallMolecule
NAME: pectin
SYNONYMS: poly (1,4-α-D-galacturonide)
XREF: unificationXref24665
XREF: unificationXref24664
XREF: unificationXref24663
XREF: unificationXref24662

unificationXref24665
type: unificationXref
DB: CapCyc
ID: PECTIN

unificationXref24664
type: unificationXref
DB: CAS
ID: 9000-69-5

unificationXref24663
type: unificationXref
DB: LIGAND
ID: C00714

unificationXref24662
type: unificationXref
DB: PubChem
ID: 451205

phys-ent-participant24669
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24667
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24667
type: smallMolecule
NAME: pectate
SYNONYMS: pectic acid
SYNONYMS: α-D-polygalacturonic acid
SYNONYMS: poly(1,4-α-D-galacturonate)
SYNONYMS: poly(1,4-α-D-galacturonate)(n)
XREF: unificationXref24668

unificationXref24668
type: unificationXref
DB: CapCyc
ID: PECTATE

phys-ent-participant24671
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24670
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24670
type: smallMolecule
NAME: N methanol

unificationXref24658
type: unificationXref
DB: CapCyc
ID: PECTINESTERASE-RXN

phys-ent-participant24766
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24764
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24764
type: protein
NAME: pectin methylesterase
ORGANISM: bioSource20982
XREF: unificationXref24765

unificationXref24765
type: unificationXref
DB: CapCyc
ID: SGNU196922-MONOMER

unificationXref24763
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-124

catalysis24757
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24761
NAME: PECTIN METHYLESTERASE
XREF: unificationXref24758

phys-ent-participant24761
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24759
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24759
type: protein
NAME: PECTIN METHYLESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24760

unificationXref24760
type: unificationXref
DB: CapCyc
ID: SGNU197469-MONOMER

unificationXref24758
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-184

catalysis24752
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24756
NAME: PECTIN METHYLESTERASE
XREF: unificationXref24753

phys-ent-participant24756
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24754
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24754
type: protein
NAME: PECTIN METHYLESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24755

unificationXref24755
type: unificationXref
DB: CapCyc
ID: SGNU197526-MONOMER

unificationXref24753
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-190

catalysis24747
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24751
NAME: PECTINESTERASE
XREF: unificationXref24748

phys-ent-participant24751
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24749
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24749
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24750

unificationXref24750
type: unificationXref
DB: CapCyc
ID: SGNU197686-MONOMER

unificationXref24748
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-213

catalysis24742
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24746
NAME: PECTINESTERASE
XREF: unificationXref24743

phys-ent-participant24746
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24744
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24744
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24745

unificationXref24745
type: unificationXref
DB: CapCyc
ID: SGNU197726-MONOMER

unificationXref24743
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-214

catalysis24737
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24741
NAME: PECTINESTERASE
XREF: unificationXref24738

phys-ent-participant24741
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24739
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24739
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24740

unificationXref24740
type: unificationXref
DB: CapCyc
ID: SGNU197757-MONOMER

unificationXref24738
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-221

catalysis24732
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24736
NAME: PECTIN METHYLESTERASE
XREF: unificationXref24733

phys-ent-participant24736
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24734
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24734
type: protein
NAME: PECTIN METHYLESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24735

unificationXref24735
type: unificationXref
DB: CapCyc
ID: SGNU197973-MONOMER

unificationXref24733
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-244

catalysis24727
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24731
NAME: PECTIN ESTERASE
XREF: unificationXref24728

phys-ent-participant24731
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24729
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24729
type: protein
NAME: PECTIN ESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24730

unificationXref24730
type: unificationXref
DB: CapCyc
ID: SGNU198100-MONOMER

unificationXref24728
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-259

catalysis24722
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24726
NAME: PECTINESTERASE
XREF: unificationXref24723

phys-ent-participant24726
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24724
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24724
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24725

unificationXref24725
type: unificationXref
DB: CapCyc
ID: SGNU198422-MONOMER

unificationXref24723
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-295

catalysis24717
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24721
NAME: PECTIN METHYLESTERASE
XREF: unificationXref24718

phys-ent-participant24721
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24719
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24719
type: protein
NAME: PECTIN METHYLESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24720

unificationXref24720
type: unificationXref
DB: CapCyc
ID: SGNU198423-MONOMER

unificationXref24718
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-296

catalysis24712
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24716
NAME: PECTINESTERASE
XREF: unificationXref24713

phys-ent-participant24716
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24714
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24714
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24715

unificationXref24715
type: unificationXref
DB: CapCyc
ID: SGNU200078-MONOMER

unificationXref24713
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-402

catalysis24707
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24711
NAME: PECTIN METHYLESTERASE
XREF: unificationXref24708

phys-ent-participant24711
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24709
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24709
type: protein
NAME: PECTIN METHYLESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24710

unificationXref24710
type: unificationXref
DB: CapCyc
ID: SGNU200304-MONOMER

unificationXref24708
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-416

catalysis24702
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24706
NAME: PECTINESTERASE
XREF: unificationXref24703

phys-ent-participant24706
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24704
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24704
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24705

unificationXref24705
type: unificationXref
DB: CapCyc
ID: SGNU200465-MONOMER

unificationXref24703
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-424

catalysis24697
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24701
NAME: PECTIN METHYL-ESTERASE
XREF: unificationXref24698

phys-ent-participant24701
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24699
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24699
type: protein
NAME: PECTIN METHYL-ESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24700

unificationXref24700
type: unificationXref
DB: CapCyc
ID: SGNU200510-MONOMER

unificationXref24698
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-428

catalysis24692
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24696
NAME: PECTINESTERASE
XREF: unificationXref24693

phys-ent-participant24696
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24694
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24694
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24695

unificationXref24695
type: unificationXref
DB: CapCyc
ID: SGNU200968-MONOMER

unificationXref24693
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-460

catalysis24687
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24691
NAME: PECTINESTERASE
XREF: unificationXref24688

phys-ent-participant24691
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24689
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24689
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24690

unificationXref24690
type: unificationXref
DB: CapCyc
ID: SGNU201581-MONOMER

unificationXref24688
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-510

catalysis24682
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24686
NAME: PECTINESTERASE
XREF: unificationXref24683

phys-ent-participant24686
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24684
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24684
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24685

unificationXref24685
type: unificationXref
DB: CapCyc
ID: SGNU201790-MONOMER

unificationXref24683
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-526

catalysis24677
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24681
NAME: PECTINESTERASE
XREF: unificationXref24678

phys-ent-participant24681
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24679
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24679
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24680

unificationXref24680
type: unificationXref
DB: CapCyc
ID: SGNU202058-MONOMER

unificationXref24678
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-544

catalysis24672
type: catalysis
CONTROLLED: biochemicalReaction24657
CONTROLLER: phys-ent-participant24676
NAME: PECTINESTERASE
XREF: unificationXref24673

phys-ent-participant24676
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24674
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24674
type: protein
NAME: PECTINESTERASE
ORGANISM: bioSource20982
XREF: unificationXref24675

unificationXref24675
type: unificationXref
DB: CapCyc
ID: SGNU204661-MONOMER

unificationXref24673
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-695

catalysis24655
type: catalysis
CONTROLLED: biochemicalReaction24645
CONTROLLER: phys-ent-participant24644
NAME: phospholipase A
XREF: unificationXref24656

biochemicalReaction24645
type: biochemicalReaction
EC-NUMBER: 3.1.1.4
LEFT: phys-ent-participant24365
LEFT: phys-ent-participant20951
NAME: Phospholipase A2
RIGHT: phys-ent-participant24650
RIGHT: phys-ent-participant24654
SYNONYMS: intracellular membrane-associated calcium-independent phospholipase A2 γ
SYNONYMS: Phosphatidolipase
SYNONYMS: Phosphatidase
SYNONYMS: Lecithinase A
SYNONYMS: Phosphatidylcholine 2-acylhydrolase
XREF: unificationXref24646

phys-ent-participant24365
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24360
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24360
type: smallMolecule
COMMENT: There are two variations of the molecular structure, and we've illustrated only one here. Either an end carbon or a middle carbon of the glycerol is attached to the phosphocholine, and each of the remaining two carbons of the glycerol is attached to a fatty acid.
NAME: a phosphatidylcholine
STRUCTURE: chemicalStructure24364
SYNONYMS: acyl-glycerophosphocholine
SYNONYMS: a choline phosphatide
SYNONYMS: a 1,2-diacyl-sn-glycero-3-phosphocholine
SYNONYMS: a phosphatidyl-N-trimethylethanolamine
SYNONYMS: a lecithin
XREF: unificationXref24363
XREF: unificationXref24362
XREF: unificationXref24361

chemicalStructure24364
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="PHOSPHATIDYLCHOLINE" title="a phosphatidylcholine" dictRef="dictPHOSPHATIDYLCHOLINE"> <atomArray> <atom id="PHOSPHATIDYLCHOLINE-atom1" elementType="C" x2="0.5973377" y2="-0.797005"/> <atom id="PHOSPHATIDYLCHOLINE-atom2" elementType="O" x2="-1.0" y2="-0.098169744"/> <atom id="PHOSPHATIDYLCHOLINE-atom3" elementType="C" x2="0.99667215" y2="-0.797005"/> <atom id="PHOSPHATIDYLCHOLINE-atom4" elementType="C" x2="-0.40765393" y2="-0.45424294"/> <atom id="PHOSPHATIDYLCHOLINE-atom5" elementType="O" x2="0.29450917" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom6" elementType="O" x2="-0.5108153" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom7" elementType="O" x2="0.09484196" y2="-0.8269551"/> <atom id="PHOSPHATIDYLCHOLINE-atom8" elementType="C" x2="-0.20798671" y2="-0.45424294"/> <atom id="PHOSPHATIDYLCHOLINE-atom9" elementType="N" x2="0.79700494" y2="-0.797005" formalCharge="1"/> <atom id="PHOSPHATIDYLCHOLINE-atom10" elementType="O" x2="-0.70382696" y2="-0.27787024"/> <atom id="PHOSPHATIDYLCHOLINE-atom11" elementType="O" x2="-0.10482532" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom12" elementType="O" x2="0.09484196" y2="-0.42429286"/> <atom id="PHOSPHATIDYLCHOLINE-atom13" elementType="R2" x2="-0.6971714" y2="0.07487512"/> <atom id="PHOSPHATIDYLCHOLINE-atom14" elementType="C" x2="-0.50415975" y2="-0.27787024"/> <atom id="PHOSPHATIDYLCHOLINE-atom15" elementType="P" x2="0.09484196" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom16" elementType="C" x2="-0.71048254" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom17" elementType="C" x2="0.4941764" y2="-0.6239601"/> <atom id="PHOSPHATIDYLCHOLINE-atom18" elementType="C" x2="0.79700494" y2="-0.5973378"/> <atom id="PHOSPHATIDYLCHOLINE-atom19" elementType="R1" x2="-0.80698836" y2="-0.44425958"/> <atom id="PHOSPHATIDYLCHOLINE-atom20" elementType="C" x2="-0.8003328" y2="-0.098169744"/> <atom id="PHOSPHATIDYLCHOLINE-atom21" elementType="O" x2="-0.81364393" y2="-0.7903494"/> <atom id="PHOSPHA…

unificationXref24363
type: unificationXref
DB: CapCyc
ID: PHOSPHATIDYLCHOLINE

unificationXref24362
type: unificationXref
DB: CAS
ID: 8002-43-5

unificationXref24361
type: unificationXref
DB: LIGAND
ID: C00157

phys-ent-participant24650
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24647
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24647
type: smallMolecule
COMMENT: Lysolecithins, or acyl-snglycero-3-phosphocholines, are derivatives of phosphatidylcholine, resulting from hydrolytic removal of one of the two acyl groups. The instances of this class include different variations based on the specific acyl group which has been removed. The structure below is an example of such an instance.
NAME: a 1-acyl-2-lyso-glycerophosphocholine
STRUCTURE: chemicalStructure24649
SYNONYMS: 1-lysolecithin
SYNONYMS: 1-lysophosphatidylcholine
SYNONYMS: α'-acylglycerophosphocholine
SYNONYMS: L-1-lysolecithin
XREF: unificationXref24648

chemicalStructure24649
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="1-Acylglycero-Phosphocholines" title="a 1-acyl-2-lyso-glycerophosphocholine" dictRef="dict1-Acylglycero-Phosphocholines"> <atomArray> <atom id="1-Acylglycero-Phosphocholines-atom1" elementType="C" x2="12.2718" y2="-4.933"/> <atom id="1-Acylglycero-Phosphocholines-atom2" elementType="C" x2="12.9724" y2="-3.3915"/> <atom id="1-Acylglycero-Phosphocholines-atom3" elementType="C" x2="10.2258" y2="-4.8769"/> <atom id="1-Acylglycero-Phosphocholines-atom4" elementType="O" x2="2.1265" y2="-6.2032"/> <atom id="1-Acylglycero-Phosphocholines-atom5" elementType="O" x2="7.4787" y2="-2.5786"/> <atom id="1-Acylglycero-Phosphocholines-atom6" elementType="O" x2="3.4182" y2="-1.3235"/> <atom id="1-Acylglycero-Phosphocholines-atom7" elementType="O" x2="7.4787" y2="0.0" formalCharge="-1"/> <atom id="1-Acylglycero-Phosphocholines-atom8" elementType="R" x2="0.0" y2="-5.0378"/> <atom id="1-Acylglycero-Phosphocholines-atom9" elementType="C" x2="9.3567" y2="-2.3263"/> <atom id="1-Acylglycero-Phosphocholines-atom10" elementType="C" x2="10.5899" y2="-2.3263"/> <atom id="1-Acylglycero-Phosphocholines-atom11" elementType="C" x2="3.4721" y2="-3.7478"/> <atom id="1-Acylglycero-Phosphocholines-atom12" elementType="C" x2="5.5446" y2="-2.4889"/> <atom id="1-Acylglycero-Phosphocholines-atom13" elementType="O" x2="2.0725" y2="-3.779"/> <atom id="1-Acylglycero-Phosphocholines-atom14" elementType="O" x2="8.7118" y2="-1.2331"/> <atom id="1-Acylglycero-Phosphocholines-atom15" elementType="O" x2="6.2175" y2="-1.2612"/> <atom id="1-Acylglycero-Phosphocholines-atom16" elementType="C" x2="1.3997" y2="-5.0067"/> <atom id="1-Acylglycero-Phosphocholines-atom17" elementType="C" x2="4.145" y2="-2.5201"/> <atom id="1-Acylglycero-Phosphocholines-atom18" elementType="N" x2="11.2067" y2="-3.3915" formalCharge="1"/> <atom id="1-Acylglycero-Phosphocholines-atom19" elementType="P" x2="7.4787" y2="-1.2331"/> </atomArray> <bondArray> <bond id="1-Acylglycero-Phosphocholines-bond1" atomRefs="1-Acylglycero-…

unificationXref24648
type: unificationXref
DB: CapCyc
ID: 1-Acylglycero-Phosphocholines

phys-ent-participant24654
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24651
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24651
type: smallMolecule
NAME: a carboxylate
STRUCTURE: chemicalStructure24653
SYNONYMS: carboxylic acid
SYNONYMS: carboxylate
XREF: unificationXref24652

chemicalStructure24653
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="Carboxylates" title="a carboxylate" dictRef="dictCarboxylates"> <atomArray> <atom id="Carboxylates-atom1" elementType="O" x2="1.1737" y2="-2.193"/> <atom id="Carboxylates-atom2" elementType="O" x2="2.3331" y2="-0.0388"/> <atom id="Carboxylates-atom3" elementType="R" x2="0.0" y2="0.0"/> <atom id="Carboxylates-atom4" elementType="C" x2="1.1537" y2="-0.7931"/> </atomArray> <bondArray> <bond id="Carboxylates-bond1" atomRefs="Carboxylates-atom3 Carboxylates-atom4" order="1"/> <bond id="Carboxylates-bond2" atomRefs="Carboxylates-atom2 Carboxylates-atom4" order="1"/> <bond id="Carboxylates-bond3" atomRefs="Carboxylates-atom1 Carboxylates-atom4" order="2"/> </bondArray> <formula concise="C 1 H 1 O 2 R 1" formalCharge="0"/> </molecule> </cml>

unificationXref24652
type: unificationXref
DB: CapCyc
ID: Carboxylates

unificationXref24646
type: unificationXref
DB: CapCyc
ID: PHOSPHOLIPASE-A2-RXN

phys-ent-participant24644
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24642
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24642
type: protein
NAME: phospholipase A
ORGANISM: bioSource20982
XREF: unificationXref24643

unificationXref24643
type: unificationXref
DB: CapCyc
ID: SGNU198133-MONOMER

unificationXref24656
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-264

catalysis24640
type: catalysis
CONTROLLED: biochemicalReaction24633
CONTROLLER: phys-ent-participant24644
NAME: phospholipase A
XREF: unificationXref24641

biochemicalReaction24633
type: biochemicalReaction
EC-NUMBER: 3.1.1.4
LEFT: phys-ent-participant24365
LEFT: phys-ent-participant20951
NAME: RXN-1501
RIGHT: phys-ent-participant24639
SYNONYMS: intracellular membrane-associated calcium-independent phospholipase A2 γ
XREF: unificationXref24634

unificationXref24634
type: unificationXref
DB: CapCyc
ID: RXN-1501

unificationXref24641
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-265

catalysis24622
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24626
NAME: LIPASE
XREF: unificationXref24623

biochemicalReaction24571
type: biochemicalReaction
EC-NUMBER: 3.1.1.3
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24576
NAME: Triacylglycerol lipase
RIGHT: phys-ent-participant21543
RIGHT: phys-ent-participant24420
SYNONYMS: HORMONE SENSITIVE LIPASE
SYNONYMS: Tributyrase
SYNONYMS: Triglyceride lipase
SYNONYMS: Lipase
XREF: unificationXref24572

phys-ent-participant24576
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24573
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24573
type: smallMolecule
NAME: triacylglycerol
STRUCTURE: chemicalStructure24575
SYNONYMS: Triglyceride
XREF: unificationXref24574

chemicalStructure24575
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="TRIACYLGLYCEROL" title="triacylglycerol" dictRef="dictTRIACYLGLYCEROL"> <atomArray> <atom id="TRIACYLGLYCEROL-atom1" elementType="O" x2="2.1434" y2="-1.2375"/> <atom id="TRIACYLGLYCEROL-atom2" elementType="O" x2="0.7145" y2="-2.8876"/> <atom id="TRIACYLGLYCEROL-atom3" elementType="R1" x2="2.858" y2="0.0"/> <atom id="TRIACYLGLYCEROL-atom4" elementType="R1" x2="2.1434" y2="-2.8876"/> <atom id="TRIACYLGLYCEROL-atom5" elementType="C" x2="0.0" y2="-1.65"/> <atom id="TRIACYLGLYCEROL-atom6" elementType="C" x2="0.7145" y2="-0.4125"/> <atom id="TRIACYLGLYCEROL-atom7" elementType="O" x2="1.4289" y2="0.0"/> <atom id="TRIACYLGLYCEROL-atom8" elementType="O" x2="1.4289" y2="-1.65"/> <atom id="TRIACYLGLYCEROL-atom9" elementType="C" x2="2.1434" y2="-0.4125"/> <atom id="TRIACYLGLYCEROL-atom10" elementType="C" x2="1.4289" y2="-2.4751"/> <atom id="TRIACYLGLYCEROL-atom11" elementType="C" x2="0.7145" y2="-1.2375"/> <atom id="TRIACYLGLYCEROL-atom12" elementType="O" x2="0.0" y2="-2.4751"/> <atom id="TRIACYLGLYCEROL-atom13" elementType="R3" x2="-1.4289" y2="-2.4751"/> <atom id="TRIACYLGLYCEROL-atom14" elementType="C" x2="-0.7145" y2="-2.9553"/> <atom id="TRIACYLGLYCEROL-atom15" elementType="O" x2="-0.7145" y2="-3.7803"/> </atomArray> <bondArray> <bond id="TRIACYLGLYCEROL-bond1" atomRefs="TRIACYLGLYCEROL-atom14 TRIACYLGLYCEROL-atom15" order="2"/> <bond id="TRIACYLGLYCEROL-bond2" atomRefs="TRIACYLGLYCEROL-atom14 TRIACYLGLYCEROL-atom13" order="1"/> <bond id="TRIACYLGLYCEROL-bond3" atomRefs="TRIACYLGLYCEROL-atom12 TRIACYLGLYCEROL-atom14" order="1"/> <bond id="TRIACYLGLYCEROL-bond4" atomRefs="TRIACYLGLYCEROL-atom11 TRIACYLGLYCEROL-atom8" order="1"/> <bond id="TRIACYLGLYCEROL-bond5" atomRefs="TRIACYLGLYCEROL-atom8 TRIACYLGLYCEROL-atom10" order="1"/> <bond id="TRIACYLGLYCEROL-bond6" atomRefs="TRIACYLGLYCEROL-atom7 TRIACYLGLYCEROL-atom9" order="1"/> <bond id="TRIACYLGLYCEROL-bond7" atomRefs="TRIACYLGLYCEROL-atom6 TRIACYLGLYCEROL-atom11" order="1"/> <bond id="TRIACYLGLYCEROL-bon…

unificationXref24574
type: unificationXref
DB: CapCyc
ID: TRIACYLGLYCEROL

unificationXref24572
type: unificationXref
DB: CapCyc
ID: TRIACYLGLYCEROL-LIPASE-RXN

phys-ent-participant24626
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24624
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24624
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24625

unificationXref24625
type: unificationXref
DB: CapCyc
ID: SGNU196438-MONOMER

unificationXref24623
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-61

catalysis24617
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24621
NAME: LIPASE
XREF: unificationXref24618

phys-ent-participant24621
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24619
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24619
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24620

unificationXref24620
type: unificationXref
DB: CapCyc
ID: SGNU198158-MONOMER

unificationXref24618
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-270

catalysis24612
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24616
NAME: TRIACYLGLYCEROL LIPASE
XREF: unificationXref24613

phys-ent-participant24616
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24614
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24614
type: protein
NAME: TRIACYLGLYCEROL LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24615

unificationXref24615
type: unificationXref
DB: CapCyc
ID: SGNU199894-MONOMER

unificationXref24613
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-385

catalysis24607
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24611
NAME: TRIACYLGLYCEROL LIPASE
XREF: unificationXref24608

phys-ent-participant24611
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24609
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24609
type: protein
NAME: TRIACYLGLYCEROL LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24610

unificationXref24610
type: unificationXref
DB: CapCyc
ID: SGNU200661-MONOMER

unificationXref24608
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-438

catalysis24602
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24606
NAME: LIPASE
XREF: unificationXref24603

phys-ent-participant24606
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24604
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24604
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24605

unificationXref24605
type: unificationXref
DB: CapCyc
ID: SGNU200678-MONOMER

unificationXref24603
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-439

catalysis24597
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24601
NAME: LIPASE
XREF: unificationXref24598

phys-ent-participant24601
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24599
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24599
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24600

unificationXref24600
type: unificationXref
DB: CapCyc
ID: SGNU201600-MONOMER

unificationXref24598
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-512

catalysis24592
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24596
NAME: LIPASE
XREF: unificationXref24593

phys-ent-participant24596
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24594
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24594
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24595

unificationXref24595
type: unificationXref
DB: CapCyc
ID: SGNU203052-MONOMER

unificationXref24593
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-592

catalysis24587
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24591
NAME: LIPASE
XREF: unificationXref24588

phys-ent-participant24591
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24589
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24589
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24590

unificationXref24590
type: unificationXref
DB: CapCyc
ID: SGNU203081-MONOMER

unificationXref24588
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-593

catalysis24582
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24586
NAME: TRIACYLGLYCEROL LIPASE
XREF: unificationXref24583

phys-ent-participant24586
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24584
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24584
type: protein
NAME: TRIACYLGLYCEROL LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24585

unificationXref24585
type: unificationXref
DB: CapCyc
ID: SGNU204625-MONOMER

unificationXref24583
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-694

catalysis24577
type: catalysis
CONTROLLED: biochemicalReaction24571
CONTROLLER: phys-ent-participant24581
NAME: LIPASE
XREF: unificationXref24578

phys-ent-participant24581
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24579
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24579
type: protein
NAME: LIPASE
ORGANISM: bioSource20982
XREF: unificationXref24580

unificationXref24580
type: unificationXref
DB: CapCyc
ID: SGNU204864-MONOMER

unificationXref24578
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-706

catalysis24473
type: catalysis
CONTROLLED: biochemicalReaction24459
CONTROLLER: phys-ent-participant24477
NAME: 3-PHOSPHOSERINE PHOSPHATASE
XREF: unificationXref24474

biochemicalReaction24459
type: biochemicalReaction
EC-NUMBER: 3.1.3.3
LEFT: phys-ent-participant24467
LEFT: phys-ent-participant20951
NAME: Phosphoserine phosphatase
RIGHT: phys-ent-participant22612
RIGHT: phys-ent-participant20970
SYNONYMS: L-3-phosphoserine phosphatase homolog
XREF: unificationXref24460

phys-ent-participant24467
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24461
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24461
type: smallMolecule
MOLECULAR-WEIGHT: 185.073
NAME: 3-phospho-serine
STRUCTURE: chemicalStructure24466
SYNONYMS: O-phospho-L-serine
SYNONYMS: serine phosphate
SYNONYMS: phosphorylserine
SYNONYMS: seryl phosphate
SYNONYMS: 3-P-serine
SYNONYMS: serine-3-p
SYNONYMS: serine-3-phosphate
SYNONYMS: phosphoserine
SYNONYMS: P-serine
SYNONYMS: 3-phospho-1-serine
SYNONYMS: P-ser
SYNONYMS: 3-phosphoserine
XREF: unificationXref24465
XREF: unificationXref24464
XREF: unificationXref24463
XREF: unificationXref24462

chemicalStructure24466
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-P-SERINE-atom1" elementType="O" x2="0.04" y2="0.04923"/> <atom id="3-P-SERINE-atom2" elementType="O" x2="0.51385" y2="0.52308"/> <atom id="3-P-SERINE-atom3" elementType="P" x2="0.04" y2="0.52308"/> <atom id="3-P-SERINE-atom4" elementType="O" x2="0.04" y2="0.99692"/> <atom id="3-P-SERINE-atom5" elementType="C" x2="-1.0" y2="0.52308"/> <atom id="3-P-SERINE-atom6" elementType="C" x2="-1.0" y2="-0.01846"/> <atom id="3-P-SERINE-atom7" elementType="N" x2="-0.52615" y2="-0.01846"/> <atom id="3-P-SERINE-atom8" elementType="O" x2="-0.52615" y2="-0.52615"/> <atom id="3-P-SERINE-atom9" elementType="C" x2="-1.0" y2="-0.52615"/> <atom id="3-P-SERINE-atom10" elementType="O" x2="-1.0" y2="-1.0"/> <atom id="3-P-SERINE-atom11" elementType="O" x2="-0.50769" y2="0.52308"/> <bond id="3-P-SERINE-bond1" atomRefs="3-P-SERINE-atom11 3-P-SERINE-atom3" order="1"/> <bond id="3-P-SERINE-bond2" atomRefs="3-P-SERINE-atom10 3-P-SERINE-atom9" order="1"/> <bond id="3-P-SERINE-bond3" atomRefs="3-P-SERINE-atom9 3-P-SERINE-atom6" order="1"/> <bond id="3-P-SERINE-bond4" atomRefs="3-P-SERINE-atom8 3-P-SERINE-atom9" order="2"/> <bond id="3-P-SERINE-bond5" atomRefs="3-P-SERINE-atom7 3-P-SERINE-atom6" order="1"/> <bond id="3-P-SERINE-bond6" atomRefs="3-P-SERINE-atom6 3-P-SERINE-atom5" order="1"/> <bond id="3-P-SERINE-bond7" atomRefs="3-P-SERINE-atom5 3-P-SERINE-atom11" order="1"/> <bond id="3-P-SERINE-bond8" atomRefs="3-P-SERINE-atom4 3-P-SERINE-atom3" order="2"/> <bond id="3-P-SERINE-bond9" atomRefs="3-P-SERINE-atom2 3-P-SERINE-atom3" order="1"/> <bond id="3-P-SERINE-bond10" atomRefs="3-P-SERINE-atom1 3-P-SERINE-atom3" order="1"/> <formula concise="C 3 H 8 N 1 O 6 P 1" formalCharge="0"/> 185.073 C(C(N)C(O)=O)OP(O)(=O)O

unificationXref24465
type: unificationXref
DB: CapCyc
ID: 3-P-SERINE

unificationXref24464
type: unificationXref
DB: CAS
ID: 17885-08-4

unificationXref24463
type: unificationXref
DB: LIGAND
ID: C01005

unificationXref24462
type: unificationXref
DB: CAS
ID: 407-41-0

unificationXref24460
type: unificationXref
DB: CapCyc
ID: PSERPHOSPHA-RXN

phys-ent-participant24477
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24475
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24475
type: protein
NAME: 3-PHOSPHOSERINE PHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref24476

unificationXref24476
type: unificationXref
DB: CapCyc
ID: SGNU196998-MONOMER

unificationXref24474
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-131

catalysis24468
type: catalysis
CONTROLLED: biochemicalReaction24459
CONTROLLER: phys-ent-participant24472
NAME: 3-PHOSPHOSERINE PHOSPHATASE
XREF: unificationXref24469

phys-ent-participant24472
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24470
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24470
type: protein
NAME: 3-PHOSPHOSERINE PHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref24471

unificationXref24471
type: unificationXref
DB: CapCyc
ID: SGNU199190-MONOMER

unificationXref24469
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-748

catalysis24450
type: catalysis
CONTROLLED: biochemicalReaction24437
CONTROLLER: phys-ent-participant24454
NAME: SEDOHEPTULOSE-BISPHOSPHATASE
XREF: unificationXref24451

biochemicalReaction24437
type: biochemicalReaction
EC-NUMBER: 3.1.3.37
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant23173
NAME: Sedoheptulose-bisphosphatase
RIGHT: phys-ent-participant20970
RIGHT: phys-ent-participant24444
SYNONYMS: Sedoheptulose-1,7-bisphosphatase
XREF: unificationXref24438

phys-ent-participant23173
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23170
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23170
type: smallMolecule
MOLECULAR-WEIGHT: 370.143
NAME: D-sedoheptulose-1,7-bisphosphate
STRUCTURE: chemicalStructure23172
SYNONYMS: sedoheptulose 1,7-bisphosphate
SYNONYMS: D-sedoheptulose-1,7-diphosphate
SYNONYMS: D-sedoheptulose-1,7-P2
XREF: unificationXref23171

chemicalStructure23172
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="d-sedoheptulose-1,7-p_{2}-atom1" elementType="C" x2="2.6083" y2="-1.7208"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom2" elementType="C" x2="2.6083" y2="-0.3083"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom3" elementType="C" x2="2.6083" y2="0.4417"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom4" elementType="C" x2="2.6083" y2="1.1917"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom5" elementType="O" x2="3.3583" y2="-0.3083"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom6" elementType="O" x2="1.8583" y2="0.4417"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom7" elementType="C" x2="2.6083" y2="1.9417"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom8" elementType="O" x2="3.3583" y2="1.1917"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom9" elementType="O" x2="3.3583" y2="1.9417"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom10" elementType="C" x2="2.6083" y2="2.6917"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom11" elementType="O" x2="3.3583" y2="2.6917"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom12" elementType="C" x2="2.6083" y2="3.4417"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom13" elementType="O" x2="1.9819" y2="3.8615"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom14" elementType="P" x2="1.2134" y2="3.8741"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom15" elementType="O" x2="1.2147" y2="4.8573"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom16" elementType="O" x2="1.2021" y2="3.0534"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom17" elementType="O" x2="0.304" y2="3.8584"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom18" elementType="O" x2="3.2594" y2="-2.0982"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom19" elementType="P" x2="4.0094" y2="-2.0948"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom20" elementType="O" x2="4.8485" y2="-2.1231"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom21" elementType="O" x2="4.02" y2="-1.1608"/> <atom id="d-sedoheptulose-1,7-p_{2}-atom22" elementType="O" x2="3.98" y2="-3.0421"/> <bond id="d-sedoheptulose-1,7-p_{2}-bond1" atomRefs="d-sedoheptulose-1,7-p_{2}-atom19 d-sedoheptulose-1,7-p_{2}-at…

unificationXref23171
type: unificationXref
DB: CapCyc
ID: d-sedoheptulose-1,7-p_{2}

unificationXref24438
type: unificationXref
DB: CapCyc
ID: SEDOHEPTULOSE-BISPHOSPHATASE-RXN

phys-ent-participant24454
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24452
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24452
type: protein
NAME: SEDOHEPTULOSE-BISPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref24453

unificationXref24453
type: unificationXref
DB: CapCyc
ID: SGNU197442-MONOMER

unificationXref24451
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-181

catalysis24445
type: catalysis
CONTROLLED: biochemicalReaction24437
CONTROLLER: phys-ent-participant24449
NAME: SEDOHEPTULOSE-BISPHOSPHATASE
XREF: unificationXref24446

phys-ent-participant24449
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24447
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24447
type: protein
NAME: SEDOHEPTULOSE-BISPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref24448

unificationXref24448
type: unificationXref
DB: CapCyc
ID: SGNU204376-MONOMER

unificationXref24446
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-680

catalysis24432
type: catalysis
CONTROLLED: biochemicalReaction24429
CONTROLLER: phys-ent-participant24436
NAME: TREHALOSE-6-PHOSPHATE PHOSPHATASE
XREF: unificationXref24433

biochemicalReaction24429
type: biochemicalReaction
EC-NUMBER: 3.1.3.12
LEFT: phys-ent-participant24431
LEFT: phys-ent-participant20951
NAME: Trehalose-phosphatase
RIGHT: phys-ent-participant24309
RIGHT: phys-ent-participant20970
SYNONYMS: Trehalose 6-phosphate phosphatase
XREF: unificationXref24430

phys-ent-participant24309
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20872
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20872
type: smallMolecule
MOLECULAR-WEIGHT: 342.299
NAME: trehalose
STRUCTURE: chemicalStructure20876
SYNONYMS: α,α-trehalose
XREF: unificationXref20875
XREF: unificationXref20874
XREF: unificationXref20873

chemicalStructure20876
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="TREHALOSE-atom1" elementType="C" x2="3.5798" y2="3.6116"/> <atom id="TREHALOSE-atom2" elementType="C" x2="3.5798" y2="4.4395"/> <atom id="TREHALOSE-atom3" elementType="C" x2="2.8707" y2="4.858"/> <atom id="TREHALOSE-atom4" elementType="C" x2="2.1526" y2="4.4395"/> <atom id="TREHALOSE-atom5" elementType="C" x2="2.1526" y2="3.6116"/> <atom id="TREHALOSE-atom6" elementType="O" x2="2.8707" y2="3.2022"/> <atom id="TREHALOSE-atom7" elementType="C" x2="4.2889" y2="3.2022"/> <atom id="TREHALOSE-atom8" elementType="O" x2="2.873" y2="5.6767"/> <atom id="TREHALOSE-atom9" elementType="O" x2="4.2908" y2="4.8455"/> <atom id="TREHALOSE-atom10" elementType="O" x2="1.1171" y2="3.0047"/> <atom id="TREHALOSE-atom11" elementType="O" x2="1.4427" y2="4.6428"/> <atom id="TREHALOSE-atom12" elementType="O" x2="4.9979" y2="3.6116"/> <atom id="TREHALOSE-atom13" elementType="C" x2="-1.4146" y2="3.6116"/> <atom id="TREHALOSE-atom14" elementType="C" x2="-1.4146" y2="4.4395"/> <atom id="TREHALOSE-atom15" elementType="C" x2="-0.7056" y2="4.858"/> <atom id="TREHALOSE-atom16" elementType="C" x2="0.0126" y2="4.4395"/> <atom id="TREHALOSE-atom17" elementType="C" x2="0.0126" y2="3.6116"/> <atom id="TREHALOSE-atom18" elementType="O" x2="-0.7056" y2="3.2022"/> <atom id="TREHALOSE-atom19" elementType="C" x2="-2.1237" y2="3.2022"/> <atom id="TREHALOSE-atom20" elementType="O" x2="-0.7078" y2="5.6767"/> <atom id="TREHALOSE-atom21" elementType="O" x2="-2.1256" y2="4.8455"/> <atom id="TREHALOSE-atom22" elementType="O" x2="0.6269" y2="5.234"/> <atom id="TREHALOSE-atom23" elementType="O" x2="-2.8328" y2="3.6116"/> <bond id="TREHALOSE-bond1" atomRefs="TREHALOSE-atom1 TREHALOSE-atom6" order="1"/> <bond id="TREHALOSE-bond2" atomRefs="TREHALOSE-atom1 TREHALOSE-atom2" order="1"/> <bond id="TREHALOSE-bond3" atomRefs="TREHALOSE-atom2 TREHALOSE-atom3" order="1"/> <bond id="TREHALOSE-bond4" atomRefs="TREHALOSE-atom3 TREHALOSE-atom4" order="1"/> <bond id="TREHALOSE-bond5" atomRefs="TREHALOSE-atom4 TREHALOSE-atom…

unificationXref20875
type: unificationXref
DB: CapCyc
ID: TREHALOSE

unificationXref20874
type: unificationXref
DB: CAS
ID: 99-20-7

unificationXref20873
type: unificationXref
DB: LIGAND
ID: C01083

unificationXref24430
type: unificationXref
DB: CapCyc
ID: TREHALOSEPHOSPHA-RXN

phys-ent-participant24436
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24434
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24434
type: protein
NAME: TREHALOSE-6-PHOSPHATE PHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref24435

unificationXref24435
type: unificationXref
DB: CapCyc
ID: SGNU199980-MONOMER

unificationXref24433
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-391

catalysis24398
type: catalysis
CONTROLLED: biochemicalReaction24387
CONTROLLER: phys-ent-participant24386
NAME: phospholipase D
XREF: unificationXref24399

biochemicalReaction24387
type: biochemicalReaction
EC-NUMBER: 3.1.4.4
LEFT: phys-ent-participant24365
LEFT: phys-ent-participant20951
NAME: Phospholipase D
RIGHT: phys-ent-participant24393
RIGHT: phys-ent-participant24371
SYNONYMS: Choline phosphatase
SYNONYMS: Lecithinase D
SYNONYMS: Lipophosphodiesterase II
XREF: unificationXref24388

phys-ent-participant24371
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24366
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24366
type: smallMolecule
MOLECULAR-WEIGHT: 104.172
NAME: choline
STRUCTURE: chemicalStructure24370
XREF: unificationXref24369
XREF: unificationXref24368
XREF: unificationXref24367

chemicalStructure24370
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CHOLINE-atom1" elementType="C" x2="0.8160535" y2="0.06688964"/> <atom id="CHOLINE-atom2" elementType="C" x2="0.99665546" y2="-0.6956522"/> <atom id="CHOLINE-atom3" elementType="O" x2="-1.0" y2="-0.70234114"/> <atom id="CHOLINE-atom4" elementType="C" x2="-0.4882943" y2="-0.4147157"/> <atom id="CHOLINE-atom5" elementType="C" x2="-0.0066889524" y2="-0.6923077"/> <atom id="CHOLINE-atom6" elementType="N" x2="0.4816053" y2="-0.4147157" formalCharge="1"/> <atom id="CHOLINE-atom7" elementType="C" x2="0.4816053" y2="-1.0"/> <bond id="CHOLINE-bond1" atomRefs="CHOLINE-atom7 CHOLINE-atom6" order="1"/> <bond id="CHOLINE-bond2" atomRefs="CHOLINE-atom5 CHOLINE-atom6" order="1"/> <bond id="CHOLINE-bond3" atomRefs="CHOLINE-atom4 CHOLINE-atom5" order="1"/> <bond id="CHOLINE-bond4" atomRefs="CHOLINE-atom3 CHOLINE-atom4" order="1"/> <bond id="CHOLINE-bond5" atomRefs="CHOLINE-atom2 CHOLINE-atom6" order="1"/> <bond id="CHOLINE-bond6" atomRefs="CHOLINE-atom1 CHOLINE-atom6" order="1"/> <formula concise="C 5 H 14 N 1 O 1" formalCharge="0"/> 104.172 C(O)C[N+](C)(C)C

unificationXref24369
type: unificationXref
DB: CapCyc
ID: CHOLINE

unificationXref24368
type: unificationXref
DB: CAS
ID: 62-49-7

unificationXref24367
type: unificationXref
DB: LIGAND
ID: C00114

unificationXref24388
type: unificationXref
DB: CapCyc
ID: PHOSCHOL-RXN

phys-ent-participant24386
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24384
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24384
type: protein
NAME: phospholipase D
ORGANISM: bioSource20982
XREF: unificationXref24385

unificationXref24385
type: unificationXref
DB: CapCyc
ID: SGNU199918-MONOMER

unificationXref24399
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-387

catalysis24396
type: catalysis
CONTROLLED: biochemicalReaction24387
CONTROLLER: phys-ent-participant24381
NAME: phospholipase D
XREF: unificationXref24397

phys-ent-participant24381
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24379
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24379
type: protein
NAME: phospholipase D
ORGANISM: bioSource20982
XREF: unificationXref24380

unificationXref24380
type: unificationXref
DB: CapCyc
ID: SGNU202993-MONOMER

unificationXref24397
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-591

catalysis24394
type: catalysis
CONTROLLED: biochemicalReaction24387
CONTROLLER: phys-ent-participant24376
NAME: phospholipase D
XREF: unificationXref24395

phys-ent-participant24376
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24374
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24374
type: protein
NAME: phospholipase D
ORGANISM: bioSource20982
XREF: unificationXref24375

unificationXref24375
type: unificationXref
DB: CapCyc
ID: SGNU204352-MONOMER

unificationXref24395
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-678

catalysis24382
type: catalysis
CONTROLLED: biochemicalReaction24358
CONTROLLER: phys-ent-participant24386
NAME: phospholipase D
XREF: unificationXref24383

biochemicalReaction24358
type: biochemicalReaction
EC-NUMBER: 3.1.4.4
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24365
NAME: Phospholipase D
RIGHT: phys-ent-participant24371
SYNONYMS: Choline phosphatase
SYNONYMS: Lecithinase D
SYNONYMS: Lipophosphodiesterase II
XREF: unificationXref24359

unificationXref24359
type: unificationXref
DB: CapCyc
ID: PHOSPHOLIPASE-D-RXN

unificationXref24383
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-386

catalysis24377
type: catalysis
CONTROLLED: biochemicalReaction24358
CONTROLLER: phys-ent-participant24381
NAME: phospholipase D
XREF: unificationXref24378

unificationXref24378
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-590

catalysis24372
type: catalysis
CONTROLLED: biochemicalReaction24358
CONTROLLER: phys-ent-participant24376
NAME: phospholipase D
XREF: unificationXref24373

unificationXref24373
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-677

catalysis24335
type: catalysis
CONTROLLED: biochemicalReaction24318
CONTROLLER: phys-ent-participant24339
NAME: UDP-sulfoquinovose synthase
XREF: unificationXref24336

biochemicalReaction24318
type: biochemicalReaction
EC-NUMBER: 3.13.1.1
LEFT: phys-ent-participant22187
LEFT: phys-ent-participant24325
NAME: RXN-1223
RIGHT: phys-ent-participant24329
RIGHT: phys-ent-participant20951
XREF: unificationXref24319

unificationXref24319
type: unificationXref
DB: CapCyc
ID: RXN-1223

phys-ent-participant24339
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24337
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24337
type: protein
NAME: UDP-sulfoquinovose synthase
ORGANISM: bioSource20982
XREF: unificationXref24338

unificationXref24338
type: unificationXref
DB: CapCyc
ID: SGNU200608-MONOMER

unificationXref24336
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-431

catalysis24330
type: catalysis
CONTROLLED: biochemicalReaction24318
CONTROLLER: phys-ent-participant24334
NAME: UDP-sulfoquinovose synthase
XREF: unificationXref24331

phys-ent-participant24334
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24332
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24332
type: protein
NAME: UDP-sulfoquinovose synthase
ORGANISM: bioSource20982
XREF: unificationXref24333

unificationXref24333
type: unificationXref
DB: CapCyc
ID: SGNU200759-MONOMER

unificationXref24331
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-445

catalysis24316
type: catalysis
CONTROLLED: biochemicalReaction24307
CONTROLLER: phys-ent-participant24153
NAME: ALPHA-AMYLASE
XREF: unificationXref24317

biochemicalReaction24307
type: biochemicalReaction
EC-NUMBER: 3.2.1.141
LEFT: phys-ent-participant21775
NAME: 4-alpha-D-{(1->4)-alpha-D-glucano}-trehalose trehalohydrolase
RIGHT: phys-ent-participant21772
RIGHT: phys-ent-participant24309
SYNONYMS: Malto-oligosyltrehalose trehalohydrolase
XREF: unificationXref24308

phys-ent-participant21775
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21773
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21773
type: smallMolecule
NAME: maltooligosyl-trehalose
SYNONYMS: 1-α-D-{(1,4)-α-D-glucosyl}(n-1)-α-D-glucopyranoside
XREF: unificationXref21774

unificationXref21774
type: unificationXref
DB: CapCyc
ID: MALTOOLIGOSYLTREHALOSE

unificationXref24308
type: unificationXref
DB: CapCyc
ID: 3.2.1.141-RXN

phys-ent-participant24153
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24151
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24151
type: protein
NAME: ALPHA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24152

unificationXref24152
type: unificationXref
DB: CapCyc
ID: SGNU197984-MONOMER

unificationXref24317
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-249

catalysis24314
type: catalysis
CONTROLLED: biochemicalReaction24307
CONTROLLER: phys-ent-participant24148
NAME: ALPHA-AMYLASE
XREF: unificationXref24315

phys-ent-participant24148
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24146
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24146
type: protein
NAME: ALPHA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24147

unificationXref24147
type: unificationXref
DB: CapCyc
ID: SGNU199996-MONOMER

unificationXref24315
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-398

catalysis24312
type: catalysis
CONTROLLED: biochemicalReaction24307
CONTROLLER: phys-ent-participant24143
NAME: ALPHA-AMYLASE
XREF: unificationXref24313

phys-ent-participant24143
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24141
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24141
type: protein
NAME: ALPHA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24142

unificationXref24142
type: unificationXref
DB: CapCyc
ID: SGNU201699-MONOMER

unificationXref24313
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-521

catalysis24310
type: catalysis
CONTROLLED: biochemicalReaction24307
CONTROLLER: phys-ent-participant24138
NAME: ALPHA-AMYLASE
XREF: unificationXref24311

phys-ent-participant24138
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24136
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24136
type: protein
NAME: ALPHA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24137

unificationXref24137
type: unificationXref
DB: CapCyc
ID: SGNU205567-MONOMER

unificationXref24311
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-731

catalysis24305
type: catalysis
CONTROLLED: biochemicalReaction24295
CONTROLLER: phys-ent-participant24128
NAME: BETA-AMYLASE
XREF: unificationXref24306

biochemicalReaction24295
type: biochemicalReaction
EC-NUMBER: 3.2.1.2
LEFT: phys-ent-participant24179
LEFT: phys-ent-participant20951
NAME: beta-amylase
RIGHT: phys-ent-participant24089
SYNONYMS: Glycogenase
SYNONYMS: Saccharogen amylase
SYNONYMS: 1,4-α-D-glucan maltohydrolase
XREF: unificationXref24296

phys-ent-participant24089
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24083
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24083
type: smallMolecule
COMMENT: Maltose is two glucose molecules linked by an α-1,4-glycosidic linkage. Maltose comes from the hydrolysis of starch and is in turn hydrolyzed to glucose by the enzyme maltase.
MOLECULAR-WEIGHT: 342.299
NAME: maltose
STRUCTURE: chemicalStructure24088
SYNONYMS: β-maltose
SYNONYMS: maltitol
XREF: unificationXref24087
XREF: unificationXref24086
XREF: unificationXref24085
XREF: publicationXref24084

chemicalStructure24088
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MALTOSE-atom1" elementType="C" x2="-4.3082" y2="0.8375"/> <atom id="MALTOSE-atom2" elementType="C" x2="-4.3082" y2="1.6625"/> <atom id="MALTOSE-atom3" elementType="C" x2="-3.5938" y2="2.075"/> <atom id="MALTOSE-atom4" elementType="C" x2="-2.8793" y2="1.6625"/> <atom id="MALTOSE-atom5" elementType="C" x2="-2.8793" y2="0.8375"/> <atom id="MALTOSE-atom6" elementType="C" x2="-5.0227" y2="0.425"/> <atom id="MALTOSE-atom7" elementType="C" x2="-1.4503" y2="0.0125"/> <atom id="MALTOSE-atom8" elementType="C" x2="-1.4503" y2="-0.8125"/> <atom id="MALTOSE-atom9" elementType="C" x2="-0.7359" y2="0.425"/> <atom id="MALTOSE-atom10" elementType="C" x2="-0.0214" y2="0.0125"/> <atom id="MALTOSE-atom11" elementType="C" x2="-0.0214" y2="-0.8125"/> <atom id="MALTOSE-atom12" elementType="O" x2="-2.1648" y2="0.425"/> <atom id="MALTOSE-atom13" elementType="C" x2="-2.1648" y2="-1.225"/> <atom id="MALTOSE-atom14" elementType="O" x2="-3.5938" y2="0.425"/> <atom id="MALTOSE-atom15" elementType="O" x2="-0.7359" y2="-1.225"/> <atom id="MALTOSE-atom16" elementType="O" x2="-2.8793" y2="-0.8125"/> <atom id="MALTOSE-atom17" elementType="O" x2="-5.7372" y2="0.8375"/> <atom id="MALTOSE-atom18" elementType="O" x2="-5.0227" y2="2.075"/> <atom id="MALTOSE-atom19" elementType="O" x2="-3.5938" y2="2.9"/> <atom id="MALTOSE-atom20" elementType="O" x2="-2.1648" y2="2.075"/> <atom id="MALTOSE-atom21" elementType="O" x2="-0.7359" y2="1.25"/> <atom id="MALTOSE-atom22" elementType="O" x2="0.6931" y2="0.425"/> <atom id="MALTOSE-atom23" elementType="O" x2="0.6931" y2="-1.225"/> <bond id="MALTOSE-bond1" atomRefs="MALTOSE-atom11 MALTOSE-atom23" order="1"/> <bond id="MALTOSE-bond2" atomRefs="MALTOSE-atom10 MALTOSE-atom22" order="1"/> <bond id="MALTOSE-bond3" atomRefs="MALTOSE-atom9 MALTOSE-atom21" order="1"/> <bond id="MALTOSE-bond4" atomRefs="MALTOSE-atom13 MALTOSE-atom16" order="1"/> <bond id="MALTOSE-bond5" atomRefs="MALTOSE-atom8 MALTOSE-atom13" order="1"/> <bond id="MALTOSE-bond6" atomRefs="MALTOSE-ato…

unificationXref24087
type: unificationXref
DB: CapCyc
ID: MALTOSE

unificationXref24086
type: unificationXref
DB: CAS
ID: 69-79-4

unificationXref24085
type: unificationXref
DB: LIGAND
ID: C00208

publicationXref24084
type: publicationXref
AUTHORS: Stryer L
SOURCE: WH Freeman and Co., 3rd edition, New York, 1988
TITLE: Biochemistry

unificationXref24296
type: unificationXref
DB: CapCyc
ID: 3.2.1.2-RXN

phys-ent-participant24128
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24126
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24126
type: protein
NAME: BETA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24127

unificationXref24127
type: unificationXref
DB: CapCyc
ID: SGNU197024-MONOMER

unificationXref24306
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-133

catalysis24303
type: catalysis
CONTROLLED: biochemicalReaction24295
CONTROLLER: phys-ent-participant24123
NAME: BETA-AMYLASE
XREF: unificationXref24304

phys-ent-participant24123
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24121
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24121
type: protein
NAME: BETA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24122

unificationXref24122
type: unificationXref
DB: CapCyc
ID: SGNU197225-MONOMER

unificationXref24304
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-156

catalysis24301
type: catalysis
CONTROLLED: biochemicalReaction24295
CONTROLLER: phys-ent-participant24118
NAME: BETA-AMYLASE
XREF: unificationXref24302

phys-ent-participant24118
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24116
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24116
type: protein
NAME: BETA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24117

unificationXref24117
type: unificationXref
DB: CapCyc
ID: SGNU197633-MONOMER

unificationXref24302
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-203

catalysis24299
type: catalysis
CONTROLLED: biochemicalReaction24295
CONTROLLER: phys-ent-participant24113
NAME: BETA-AMYLASE
XREF: unificationXref24300

phys-ent-participant24113
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24111
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24111
type: protein
NAME: BETA-AMYLASE
ORGANISM: bioSource20982
XREF: unificationXref24112

unificationXref24112
type: unificationXref
DB: CapCyc
ID: SGNU197874-MONOMER

unificationXref24300
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-235

catalysis24297
type: catalysis
CONTROLLED: biochemicalReaction24295
CONTROLLER: phys-ent-participant24108
NAME: beta-amylase
XREF: unificationXref24298

phys-ent-participant24108
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24106
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24106
type: protein
NAME: beta-amylase
ORGANISM: bioSource20982
XREF: unificationXref24107

unificationXref24107
type: unificationXref
DB: CapCyc
ID: SGNU202808-MONOMER

unificationXref24298
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-583

catalysis24290
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24294
NAME: BETA-FRUCTOFURANOSIDASE
XREF: unificationXref24291

biochemicalReaction24262
type: biochemicalReaction
EC-NUMBER: 3.2.1.26
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24264
NAME: beta-fructofuranosidase
RIGHT: phys-ent-participant21902
RIGHT: phys-ent-participant22163
SYNONYMS: β-fructosidase
SYNONYMS: Saccharase
SYNONYMS: Invertase
XREF: unificationXref24263

phys-ent-participant24264
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20904
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule20904
type: smallMolecule
MOLECULAR-WEIGHT: 422.279
NAME: sucrose-6-phosphate
STRUCTURE: chemicalStructure20908
SYNONYMS: sucrose-6F-P
XREF: unificationXref20907
XREF: unificationXref20906
XREF: unificationXref20905

chemicalStructure20908
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="SUCROSE-6P-atom1" elementType="O" x2="11.2799" y2="-5.4586"/> <atom id="SUCROSE-6P-atom2" elementType="O" x2="0.8836" y2="-6.0466"/> <atom id="SUCROSE-6P-atom3" elementType="O" x2="5.2218" y2="-4.7897"/> <atom id="SUCROSE-6P-atom4" elementType="O" x2="0.4202" y2="-1.0204"/> <atom id="SUCROSE-6P-atom5" elementType="O" x2="0.0" y2="-3.7887"/> <atom id="SUCROSE-6P-atom6" elementType="O" x2="3.0276" y2="0.0"/> <atom id="SUCROSE-6P-atom7" elementType="O" x2="9.6621" y2="-1.2515"/> <atom id="SUCROSE-6P-atom8" elementType="O" x2="6.8116" y2="-0.1783"/> <atom id="SUCROSE-6P-atom9" elementType="O" x2="9.5319" y2="-7.6459"/> <atom id="SUCROSE-6P-atom10" elementType="O" x2="11.5609" y2="-7.3433"/> <atom id="SUCROSE-6P-atom11" elementType="C" x2="2.1873" y2="-5.5365"/> <atom id="SUCROSE-6P-atom12" elementType="C" x2="5.1396" y2="-3.392"/> <atom id="SUCROSE-6P-atom13" elementType="C" x2="9.5223" y2="-4.2941"/> <atom id="SUCROSE-6P-atom14" elementType="O" x2="9.3122" y2="-5.6782"/> <atom id="SUCROSE-6P-atom15" elementType="O" x2="3.7012" y2="-3.6423"/> <atom id="SUCROSE-6P-atom16" elementType="O" x2="7.0787" y2="-3.7913"/> <atom id="SUCROSE-6P-atom17" elementType="O" x2="5.215" y2="-1.748"/> <atom id="SUCROSE-6P-atom18" elementType="C" x2="1.5138" y2="-1.8944"/> <atom id="SUCROSE-6P-atom19" elementType="C" x2="1.3037" y2="-3.2785"/> <atom id="SUCROSE-6P-atom20" elementType="C" x2="2.8176" y2="-1.3842"/> <atom id="SUCROSE-6P-atom21" elementType="C" x2="8.4929" y2="-2.0215"/> <atom id="SUCROSE-6P-atom22" elementType="C" x2="2.3974" y2="-4.1525"/> <atom id="SUCROSE-6P-atom23" elementType="C" x2="8.4286" y2="-3.4201"/> <atom id="SUCROSE-6P-atom24" elementType="C" x2="7.1826" y2="-1.5284"/> <atom id="SUCROSE-6P-atom25" elementType="C" x2="3.9112" y2="-2.2583"/> <atom id="SUCROSE-6P-atom26" elementType="C" x2="6.3086" y2="-2.6219"/> <atom id="SUCROSE-6P-atom27" elementType="P" x2="10.4059" y2="-6.5522"/> <bond id="SUCROSE-6P-bond1" atomRefs="SUCROSE-6P-atom24 SUCROSE-6P-atom2…

unificationXref20907
type: unificationXref
DB: CapCyc
ID: SUCROSE-6P

unificationXref20906
type: unificationXref
DB: LIGAND
ID: C02591

unificationXref20905
type: unificationXref
DB: PubChem
ID: 439762

unificationXref24263
type: unificationXref
DB: CapCyc
ID: 3.2.1.26-RXN

phys-ent-participant24294
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24292
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24292
type: protein
NAME: BETA-FRUCTOFURANOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24293

unificationXref24293
type: unificationXref
DB: CapCyc
ID: SGNU198695-MONOMER

unificationXref24291
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-321

catalysis24285
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24289
NAME: BETA-FRUCTOFURANOSIDASE
XREF: unificationXref24286

phys-ent-participant24289
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24287
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24287
type: protein
NAME: BETA-FRUCTOFURANOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24288

unificationXref24288
type: unificationXref
DB: CapCyc
ID: SGNU200410-MONOMER

unificationXref24286
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-422

catalysis24280
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24284
NAME: BETA-FRUCTOSIDASE
XREF: unificationXref24281

phys-ent-participant24284
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24282
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24282
type: protein
NAME: BETA-FRUCTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24283

unificationXref24283
type: unificationXref
DB: CapCyc
ID: SGNU202550-MONOMER

unificationXref24281
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-572

catalysis24275
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24279
NAME: BETA-FRUCTOSIDASE
XREF: unificationXref24276

phys-ent-participant24279
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24277
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24277
type: protein
NAME: BETA-FRUCTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24278

unificationXref24278
type: unificationXref
DB: CapCyc
ID: SGNU202856-MONOMER

unificationXref24276
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-586

catalysis24270
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24274
NAME: BETA-FRUCTOFURANOSIDASE
XREF: unificationXref24271

phys-ent-participant24274
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24272
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24272
type: protein
NAME: BETA-FRUCTOFURANOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24273

unificationXref24273
type: unificationXref
DB: CapCyc
ID: SGNU203370-MONOMER

unificationXref24271
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-615

catalysis24265
type: catalysis
CONTROLLED: biochemicalReaction24262
CONTROLLER: phys-ent-participant24269
NAME: BETA-FRUCTOSIDASE
XREF: unificationXref24266

phys-ent-participant24269
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24267
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24267
type: protein
NAME: BETA-FRUCTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24268

unificationXref24268
type: unificationXref
DB: CapCyc
ID: SGNU203672-MONOMER

unificationXref24266
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-633

catalysis24260
type: catalysis
CONTROLLED: biochemicalReaction24252
CONTROLLER: phys-ent-participant24153
NAME: ALPHA-AMYLASE
XREF: unificationXref24261

biochemicalReaction24252
type: biochemicalReaction
EC-NUMBER: 3.2.1.1
LEFT: phys-ent-participant24179
NAME: alpha-amylase
RIGHT: phys-ent-participant21772
SYNONYMS: Glycogenase
SYNONYMS: 1,4-α-D-glucan glucanohydrolase
XREF: unificationXref24253

unificationXref24253
type: unificationXref
DB: CapCyc
ID: ALPHA-AMYL-RXN

unificationXref24261
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-246

catalysis24258
type: catalysis
CONTROLLED: biochemicalReaction24252
CONTROLLER: phys-ent-participant24148
NAME: ALPHA-AMYLASE
XREF: unificationXref24259

unificationXref24259
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-395

catalysis24256
type: catalysis
CONTROLLED: biochemicalReaction24252
CONTROLLER: phys-ent-participant24143
NAME: ALPHA-AMYLASE
XREF: unificationXref24257

unificationXref24257
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-518

catalysis24254
type: catalysis
CONTROLLED: biochemicalReaction24252
CONTROLLER: phys-ent-participant24138
NAME: ALPHA-AMYLASE
XREF: unificationXref24255

unificationXref24255
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-728

catalysis24247
type: catalysis
CONTROLLED: biochemicalReaction24229
CONTROLLER: phys-ent-participant24251
NAME: ALPHA-GALACTOSIDASE
XREF: unificationXref24248

biochemicalReaction24229
type: biochemicalReaction
EC-NUMBER: 3.2.1.22
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24236
NAME: alpha-galactosidase
RIGHT: phys-ent-participant22156
RIGHT: phys-ent-participant22266
SYNONYMS: Melibiase
XREF: unificationXref24230

phys-ent-participant24236
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24231
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24231
type: smallMolecule
MOLECULAR-WEIGHT: 342.299
NAME: melibiose
STRUCTURE: chemicalStructure24235
SYNONYMS: 6-O-(α-D-galactopyranosyl)-D-glucopyranose
SYNONYMS: D-Gal-α1->6D-glucose
SYNONYMS: D-melibiose
SYNONYMS: melibiose
SYNONYMS: 6-O-α-D-Galactopyranosyl-D-glucose
SYNONYMS: 6-(α-D-galactosido)-D-glucose
XREF: unificationXref24234
XREF: unificationXref24233
XREF: unificationXref24232

chemicalStructure24235
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MELIBIOSE-atom1" elementType="O" x2="0.0" y2="-5.5529"/> <atom id="MELIBIOSE-atom2" elementType="O" x2="10.9376" y2="-4.9453"/> <atom id="MELIBIOSE-atom3" elementType="O" x2="10.9376" y2="-2.1453"/> <atom id="MELIBIOSE-atom4" elementType="O" x2="8.5127" y2="-0.7453"/> <atom id="MELIBIOSE-atom5" elementType="O" x2="2.5307" y2="0.0"/> <atom id="MELIBIOSE-atom6" elementType="O" x2="0.0797" y2="-1.3537"/> <atom id="MELIBIOSE-atom7" elementType="O" x2="6.0878" y2="-2.1453"/> <atom id="MELIBIOSE-atom8" elementType="O" x2="4.9285" y2="-1.4458"/> <atom id="MELIBIOSE-atom9" elementType="C" x2="0.0265" y2="-4.1532"/> <atom id="MELIBIOSE-atom10" elementType="C" x2="6.0878" y2="-4.9453"/> <atom id="MELIBIOSE-atom11" elementType="O" x2="4.8754" y2="-4.2453"/> <atom id="MELIBIOSE-atom12" elementType="O" x2="8.5127" y2="-4.9453"/> <atom id="MELIBIOSE-atom13" elementType="O" x2="2.4509" y2="-4.1992"/> <atom id="MELIBIOSE-atom14" elementType="C" x2="9.7252" y2="-4.2453"/> <atom id="MELIBIOSE-atom15" elementType="C" x2="9.7252" y2="-2.8453"/> <atom id="MELIBIOSE-atom16" elementType="C" x2="8.5127" y2="-2.1453"/> <atom id="MELIBIOSE-atom17" elementType="C" x2="2.5041" y2="-1.3997"/> <atom id="MELIBIOSE-atom18" elementType="C" x2="1.2786" y2="-2.0766"/> <atom id="MELIBIOSE-atom19" elementType="C" x2="7.3002" y2="-2.8453"/> <atom id="MELIBIOSE-atom20" elementType="C" x2="3.703" y2="-2.1226"/> <atom id="MELIBIOSE-atom21" elementType="C" x2="1.252" y2="-3.4763"/> <atom id="MELIBIOSE-atom22" elementType="C" x2="7.3002" y2="-4.2453"/> <atom id="MELIBIOSE-atom23" elementType="C" x2="3.6764" y2="-3.5224"/> <bond id="MELIBIOSE-bond1" atomRefs="MELIBIOSE-atom20 MELIBIOSE-atom23" order="1"/> <bond id="MELIBIOSE-bond2" atomRefs="MELIBIOSE-atom19 MELIBIOSE-atom22" order="1"/> <bond id="MELIBIOSE-bond3" atomRefs="MELIBIOSE-atom18 MELIBIOSE-atom21" order="1"/> <bond id="MELIBIOSE-bond4" atomRefs="MELIBIOSE-atom17 MELIBIOSE-atom20" order="1"/> <bond id="MELIBIOSE-bond5" atomRefs="MELIBIOSE-…

unificationXref24234
type: unificationXref
DB: CapCyc
ID: MELIBIOSE

unificationXref24233
type: unificationXref
DB: LIGAND
ID: C05402

unificationXref24232
type: unificationXref
DB: CAS
ID: 585-99-9

phys-ent-participant22156
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22151
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22151
type: smallMolecule
MOLECULAR-WEIGHT: 180.157
NAME: beta-D-glucose
STRUCTURE: chemicalStructure22155
SYNONYMS: glucose
SYNONYMS: dextrose
SYNONYMS: glc
SYNONYMS: glc-ring
SYNONYMS: D-glucose-ring
SYNONYMS: D-glucose
SYNONYMS: glucoside
SYNONYMS: β-D-glucopyranose
SYNONYMS: β-glucose
SYNONYMS: 6-(hydroxymethyl)tetrahydropyran-2,3,4,5-tetraol
XREF: unificationXref22154
XREF: unificationXref22153
XREF: unificationXref22152

chemicalStructure22155
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GLC-atom1" elementType="O" x2="0.0" y2="-4.2"/> <atom id="GLC-atom2" elementType="O" x2="6.2497" y2="-4.2"/> <atom id="GLC-atom3" elementType="O" x2="6.2497" y2="-1.4"/> <atom id="GLC-atom4" elementType="O" x2="3.8249" y2="0.0"/> <atom id="GLC-atom5" elementType="O" x2="1.4" y2="-1.4"/> <atom id="GLC-atom6" elementType="C" x2="1.4" y2="-4.2"/> <atom id="GLC-atom7" elementType="O" x2="3.8249" y2="-4.2"/> <atom id="GLC-atom8" elementType="C" x2="5.0373" y2="-3.5"/> <atom id="GLC-atom9" elementType="C" x2="5.0373" y2="-2.1"/> <atom id="GLC-atom10" elementType="C" x2="3.8249" y2="-1.4"/> <atom id="GLC-atom11" elementType="C" x2="2.6124" y2="-2.1"/> <atom id="GLC-atom12" elementType="C" x2="2.6124" y2="-3.5"/> <bond id="GLC-bond1" atomRefs="GLC-atom11 GLC-atom12" order="1"/> <bond id="GLC-bond2" atomRefs="GLC-atom10 GLC-atom11" order="1"/> <bond id="GLC-bond3" atomRefs="GLC-atom9 GLC-atom10" order="1"/> <bond id="GLC-bond4" atomRefs="GLC-atom8 GLC-atom9" order="1"/> <bond id="GLC-bond5" atomRefs="GLC-atom7 GLC-atom12" order="1"/> <bond id="GLC-bond6" atomRefs="GLC-atom7 GLC-atom8" order="1"/> <bond id="GLC-bond7" atomRefs="GLC-atom12 GLC-atom6" order="1"/> <bond id="GLC-bond8" atomRefs="GLC-atom11 GLC-atom5" order="1"/> <bond id="GLC-bond9" atomRefs="GLC-atom10 GLC-atom4" order="1"/> <bond id="GLC-bond10" atomRefs="GLC-atom9 GLC-atom3" order="1"/> <bond id="GLC-bond11" atomRefs="GLC-atom8 GLC-atom2" order="1"/> <bond id="GLC-bond12" atomRefs="GLC-atom1 GLC-atom6" order="1"/> <formula concise="C 6 H 12 O 6" formalCharge="0"/> 180.157 C(O)C1(C(O)C(O)C(O)C(O1)O)

unificationXref22154
type: unificationXref
DB: CapCyc
ID: GLC

unificationXref22153
type: unificationXref
DB: CAS
ID: 50-99-7

unificationXref22152
type: unificationXref
DB: LIGAND
ID: C00031

phys-ent-participant22266
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22259
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22259
type: smallMolecule
MOLECULAR-WEIGHT: 180.157
NAME: beta-D-galactose
STRUCTURE: chemicalStructure22265
SYNONYMS: galactose
SYNONYMS: galactopyranoside
SYNONYMS: galactopyranose
SYNONYMS: D-galactose
SYNONYMS: cerebrose
SYNONYMS: 6-(hydroxymethyl)tetrahydropyran-2,3,4,5-tetraol
XREF: unificationXref22264
XREF: unificationXref22263
XREF: unificationXref22262
XREF: unificationXref22261
XREF: unificationXref22260

chemicalStructure22265
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="GALACTOSE-atom1" elementType="O" x2="0.0" y2="-5.6"/> <atom id="GALACTOSE-atom2" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="GALACTOSE-atom3" elementType="O" x2="4.8497" y2="-1.4"/> <atom id="GALACTOSE-atom4" elementType="O" x2="2.4249" y2="0.0"/> <atom id="GALACTOSE-atom5" elementType="O" x2="0.0" y2="-1.4"/> <atom id="GALACTOSE-atom6" elementType="C" x2="0.0" y2="-4.2"/> <atom id="GALACTOSE-atom7" elementType="O" x2="2.4249" y2="-4.2"/> <atom id="GALACTOSE-atom8" elementType="C" x2="3.6373" y2="-3.5"/> <atom id="GALACTOSE-atom9" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="GALACTOSE-atom10" elementType="C" x2="2.4249" y2="-1.4"/> <atom id="GALACTOSE-atom11" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="GALACTOSE-atom12" elementType="C" x2="1.2124" y2="-3.5"/> <bond id="GALACTOSE-bond1" atomRefs="GALACTOSE-atom11 GALACTOSE-atom12" order="1"/> <bond id="GALACTOSE-bond2" atomRefs="GALACTOSE-atom10 GALACTOSE-atom11" order="1"/> <bond id="GALACTOSE-bond3" atomRefs="GALACTOSE-atom9 GALACTOSE-atom10" order="1"/> <bond id="GALACTOSE-bond4" atomRefs="GALACTOSE-atom8 GALACTOSE-atom9" order="1"/> <bond id="GALACTOSE-bond5" atomRefs="GALACTOSE-atom7 GALACTOSE-atom12" order="1"/> <bond id="GALACTOSE-bond6" atomRefs="GALACTOSE-atom7 GALACTOSE-atom8" order="1"/> <bond id="GALACTOSE-bond7" atomRefs="GALACTOSE-atom12 GALACTOSE-atom6" order="1"/> <bond id="GALACTOSE-bond8" atomRefs="GALACTOSE-atom11 GALACTOSE-atom5" order="1"/> <bond id="GALACTOSE-bond9" atomRefs="GALACTOSE-atom10 GALACTOSE-atom4" order="1"/> <bond id="GALACTOSE-bond10" atomRefs="GALACTOSE-atom9 GALACTOSE-atom3" order="1"/> <bond id="GALACTOSE-bond11" atomRefs="GALACTOSE-atom8 GALACTOSE-atom2" order="1"/> <bond id="GALACTOSE-bond12" atomRefs="GALACTOSE-atom1 GALACTOSE-atom6" order="1"/> <formula concise="C 6 H 12 O 6" formalCharge="0"/> 180.157 C(O)C1(C(O)C(O)C(O)C(O1)O)

unificationXref22264
type: unificationXref
DB: CapCyc
ID: GALACTOSE

unificationXref22263
type: unificationXref
DB: CAS
ID: 59-23-4

unificationXref22262
type: unificationXref
DB: LIGAND
ID: C00124

unificationXref22261
type: unificationXref
DB: LIGAND
ID: C01582

unificationXref22260
type: unificationXref
DB: CAS
ID: 33419-42-0

unificationXref24230
type: unificationXref
DB: CapCyc
ID: ALPHAGALACTOSID-RXN

phys-ent-participant24251
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24249
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24249
type: protein
NAME: ALPHA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24250

unificationXref24250
type: unificationXref
DB: CapCyc
ID: SGNU198468-MONOMER

unificationXref24248
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-301

catalysis24242
type: catalysis
CONTROLLED: biochemicalReaction24229
CONTROLLER: phys-ent-participant24246
NAME: ALPHA-GALACTOSIDASE
XREF: unificationXref24243

phys-ent-participant24246
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24244
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24244
type: protein
NAME: ALPHA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24245

unificationXref24245
type: unificationXref
DB: CapCyc
ID: SGNU203211-MONOMER

unificationXref24243
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-602

catalysis24237
type: catalysis
CONTROLLED: biochemicalReaction24229
CONTROLLER: phys-ent-participant24241
NAME: ALPHA-GALACTOSIDASE
XREF: unificationXref24238

phys-ent-participant24241
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24239
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24239
type: protein
NAME: ALPHA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24240

unificationXref24240
type: unificationXref
DB: CapCyc
ID: SGNU203289-MONOMER

unificationXref24238
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-609

catalysis24227
type: catalysis
CONTROLLED: biochemicalReaction24215
CONTROLLER: phys-ent-participant24214
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24228

biochemicalReaction24215
type: biochemicalReaction
EC-NUMBER: 3.2.1.23
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24222
NAME: beta-galactosidase
RIGHT: phys-ent-participant22266
RIGHT: phys-ent-participant22156
SYNONYMS: Lactase
XREF: unificationXref24216

phys-ent-participant24222
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24217
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24217
type: smallMolecule
MOLECULAR-WEIGHT: 342.299
NAME: lactose
STRUCTURE: chemicalStructure24221
SYNONYMS: α-lactose
XREF: unificationXref24220
XREF: unificationXref24219
XREF: unificationXref24218

chemicalStructure24221
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LACTOSE-atom1" elementType="C" x2="-4.7457" y2="-0.5688"/> <atom id="LACTOSE-atom2" elementType="C" x2="-4.7457" y2="0.2563"/> <atom id="LACTOSE-atom3" elementType="C" x2="-4.0313" y2="0.6688"/> <atom id="LACTOSE-atom4" elementType="C" x2="-3.3168" y2="0.2563"/> <atom id="LACTOSE-atom5" elementType="C" x2="-3.3168" y2="-0.5688"/> <atom id="LACTOSE-atom6" elementType="C" x2="-5.4602" y2="-0.9813"/> <atom id="LACTOSE-atom7" elementType="C" x2="-1.9157" y2="-2.2345"/> <atom id="LACTOSE-atom8" elementType="C" x2="-1.8973" y2="-1.4097"/> <atom id="LACTOSE-atom9" elementType="C" x2="-1.1737" y2="-1.0133"/> <atom id="LACTOSE-atom10" elementType="C" x2="-0.4687" y2="-1.4417"/> <atom id="LACTOSE-atom11" elementType="C" x2="-0.4872" y2="-2.2665"/> <atom id="LACTOSE-atom12" elementType="O" x2="-6.1747" y2="-0.5687"/> <atom id="LACTOSE-atom13" elementType="O" x2="-5.4602" y2="0.6688"/> <atom id="LACTOSE-atom14" elementType="O" x2="-4.0313" y2="1.4938"/> <atom id="LACTOSE-atom15" elementType="O" x2="-4.0313" y2="-0.9813"/> <atom id="LACTOSE-atom16" elementType="O" x2="-2.6023" y2="0.6688"/> <atom id="LACTOSE-atom17" elementType="O" x2="-2.6023" y2="-0.9813"/> <atom id="LACTOSE-atom18" elementType="O" x2="-1.2107" y2="-2.6629"/> <atom id="LACTOSE-atom19" elementType="O" x2="-1.1552" y2="-0.1885"/> <atom id="LACTOSE-atom20" elementType="O" x2="0.2549" y2="-1.0453"/> <atom id="LACTOSE-atom21" elementType="O" x2="0.2179" y2="-2.6949"/> <atom id="LACTOSE-atom22" elementType="C" x2="-2.6393" y2="-2.6309"/> <atom id="LACTOSE-atom23" elementType="O" x2="-2.564" y2="-3.5181"/> <bond id="LACTOSE-bond1" atomRefs="LACTOSE-atom22 LACTOSE-atom23" order="1"/> <bond id="LACTOSE-bond2" atomRefs="LACTOSE-atom8 LACTOSE-atom17" order="1"/> <bond id="LACTOSE-bond3" atomRefs="LACTOSE-atom9 LACTOSE-atom19" order="1"/> <bond id="LACTOSE-bond4" atomRefs="LACTOSE-atom10 LACTOSE-atom20" order="1"/> <bond id="LACTOSE-bond5" atomRefs="LACTOSE-atom11 LACTOSE-atom21" order="1"/> <bond id="LACTOSE-bo…

unificationXref24220
type: unificationXref
DB: CapCyc
ID: LACTOSE

unificationXref24219
type: unificationXref
DB: CAS
ID: 63-42-3

unificationXref24218
type: unificationXref
DB: LIGAND
ID: C00243

unificationXref24216
type: unificationXref
DB: CapCyc
ID: BETAGALACTOSID-RXN

phys-ent-participant24214
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24212
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24212
type: protein
NAME: BETA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24213

unificationXref24213
type: unificationXref
DB: CapCyc
ID: SGNU197671-MONOMER

unificationXref24228
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-210

catalysis24225
type: catalysis
CONTROLLED: biochemicalReaction24215
CONTROLLER: phys-ent-participant24209
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24226

phys-ent-participant24209
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24207
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24207
type: protein
NAME: BETA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24208

unificationXref24208
type: unificationXref
DB: CapCyc
ID: SGNU199419-MONOMER

unificationXref24226
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-345

catalysis24223
type: catalysis
CONTROLLED: biochemicalReaction24215
CONTROLLER: phys-ent-participant24204
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24224

phys-ent-participant24204
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24202
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24202
type: protein
NAME: BETA-GALACTOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24203

unificationXref24203
type: unificationXref
DB: CapCyc
ID: SGNU201109-MONOMER

unificationXref24224
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-470

catalysis24210
type: catalysis
CONTROLLED: biochemicalReaction24190
CONTROLLER: phys-ent-participant24214
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24211

biochemicalReaction24190
type: biochemicalReaction
EC-NUMBER: 3.2.1.23
LEFT: phys-ent-participant24195
LEFT: phys-ent-participant20951
NAME: beta-galactosidase
RIGHT: phys-ent-participant24199
RIGHT: phys-ent-participant22156
SYNONYMS: Lactase
XREF: unificationXref24191

phys-ent-participant24195
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24192
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24192
type: smallMolecule
MOLECULAR-WEIGHT: 340.283
NAME: 3'-ketolactose
STRUCTURE: chemicalStructure24194
SYNONYMS: 3'-dehydro-β-D-galactosyl-β-D-glucopyranoside
XREF: unificationXref24193

chemicalStructure24194
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-KETOLACTOSE-atom1" elementType="O" x2="3.4818" y2="0.0"/> <atom id="3-KETOLACTOSE-atom2" elementType="O" x2="0.0" y2="-3.3041"/> <atom id="3-KETOLACTOSE-atom3" elementType="O" x2="4.8513" y2="-6.103"/> <atom id="3-KETOLACTOSE-atom4" elementType="O" x2="10.7698" y2="-7.0063"/> <atom id="3-KETOLACTOSE-atom5" elementType="O" x2="1.0723" y2="-1.4069"/> <atom id="3-KETOLACTOSE-atom6" elementType="O" x2="5.9184" y2="-1.4071"/> <atom id="3-KETOLACTOSE-atom7" elementType="O" x2="10.7698" y2="-4.2059"/> <atom id="3-KETOLACTOSE-atom8" elementType="O" x2="8.3352" y2="-2.8095"/> <atom id="3-KETOLACTOSE-atom9" elementType="C" x2="1.0723" y2="-4.2072"/> <atom id="3-KETOLACTOSE-atom10" elementType="C" x2="5.9237" y2="-7.0061"/> <atom id="3-KETOLACTOSE-atom11" elementType="O" x2="8.335" y2="-7.0063"/> <atom id="3-KETOLACTOSE-atom12" elementType="O" x2="3.4836" y2="-4.2074"/> <atom id="3-KETOLACTOSE-atom13" elementType="O" x2="5.9184" y2="-4.2074"/> <atom id="3-KETOLACTOSE-atom14" elementType="C" x2="3.4836" y2="-1.4069"/> <atom id="3-KETOLACTOSE-atom15" elementType="C" x2="9.5562" y2="-6.3082"/> <atom id="3-KETOLACTOSE-atom16" elementType="C" x2="2.2702" y2="-2.1051"/> <atom id="3-KETOLACTOSE-atom17" elementType="C" x2="4.7049" y2="-2.1053"/> <atom id="3-KETOLACTOSE-atom18" elementType="C" x2="2.2702" y2="-3.5092"/> <atom id="3-KETOLACTOSE-atom19" elementType="C" x2="7.1216" y2="-6.308"/> <atom id="3-KETOLACTOSE-atom20" elementType="C" x2="9.5562" y2="-4.9041"/> <atom id="3-KETOLACTOSE-atom21" elementType="C" x2="8.335" y2="-4.2057"/> <atom id="3-KETOLACTOSE-atom22" elementType="C" x2="4.7049" y2="-3.5094"/> <atom id="3-KETOLACTOSE-atom23" elementType="C" x2="7.1216" y2="-4.904"/> <bond id="3-KETOLACTOSE-bond1" atomRefs="3-KETOLACTOSE-atom21 3-KETOLACTOSE-atom23" order="1"/> <bond id="3-KETOLACTOSE-bond2" atomRefs="3-KETOLACTOSE-atom20 3-KETOLACTOSE-atom21" order="1"/> <bond id="3-KETOLACTOSE-bond3" atomRefs="3-KETOLACTOSE-atom19 3-KETOLACTOSE-atom23" order="1"/> <bond …

unificationXref24193
type: unificationXref
DB: CapCyc
ID: 3-KETOLACTOSE

phys-ent-participant24199
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24196
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24196
type: smallMolecule
MOLECULAR-WEIGHT: 178.141
NAME: 3-keto-beta-D-galactose
STRUCTURE: chemicalStructure24198
SYNONYMS: 3-dehydro-β-D-galactose
XREF: unificationXref24197

chemicalStructure24198
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-1242-atom1" elementType="O" x2="2.8381" y2="-0.0986"/> <atom id="CPD-1242-atom2" elementType="O" x2="2.8381" y2="1.4022"/> <atom id="CPD-1242-atom3" elementType="O" x2="1.5333" y2="2.1506"/> <atom id="CPD-1242-atom4" elementType="O" x2="0.2409" y2="1.4023"/> <atom id="CPD-1242-atom5" elementType="O" x2="1.5332" y2="-0.0986"/> <atom id="CPD-1242-atom6" elementType="O" x2="-0.3337" y2="0.3855"/> <atom id="CPD-1242-atom7" elementType="C" x2="2.1878" y2="0.2755"/> <atom id="CPD-1242-atom8" elementType="C" x2="2.1878" y2="1.0239"/> <atom id="CPD-1242-atom9" elementType="C" x2="1.5332" y2="1.4023"/> <atom id="CPD-1242-atom10" elementType="C" x2="0.883" y2="1.024"/> <atom id="CPD-1242-atom11" elementType="C" x2="0.883" y2="0.2756"/> <atom id="CPD-1242-atom12" elementType="C" x2="0.2409" y2="-0.0985"/> <bond id="CPD-1242-bond1" atomRefs="CPD-1242-atom10 CPD-1242-atom4" order="1"/> <bond id="CPD-1242-bond2" atomRefs="CPD-1242-atom9 CPD-1242-atom3" order="2"/> <bond id="CPD-1242-bond3" atomRefs="CPD-1242-atom8 CPD-1242-atom2" order="1"/> <bond id="CPD-1242-bond4" atomRefs="CPD-1242-atom7 CPD-1242-atom1" order="1"/> <bond id="CPD-1242-bond5" atomRefs="CPD-1242-atom11 CPD-1242-atom12" order="1"/> <bond id="CPD-1242-bond6" atomRefs="CPD-1242-atom10 CPD-1242-atom11" order="1"/> <bond id="CPD-1242-bond7" atomRefs="CPD-1242-atom9 CPD-1242-atom10" order="1"/> <bond id="CPD-1242-bond8" atomRefs="CPD-1242-atom8 CPD-1242-atom9" order="1"/> <bond id="CPD-1242-bond9" atomRefs="CPD-1242-atom7 CPD-1242-atom8" order="1"/> <bond id="CPD-1242-bond10" atomRefs="CPD-1242-atom5 CPD-1242-atom7" order="1"/> <bond id="CPD-1242-bond11" atomRefs="CPD-1242-atom11 CPD-1242-atom5" order="1"/> <bond id="CPD-1242-bond12" atomRefs="CPD-1242-atom6 CPD-1242-atom12" order="1"/> <formula concise="C 6 H 10 O 6" formalCharge="0"/> 178.141 C1(C(O)C(=O)C(O)C(O1)CO)(O)

unificationXref24197
type: unificationXref
DB: CapCyc
ID: CPD-1242

unificationXref24191
type: unificationXref
DB: CapCyc
ID: KETOLACTOSE-RXN

unificationXref24211
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-209

catalysis24205
type: catalysis
CONTROLLED: biochemicalReaction24190
CONTROLLER: phys-ent-participant24209
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24206

unificationXref24206
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-344

catalysis24200
type: catalysis
CONTROLLED: biochemicalReaction24190
CONTROLLER: phys-ent-participant24204
NAME: BETA-GALACTOSIDASE
XREF: unificationXref24201

unificationXref24201
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-469

catalysis24185
type: catalysis
CONTROLLED: biochemicalReaction24175
CONTROLLER: phys-ent-participant24189
NAME: ALPHA-GLUCOSIDASE
XREF: unificationXref24186

biochemicalReaction24175
type: biochemicalReaction
EC-NUMBER: 3.2.1.20
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24179
NAME: alpha-glucosidase
RIGHT: phys-ent-participant22156
RIGHT: phys-ent-participant24179
SYNONYMS: Acid maltase
SYNONYMS: Lysosomal α-glucosidase
SYNONYMS: Maltase-glucoamylase
SYNONYMS: Glucosidosucrase
SYNONYMS: Glucoinvertase
SYNONYMS: Maltase
XREF: unificationXref24176

unificationXref24176
type: unificationXref
DB: CapCyc
ID: MALTODEXGLUCOSID-RXN

phys-ent-participant24189
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24187
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24187
type: protein
NAME: ALPHA-GLUCOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24188

unificationXref24188
type: unificationXref
DB: CapCyc
ID: SGNU199443-MONOMER

unificationXref24186
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-350

catalysis24180
type: catalysis
CONTROLLED: biochemicalReaction24175
CONTROLLER: phys-ent-participant24184
NAME: ALPHA-GLUCOSIDASE
XREF: unificationXref24181

phys-ent-participant24184
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24182
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24182
type: protein
NAME: ALPHA-GLUCOSIDASE
ORGANISM: bioSource20982
XREF: unificationXref24183

unificationXref24183
type: unificationXref
DB: CapCyc
ID: SGNU204216-MONOMER

unificationXref24181
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-671

catalysis24170
type: catalysis
CONTROLLED: biochemicalReaction24159
CONTROLLER: phys-ent-participant24153
NAME: ALPHA-AMYLASE
XREF: unificationXref24171

biochemicalReaction24159
type: biochemicalReaction
EC-NUMBER: 3.2.1.1
LEFT: phys-ent-participant24163
NAME: alpha-amylase
RIGHT: phys-ent-participant24158
SYNONYMS: endoamylase
SYNONYMS: 1,4-a-D-glucan glucanohydrolase
SYNONYMS: glycogenase
XREF: unificationXref24160

phys-ent-participant24158
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24156
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24156
type: smallMolecule
NAME: a large-branched glucan
XREF: unificationXref24157

unificationXref24157
type: unificationXref
DB: CapCyc
ID: Large-branched-glucans

unificationXref24160
type: unificationXref
DB: CapCyc
ID: RXN-1823

unificationXref24171
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-247

catalysis24168
type: catalysis
CONTROLLED: biochemicalReaction24159
CONTROLLER: phys-ent-participant24148
NAME: ALPHA-AMYLASE
XREF: unificationXref24169

unificationXref24169
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-396

catalysis24166
type: catalysis
CONTROLLED: biochemicalReaction24159
CONTROLLER: phys-ent-participant24143
NAME: ALPHA-AMYLASE
XREF: unificationXref24167

unificationXref24167
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-519

catalysis24164
type: catalysis
CONTROLLED: biochemicalReaction24159
CONTROLLER: phys-ent-participant24138
NAME: ALPHA-AMYLASE
XREF: unificationXref24165

unificationXref24165
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-729

catalysis24149
type: catalysis
CONTROLLED: biochemicalReaction24129
CONTROLLER: phys-ent-participant24153
NAME: ALPHA-AMYLASE
XREF: unificationXref24150

biochemicalReaction24129
type: biochemicalReaction
EC-NUMBER: 3.2.1.1
LEFT: phys-ent-participant24103
NAME: alpha-amylase
RIGHT: phys-ent-participant24133
SYNONYMS: 1,4-a-D-glucan glucanohydrolase
SYNONYMS: endoamylase
XREF: unificationXref24130

phys-ent-participant24103
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24101
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24101
type: smallMolecule
NAME: a long-linear glucan
XREF: unificationXref24102

unificationXref24102
type: unificationXref
DB: CapCyc
ID: Long-linear-glucans

phys-ent-participant24133
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24131
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24131
type: smallMolecule
NAME: a short glucan
XREF: unificationXref24132

unificationXref24132
type: unificationXref
DB: CapCyc
ID: Short-glucans

unificationXref24130
type: unificationXref
DB: CapCyc
ID: RXN-1825

unificationXref24150
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-248

catalysis24144
type: catalysis
CONTROLLED: biochemicalReaction24129
CONTROLLER: phys-ent-participant24148
NAME: ALPHA-AMYLASE
XREF: unificationXref24145

unificationXref24145
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-397

catalysis24139
type: catalysis
CONTROLLED: biochemicalReaction24129
CONTROLLER: phys-ent-participant24143
NAME: ALPHA-AMYLASE
XREF: unificationXref24140

unificationXref24140
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-520

catalysis24134
type: catalysis
CONTROLLED: biochemicalReaction24129
CONTROLLER: phys-ent-participant24138
NAME: ALPHA-AMYLASE
XREF: unificationXref24135

unificationXref24135
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-730

catalysis24124
type: catalysis
CONTROLLED: biochemicalReaction24099
CONTROLLER: phys-ent-participant24128
NAME: BETA-AMYLASE
XREF: unificationXref24125

biochemicalReaction24099
type: biochemicalReaction
EC-NUMBER: 3.2.1.2
LEFT: phys-ent-participant24103
NAME: beta-amylase
RIGHT: phys-ent-participant24089
SYNONYMS: 1,4-a-D-glucan maltohydrolase
XREF: unificationXref24100

unificationXref24100
type: unificationXref
DB: CapCyc
ID: RXN-1827

unificationXref24125
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-134

catalysis24119
type: catalysis
CONTROLLED: biochemicalReaction24099
CONTROLLER: phys-ent-participant24123
NAME: BETA-AMYLASE
XREF: unificationXref24120

unificationXref24120
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-157

catalysis24114
type: catalysis
CONTROLLED: biochemicalReaction24099
CONTROLLER: phys-ent-participant24118
NAME: BETA-AMYLASE
XREF: unificationXref24115

unificationXref24115
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-204

catalysis24109
type: catalysis
CONTROLLED: biochemicalReaction24099
CONTROLLER: phys-ent-participant24113
NAME: BETA-AMYLASE
XREF: unificationXref24110

unificationXref24110
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-236

catalysis24104
type: catalysis
CONTROLLED: biochemicalReaction24099
CONTROLLER: phys-ent-participant24108
NAME: beta-amylase
XREF: unificationXref24105

unificationXref24105
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-584

catalysis24076
type: catalysis
CONTROLLED: biochemicalReaction24068
CONTROLLER: phys-ent-participant24080
NAME: ISOAMYLASE
XREF: unificationXref24077

biochemicalReaction24068
type: biochemicalReaction
EC-NUMBER: 3.2.1.68
LEFT: phys-ent-participant24075
NAME: RXN-4301
RIGHT: phys-ent-participant24075
RIGHT: phys-ent-participant21772
XREF: unificationXref24069

unificationXref24069
type: unificationXref
DB: CapCyc
ID: RXN-4301

unificationXref24077
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-581

catalysis24037
type: catalysis
CONTROLLED: biochemicalReaction24024
CONTROLLER: phys-ent-participant24041
NAME: ADENOSYLHOMOCYSTEINASE
XREF: unificationXref24038

biochemicalReaction24024
type: biochemicalReaction
EC-NUMBER: 3.3.1.1
LEFT: phys-ent-participant24031
LEFT: phys-ent-participant20951
NAME: Adenosylhomocysteinase
RIGHT: phys-ent-participant22424
RIGHT: phys-ent-participant23820
SYNONYMS: S-adenosyl-L-homocysteine hydrolase
XREF: unificationXref24025

phys-ent-participant23820
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23815
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23815
type: smallMolecule
MOLECULAR-WEIGHT: 267.244
NAME: adenosine
STRUCTURE: chemicalStructure23819
SYNONYMS: adenine-D-ribose
XREF: unificationXref23818
XREF: unificationXref23817
XREF: unificationXref23816

chemicalStructure23819
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ADENOSINE-atom1" elementType="C" x2="-2.6128" y2="0.6749"/> <atom id="ADENOSINE-atom2" elementType="C" x2="-1.7879" y2="0.6606"/> <atom id="ADENOSINE-atom3" elementType="C" x2="-1.5467" y2="-0.1282"/> <atom id="ADENOSINE-atom4" elementType="O" x2="-3.0345" y2="-1.4697"/> <atom id="ADENOSINE-atom5" elementType="O" x2="-3.0862" y2="1.3506"/> <atom id="ADENOSINE-atom6" elementType="O" x2="-1.2916" y2="1.3197"/> <atom id="ADENOSINE-atom7" elementType="C" x2="-0.2873" y2="-2.8235"/> <atom id="ADENOSINE-atom8" elementType="C" x2="-1.7125" y2="-2.9268"/> <atom id="ADENOSINE-atom9" elementType="C" x2="-1.0894" y2="-1.641"/> <atom id="ADENOSINE-atom10" elementType="C" x2="-0.3469" y2="-2.0006"/> <atom id="ADENOSINE-atom11" elementType="C" x2="-0.1648" y2="-0.6782"/> <atom id="ADENOSINE-atom12" elementType="N" x2="-0.9767" y2="-0.8237"/> <atom id="ADENOSINE-atom13" elementType="N" x2="0.2245" y2="-1.4056"/> <atom id="ADENOSINE-atom14" elementType="N" x2="-1.7721" y2="-2.104"/> <atom id="ADENOSINE-atom15" elementType="N" x2="-0.9701" y2="-3.2866"/> <atom id="ADENOSINE-atom16" elementType="N" x2="0.4552" y2="-3.1832"/> <atom id="ADENOSINE-atom17" elementType="O" x2="-2.2224" y2="-0.6015"/> <atom id="ADENOSINE-atom18" elementType="C" x2="-2.8813" y2="-0.1052"/> <atom id="ADENOSINE-atom19" elementType="C" x2="-3.3308" y2="-0.797"/> <bond id="ADENOSINE-bond1" atomRefs="ADENOSINE-atom17 ADENOSINE-atom18" order="1"/> <bond id="ADENOSINE-bond2" atomRefs="ADENOSINE-atom17 ADENOSINE-atom3" order="1"/> <bond id="ADENOSINE-bond3" atomRefs="ADENOSINE-atom18 ADENOSINE-atom1" order="1"/> <bond id="ADENOSINE-bond4" atomRefs="ADENOSINE-atom1 ADENOSINE-atom2" order="1"/> <bond id="ADENOSINE-bond5" atomRefs="ADENOSINE-atom2 ADENOSINE-atom3" order="1"/> <bond id="ADENOSINE-bond6" atomRefs="ADENOSINE-atom1 ADENOSINE-atom5" order="1"/> <bond id="ADENOSINE-bond7" atomRefs="ADENOSINE-atom2 ADENOSINE-atom6" order="1"/> <bond id="ADENOSINE-bond8" atomRefs="ADENOSINE-atom3 ADENOSINE-atom12" o…

unificationXref23818
type: unificationXref
DB: CapCyc
ID: ADENOSINE

unificationXref23817
type: unificationXref
DB: CAS
ID: 58-61-7

unificationXref23816
type: unificationXref
DB: LIGAND
ID: C00212

unificationXref24025
type: unificationXref
DB: CapCyc
ID: ADENOSYLHOMOCYSTEINASE-RXN

phys-ent-participant24041
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24039
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24039
type: protein
NAME: ADENOSYLHOMOCYSTEINASE
ORGANISM: bioSource20982
XREF: unificationXref24040

unificationXref24040
type: unificationXref
DB: CapCyc
ID: SGNU196203-MONOMER

unificationXref24038
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-14

catalysis24032
type: catalysis
CONTROLLED: biochemicalReaction24024
CONTROLLER: phys-ent-participant24036
NAME: ADENOSYLHOMOCYSTEINASE
XREF: unificationXref24033

phys-ent-participant24036
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein24034
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein24034
type: protein
NAME: ADENOSYLHOMOCYSTEINASE
ORGANISM: bioSource20982
XREF: unificationXref24035

unificationXref24035
type: unificationXref
DB: CapCyc
ID: SGNU199039-MONOMER

unificationXref24033
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-732

catalysis24022
type: catalysis
CONTROLLED: biochemicalReaction24006
CONTROLLER: phys-ent-participant23959
NAME: AMIDASE
XREF: unificationXref24023

biochemicalReaction24006
type: biochemicalReaction
EC-NUMBER: 3.5.1.4
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant24011
NAME: Amidase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant24015
SYNONYMS: Acylase
SYNONYMS: Acylamidase
XREF: unificationXref24007

phys-ent-participant24011
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24008
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24008
type: smallMolecule
NAME: a monocarboxylic-acid-amide
STRUCTURE: chemicalStructure24010
XREF: unificationXref24009

chemicalStructure24010
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="Monocarboxylic-Acid-Amides" title="a monocarboxylic-acid-amide"> <atomArray> <atom id="Monocarboxylic-Acid-Amides-atom1" elementType="N" x2="2.4248" y2="0.0"/> <atom id="Monocarboxylic-Acid-Amides-atom2" elementType="O" x2="1.2124" y2="-2.1"/> <atom id="Monocarboxylic-Acid-Amides-atom3" elementType="R" x2="0.0" y2="0.0"/> <atom id="Monocarboxylic-Acid-Amides-atom4" elementType="C" x2="1.2124" y2="-0.7"/> </atomArray> <bondArray> <bond id="Monocarboxylic-Acid-Amides-bond1" atomRefs="Monocarboxylic-Acid-Amides-atom3 Monocarboxylic-Acid-Amides-atom4" order="1"/> <bond id="Monocarboxylic-Acid-Amides-bond2" atomRefs="Monocarboxylic-Acid-Amides-atom2 Monocarboxylic-Acid-Amides-atom4" order="2"/> <bond id="Monocarboxylic-Acid-Amides-bond3" atomRefs="Monocarboxylic-Acid-Amides-atom1 Monocarboxylic-Acid-Amides-atom4" order="1"/> </bondArray> <formula concise="C 1 H 2 N 1 O 1 R 1" formalCharge="0"/> </molecule> </cml>

unificationXref24009
type: unificationXref
DB: CapCyc
ID: Monocarboxylic-Acid-Amides

phys-ent-participant24015
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule24012
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule24012
type: smallMolecule
NAME: a monocarboxylate
STRUCTURE: chemicalStructure24014
XREF: unificationXref24013

chemicalStructure24014
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="Monocarboxylates" title="a monocarboxylate"> <atomArray> <atom id="Monocarboxylates-atom1" elementType="O" x2="2.4248" y2="-2.1"/> <atom id="Monocarboxylates-atom2" elementType="O" x2="1.2124" y2="0.0" formalCharge="-1"/> <atom id="Monocarboxylates-atom3" elementType="R" x2="0.0" y2="-2.1"/> <atom id="Monocarboxylates-atom4" elementType="C" x2="1.2124" y2="-1.4"/> </atomArray> <bondArray> <bond id="Monocarboxylates-bond1" atomRefs="Monocarboxylates-atom3 Monocarboxylates-atom4" order="1"/> <bond id="Monocarboxylates-bond2" atomRefs="Monocarboxylates-atom2 Monocarboxylates-atom4" order="1"/> <bond id="Monocarboxylates-bond3" atomRefs="Monocarboxylates-atom1 Monocarboxylates-atom4" order="2"/> </bondArray> <formula concise="C 1 O 2 R 1" formalCharge="0"/> </molecule> </cml>

unificationXref24013
type: unificationXref
DB: CapCyc
ID: Monocarboxylates

unificationXref24007
type: unificationXref
DB: CapCyc
ID: AMIDASE-RXN

phys-ent-participant23959
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23957
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23957
type: protein
NAME: AMIDASE
ORGANISM: bioSource20982
XREF: unificationXref23958

unificationXref23958
type: unificationXref
DB: CapCyc
ID: SGNU197996-MONOMER

unificationXref24023
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-250

catalysis24020
type: catalysis
CONTROLLED: biochemicalReaction24006
CONTROLLER: phys-ent-participant23954
NAME: AMIDASE
XREF: unificationXref24021

phys-ent-participant23954
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23952
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23952
type: protein
NAME: AMIDASE
ORGANISM: bioSource20982
XREF: unificationXref23953

unificationXref23953
type: unificationXref
DB: CapCyc
ID: SGNU201061-MONOMER

unificationXref24021
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-462

catalysis24018
type: catalysis
CONTROLLED: biochemicalReaction24006
CONTROLLER: phys-ent-participant23949
NAME: AMIDASE
XREF: unificationXref24019

phys-ent-participant23949
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23947
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23947
type: protein
NAME: AMIDASE
ORGANISM: bioSource20982
XREF: unificationXref23948

unificationXref23948
type: unificationXref
DB: CapCyc
ID: SGNU203222-MONOMER

unificationXref24019
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-604

catalysis24016
type: catalysis
CONTROLLED: biochemicalReaction24006
CONTROLLER: phys-ent-participant23944
NAME: AMIDASE
XREF: unificationXref24017

phys-ent-participant23944
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23942
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23942
type: protein
NAME: AMIDASE
ORGANISM: bioSource20982
XREF: unificationXref23943

unificationXref23943
type: unificationXref
DB: CapCyc
ID: SGNU204008-MONOMER

unificationXref24017
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-656

catalysis23989
type: catalysis
CONTROLLED: biochemicalReaction23980
CONTROLLER: phys-ent-participant23993
NAME: L-ASPARAGINASE
XREF: unificationXref23990

biochemicalReaction23980
type: biochemicalReaction
EC-NUMBER: 3.5.1.1
LEFT: phys-ent-participant23988
LEFT: phys-ent-participant20951
NAME: Asparaginase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant21246
SYNONYMS: L ASPARAGINASE L ASPARAGINE AMIDOHYDROLASE
SYNONYMS: L-asparagine amidohydrolase
SYNONYMS: L-asparaginase
XREF: unificationXref23981

phys-ent-participant23988
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23982
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23982
type: smallMolecule
MOLECULAR-WEIGHT: 132.119
NAME: L-asparagine
STRUCTURE: chemicalStructure23987
SYNONYMS: asparagine
SYNONYMS: α-aminosuccinamic acid
SYNONYMS: (-)-asparagine
SYNONYMS: (S)-2,4-diamino-4-oxobutanoic acid
SYNONYMS: (S)-asparagine
SYNONYMS: 2,4-diamino-4-oxobutanoic acid, (S)-
SYNONYMS: 2-aminosuccinamic acid, L-
SYNONYMS: agedoite
SYNONYMS: altheine
SYNONYMS: asparagine acid
SYNONYMS: aspartic acid β-amide
SYNONYMS: butanoic acid, 2,4-diamino-4-oxo-, (S)-
SYNONYMS: L-2,4-diamino-4-oxobutanoic acid
SYNONYMS: L-asparatamine
SYNONYMS: L-β-asparagine
XREF: unificationXref23986
XREF: unificationXref23985
XREF: unificationXref23984
XREF: unificationXref23983

chemicalStructure23987
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ASN-atom1" elementType="N" x2="0.0" y2="-2.7979"/> <atom id="ASN-atom2" elementType="N" x2="4.8542" y2="-2.7979"/> <atom id="ASN-atom3" elementType="O" x2="1.2095" y2="-0.6853"/> <atom id="ASN-atom4" elementType="O" x2="2.4433" y2="0.0"/> <atom id="ASN-atom5" elementType="O" x2="4.8461" y2="-0.008"/> <atom id="ASN-atom6" elementType="C" x2="2.427" y2="-2.806"/> <atom id="ASN-atom7" elementType="C" x2="1.2095" y2="-2.0883"/> <atom id="ASN-atom8" elementType="C" x2="3.6447" y2="-0.7257"/> <atom id="ASN-atom9" elementType="C" x2="3.6447" y2="-2.0883"/> <bond id="ASN-bond1" atomRefs="ASN-atom8 ASN-atom9" order="1"/> <bond id="ASN-bond2" atomRefs="ASN-atom6 ASN-atom9" order="1"/> <bond id="ASN-bond3" atomRefs="ASN-atom6 ASN-atom7" order="1"/> <bond id="ASN-bond4" atomRefs="ASN-atom5 ASN-atom8" order="1"/> <bond id="ASN-bond5" atomRefs="ASN-atom4 ASN-atom8" order="2"/> <bond id="ASN-bond6" atomRefs="ASN-atom3 ASN-atom7" order="2"/> <bond id="ASN-bond7" atomRefs="ASN-atom9 ASN-atom2" order="1"/> <bond id="ASN-bond8" atomRefs="ASN-atom1 ASN-atom7" order="1"/> <formula concise="C 4 H 8 N 2 O 3" formalCharge="0"/> 132.119 C(N)(=O)CC(N)C(O)=O

unificationXref23986
type: unificationXref
DB: CapCyc
ID: ASN

unificationXref23985
type: unificationXref
DB: CAS
ID: 7006-34-0

unificationXref23984
type: unificationXref
DB: CAS
ID: 70-47-3

unificationXref23983
type: unificationXref
DB: LIGAND
ID: C00152

unificationXref23981
type: unificationXref
DB: CapCyc
ID: ASPARAGHYD-RXN

phys-ent-participant23993
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23991
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23991
type: protein
NAME: L-ASPARAGINASE
ORGANISM: bioSource20982
XREF: unificationXref23992

unificationXref23992
type: unificationXref
DB: CapCyc
ID: SGNU196433-MONOMER

unificationXref23990
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-60

catalysis23968
type: catalysis
CONTROLLED: biochemicalReaction23960
CONTROLLER: phys-ent-participant23959
NAME: AMIDASE
XREF: unificationXref23969

biochemicalReaction23960
type: biochemicalReaction
EC-NUMBER: 3.5.1.4
LEFT: phys-ent-participant22738
LEFT: phys-ent-participant20951
NAME: Amidase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant23700
RIGHT: phys-ent-participant20964
SYNONYMS: Acylase
SYNONYMS: Acylamidase
XREF: unificationXref23961

phys-ent-participant22738
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22734
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22734
type: smallMolecule
MOLECULAR-WEIGHT: 71.079
NAME: acrylamide
STRUCTURE: chemicalStructure22737
XREF: unificationXref22736
XREF: unificationXref22735

chemicalStructure22737
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACRYLAMIDE-atom1" elementType="C" x2="2.866" y2="0.25"/> <atom id="ACRYLAMIDE-atom2" elementType="C" x2="3.7321" y2="0.75"/> <atom id="ACRYLAMIDE-atom3" elementType="N" x2="2.0" y2="0.75"/> <atom id="ACRYLAMIDE-atom4" elementType="O" x2="2.866" y2="-0.75"/> <atom id="ACRYLAMIDE-atom5" elementType="C" x2="4.5981" y2="0.25"/> <bond id="ACRYLAMIDE-bond1" atomRefs="ACRYLAMIDE-atom1 ACRYLAMIDE-atom2" order="1"/> <bond id="ACRYLAMIDE-bond2" atomRefs="ACRYLAMIDE-atom1 ACRYLAMIDE-atom3" order="1"/> <bond id="ACRYLAMIDE-bond3" atomRefs="ACRYLAMIDE-atom1 ACRYLAMIDE-atom4" order="2"/> <bond id="ACRYLAMIDE-bond4" atomRefs="ACRYLAMIDE-atom2 ACRYLAMIDE-atom5" order="2"/> <formula concise="C 3 H 5 N 1 O 1" formalCharge="0"/> 71.079 C(=O)(N)C=C

unificationXref22736
type: unificationXref
DB: CapCyc
ID: ACRYLAMIDE

unificationXref22735
type: unificationXref
DB: NCI
ID: 7785

phys-ent-participant23700
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23697
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23697
type: smallMolecule
MOLECULAR-WEIGHT: 72.063
NAME: acrylate
STRUCTURE: chemicalStructure23699
XREF: unificationXref23698

chemicalStructure23699
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ACRYLATE-atom1" elementType="C" x2="-0.3333333" y2="-0.23106056"/> <atom id="ACRYLATE-atom2" elementType="C" x2="0.33333337" y2="0.15151525"/> <atom id="ACRYLATE-atom3" elementType="O" x2="-1.0" y2="0.15151525"/> <atom id="ACRYLATE-atom4" elementType="O" x2="-0.3333333" y2="-1.0"/> <atom id="ACRYLATE-atom5" elementType="C" x2="0.9962121" y2="-0.23106056"/> <bond id="ACRYLATE-bond1" atomRefs="ACRYLATE-atom2 ACRYLATE-atom5" order="2"/> <bond id="ACRYLATE-bond2" atomRefs="ACRYLATE-atom1 ACRYLATE-atom4" order="2"/> <bond id="ACRYLATE-bond3" atomRefs="ACRYLATE-atom1 ACRYLATE-atom3" order="1"/> <bond id="ACRYLATE-bond4" atomRefs="ACRYLATE-atom1 ACRYLATE-atom2" order="1"/> <formula concise="C 3 H 4 O 2" formalCharge="0"/> 72.063 C(O)(=O)C=C

unificationXref23698
type: unificationXref
DB: CapCyc
ID: ACRYLATE

unificationXref23961
type: unificationXref
DB: CapCyc
ID: R311-RXN

unificationXref23969
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-252

catalysis23966
type: catalysis
CONTROLLED: biochemicalReaction23960
CONTROLLER: phys-ent-participant23954
NAME: AMIDASE
XREF: unificationXref23967

unificationXref23967
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-464

catalysis23964
type: catalysis
CONTROLLED: biochemicalReaction23960
CONTROLLER: phys-ent-participant23949
NAME: AMIDASE
XREF: unificationXref23965

unificationXref23965
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-606

catalysis23962
type: catalysis
CONTROLLED: biochemicalReaction23960
CONTROLLER: phys-ent-participant23944
NAME: AMIDASE
XREF: unificationXref23963

unificationXref23963
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-658

catalysis23955
type: catalysis
CONTROLLED: biochemicalReaction23932
CONTROLLER: phys-ent-participant23959
NAME: AMIDASE
XREF: unificationXref23956

biochemicalReaction23932
type: biochemicalReaction
EC-NUMBER: 3.5.1.4
LEFT: phys-ent-participant22719
LEFT: phys-ent-participant20951
NAME: Amidase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant23939
SYNONYMS: Acylase
SYNONYMS: Acylamidase
XREF: unificationXref23933

phys-ent-participant22719
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22714
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22714
type: smallMolecule
MOLECULAR-WEIGHT: 122.126
NAME: nicotinamide
STRUCTURE: chemicalStructure22718
SYNONYMS: 6-aminonicotinamide
SYNONYMS: vitamin PP
SYNONYMS: niacinamide
XREF: unificationXref22717
XREF: unificationXref22716
XREF: unificationXref22715

chemicalStructure22718
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NIACINAMIDE-atom1" elementType="O" x2="0.99671" y2="-0.14333"/> <atom id="NIACINAMIDE-atom2" elementType="N" x2="0.49588" y2="0.71005"/> <atom id="NIACINAMIDE-atom3" elementType="C" x2="-1.0" y2="-0.71334"/> <atom id="NIACINAMIDE-atom4" elementType="C" x2="-0.00165" y2="-0.13344"/> <atom id="NIACINAMIDE-atom5" elementType="C" x2="-0.00165" y2="-0.71993"/> <atom id="NIACINAMIDE-atom6" elementType="C" x2="-1.0" y2="-0.13344"/> <atom id="NIACINAMIDE-atom7" elementType="C" x2="-0.49588" y2="0.13674"/> <atom id="NIACINAMIDE-atom8" elementType="C" x2="0.49588" y2="0.13674"/> <atom id="NIACINAMIDE-atom9" elementType="N" x2="-0.50577" y2="-1.0"/> <bond id="NIACINAMIDE-bond1" atomRefs="NIACINAMIDE-atom9 NIACINAMIDE-atom5" order="A"/> <bond id="NIACINAMIDE-bond2" atomRefs="NIACINAMIDE-atom4 NIACINAMIDE-atom7" order="A"/> <bond id="NIACINAMIDE-bond3" atomRefs="NIACINAMIDE-atom7 NIACINAMIDE-atom6" order="A"/> <bond id="NIACINAMIDE-bond4" atomRefs="NIACINAMIDE-atom5 NIACINAMIDE-atom4" order="A"/> <bond id="NIACINAMIDE-bond5" atomRefs="NIACINAMIDE-atom4 NIACINAMIDE-atom8" order="1"/> <bond id="NIACINAMIDE-bond6" atomRefs="NIACINAMIDE-atom6 NIACINAMIDE-atom3" order="A"/> <bond id="NIACINAMIDE-bond7" atomRefs="NIACINAMIDE-atom3 NIACINAMIDE-atom9" order="A"/> <bond id="NIACINAMIDE-bond8" atomRefs="NIACINAMIDE-atom2 NIACINAMIDE-atom8" order="1"/> <bond id="NIACINAMIDE-bond9" atomRefs="NIACINAMIDE-atom1 NIACINAMIDE-atom8" order="2"/> <formula concise="C 6 H 6 N 2 O 1" formalCharge="0"/> 122.126 c1(ccc(cn1)C(N)=O)

unificationXref22717
type: unificationXref
DB: CapCyc
ID: NIACINAMIDE

unificationXref22716
type: unificationXref
DB: CAS
ID: 98-92-0

unificationXref22715
type: unificationXref
DB: LIGAND
ID: C00153

phys-ent-participant23939
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23934
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23934
type: smallMolecule
MOLECULAR-WEIGHT: 122.103
NAME: nicotinate
STRUCTURE: chemicalStructure23938
SYNONYMS: 3-pyridinecarboxylic acid
SYNONYMS: nicotinic acid
SYNONYMS: wampocap
SYNONYMS: nicolar
SYNONYMS: nicocap
SYNONYMS: nicobid
SYNONYMS: nico-400-
SYNONYMS: nicamin
SYNONYMS: niacin
SYNONYMS: niacine
SYNONYMS: vitamin B3
XREF: unificationXref23937
XREF: unificationXref23936
XREF: unificationXref23935

chemicalStructure23938
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="NIACINE-atom1" elementType="C" x2="-1.0" y2="-0.7184466"/> <atom id="NIACINE-atom2" elementType="C" x2="-1.0" y2="-0.14563107"/> <atom id="NIACINE-atom3" elementType="C" x2="0.49514568" y2="0.1504854"/> <atom id="NIACINE-atom4" elementType="C" x2="-0.014563084" y2="-0.70873785"/> <atom id="NIACINE-atom5" elementType="N" x2="-0.5048543" y2="-1.0"/> <atom id="NIACINE-atom6" elementType="C" x2="-0.014563084" y2="-0.1407767"/> <atom id="NIACINE-atom7" elementType="C" x2="-0.50970876" y2="0.14563107"/> <atom id="NIACINE-atom8" elementType="O" x2="0.9951457" y2="-0.13106793"/> <atom id="NIACINE-atom9" elementType="O" x2="0.49514568" y2="0.72330093" formalCharge="-1"/> <bond id="NIACINE-bond1" atomRefs="NIACINE-atom9 NIACINE-atom3" order="1"/> <bond id="NIACINE-bond2" atomRefs="NIACINE-atom8 NIACINE-atom3" order="2"/> <bond id="NIACINE-bond3" atomRefs="NIACINE-atom7 NIACINE-atom2" order="A"/> <bond id="NIACINE-bond4" atomRefs="NIACINE-atom6 NIACINE-atom3" order="1"/> <bond id="NIACINE-bond5" atomRefs="NIACINE-atom6 NIACINE-atom7" order="A"/> <bond id="NIACINE-bond6" atomRefs="NIACINE-atom5 NIACINE-atom4" order="A"/> <bond id="NIACINE-bond7" atomRefs="NIACINE-atom4 NIACINE-atom6" order="A"/> <bond id="NIACINE-bond8" atomRefs="NIACINE-atom2 NIACINE-atom1" order="A"/> <bond id="NIACINE-bond9" atomRefs="NIACINE-atom1 NIACINE-atom5" order="A"/> <formula concise="C 6 H 4 N 1 O 2" formalCharge="0"/> 122.103 c1(ccc(C([O-])=O)cn1) 3-pyridinecarboxylic acid

unificationXref23937
type: unificationXref
DB: CapCyc
ID: NIACINE

unificationXref23936
type: unificationXref
DB: CAS
ID: 59-67-6

unificationXref23935
type: unificationXref
DB: LIGAND
ID: C00253

unificationXref23933
type: unificationXref
DB: CapCyc
ID: R314-RXN

unificationXref23956
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-251

catalysis23950
type: catalysis
CONTROLLED: biochemicalReaction23932
CONTROLLER: phys-ent-participant23954
NAME: AMIDASE
XREF: unificationXref23951

unificationXref23951
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-463

catalysis23945
type: catalysis
CONTROLLED: biochemicalReaction23932
CONTROLLER: phys-ent-participant23949
NAME: AMIDASE
XREF: unificationXref23946

unificationXref23946
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-605

catalysis23940
type: catalysis
CONTROLLED: biochemicalReaction23932
CONTROLLER: phys-ent-participant23944
NAME: AMIDASE
XREF: unificationXref23941

unificationXref23941
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-657

catalysis23861
type: catalysis
CONTROLLED: biochemicalReaction23857
CONTROLLER: phys-ent-participant23854
NAME: ARGINASE
XREF: unificationXref23862

biochemicalReaction23857
type: biochemicalReaction
EC-NUMBER: 3.5.3.1
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant22458
NAME: Arginase
RIGHT: phys-ent-participant23844
RIGHT: phys-ent-participant23426
SYNONYMS: Canavanase
SYNONYMS: Arginine amidinase
XREF: unificationXref23858

phys-ent-participant22458
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22452
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22452
type: smallMolecule
MOLECULAR-WEIGHT: 174.202
NAME: L-arginine
STRUCTURE: chemicalStructure22457
SYNONYMS: 2-amino-5-guanidinovaleric acid
SYNONYMS: R
SYNONYMS: arginine
SYNONYMS: arg
XREF: unificationXref22456
XREF: unificationXref22455
XREF: unificationXref22454
XREF: unificationXref22453

chemicalStructure22457
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="ARG-atom1" elementType="H" x2="6.5399" y2="-3.3321"/> <atom id="ARG-atom2" elementType="N" x2="0.0" y2="-2.1009"/> <atom id="ARG-atom3" elementType="N" x2="1.2086" y2="0.0"/> <atom id="ARG-atom4" elementType="N" x2="7.9631" y2="-0.8697"/> <atom id="ARG-atom5" elementType="O" x2="9.6913" y2="-2.1348"/> <atom id="ARG-atom6" elementType="O" x2="8.4827" y2="-4.2018"/> <atom id="ARG-atom7" elementType="C" x2="4.8343" y2="-2.1009"/> <atom id="ARG-atom8" elementType="C" x2="3.6258" y2="-1.4119"/> <atom id="ARG-atom9" elementType="C" x2="6.0429" y2="-1.4119"/> <atom id="ARG-atom10" elementType="N" x2="2.4172" y2="-2.1009"/> <atom id="ARG-atom11" elementType="C" x2="1.2086" y2="-1.4119"/> <atom id="ARG-atom12" elementType="C" x2="8.4827" y2="-2.8238"/> <atom id="ARG-atom13" elementType="C" x2="7.2515" y2="-2.1009"/> <bond id="ARG-bond1" atomRefs="ARG-atom12 ARG-atom13" order="1"/> <bond id="ARG-bond2" atomRefs="ARG-atom10 ARG-atom11" order="1"/> <bond id="ARG-bond3" atomRefs="ARG-atom9 ARG-atom13" order="1"/> <bond id="ARG-bond4" atomRefs="ARG-atom8 ARG-atom10" order="1"/> <bond id="ARG-bond5" atomRefs="ARG-atom7 ARG-atom9" order="1"/> <bond id="ARG-bond6" atomRefs="ARG-atom7 ARG-atom8" order="1"/> <bond id="ARG-bond7" atomRefs="ARG-atom6 ARG-atom12" order="1"/> <bond id="ARG-bond8" atomRefs="ARG-atom5 ARG-atom12" order="2"/> <bond id="ARG-bond9" atomRefs="ARG-atom4 ARG-atom13" order="1"/> <bond id="ARG-bond10" atomRefs="ARG-atom3 ARG-atom11" order="1"/> <bond id="ARG-bond11" atomRefs="ARG-atom2 ARG-atom11" order="2"/> <bond id="ARG-bond12" atomRefs="ARG-atom1 ARG-atom13" order="1"/> <formula concise="C 6 H 14 N 4 O 2" formalCharge="0"/> 174.202 C(NC(N)=N)CC[CH](N)C(O)=O

unificationXref22456
type: unificationXref
DB: CapCyc
ID: ARG

unificationXref22455
type: unificationXref
DB: CAS
ID: 7004-12-8

unificationXref22454
type: unificationXref
DB: CAS
ID: 74-79-3

unificationXref22453
type: unificationXref
DB: LIGAND
ID: C00062

phys-ent-participant23844
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23839
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23839
type: smallMolecule
MOLECULAR-WEIGHT: 60.055
NAME: urea
STRUCTURE: chemicalStructure23843
SYNONYMS: bromisovalum
SYNONYMS: carmol
SYNONYMS: basodexan
SYNONYMS: carbamide
XREF: unificationXref23842
XREF: unificationXref23841
XREF: unificationXref23840

chemicalStructure23843
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UREA-atom1" elementType="C" x2="-0.47935" y2="-0.02693"/> <atom id="UREA-atom2" elementType="O" x2="0.62657" y2="-0.02693"/> <atom id="UREA-atom3" elementType="N" x2="-0.89946" y2="0.99641"/> <atom id="UREA-atom4" elementType="N" x2="-1.0" y2="-1.0"/> <bond id="UREA-bond1" atomRefs="UREA-atom4 UREA-atom1" order="1"/> <bond id="UREA-bond2" atomRefs="UREA-atom3 UREA-atom1" order="1"/> <bond id="UREA-bond3" atomRefs="UREA-atom2 UREA-atom1" order="2"/> <formula concise="C 1 H 4 N 2 O 1" formalCharge="0"/> 60.055 C(N)(N)=O

unificationXref23842
type: unificationXref
DB: CapCyc
ID: UREA

unificationXref23841
type: unificationXref
DB: CAS
ID: 57-13-6

unificationXref23840
type: unificationXref
DB: LIGAND
ID: C00086

phys-ent-participant23426
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23420
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23420
type: smallMolecule
MOLECULAR-WEIGHT: 132.162
NAME: L-ornithine
STRUCTURE: chemicalStructure23425
SYNONYMS: Ornithine
SYNONYMS: 2, 5-diaminovaleric acid
SYNONYMS: 2, 5-diaminopentanoic acid
SYNONYMS: 2, 5-diaminopentanoate
SYNONYMS: α,δ-diaminovaleric acid
XREF: unificationXref23424
XREF: unificationXref23423
XREF: unificationXref23422
XREF: unificationXref23421

chemicalStructure23425
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-ORNITHINE-atom1" elementType="N" x2="7.2915" y2="-2.0917"/> <atom id="L-ORNITHINE-atom2" elementType="N" x2="2.4186" y2="-3.4823"/> <atom id="L-ORNITHINE-atom3" elementType="O" x2="1.2091" y2="0.0"/> <atom id="L-ORNITHINE-atom4" elementType="O" x2="0.0" y2="-2.0917"/> <atom id="L-ORNITHINE-atom5" elementType="C" x2="6.0824" y2="-1.3902"/> <atom id="L-ORNITHINE-atom6" elementType="C" x2="4.8609" y2="-2.0917"/> <atom id="L-ORNITHINE-atom7" elementType="C" x2="3.6397" y2="-1.3902"/> <atom id="L-ORNITHINE-atom8" elementType="C" x2="1.2091" y2="-1.3902"/> <atom id="L-ORNITHINE-atom9" elementType="C" x2="2.4186" y2="-2.0917"/> <bond id="L-ORNITHINE-bond1" atomRefs="L-ORNITHINE-atom8 L-ORNITHINE-atom9" order="1"/> <bond id="L-ORNITHINE-bond2" atomRefs="L-ORNITHINE-atom9 L-ORNITHINE-atom7" order="1"/> <bond id="L-ORNITHINE-bond3" atomRefs="L-ORNITHINE-atom6 L-ORNITHINE-atom7" order="1"/> <bond id="L-ORNITHINE-bond4" atomRefs="L-ORNITHINE-atom5 L-ORNITHINE-atom6" order="1"/> <bond id="L-ORNITHINE-bond5" atomRefs="L-ORNITHINE-atom4 L-ORNITHINE-atom8" order="1"/> <bond id="L-ORNITHINE-bond6" atomRefs="L-ORNITHINE-atom3 L-ORNITHINE-atom8" order="2"/> <bond id="L-ORNITHINE-bond7" atomRefs="L-ORNITHINE-atom2 L-ORNITHINE-atom9" order="1"/> <bond id="L-ORNITHINE-bond8" atomRefs="L-ORNITHINE-atom1 L-ORNITHINE-atom5" order="1"/> <formula concise="C 5 H 12 N 2 O 2" formalCharge="0"/> 132.162 C(N)CCC(N)C(O)=O

unificationXref23424
type: unificationXref
DB: CapCyc
ID: L-ORNITHINE

unificationXref23423
type: unificationXref
DB: CAS
ID: 7006-33-9

unificationXref23422
type: unificationXref
DB: CAS
ID: 70-26-8

unificationXref23421
type: unificationXref
DB: LIGAND
ID: C01602

unificationXref23858
type: unificationXref
DB: CapCyc
ID: ARGINASE-RXN

phys-ent-participant23854
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23852
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23852
type: protein
NAME: ARGINASE
ORGANISM: bioSource20982
XREF: unificationXref23853

unificationXref23853
type: unificationXref
DB: CapCyc
ID: SGNU198609-MONOMER

unificationXref23862
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-307

catalysis23859
type: catalysis
CONTROLLED: biochemicalReaction23857
CONTROLLER: phys-ent-participant23849
NAME: ARGINASE
XREF: unificationXref23860

phys-ent-participant23849
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23847
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23847
type: protein
NAME: ARGINASE
ORGANISM: bioSource20982
XREF: unificationXref23848

unificationXref23848
type: unificationXref
DB: CapCyc
ID: SGNU200630-MONOMER

unificationXref23860
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-433

catalysis23850
type: catalysis
CONTROLLED: biochemicalReaction23827
CONTROLLER: phys-ent-participant23854
NAME: ARGINASE
XREF: unificationXref23851

biochemicalReaction23827
type: biochemicalReaction
EC-NUMBER: 3.5.3.1
LEFT: phys-ent-participant23833
LEFT: phys-ent-participant20951
NAME: RXN-34
RIGHT: phys-ent-participant23838
RIGHT: phys-ent-participant23844
XREF: unificationXref23828

phys-ent-participant23833
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23829
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23829
type: smallMolecule
MOLECULAR-WEIGHT: 176.175
NAME: canavanine
STRUCTURE: chemicalStructure23832
SYNONYMS: L-canavanine
SYNONYMS: 2-amino-4-(guanidinooxy)butyrate
SYNONYMS: 2-amino-4-(guanidinooxy)butyric acid
XREF: unificationXref23831
XREF: unificationXref23830

chemicalStructure23832
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CANAVANINE-atom1" elementType="N" x2="9.6996" y2="-1.4004"/> <atom id="CANAVANINE-atom2" elementType="N" x2="8.4869" y2="-3.5003"/> <atom id="CANAVANINE-atom3" elementType="N" x2="2.4249" y2="0.0"/> <atom id="CANAVANINE-atom4" elementType="O" x2="1.2124" y2="-3.5"/> <atom id="CANAVANINE-atom5" elementType="O" x2="0.0" y2="-1.4"/> <atom id="CANAVANINE-atom6" elementType="C" x2="4.8497" y2="-1.4"/> <atom id="CANAVANINE-atom7" elementType="C" x2="3.6373" y2="-2.1"/> <atom id="CANAVANINE-atom8" elementType="N" x2="7.2747" y2="-1.4001"/> <atom id="CANAVANINE-atom9" elementType="O" x2="6.0621" y2="-2.1"/> <atom id="CANAVANINE-atom10" elementType="C" x2="8.4871" y2="-2.1003"/> <atom id="CANAVANINE-atom11" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="CANAVANINE-atom12" elementType="C" x2="2.4248" y2="-1.4"/> <bond id="CANAVANINE-bond1" atomRefs="CANAVANINE-atom11 CANAVANINE-atom12" order="1"/> <bond id="CANAVANINE-bond2" atomRefs="CANAVANINE-atom8 CANAVANINE-atom10" order="1"/> <bond id="CANAVANINE-bond3" atomRefs="CANAVANINE-atom8 CANAVANINE-atom9" order="1"/> <bond id="CANAVANINE-bond4" atomRefs="CANAVANINE-atom7 CANAVANINE-atom12" order="1"/> <bond id="CANAVANINE-bond5" atomRefs="CANAVANINE-atom6 CANAVANINE-atom9" order="1"/> <bond id="CANAVANINE-bond6" atomRefs="CANAVANINE-atom6 CANAVANINE-atom7" order="1"/> <bond id="CANAVANINE-bond7" atomRefs="CANAVANINE-atom5 CANAVANINE-atom11" order="1"/> <bond id="CANAVANINE-bond8" atomRefs="CANAVANINE-atom4 CANAVANINE-atom11" order="2"/> <bond id="CANAVANINE-bond9" atomRefs="CANAVANINE-atom3 CANAVANINE-atom12" order="1"/> <bond id="CANAVANINE-bond10" atomRefs="CANAVANINE-atom2 CANAVANINE-atom10" order="1"/> <bond id="CANAVANINE-bond11" atomRefs="CANAVANINE-atom1 CANAVANINE-atom10" order="2"/> <formula concise="C 5 H 12 N 4 O 3" formalCharge="0"/> 176.175 C(ONC(N)=N)CC(N)C(O)=O

unificationXref23831
type: unificationXref
DB: CapCyc
ID: CANAVANINE

unificationXref23830
type: unificationXref
DB: CAS
ID: 543-38-4

phys-ent-participant23838
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23834
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23834
type: smallMolecule
MOLECULAR-WEIGHT: 134.135
NAME: L-canaline
STRUCTURE: chemicalStructure23837
SYNONYMS: L-a-amino-g-(aminooxy)-n-butyric acid
SYNONYMS: L-2-amino-4-(aminooxy)butyric acid
SYNONYMS: L-2-amino-4-(aminooxy)butyrate
XREF: unificationXref23836
XREF: unificationXref23835

chemicalStructure23837
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="L-CANALINE-atom1" elementType="N" x2="0.0" y2="0.0"/> <atom id="L-CANALINE-atom2" elementType="N" x2="1.2123" y2="-4.9"/> <atom id="L-CANALINE-atom3" elementType="O" x2="3.6372" y2="-6.3"/> <atom id="L-CANALINE-atom4" elementType="O" x2="4.8497" y2="-4.2"/> <atom id="L-CANALINE-atom5" elementType="C" x2="1.2124" y2="-2.1"/> <atom id="L-CANALINE-atom6" elementType="C" x2="2.4248" y2="-2.8"/> <atom id="L-CANALINE-atom7" elementType="O" x2="1.2124" y2="-0.7"/> <atom id="L-CANALINE-atom8" elementType="C" x2="3.6372" y2="-4.9"/> <atom id="L-CANALINE-atom9" elementType="C" x2="2.4248" y2="-4.2"/> <bond id="L-CANALINE-bond1" atomRefs="L-CANALINE-atom8 L-CANALINE-atom9" order="1"/> <bond id="L-CANALINE-bond2" atomRefs="L-CANALINE-atom6 L-CANALINE-atom9" order="1"/> <bond id="L-CANALINE-bond3" atomRefs="L-CANALINE-atom5 L-CANALINE-atom7" order="1"/> <bond id="L-CANALINE-bond4" atomRefs="L-CANALINE-atom5 L-CANALINE-atom6" order="1"/> <bond id="L-CANALINE-bond5" atomRefs="L-CANALINE-atom4 L-CANALINE-atom8" order="1"/> <bond id="L-CANALINE-bond6" atomRefs="L-CANALINE-atom3 L-CANALINE-atom8" order="2"/> <bond id="L-CANALINE-bond7" atomRefs="L-CANALINE-atom9 L-CANALINE-atom2" order="1"/> <bond id="L-CANALINE-bond8" atomRefs="L-CANALINE-atom1 L-CANALINE-atom7" order="1"/> <formula concise="C 4 H 10 N 2 O 3" formalCharge="0"/> 134.135 C(ON)CC(N)C(O)=O

unificationXref23836
type: unificationXref
DB: CapCyc
ID: L-CANALINE

unificationXref23835
type: unificationXref
DB: CAS
ID: 496-93-5

unificationXref23828
type: unificationXref
DB: CapCyc
ID: RXN-34

unificationXref23851
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-308

catalysis23845
type: catalysis
CONTROLLED: biochemicalReaction23827
CONTROLLER: phys-ent-participant23849
NAME: ARGINASE
XREF: unificationXref23846

unificationXref23846
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-434

catalysis23795
type: catalysis
CONTROLLED: biochemicalReaction23777
CONTROLLER: phys-ent-participant23776
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23796

biochemicalReaction23777
type: biochemicalReaction
EC-NUMBER: 3.5.4.5
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant23784
NAME: Cytidine deaminase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant23790
SYNONYMS: Cytosine nucleoside deaminase
SYNONYMS: Cytidine aminohydrolase
XREF: unificationXref23778

phys-ent-participant23784
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23779
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23779
type: smallMolecule
MOLECULAR-WEIGHT: 227.219
NAME: deoxycytidine
STRUCTURE: chemicalStructure23783
SYNONYMS: d-cytidine
SYNONYMS: 2'-deoxycytidine
XREF: unificationXref23782
XREF: unificationXref23781
XREF: unificationXref23780

chemicalStructure23783
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DEOXYCYTIDINE-atom1" elementType="N" x2="5.5499" y2="-8.3319"/> <atom id="DEOXYCYTIDINE-atom2" elementType="O" x2="3.2191" y2="-4.2846"/> <atom id="DEOXYCYTIDINE-atom3" elementType="O" x2="0.0" y2="-1.8983"/> <atom id="DEOXYCYTIDINE-atom4" elementType="O" x2="1.8956" y2="0.0"/> <atom id="DEOXYCYTIDINE-atom5" elementType="C" x2="6.7342" y2="-6.313"/> <atom id="DEOXYCYTIDINE-atom6" elementType="C" x2="6.7342" y2="-4.952"/> <atom id="DEOXYCYTIDINE-atom7" elementType="C" x2="1.0039" y2="-2.7949"/> <atom id="DEOXYCYTIDINE-atom8" elementType="C" x2="4.0439" y2="-1.0861"/> <atom id="DEOXYCYTIDINE-atom9" elementType="N" x2="4.3879" y2="-6.313"/> <atom id="DEOXYCYTIDINE-atom10" elementType="O" x2="3.3634" y2="-3.1574"/> <atom id="DEOXYCYTIDINE-atom11" elementType="C" x2="5.5535" y2="-6.9859"/> <atom id="DEOXYCYTIDINE-atom12" elementType="C" x2="4.3879" y2="-4.952"/> <atom id="DEOXYCYTIDINE-atom13" elementType="C" x2="2.6904" y2="-1.0861"/> <atom id="DEOXYCYTIDINE-atom14" elementType="C" x2="2.2822" y2="-2.3737"/> <atom id="DEOXYCYTIDINE-atom15" elementType="C" x2="4.4599" y2="-2.3737"/> <atom id="DEOXYCYTIDINE-atom16" elementType="N" x2="5.551" y2="-4.2612"/> <bond id="DEOXYCYTIDINE-bond1" atomRefs="DEOXYCYTIDINE-atom15 DEOXYCYTIDINE-atom16" order="1"/> <bond id="DEOXYCYTIDINE-bond2" atomRefs="DEOXYCYTIDINE-atom13 DEOXYCYTIDINE-atom14" order="1"/> <bond id="DEOXYCYTIDINE-bond3" atomRefs="DEOXYCYTIDINE-atom12 DEOXYCYTIDINE-atom16" order="A"/> <bond id="DEOXYCYTIDINE-bond4" atomRefs="DEOXYCYTIDINE-atom10 DEOXYCYTIDINE-atom15" order="1"/> <bond id="DEOXYCYTIDINE-bond5" atomRefs="DEOXYCYTIDINE-atom10 DEOXYCYTIDINE-atom14" order="1"/> <bond id="DEOXYCYTIDINE-bond6" atomRefs="DEOXYCYTIDINE-atom9 DEOXYCYTIDINE-atom12" order="A"/> <bond id="DEOXYCYTIDINE-bond7" atomRefs="DEOXYCYTIDINE-atom11 DEOXYCYTIDINE-atom9" order="A"/> <bond id="DEOXYCYTIDINE-bond8" atomRefs="DEOXYCYTIDINE-atom8 DEOXYCYTIDINE-atom15" order="1"/> <bond id="DEOXYCYTIDINE-bond9" atomRefs="DEOXYCYTIDINE-a…

unificationXref23782
type: unificationXref
DB: CapCyc
ID: DEOXYCYTIDINE

unificationXref23781
type: unificationXref
DB: CAS
ID: 951-77-9

unificationXref23780
type: unificationXref
DB: LIGAND
ID: C00881

phys-ent-participant23790
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23785
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23785
type: smallMolecule
MOLECULAR-WEIGHT: 228.204
NAME: deoxyuridine
STRUCTURE: chemicalStructure23789
SYNONYMS: 2-Deoxyuridine
XREF: unificationXref23788
XREF: unificationXref23787
XREF: unificationXref23786

chemicalStructure23789
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DEOXYURIDINE-atom1" elementType="H" x2="3.1823" y2="-7.0247"/> <atom id="DEOXYURIDINE-atom2" elementType="O" x2="5.5499" y2="-8.3319"/> <atom id="DEOXYURIDINE-atom3" elementType="O" x2="3.2191" y2="-4.2846"/> <atom id="DEOXYURIDINE-atom4" elementType="O" x2="0.0" y2="-1.8983"/> <atom id="DEOXYURIDINE-atom5" elementType="O" x2="1.8956" y2="0.0"/> <atom id="DEOXYURIDINE-atom6" elementType="C" x2="6.7342" y2="-6.313"/> <atom id="DEOXYURIDINE-atom7" elementType="C" x2="6.7342" y2="-4.952"/> <atom id="DEOXYURIDINE-atom8" elementType="C" x2="1.0039" y2="-2.7949"/> <atom id="DEOXYURIDINE-atom9" elementType="C" x2="4.0439" y2="-1.0861"/> <atom id="DEOXYURIDINE-atom10" elementType="O" x2="3.3634" y2="-3.1574"/> <atom id="DEOXYURIDINE-atom11" elementType="C" x2="5.5535" y2="-6.9859"/> <atom id="DEOXYURIDINE-atom12" elementType="C" x2="4.3879" y2="-4.952"/> <atom id="DEOXYURIDINE-atom13" elementType="C" x2="2.6904" y2="-1.0861"/> <atom id="DEOXYURIDINE-atom14" elementType="C" x2="2.2822" y2="-2.3737"/> <atom id="DEOXYURIDINE-atom15" elementType="C" x2="4.4599" y2="-2.3737"/> <atom id="DEOXYURIDINE-atom16" elementType="N" x2="4.3879" y2="-6.313"/> <atom id="DEOXYURIDINE-atom17" elementType="N" x2="5.551" y2="-4.2612"/> <bond id="DEOXYURIDINE-bond1" atomRefs="DEOXYURIDINE-atom15 DEOXYURIDINE-atom17" order="1"/> <bond id="DEOXYURIDINE-bond2" atomRefs="DEOXYURIDINE-atom13 DEOXYURIDINE-atom14" order="1"/> <bond id="DEOXYURIDINE-bond3" atomRefs="DEOXYURIDINE-atom12 DEOXYURIDINE-atom17" order="A"/> <bond id="DEOXYURIDINE-bond4" atomRefs="DEOXYURIDINE-atom16 DEOXYURIDINE-atom12" order="A"/> <bond id="DEOXYURIDINE-bond5" atomRefs="DEOXYURIDINE-atom11 DEOXYURIDINE-atom16" order="A"/> <bond id="DEOXYURIDINE-bond6" atomRefs="DEOXYURIDINE-atom10 DEOXYURIDINE-atom15" order="1"/> <bond id="DEOXYURIDINE-bond7" atomRefs="DEOXYURIDINE-atom10 DEOXYURIDINE-atom14" order="1"/> <bond id="DEOXYURIDINE-bond8" atomRefs="DEOXYURIDINE-atom9 DEOXYURIDINE-atom15" order="1"/> <bond id="DEOXYURIDI…

unificationXref23788
type: unificationXref
DB: CapCyc
ID: DEOXYURIDINE

unificationXref23787
type: unificationXref
DB: CAS
ID: 951-78-0

unificationXref23786
type: unificationXref
DB: LIGAND
ID: C00526

unificationXref23778
type: unificationXref
DB: CapCyc
ID: CYTIDEAM-RXN

phys-ent-participant23776
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23774
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23774
type: protein
NAME: CYTIDINE DEAMINASE
ORGANISM: bioSource20982
XREF: unificationXref23775

unificationXref23775
type: unificationXref
DB: CapCyc
ID: SGNU198618-MONOMER

unificationXref23796
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-311

catalysis23793
type: catalysis
CONTROLLED: biochemicalReaction23777
CONTROLLER: phys-ent-participant23771
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23794

phys-ent-participant23771
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23769
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23769
type: protein
NAME: CYTIDINE DEAMINASE
ORGANISM: bioSource20982
XREF: unificationXref23770

unificationXref23770
type: unificationXref
DB: CapCyc
ID: SGNU201579-MONOMER

unificationXref23794
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-508

catalysis23791
type: catalysis
CONTROLLED: biochemicalReaction23777
CONTROLLER: phys-ent-participant23766
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23792

phys-ent-participant23766
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23764
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23764
type: protein
NAME: CYTIDINE DEAMINASE
ORGANISM: bioSource20982
XREF: unificationXref23765

unificationXref23765
type: unificationXref
DB: CapCyc
ID: SGNU204472-MONOMER

unificationXref23792
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-685

catalysis23772
type: catalysis
CONTROLLED: biochemicalReaction23748
CONTROLLER: phys-ent-participant23776
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23773

biochemicalReaction23748
type: biochemicalReaction
EC-NUMBER: 3.5.4.5
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant23755
NAME: Cytidine deaminase
RIGHT: phys-ent-participant21177
RIGHT: phys-ent-participant23761
SYNONYMS: Cytosine nucleoside deaminase
SYNONYMS: Cytidine aminohydrolase
XREF: unificationXref23749

phys-ent-participant23755
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23750
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23750
type: smallMolecule
MOLECULAR-WEIGHT: 243.219
NAME: cytidine
STRUCTURE: chemicalStructure23754
XREF: unificationXref23753
XREF: unificationXref23752
XREF: unificationXref23751

chemicalStructure23754
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CYTIDINE-atom1" elementType="H" x2="0.02783" y2="-0.67347"/> <atom id="CYTIDINE-atom2" elementType="C" x2="-0.53618" y2="-0.69202"/> <atom id="CYTIDINE-atom3" elementType="C" x2="-0.57699" y2="-0.3321"/> <atom id="CYTIDINE-atom4" elementType="O" x2="-0.1577" y2="-1.0"/> <atom id="CYTIDINE-atom5" elementType="N" x2="0.13915" y2="-0.0872"/> <atom id="CYTIDINE-atom6" elementType="O" x2="-0.23191" y2="-0.17254"/> <atom id="CYTIDINE-atom7" elementType="N" x2="-0.03154" y2="0.5436"/> <atom id="CYTIDINE-atom8" elementType="C" x2="0.02783" y2="-0.44712"/> <atom id="CYTIDINE-atom9" elementType="C" x2="0.6141" y2="0.36178"/> <atom id="CYTIDINE-atom10" elementType="N" x2="0.45826" y2="0.99629"/> <atom id="CYTIDINE-atom11" elementType="O" x2="-1.0" y2="-0.06122"/> <atom id="CYTIDINE-atom12" elementType="C" x2="0.50649" y2="0.00557"/> <atom id="CYTIDINE-atom13" elementType="H" x2="-0.20223" y2="-0.55102"/> <atom id="CYTIDINE-atom14" elementType="C" x2="-0.12801" y2="0.17254"/> <atom id="CYTIDINE-atom15" elementType="O" x2="-0.50278" y2="0.17254"/> <atom id="CYTIDINE-atom16" elementType="C" x2="0.35065" y2="0.63636"/> <atom id="CYTIDINE-atom17" elementType="C" x2="-0.1577" y2="-0.77365"/> <atom id="CYTIDINE-atom18" elementType="C" x2="-0.62523" y2="-0.06122"/> <atom id="CYTIDINE-atom19" elementType="H" x2="-0.43599" y2="-0.49165"/> <atom id="CYTIDINE-atom20" elementType="O" x2="-0.57699" y2="-0.91466"/> <atom id="CYTIDINE-atom21" elementType="H" x2="-0.68089" y2="-0.53247"/> <bond id="CYTIDINE-bond1" atomRefs="CYTIDINE-atom21 CYTIDINE-atom3" order="1"/> <bond id="CYTIDINE-bond2" atomRefs="CYTIDINE-atom20 CYTIDINE-atom2" order="1"/> <bond id="CYTIDINE-bond3" atomRefs="CYTIDINE-atom19 CYTIDINE-atom2" order="1"/> <bond id="CYTIDINE-bond4" atomRefs="CYTIDINE-atom18 CYTIDINE-atom3" order="1"/> <bond id="CYTIDINE-bond5" atomRefs="CYTIDINE-atom17 CYTIDINE-atom8" order="1"/> <bond id="CYTIDINE-bond6" atomRefs="CYTIDINE-atom7 CYTIDINE-atom16" order="A"/> <bond id="CYTIDINE-bond7…

unificationXref23753
type: unificationXref
DB: CapCyc
ID: CYTIDINE

unificationXref23752
type: unificationXref
DB: CAS
ID: 65-46-3

unificationXref23751
type: unificationXref
DB: LIGAND
ID: C00475

unificationXref23749
type: unificationXref
DB: CapCyc
ID: CYTIDEAM2-RXN

unificationXref23773
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-312

catalysis23767
type: catalysis
CONTROLLED: biochemicalReaction23748
CONTROLLER: phys-ent-participant23771
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23768

unificationXref23768
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-509

catalysis23762
type: catalysis
CONTROLLED: biochemicalReaction23748
CONTROLLER: phys-ent-participant23766
NAME: CYTIDINE DEAMINASE
XREF: unificationXref23763

unificationXref23763
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-686

catalysis23690
type: catalysis
CONTROLLED: biochemicalReaction23676
CONTROLLER: phys-ent-participant23694
NAME: DUTP PYROPHOSPHATASE
XREF: unificationXref23691

biochemicalReaction23676
type: biochemicalReaction
EC-NUMBER: 3.6.1.23
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant23683
NAME: dUTP pyrophosphatase
RIGHT: phys-ent-participant21108
RIGHT: phys-ent-participant23689
SYNONYMS: Desoxyuridine 5'-triphosphatase
SYNONYMS: Desoxyuridine 5'-triphosphate nucleotidohydrolase
SYNONYMS: dUTPase
SYNONYMS: Deoxyuridine-triphosphatase
SYNONYMS: dUTP diphosphatase
XREF: unificationXref23677

phys-ent-participant23689
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23684
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23684
type: smallMolecule
MOLECULAR-WEIGHT: 308.184
NAME: dUMP
STRUCTURE: chemicalStructure23688
SYNONYMS: U
SYNONYMS: deoxyurdine-phosphate
SYNONYMS: 2'-deoxyuridine-5-monophosphate
SYNONYMS: deoxyuridine-phosphate
SYNONYMS: 2'-deoxyuridine-5'-phosphate
SYNONYMS: 2'-deoxyuridylic acid
SYNONYMS: 2'-deoxy-5'-uridylic acid
XREF: unificationXref23687
XREF: unificationXref23686
XREF: unificationXref23685

chemicalStructure23688
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="DUMP-atom1" elementType="H" x2="6.2887" y2="-6.9775"/> <atom id="DUMP-atom2" elementType="O" x2="8.6568" y2="-8.286"/> <atom id="DUMP-atom3" elementType="O" x2="6.3186" y2="-4.233"/> <atom id="DUMP-atom4" elementType="O" x2="1.3481" y2="-3.2488"/> <atom id="DUMP-atom5" elementType="O" x2="4.5912" y2="0.0"/> <atom id="DUMP-atom6" elementType="O" x2="1.3441" y2="-0.5556"/> <atom id="DUMP-atom7" elementType="O" x2="0.0" y2="-1.9023"/> <atom id="DUMP-atom8" elementType="C" x2="9.8417" y2="-6.2659"/> <atom id="DUMP-atom9" elementType="C" x2="9.8417" y2="-4.9043"/> <atom id="DUMP-atom10" elementType="C" x2="3.6988" y2="-2.7962"/> <atom id="DUMP-atom11" elementType="C" x2="6.7405" y2="-1.0866"/> <atom id="DUMP-atom12" elementType="O" x2="2.6947" y2="-1.8993"/> <atom id="DUMP-atom13" elementType="O" x2="6.0599" y2="-3.159"/> <atom id="DUMP-atom14" elementType="C" x2="8.6604" y2="-6.9393"/> <atom id="DUMP-atom15" elementType="C" x2="7.4943" y2="-4.9043"/> <atom id="DUMP-atom16" elementType="C" x2="5.3866" y2="-1.0866"/> <atom id="DUMP-atom17" elementType="C" x2="4.9779" y2="-2.375"/> <atom id="DUMP-atom18" elementType="C" x2="7.1568" y2="-2.375"/> <atom id="DUMP-atom19" elementType="N" x2="7.4943" y2="-6.2659"/> <atom id="DUMP-atom20" elementType="N" x2="8.6604" y2="-4.2162"/> <atom id="DUMP-atom21" elementType="P" x2="1.3466" y2="-1.9023"/> <bond id="DUMP-bond1" atomRefs="DUMP-atom18 DUMP-atom20" order="1"/> <bond id="DUMP-bond2" atomRefs="DUMP-atom16 DUMP-atom17" order="1"/> <bond id="DUMP-bond3" atomRefs="DUMP-atom15 DUMP-atom20" order="A"/> <bond id="DUMP-bond4" atomRefs="DUMP-atom19 DUMP-atom15" order="A"/> <bond id="DUMP-bond5" atomRefs="DUMP-atom14 DUMP-atom19" order="A"/> <bond id="DUMP-bond6" atomRefs="DUMP-atom13 DUMP-atom18" order="1"/> <bond id="DUMP-bond7" atomRefs="DUMP-atom13 DUMP-atom17" order="1"/> <bond id="DUMP-bond8" atomRefs="DUMP-atom12 DUMP-atom21" order="1"/> <bond id="DUMP-bond9" atomRefs="DUMP-atom11 DUMP-atom18" order="1"/> <bond id="DUMP…

unificationXref23687
type: unificationXref
DB: CapCyc
ID: DUMP

unificationXref23686
type: unificationXref
DB: CAS
ID: 964-26-1

unificationXref23685
type: unificationXref
DB: LIGAND
ID: C00365

unificationXref23677
type: unificationXref
DB: CapCyc
ID: DUTP-PYROP-RXN

phys-ent-participant23694
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23692
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23692
type: protein
NAME: DUTP PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23693

unificationXref23693
type: unificationXref
DB: CapCyc
ID: SGNU204510-MONOMER

unificationXref23691
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-691

catalysis23659
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23663
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23660

biochemicalReaction23626
type: biochemicalReaction
DELTA-G: -5
EC-NUMBER: 3.6.1.1
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant21108
NAME: Inorganic pyrophosphatase
RIGHT: phys-ent-participant23628
SYNONYMS: Diphosphate phosphohydrolase
SYNONYMS: Pyrophosphate phosphohydrolase
SYNONYMS: Inorganic diphosphatase
XREF: unificationXref23627

phys-ent-participant23628
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule20965
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref23627
type: unificationXref
DB: CapCyc
ID: INORGPYROPHOSPHAT-RXN

phys-ent-participant23663
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23661
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23661
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23662

unificationXref23662
type: unificationXref
DB: CapCyc
ID: SGNU196402-MONOMER

unificationXref23660
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-58

catalysis23654
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23658
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23655

phys-ent-participant23658
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23656
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23656
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23657

unificationXref23657
type: unificationXref
DB: CapCyc
ID: SGNU196403-MONOMER

unificationXref23655
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-59

catalysis23649
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23653
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23650

phys-ent-participant23653
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23651
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23651
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23652

unificationXref23652
type: unificationXref
DB: CapCyc
ID: SGNU196566-MONOMER

unificationXref23650
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-70

catalysis23644
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23648
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23645

phys-ent-participant23648
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23646
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23646
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23647

unificationXref23647
type: unificationXref
DB: CapCyc
ID: SGNU197098-MONOMER

unificationXref23645
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-140

catalysis23639
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23643
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23640

phys-ent-participant23643
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23641
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23641
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23642

unificationXref23642
type: unificationXref
DB: CapCyc
ID: SGNU197931-MONOMER

unificationXref23640
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-239

catalysis23634
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23638
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23635

phys-ent-participant23638
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23636
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23636
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23637

unificationXref23637
type: unificationXref
DB: CapCyc
ID: SGNU198623-MONOMER

unificationXref23635
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-310

catalysis23629
type: catalysis
CONTROLLED: biochemicalReaction23626
CONTROLLER: phys-ent-participant23633
NAME: INORGANIC PYROPHOSPHATASE
XREF: unificationXref23630

phys-ent-participant23633
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23631
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23631
type: protein
NAME: INORGANIC PYROPHOSPHATASE
ORGANISM: bioSource20982
XREF: unificationXref23632

unificationXref23632
type: unificationXref
DB: CapCyc
ID: SGNU202333-MONOMER

unificationXref23630
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-560

catalysis23590
type: catalysis
CONTROLLED: biochemicalReaction23583
CONTROLLER: phys-ent-participant23594
NAME: FUMARYLACETOACETATE HYDROLASE
XREF: unificationXref23591

biochemicalReaction23583
type: biochemicalReaction
EC-NUMBER: 3.7.1.2
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant22177
NAME: Fumarylacetoacetase
RIGHT: phys-ent-participant22464
RIGHT: phys-ent-participant23114
SYNONYMS: Fumarylacetoacetate hydrolase
SYNONYMS: β-diketonase
XREF: unificationXref23584

phys-ent-participant22177
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22174
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22174
type: smallMolecule
MOLECULAR-WEIGHT: 200.148
NAME: 4-fumaryl-acetoacetate
STRUCTURE: chemicalStructure22176
XREF: unificationXref22175

chemicalStructure22176
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-FUMARYL-ACETOACETATE-atom1" elementType="O" x2="-0.7585" y2="-1.0"/> <atom id="4-FUMARYL-ACETOACETATE-atom2" elementType="O" x2="0.7551" y2="-0.9898"/> <atom id="4-FUMARYL-ACETOACETATE-atom3" elementType="O" x2="0.9966" y2="-0.7483"/> <atom id="4-FUMARYL-ACETOACETATE-atom4" elementType="C" x2="-0.7585" y2="-0.7585"/> <atom id="4-FUMARYL-ACETOACETATE-atom5" elementType="C" x2="0.34354" y2="-0.7585"/> <atom id="4-FUMARYL-ACETOACETATE-atom6" elementType="C" x2="0.54762" y2="-0.64286"/> <atom id="4-FUMARYL-ACETOACETATE-atom7" elementType="C" x2="-0.26871" y2="-0.64286"/> <atom id="4-FUMARYL-ACETOACETATE-atom8" elementType="O" x2="-0.06463" y2="-1.0"/> <atom id="4-FUMARYL-ACETOACETATE-atom9" elementType="C" x2="-0.47279" y2="-0.7585"/> <atom id="4-FUMARYL-ACETOACETATE-atom10" elementType="C" x2="0.13946" y2="-0.64286"/> <atom id="4-FUMARYL-ACETOACETATE-atom11" elementType="C" x2="-0.06463" y2="-0.7585"/> <atom id="4-FUMARYL-ACETOACETATE-atom12" elementType="O" x2="-1.0" y2="-0.7585"/> <atom id="4-FUMARYL-ACETOACETATE-atom13" elementType="O" x2="0.34354" y2="-1.0"/> <atom id="4-FUMARYL-ACETOACETATE-atom14" elementType="C" x2="0.7551" y2="-0.7483"/> <bond id="4-FUMARYL-ACETOACETATE-bond1" atomRefs="4-FUMARYL-ACETOACETATE-atom14 4-FUMARYL-ACETOACETATE-atom6" order="1"/> <bond id="4-FUMARYL-ACETOACETATE-bond2" atomRefs="4-FUMARYL-ACETOACETATE-atom13 4-FUMARYL-ACETOACETATE-atom5" order="2"/> <bond id="4-FUMARYL-ACETOACETATE-bond3" atomRefs="4-FUMARYL-ACETOACETATE-atom12 4-FUMARYL-ACETOACETATE-atom4" order="1"/> <bond id="4-FUMARYL-ACETOACETATE-bond4" atomRefs="4-FUMARYL-ACETOACETATE-atom11 4-FUMARYL-ACETOACETATE-atom7" order="1"/> <bond id="4-FUMARYL-ACETOACETATE-bond5" atomRefs="4-FUMARYL-ACETOACETATE-atom10 4-FUMARYL-ACETOACETATE-atom11" order="1"/> <bond id="4-FUMARYL-ACETOACETATE-bond6" atomRefs="4-FUMARYL-ACETOACETATE-atom9 4-FUMARYL-ACETOACETATE-atom4" order="1"/> <bond id="4-FUMARYL-ACETOACETATE-bond7" atomRefs="4-FUMARYL-ACETOACETATE-atom8 4-FUMARYL-ACETOA…

unificationXref22175
type: unificationXref
DB: CapCyc
ID: 4-FUMARYL-ACETOACETATE

phys-ent-participant22464
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22459
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22459
type: smallMolecule
MOLECULAR-WEIGHT: 116.073
NAME: fumarate
STRUCTURE: chemicalStructure22463
SYNONYMS: fum
SYNONYMS: fumaric acid
XREF: unificationXref22462
XREF: unificationXref22461
XREF: unificationXref22460

chemicalStructure22463
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="FUM-atom1" elementType="O" x2="-0.86689" y2="-0.02496"/> <atom id="FUM-atom2" elementType="C" x2="-0.68053" y2="-0.54742"/> <atom id="FUM-atom3" elementType="O" x2="0.99667" y2="0.40765"/> <atom id="FUM-atom4" elementType="C" x2="-0.12146" y2="-0.54742"/> <atom id="FUM-atom5" elementType="C" x2="0.71048" y2="-0.06822"/> <atom id="FUM-atom6" elementType="O" x2="0.99667" y2="-0.54409"/> <atom id="FUM-atom7" elementType="C" x2="0.15141" y2="-0.06822"/> <atom id="FUM-atom8" elementType="O" x2="-1.0" y2="-1.0"/> <bond id="FUM-bond1" atomRefs="FUM-atom8 FUM-atom2" order="2"/> <bond id="FUM-bond2" atomRefs="FUM-atom7 FUM-atom4" order="2"/> <bond id="FUM-bond3" atomRefs="FUM-atom6 FUM-atom5" order="1"/> <bond id="FUM-bond4" atomRefs="FUM-atom5 FUM-atom7" order="1"/> <bond id="FUM-bond5" atomRefs="FUM-atom4 FUM-atom2" order="1"/> <bond id="FUM-bond6" atomRefs="FUM-atom3 FUM-atom5" order="2"/> <bond id="FUM-bond7" atomRefs="FUM-atom1 FUM-atom2" order="1"/> <formula concise="C 4 H 4 O 4" formalCharge="0"/> 116.073 C(O)(=O)C=CC(O)=O

unificationXref22462
type: unificationXref
DB: CapCyc
ID: FUM

unificationXref22461
type: unificationXref
DB: CAS
ID: 110-17-8

unificationXref22460
type: unificationXref
DB: LIGAND
ID: C00122

phys-ent-participant23114
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23109
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23109
type: smallMolecule
MOLECULAR-WEIGHT: 102.09
NAME: acetoacetate
STRUCTURE: chemicalStructure23113
SYNONYMS: 3-ketobutyrate
SYNONYMS: 3-oxobutanate
SYNONYMS: oxobutyrate
SYNONYMS: acetoacetic acid
SYNONYMS: 3-oxobutyric acid
SYNONYMS: 3-oxobutanoic acid
SYNONYMS: diacetic acid
SYNONYMS: β-ketobutyric acid
XREF: unificationXref23112
XREF: unificationXref23111
XREF: unificationXref23110

chemicalStructure23113
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="3-KETOBUTYRATE-atom1" elementType="C" x2="-0.0066" y2="-0.42904"/> <atom id="3-KETOBUTYRATE-atom2" elementType="O" x2="-0.0099" y2="0.70297"/> <atom id="3-KETOBUTYRATE-atom3" elementType="O" x2="-1.0" y2="0.12871"/> <atom id="3-KETOBUTYRATE-atom4" elementType="C" x2="-0.33993" y2="0.12871"/> <atom id="3-KETOBUTYRATE-atom5" elementType="C" x2="0.9901" y2="0.14191"/> <atom id="3-KETOBUTYRATE-atom6" elementType="C" x2="0.66007" y2="-0.42904"/> <atom id="3-KETOBUTYRATE-atom7" elementType="O" x2="0.9967" y2="-1.0"/> <bond id="3-KETOBUTYRATE-bond1" atomRefs="3-KETOBUTYRATE-atom7 3-KETOBUTYRATE-atom6" order="2"/> <bond id="3-KETOBUTYRATE-bond2" atomRefs="3-KETOBUTYRATE-atom6 3-KETOBUTYRATE-atom1" order="1"/> <bond id="3-KETOBUTYRATE-bond3" atomRefs="3-KETOBUTYRATE-atom5 3-KETOBUTYRATE-atom6" order="1"/> <bond id="3-KETOBUTYRATE-bond4" atomRefs="3-KETOBUTYRATE-atom4 3-KETOBUTYRATE-atom1" order="1"/> <bond id="3-KETOBUTYRATE-bond5" atomRefs="3-KETOBUTYRATE-atom3 3-KETOBUTYRATE-atom4" order="2"/> <bond id="3-KETOBUTYRATE-bond6" atomRefs="3-KETOBUTYRATE-atom2 3-KETOBUTYRATE-atom4" order="1"/> <formula concise="C 4 H 6 O 3" formalCharge="0"/> 102.09 C(O)(=O)CC(=O)C

unificationXref23112
type: unificationXref
DB: CapCyc
ID: 3-KETOBUTYRATE

unificationXref23111
type: unificationXref
DB: CAS
ID: 541-50-4

unificationXref23110
type: unificationXref
DB: LIGAND
ID: C00164

unificationXref23584
type: unificationXref
DB: CapCyc
ID: FUMARYLACETOACETASE-RXN

phys-ent-participant23594
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23592
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23592
type: protein
NAME: FUMARYLACETOACETATE HYDROLASE
ORGANISM: bioSource20982
XREF: unificationXref23593

unificationXref23593
type: unificationXref
DB: CapCyc
ID: SGNU197573-MONOMER

unificationXref23591
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-199

catalysis23585
type: catalysis
CONTROLLED: biochemicalReaction23583
CONTROLLER: phys-ent-participant23589
NAME: FUMARYLACETOACETATE HYDROLASE
XREF: unificationXref23586

phys-ent-participant23589
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23587
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23587
type: protein
NAME: FUMARYLACETOACETATE HYDROLASE
ORGANISM: bioSource20982
XREF: unificationXref23588

unificationXref23588
type: unificationXref
DB: CapCyc
ID: SGNU199617-MONOMER

unificationXref23586
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-360

catalysis23510
type: catalysis
CONTROLLED: biochemicalReaction23506
CONTROLLER: phys-ent-participant23358
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23511

biochemicalReaction23506
type: biochemicalReaction
EC-NUMBER: 4.1.1.-
LEFT: phys-ent-participant23336
LEFT: phys-ent-participant23342
NAME: CBBLSSYN-RXN
RIGHT: phys-ent-participant21917
RIGHT: phys-ent-participant23347
XREF: unificationXref23507

phys-ent-participant23347
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23343
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23343
type: smallMolecule
MOLECULAR-WEIGHT: 156.032
NAME: 2-phosphoglycolate
STRUCTURE: chemicalStructure23346
SYNONYMS: 2-p-glycolate
SYNONYMS: phosphoglycolate
SYNONYMS: Phosphoglycolic acid
XREF: unificationXref23345
XREF: unificationXref23344

chemicalStructure23346
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-67-atom1" elementType="C" x2="5.7" y2="-1.25"/> <atom id="CPD-67-atom2" elementType="P" x2="7.0977" y2="-1.6376"/> <atom id="CPD-67-atom3" elementType="O" x2="7.0887" y2="-2.3709"/> <atom id="CPD-67-atom4" elementType="O" x2="7.8767" y2="-1.6513"/> <atom id="CPD-67-atom5" elementType="O" x2="7.1108" y2="-0.9002"/> <atom id="CPD-67-atom6" elementType="O" x2="6.3477" y2="-1.6285"/> <atom id="CPD-67-atom7" elementType="C" x2="5.7039" y2="-0.5"/> <atom id="CPD-67-atom8" elementType="O" x2="6.3565" y2="-0.1306"/> <atom id="CPD-67-atom9" elementType="O" x2="5.055" y2="-0.1237"/> <bond id="CPD-67-bond1" atomRefs="CPD-67-atom1 CPD-67-atom7" order="1"/> <bond id="CPD-67-bond2" atomRefs="CPD-67-atom7 CPD-67-atom9" order="2"/> <bond id="CPD-67-bond3" atomRefs="CPD-67-atom7 CPD-67-atom8" order="1"/> <bond id="CPD-67-bond4" atomRefs="CPD-67-atom2 CPD-67-atom6" order="1"/> <bond id="CPD-67-bond5" atomRefs="CPD-67-atom2 CPD-67-atom5" order="1"/> <bond id="CPD-67-bond6" atomRefs="CPD-67-atom2 CPD-67-atom4" order="2"/> <bond id="CPD-67-bond7" atomRefs="CPD-67-atom2 CPD-67-atom3" order="1"/> <bond id="CPD-67-bond8" atomRefs="CPD-67-atom1 CPD-67-atom6" order="1"/> <formula concise="C 2 H 5 O 6 P 1" formalCharge="0"/> 156.032 C(C(=O)O)OP(=O)(O)O

unificationXref23345
type: unificationXref
DB: CapCyc
ID: CPD-67

unificationXref23344
type: unificationXref
DB: LIGAND
ID: C00988

unificationXref23507
type: unificationXref
DB: CapCyc
ID: CBBLSSYN-RXN

phys-ent-participant23358
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23356
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23356
type: protein
NAME: ribulose bisphosphate carboxylase/oxygenase
ORGANISM: bioSource20982
XREF: unificationXref23357

unificationXref23357
type: unificationXref
DB: CapCyc
ID: SGNU196104-MONOMER

unificationXref23511
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-0

catalysis23508
type: catalysis
CONTROLLED: biochemicalReaction23506
CONTROLLER: phys-ent-participant23353
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23509

phys-ent-participant23353
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23351
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23351
type: protein
NAME: ribulose bisphosphate carboxylase/oxygenase
ORGANISM: bioSource20982
XREF: unificationXref23352

unificationXref23352
type: unificationXref
DB: CapCyc
ID: SGNU196105-MONOMER

unificationXref23509
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-3

catalysis23501
type: catalysis
CONTROLLED: biochemicalReaction23493
CONTROLLER: phys-ent-participant23505
NAME: DIAMINOPIMELATE DECARBOXYLASE
XREF: unificationXref23502

biochemicalReaction23493
type: biochemicalReaction
EC-NUMBER: 4.1.1.20
LEFT: phys-ent-participant22336
NAME: Diaminopimelate decarboxylase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant23500
SYNONYMS: DAP decarboxylase
XREF: unificationXref23494

phys-ent-participant22336
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22331
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22331
type: smallMolecule
MOLECULAR-WEIGHT: 190.199
NAME: meso-diaminopimelate
STRUCTURE: chemicalStructure22335
SYNONYMS: meso-2,6-diaminopimelate
SYNONYMS: meso-A2pm
SYNONYMS: meso-diaminoheptanedioate
SYNONYMS: meso-2,6-diaminoheptanedioate
SYNONYMS: meso-1-α,ε-diaminopimelate
SYNONYMS: D,L-diaminopimelate
SYNONYMS: D,L-DAP
SYNONYMS: D,L-meso-diaminoheptanedioate
SYNONYMS: M-DAP
XREF: unificationXref22334
XREF: unificationXref22333
XREF: unificationXref22332

chemicalStructure22335
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="MESO-DIAMINOPIMELATE-atom1" elementType="C" x2="1.9602" y2="4.2813"/> <atom id="MESO-DIAMINOPIMELATE-atom2" elementType="C" x2="2.6747" y2="3.8688"/> <atom id="MESO-DIAMINOPIMELATE-atom3" elementType="C" x2="3.3891" y2="4.2813"/> <atom id="MESO-DIAMINOPIMELATE-atom4" elementType="C" x2="0.5313" y2="4.2813"/> <atom id="MESO-DIAMINOPIMELATE-atom5" elementType="O" x2="-0.1832" y2="3.8688"/> <atom id="MESO-DIAMINOPIMELATE-atom6" elementType="O" x2="0.3177" y2="5.0781"/> <atom id="MESO-DIAMINOPIMELATE-atom7" elementType="C" x2="1.2457" y2="3.8688"/> <atom id="MESO-DIAMINOPIMELATE-atom8" elementType="C" x2="4.1036" y2="3.8688"/> <atom id="MESO-DIAMINOPIMELATE-atom9" elementType="N" x2="1.2457" y2="3.0438"/> <atom id="MESO-DIAMINOPIMELATE-atom10" elementType="N" x2="4.1036" y2="3.0438"/> <atom id="MESO-DIAMINOPIMELATE-atom11" elementType="C" x2="4.687" y2="4.4521"/> <atom id="MESO-DIAMINOPIMELATE-atom12" elementType="O" x2="4.687" y2="5.2771"/> <atom id="MESO-DIAMINOPIMELATE-atom13" elementType="O" x2="5.4839" y2="4.2386"/> <bond id="MESO-DIAMINOPIMELATE-bond1" atomRefs="MESO-DIAMINOPIMELATE-atom11 MESO-DIAMINOPIMELATE-atom12" order="2"/> <bond id="MESO-DIAMINOPIMELATE-bond2" atomRefs="MESO-DIAMINOPIMELATE-atom11 MESO-DIAMINOPIMELATE-atom13" order="1"/> <bond id="MESO-DIAMINOPIMELATE-bond3" atomRefs="MESO-DIAMINOPIMELATE-atom8 MESO-DIAMINOPIMELATE-atom10" order="1"/> <bond id="MESO-DIAMINOPIMELATE-bond4" atomRefs="MESO-DIAMINOPIMELATE-atom7 MESO-DIAMINOPIMELATE-atom9" order="1"/> <bond id="MESO-DIAMINOPIMELATE-bond5" atomRefs="MESO-DIAMINOPIMELATE-atom4 MESO-DIAMINOPIMELATE-atom5" order="2"/> <bond id="MESO-DIAMINOPIMELATE-bond6" atomRefs="MESO-DIAMINOPIMELATE-atom4 MESO-DIAMINOPIMELATE-atom6" order="1"/> <bond id="MESO-DIAMINOPIMELATE-bond7" atomRefs="MESO-DIAMINOPIMELATE-atom8 MESO-DIAMINOPIMELATE-atom11" order="1"/> <bond id="MESO-DIAMINOPIMELATE-bond8" atomRefs="MESO-DIAMINOPIMELATE-atom3 MESO-DIAMINOPIMELATE-atom8" order="1"/> <bond id="MESO-DIAMINOPIMELATE-…

unificationXref22334
type: unificationXref
DB: CapCyc
ID: MESO-DIAMINOPIMELATE

unificationXref22333
type: unificationXref
DB: CAS
ID: 922-54-3

unificationXref22332
type: unificationXref
DB: LIGAND
ID: C00680

phys-ent-participant23500
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23495
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23495
type: smallMolecule
MOLECULAR-WEIGHT: 146.189
NAME: L-lysine
STRUCTURE: chemicalStructure23499
SYNONYMS: K
SYNONYMS: lysine
SYNONYMS: L-lys
SYNONYMS: lys
SYNONYMS: 2,6-diaminohexanoic acid
SYNONYMS: lysine acid
XREF: unificationXref23498
XREF: unificationXref23497
XREF: unificationXref23496

chemicalStructure23499
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="LYS-atom1" elementType="N" x2="0.0" y2="-1.7494"/> <atom id="LYS-atom2" elementType="N" x2="6.0947" y2="-3.7899"/> <atom id="LYS-atom3" elementType="O" x2="7.0847" y2="0.0"/> <atom id="LYS-atom4" elementType="O" x2="8.4371" y2="-1.7623"/> <atom id="LYS-atom5" elementType="C" x2="1.2449" y2="-2.3899"/> <atom id="LYS-atom6" elementType="C" x2="2.4574" y2="-1.6899"/> <atom id="LYS-atom7" elementType="C" x2="3.6699" y2="-2.3899"/> <atom id="LYS-atom8" elementType="C" x2="4.8822" y2="-1.6899"/> <atom id="LYS-atom9" elementType="C" x2="7.0847" y2="-1.4"/> <atom id="LYS-atom10" elementType="C" x2="6.0947" y2="-2.3899"/> <bond id="LYS-bond1" atomRefs="LYS-atom9 LYS-atom10" order="1"/> <bond id="LYS-bond2" atomRefs="LYS-atom8 LYS-atom10" order="1"/> <bond id="LYS-bond3" atomRefs="LYS-atom7 LYS-atom8" order="1"/> <bond id="LYS-bond4" atomRefs="LYS-atom6 LYS-atom7" order="1"/> <bond id="LYS-bond5" atomRefs="LYS-atom5 LYS-atom6" order="1"/> <bond id="LYS-bond6" atomRefs="LYS-atom4 LYS-atom9" order="1"/> <bond id="LYS-bond7" atomRefs="LYS-atom3 LYS-atom9" order="2"/> <bond id="LYS-bond8" atomRefs="LYS-atom10 LYS-atom2" order="1"/> <bond id="LYS-bond9" atomRefs="LYS-atom1 LYS-atom5" order="1"/> <formula concise="C 6 H 14 N 2 O 2" formalCharge="0"/> 146.189 C(N)CCCC(N)C(O)=O

unificationXref23498
type: unificationXref
DB: CapCyc
ID: LYS

unificationXref23497
type: unificationXref
DB: CAS
ID: 56-87-1

unificationXref23496
type: unificationXref
DB: LIGAND
ID: C00047

unificationXref23494
type: unificationXref
DB: CapCyc
ID: DIAMINOPIMDECARB-RXN

phys-ent-participant23505
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23503
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23503
type: protein
NAME: DIAMINOPIMELATE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23504

unificationXref23504
type: unificationXref
DB: CapCyc
ID: SGNU196122-MONOMER

unificationXref23502
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-10

catalysis23488
type: catalysis
CONTROLLED: biochemicalReaction23476
CONTROLLER: phys-ent-participant23492
NAME: MEVALONATE DIPHOSPHATE DECARBOXYLASE
XREF: unificationXref23489

biochemicalReaction23476
type: biochemicalReaction
EC-NUMBER: 4.1.1.33
LEFT: phys-ent-participant23482
LEFT: phys-ent-participant20931
NAME: Diphosphomevalonate decarboxylase
RIGHT: phys-ent-participant20970
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant22010
RIGHT: phys-ent-participant20977
SYNONYMS: Mevalonate diphosphate decarboxylase
SYNONYMS: Mevalonate pyrophosphate decarboxylase
XREF: unificationXref23477

phys-ent-participant23482
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23478
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23478
type: smallMolecule
MOLECULAR-WEIGHT: 308.118
NAME: mevalonate-5-PP
STRUCTURE: chemicalStructure23481
SYNONYMS: mevalonate-diphosphate
SYNONYMS: (R)-5-Diphosphomevalonate
XREF: unificationXref23480
XREF: unificationXref23479

chemicalStructure23481
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-641-atom1" elementType="C" x2="0.525" y2="2.7084"/> <atom id="CPD-641-atom2" elementType="C" x2="1.1745" y2="2.3334"/> <atom id="CPD-641-atom3" elementType="C" x2="1.1745" y2="1.5834"/> <atom id="CPD-641-atom4" elementType="O" x2="0.3037" y2="1.8208"/> <atom id="CPD-641-atom5" elementType="C" x2="0.525" y2="3.4584"/> <atom id="CPD-641-atom6" elementType="O" x2="-0.1257" y2="3.8312"/> <atom id="CPD-641-atom7" elementType="O" x2="1.1759" y2="3.8313"/> <atom id="CPD-641-atom8" elementType="C" x2="1.8027" y2="2.7431"/> <atom id="CPD-641-atom9" elementType="C" x2="2.4716" y2="2.404"/> <atom id="CPD-641-atom10" elementType="O" x2="3.0998" y2="2.8137"/> <atom id="CPD-641-atom11" elementType="P" x2="3.8458" y2="2.8125"/> <atom id="CPD-641-atom12" elementType="O" x2="3.8452" y2="2.0625"/> <atom id="CPD-641-atom13" elementType="O" x2="3.8424" y2="3.5625"/> <atom id="CPD-641-atom14" elementType="P" x2="5.3292" y2="2.8125"/> <atom id="CPD-641-atom15" elementType="O" x2="6.0792" y2="2.8125"/> <atom id="CPD-641-atom16" elementType="O" x2="5.3286" y2="2.0625"/> <atom id="CPD-641-atom17" elementType="O" x2="5.3258" y2="3.5625"/> <atom id="CPD-641-atom18" elementType="O" x2="4.5792" y2="2.8125"/> <bond id="CPD-641-bond1" atomRefs="CPD-641-atom14 CPD-641-atom17" order="2"/> <bond id="CPD-641-bond2" atomRefs="CPD-641-atom14 CPD-641-atom16" order="1"/> <bond id="CPD-641-bond3" atomRefs="CPD-641-atom14 CPD-641-atom15" order="1"/> <bond id="CPD-641-bond4" atomRefs="CPD-641-atom18 CPD-641-atom14" order="1"/> <bond id="CPD-641-bond5" atomRefs="CPD-641-atom11 CPD-641-atom13" order="2"/> <bond id="CPD-641-bond6" atomRefs="CPD-641-atom11 CPD-641-atom12" order="1"/> <bond id="CPD-641-bond7" atomRefs="CPD-641-atom11 CPD-641-atom18" order="1"/> <bond id="CPD-641-bond8" atomRefs="CPD-641-atom10 CPD-641-atom11" order="1"/> <bond id="CPD-641-bond9" atomRefs="CPD-641-atom9 CPD-641-atom10" order="1"/> <bond id="CPD-641-bond10" atomRefs="CPD-641-atom8 CPD-641-atom9" order="1"/> <bond id=…

unificationXref23480
type: unificationXref
DB: CapCyc
ID: CPD-641

unificationXref23479
type: unificationXref
DB: CAS
ID: 4872-34-8

unificationXref23477
type: unificationXref
DB: CapCyc
ID: DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN

phys-ent-participant23492
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23490
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23490
type: protein
NAME: MEVALONATE DIPHOSPHATE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23491

unificationXref23491
type: unificationXref
DB: CapCyc
ID: SGNU200720-MONOMER

unificationXref23489
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-440

catalysis23483
type: catalysis
CONTROLLED: biochemicalReaction23476
CONTROLLER: phys-ent-participant23487
NAME: DIPHOSPHOMEVALONATE DECARBOXYLASE
XREF: unificationXref23484

phys-ent-participant23487
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23485
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23485
type: protein
NAME: DIPHOSPHOMEVALONATE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23486

unificationXref23486
type: unificationXref
DB: CapCyc
ID: SGNU203099-MONOMER

unificationXref23484
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-594

catalysis23449
type: catalysis
CONTROLLED: biochemicalReaction23440
CONTROLLER: phys-ent-participant23453
NAME: GLUTAMATE DECARBOXYLASE
XREF: unificationXref23450

biochemicalReaction23440
type: biochemicalReaction
EC-NUMBER: 4.1.1.15
LEFT: phys-ent-participant21095
NAME: Glutamate decarboxylase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant23448
XREF: unificationXref23441

phys-ent-participant23448
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23442
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23442
type: smallMolecule
COMMENT: γ-aminobutyrate (GABA) is a four-carbon non-protein amino acid conserved from bacteria to plants and vertebrates. GABA was originally discovered in plants in 1949 |CITS: [Steward49]|, but interest shifted to animals when it was found that GABA occurs at high levels in the brain, as a neurotransmitter. In plants and in animals, GABA is mainly metabolized via a short pathway composed of three enzymes, called the GABA shunt because it bypasses two steps of the |FRAME: TCA|.
MOLECULAR-WEIGHT: 103.121
NAME: 4-aminobutyrate
STRUCTURE: chemicalStructure23447
SYNONYMS: GABA
SYNONYMS: 4-aminobutyric acid
SYNONYMS: 4-aminobutanoate
SYNONYMS: γ-aminobutyrate
SYNONYMS: 4-amino-n-butyric acid
SYNONYMS: γ-amino-n-butyric acid
XREF: unificationXref23446
XREF: unificationXref23445
XREF: unificationXref23444
XREF: publicationXref23443

chemicalStructure23447
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-AMINO-BUTYRATE-atom1" elementType="C" x2="0.59934" y2="-0.53974"/> <atom id="4-AMINO-BUTYRATE-atom2" elementType="C" x2="-0.60265" y2="-0.30795"/> <atom id="4-AMINO-BUTYRATE-atom3" elementType="N" x2="-1.0" y2="-0.53974"/> <atom id="4-AMINO-BUTYRATE-atom4" elementType="O" x2="0.99669" y2="-0.30795"/> <atom id="4-AMINO-BUTYRATE-atom5" elementType="C" x2="-0.2053" y2="-0.53974"/> <atom id="4-AMINO-BUTYRATE-atom6" elementType="O" x2="0.59934" y2="-1.0"/> <atom id="4-AMINO-BUTYRATE-atom7" elementType="C" x2="0.19868" y2="-0.30795"/> <bond id="4-AMINO-BUTYRATE-bond1" atomRefs="4-AMINO-BUTYRATE-atom7 4-AMINO-BUTYRATE-atom1" order="1"/> <bond id="4-AMINO-BUTYRATE-bond2" atomRefs="4-AMINO-BUTYRATE-atom6 4-AMINO-BUTYRATE-atom1" order="1"/> <bond id="4-AMINO-BUTYRATE-bond3" atomRefs="4-AMINO-BUTYRATE-atom5 4-AMINO-BUTYRATE-atom7" order="1"/> <bond id="4-AMINO-BUTYRATE-bond4" atomRefs="4-AMINO-BUTYRATE-atom4 4-AMINO-BUTYRATE-atom1" order="2"/> <bond id="4-AMINO-BUTYRATE-bond5" atomRefs="4-AMINO-BUTYRATE-atom3 4-AMINO-BUTYRATE-atom2" order="1"/> <bond id="4-AMINO-BUTYRATE-bond6" atomRefs="4-AMINO-BUTYRATE-atom2 4-AMINO-BUTYRATE-atom5" order="1"/> <formula concise="C 4 H 9 N 1 O 2" formalCharge="0"/> 103.121 C(=O)(O)CCCN butanoic acid, 4-amino-

unificationXref23446
type: unificationXref
DB: CapCyc
ID: 4-AMINO-BUTYRATE

unificationXref23445
type: unificationXref
DB: CAS
ID: 56-12-2

unificationXref23444
type: unificationXref
DB: LIGAND
ID: C00334

publicationXref23443
type: publicationXref
AUTHORS: Steward, F.C.
AUTHORS: Thosmpson, J.F.
AUTHORS: Dent, C.E.
SOURCE: Science 110 (2861):439-440
TITLE: γ-aminobutyric acid: a constituent of the potato tuber?
YEAR: 1949

unificationXref23441
type: unificationXref
DB: CapCyc
ID: GLUTDECARBOX-RXN

phys-ent-participant23453
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23451
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23451
type: protein
NAME: GLUTAMATE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23452

unificationXref23452
type: unificationXref
DB: CapCyc
ID: SGNU197435-MONOMER

unificationXref23450
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-180

catalysis23435
type: catalysis
CONTROLLED: biochemicalReaction23433
CONTROLLER: phys-ent-participant23439
NAME: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
XREF: unificationXref23436

biochemicalReaction23433
type: biochemicalReaction
EC-NUMBER: 4.1.1.48
LEFT: phys-ent-participant22135
NAME: indole-3-glycerol-phosphate synthase
RIGHT: phys-ent-participant22606
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant20951
SYNONYMS: Indoleglycerol phosphate synthase
SYNONYMS: indole-3-glycerol phosphate synthesis
XREF: unificationXref23434

phys-ent-participant22135
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22131
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22131
type: smallMolecule
MOLECULAR-WEIGHT: 349.233
NAME: 1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate
STRUCTURE: chemicalStructure22134
SYNONYMS: 1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-P
SYNONYMS: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate
SYNONYMS: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-P
XREF: unificationXref22133
XREF: unificationXref22132

chemicalStructure22134
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom1" elementType="C" x2="-1.0" y2="0.57388"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom2" elementType="C" x2="-0.7732" y2="-0.48454"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom3" elementType="O" x2="-0.4811" y2="-0.73883"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom4" elementType="C" x2="-0.76289" y2="0.99656"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom5" elementType="O" x2="-0.04467" y2="0.75601"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom6" elementType="P" x2="-0.21993" y2="-0.73883"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom7" elementType="N" x2="-0.75945" y2="0.2921"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom8" elementType="C" x2="-0.7732" y2="0.08935"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom9" elementType="C" x2="-0.52234" y2="0.60137"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom10" elementType="C" x2="-0.7732" y2="-0.73883"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom11" elementType="O" x2="-0.51203" y2="0.08935"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom12" elementType="O" x2="-0.12715" y2="0.37457"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom13" elementType="C" x2="-0.75945" y2="0.46392"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom14" elementType="C" x2="-1.0" y2="0.8488"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom15" elementType="O" x2="-0.5189" y2="-0.48454"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom16" elementType="C" x2="-0.25773" y2="0.60137"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom17" elementType="C" x2="-0.89347" y2="0.19588"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom18" elementType="O" x2="-0.21993" y2="-0.47766"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom19" elementType="C" x2="-0.7732" y2="-0.20962"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom20" elementType="O" x2="-0.21993" y2="-1.0"/> <atom id="CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P-atom21" elementT…

unificationXref22133
type: unificationXref
DB: CapCyc
ID: CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P

unificationXref22132
type: unificationXref
DB: LIGAND
ID: C01302

phys-ent-participant22606
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22602
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22602
type: smallMolecule
MOLECULAR-WEIGHT: 287.208
NAME: indole-3-glycerol-phosphate
STRUCTURE: chemicalStructure22605
SYNONYMS: C'-(3-Indolyl)-glycerol 3-phosphate
SYNONYMS: indole-3-glycerol-P
SYNONYMS: 1-(indol-3-yl)glycerol-3-P
SYNONYMS: 1-(indol-3-yl)glycerol-3-phosphate
SYNONYMS: indoleglycerol phosphate
XREF: unificationXref22604
XREF: unificationXref22603

chemicalStructure22605
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="INDOLE-3-GLYCEROL-P-atom1" elementType="C" x2="-0.4029851" y2="0.61194026"/> <atom id="INDOLE-3-GLYCEROL-P-atom2" elementType="C" x2="-0.71268654" y2="0.19029844"/> <atom id="INDOLE-3-GLYCEROL-P-atom3" elementType="P" x2="0.08582091" y2="-0.69402987"/> <atom id="INDOLE-3-GLYCEROL-P-atom4" elementType="C" x2="-0.4029851" y2="0.35447752"/> <atom id="INDOLE-3-GLYCEROL-P-atom5" elementType="O" x2="0.67910445" y2="-0.1791045"/> <atom id="INDOLE-3-GLYCEROL-P-atom6" elementType="C" x2="0.08582091" y2="-0.1902985"/> <atom id="INDOLE-3-GLYCEROL-P-atom7" elementType="O" x2="0.6716417" y2="0.3470149"/> <atom id="INDOLE-3-GLYCEROL-P-atom8" elementType="O" x2="0.38805962" y2="-0.69402987"/> <atom id="INDOLE-3-GLYCEROL-P-atom9" elementType="O" x2="0.08582091" y2="-0.47761196"/> <atom id="INDOLE-3-GLYCEROL-P-atom10" elementType="O" x2="-0.22014928" y2="-0.69402987"/> <atom id="INDOLE-3-GLYCEROL-P-atom11" elementType="H" x2="-0.14925373" y2="0.99626863"/> <atom id="INDOLE-3-GLYCEROL-P-atom12" elementType="C" x2="0.093283534" y2="0.61194026"/> <atom id="INDOLE-3-GLYCEROL-P-atom13" elementType="C" x2="-0.71268654" y2="0.7798507"/> <atom id="INDOLE-3-GLYCEROL-P-atom14" elementType="C" x2="0.391791" y2="0.22388053"/> <atom id="INDOLE-3-GLYCEROL-P-atom15" elementType="C" x2="-1.0" y2="0.62313426"/> <atom id="INDOLE-3-GLYCEROL-P-atom16" elementType="C" x2="0.391791" y2="-0.06716418"/> <atom id="INDOLE-3-GLYCEROL-P-atom17" elementType="C" x2="-1.0" y2="0.34328353"/> <atom id="INDOLE-3-GLYCEROL-P-atom18" elementType="N" x2="-0.1529851" y2="0.75373125"/> <atom id="INDOLE-3-GLYCEROL-P-atom19" elementType="C" x2="0.093283534" y2="0.35447752"/> <atom id="INDOLE-3-GLYCEROL-P-atom20" elementType="O" x2="0.08582091" y2="-1.0"/> <bond id="INDOLE-3-GLYCEROL-P-bond1" atomRefs="INDOLE-3-GLYCEROL-P-atom19 INDOLE-3-GLYCEROL-P-atom4" order="A"/> <bond id="INDOLE-3-GLYCEROL-P-bond2" atomRefs="INDOLE-3-GLYCEROL-P-atom18 INDOLE-3-GLYCEROL-P-atom12" order="A"/> <bond id="INDOLE-3-GLYCEROL-P-bond3"…

unificationXref22604
type: unificationXref
DB: CapCyc
ID: INDOLE-3-GLYCEROL-P

unificationXref22603
type: unificationXref
DB: LIGAND
ID: C03506

unificationXref23434
type: unificationXref
DB: CapCyc
ID: IGPSYN-RXN

phys-ent-participant23439
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23437
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23437
type: protein
NAME: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref23438

unificationXref23438
type: unificationXref
DB: CapCyc
ID: SGNU197670-MONOMER

unificationXref23436
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-207

catalysis23413
type: catalysis
CONTROLLED: biochemicalReaction23389
CONTROLLER: phys-ent-participant23417
NAME: UMP-synthase
XREF: unificationXref23414

biochemicalReaction23389
type: biochemicalReaction
EC-NUMBER: 4.1.1.23
LEFT: phys-ent-participant23396
NAME: Orotidine-5'-phosphate decarboxylase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant23402
SYNONYMS: UMP synthase
SYNONYMS: Uridine 5'-monophosphate synthase
SYNONYMS: OMPdcase
SYNONYMS: OMP decarboxylase
SYNONYMS: Orotidylic decarboxylase
XREF: unificationXref23390

phys-ent-participant23396
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23391
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23391
type: smallMolecule
MOLECULAR-WEIGHT: 368.193
NAME: orotidine-5'-phosphate
STRUCTURE: chemicalStructure23395
XREF: unificationXref23394
XREF: unificationXref23393
XREF: unificationXref23392

chemicalStructure23395
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="OROTIDINE-5-PHOSPHATE-atom1" elementType="O" x2="0.36601305" y2="0.748366"/> <atom id="OROTIDINE-5-PHOSPHATE-atom2" elementType="O" x2="0.996732" y2="0.14379084"/> <atom id="OROTIDINE-5-PHOSPHATE-atom3" elementType="O" x2="0.2614379" y2="-1.0"/> <atom id="OROTIDINE-5-PHOSPHATE-atom4" elementType="O" x2="-1.0" y2="-0.43790847"/> <atom id="OROTIDINE-5-PHOSPHATE-atom5" elementType="H" x2="0.2614379" y2="-0.6993464"/> <atom id="OROTIDINE-5-PHOSPHATE-atom6" elementType="C" x2="0.57843137" y2="0.38562095"/> <atom id="OROTIDINE-5-PHOSPHATE-atom7" elementType="C" x2="0.36601305" y2="0.496732"/> <atom id="OROTIDINE-5-PHOSPHATE-atom8" elementType="O" x2="-0.751634" y2="-0.6797385"/> <atom id="OROTIDINE-5-PHOSPHATE-atom9" elementType="H" x2="-0.2647059" y2="-0.745098"/> <atom id="OROTIDINE-5-PHOSPHATE-atom10" elementType="C" x2="0.7843138" y2="0.022875786"/> <atom id="OROTIDINE-5-PHOSPHATE-atom11" elementType="H" x2="-0.14379084" y2="-0.6993464"/> <atom id="OROTIDINE-5-PHOSPHATE-atom12" elementType="C" x2="0.2614379" y2="-0.8496732"/> <atom id="OROTIDINE-5-PHOSPHATE-atom13" elementType="N" x2="0.38235295" y2="0.0"/> <atom id="OROTIDINE-5-PHOSPHATE-atom14" elementType="C" x2="0.16013074" y2="0.14379084"/> <atom id="OROTIDINE-5-PHOSPHATE-atom15" elementType="P" x2="-0.751634" y2="-0.43790847"/> <atom id="OROTIDINE-5-PHOSPHATE-atom16" elementType="C" x2="-0.2647059" y2="-0.43790847"/> <atom id="OROTIDINE-5-PHOSPHATE-atom17" elementType="N" x2="0.16013074" y2="0.37254906"/> <atom id="OROTIDINE-5-PHOSPHATE-atom18" elementType="H" x2="-0.058823526" y2="0.46405232"/> <atom id="OROTIDINE-5-PHOSPHATE-atom19" elementType="O" x2="-0.51960784" y2="-0.43790847"/> <atom id="OROTIDINE-5-PHOSPHATE-atom20" elementType="O" x2="-0.032679737" y2="-0.0065359473"/> <atom id="OROTIDINE-5-PHOSPHATE-atom21" elementType="C" x2="0.57843137" y2="0.14379084"/> <atom id="OROTIDINE-5-PHOSPHATE-atom22" elementType="C" x2="0.38235295" y2="-0.5588235"/> <atom id="OROTIDINE-5-PHOSPHATE-atom23" element…

unificationXref23394
type: unificationXref
DB: CapCyc
ID: OROTIDINE-5-PHOSPHATE

unificationXref23393
type: unificationXref
DB: CAS
ID: 2149-82-8

unificationXref23392
type: unificationXref
DB: LIGAND
ID: C01103

unificationXref23390
type: unificationXref
DB: CapCyc
ID: OROTPDECARB-RXN

phys-ent-participant23417
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23415
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23415
type: protein
NAME: UMP-synthase
ORGANISM: bioSource20982
XREF: unificationXref23416

unificationXref23416
type: unificationXref
DB: CapCyc
ID: SGNU196147-MONOMER

unificationXref23414
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-11

catalysis23408
type: catalysis
CONTROLLED: biochemicalReaction23389
CONTROLLER: phys-ent-participant23412
NAME: UMP-synthase
XREF: unificationXref23409

phys-ent-participant23412
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23410
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23410
type: protein
NAME: UMP-synthase
ORGANISM: bioSource20982
XREF: unificationXref23411

unificationXref23411
type: unificationXref
DB: CapCyc
ID: SGNU197543-MONOMER

unificationXref23409
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-193

catalysis23403
type: catalysis
CONTROLLED: biochemicalReaction23389
CONTROLLER: phys-ent-participant23407
NAME: UMP-synthase
XREF: unificationXref23404

phys-ent-participant23407
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23405
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23405
type: protein
NAME: UMP-synthase
ORGANISM: bioSource20982
XREF: unificationXref23406

unificationXref23406
type: unificationXref
DB: CapCyc
ID: SGNU201614-MONOMER

unificationXref23404
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-513

catalysis23380
type: catalysis
CONTROLLED: biochemicalReaction23368
CONTROLLER: phys-ent-participant23384
NAME: PHOSPHATIDYLSERINE DECARBOXYLASE
XREF: unificationXref23381

biochemicalReaction23368
type: biochemicalReaction
EC-NUMBER: 4.1.1.65
LEFT: phys-ent-participant23374
NAME: Phosphatidylserine decarboxylase
RIGHT: phys-ent-participant23379
RIGHT: phys-ent-participant21166
SYNONYMS: PS decarboxylase
XREF: unificationXref23369

phys-ent-participant23374
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23370
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23370
type: smallMolecule
NAME: an L-1-phosphatidylserine
STRUCTURE: chemicalStructure23373
SYNONYMS: phosphatidylserine (Ecoli)
SYNONYMS: O-sn-phosphatidyl-L-serine
SYNONYMS: phosphatidyl-serine
SYNONYMS: 3-O-sn-phosphatidyl-L-serine
SYNONYMS: phosphatidyl-L-serine
SYNONYMS: 1-phosphatidyl-serine
XREF: unificationXref23372
XREF: unificationXref23371

chemicalStructure23373
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="L-1-PHOSPHATIDYL-SERINE" title="an L-1-phosphatidylserine" dictRef="dictL-1-PHOSPHATIDYL-SERINE"> <atomArray> <atom id="L-1-PHOSPHATIDYL-SERINE-atom1" elementType="O" x2="-1.0" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom2" elementType="O" x2="0.0313" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom3" elementType="O" x2="-0.1631" y2="-0.54201"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom4" elementType="C" x2="0.51236" y2="-0.81549"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom5" elementType="O" x2="-0.84185" y2="-0.44646"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom6" elementType="P" x2="-0.1631" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom7" elementType="C" x2="-0.53871" y2="-0.63097"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom8" elementType="C" x2="-0.69357" y2="-0.72323"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom9" elementType="C" x2="0.47282" y2="-0.46952"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom10" elementType="O" x2="0.3542" y2="-0.56178"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom11" elementType="O" x2="0.6771" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom12" elementType="O" x2="-0.1631" y2="-0.91104"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom13" elementType="O" x2="-0.33443" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom14" elementType="R" x2="0.99671" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom15" elementType="C" x2="0.83526" y2="-0.81549"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom16" elementType="O" x2="0.83526" y2="-1.0"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom17" elementType="O" x2="0.65733" y2="-0.46952"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom18" elementType="C" x2="-0.84185" y2="-0.63097"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom19" elementType="C" x2="0.3542" y2="-0.72652"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom20" elementType="R" x2="0.32125" y2="-0.36738"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom21" elementType="C" x2="0.19275" y2="-0.81549"/> <atom id="L-1-PHOSPHATIDYL-SERINE-atom22" elementType="N" …

unificationXref23372
type: unificationXref
DB: CapCyc
ID: L-1-PHOSPHATIDYL-SERINE

unificationXref23371
type: unificationXref
DB: LIGAND
ID: C02737

phys-ent-participant23379
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23375
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23375
type: smallMolecule
NAME: an L-1-phosphatidyl-ethanolamine
STRUCTURE: chemicalStructure23378
SYNONYMS: Phosphatidylethanolamine (ecoli)
SYNONYMS: O-(1-β-acyl-2-acyl-sn-glycero-3-phospho)-ethanolamine
SYNONYMS: PtdEtn
SYNONYMS: phosphatidylethanolamine
SYNONYMS: 1-phosphatidylethanolamine
SYNONYMS: L-1-phosphotidylethanolamine
XREF: unificationXref23377
XREF: unificationXref23376

chemicalStructure23378
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <cml> <molecule id="L-1-PHOSPHATIDYL-ETHANOLAMINE" title="an L-1-phosphatidyl-ethanolamine" dictRef="dictL-1-PHOSPHATIDYL-ETHANOLAMINE"> <atomArray> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom1" elementType="O" x2="0.79743" y2="-1.0"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom2" elementType="O" x2="0.62379" y2="-0.62058"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom3" elementType="O" x2="-0.23473" y2="-0.86817"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom4" elementType="P" x2="-0.23473" y2="-0.61415"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom5" elementType="O" x2="0.32476" y2="-0.07395"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom6" elementType="O" x2="0.03215" y2="-0.61415"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom7" elementType="C" x2="0.09968" y2="0.05466"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom8" elementType="C" x2="0.03215" y2="-0.34084"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom9" elementType="R" x2="-0.12862" y2="-0.06109"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom10" elementType="C" x2="-0.63666" y2="-0.45981"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom11" elementType="O" x2="0.09968" y2="0.30868"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom12" elementType="C" x2="-0.81672" y2="-0.63987"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom13" elementType="C" x2="0.79743" y2="-0.74598"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom14" elementType="C" x2="0.32476" y2="-0.34084"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom15" elementType="O" x2="-0.4791" y2="-0.61415"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom16" elementType="O" x2="-0.23473" y2="-0.36013"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom17" elementType="C" x2="0.62379" y2="-0.34084"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom18" elementType="N" x2="-1.0" y2="-0.46624"/> <atom id="L-1-PHOSPHATIDYL-ETHANOLAMINE-atom19" elementType="R" x2="0.99678" y2="-0.59164"/> </atomArray> <bondArray> <bond id="L-1-PHOSPHATIDYL-ETHANOLAMINE-bond1" atomRefs="L-1-PHOSPHATID…

unificationXref23377
type: unificationXref
DB: CapCyc
ID: L-1-PHOSPHATIDYL-ETHANOLAMINE

unificationXref23376
type: unificationXref
DB: LIGAND
ID: C00350

unificationXref23369
type: unificationXref
DB: CapCyc
ID: PHOSPHASERDECARB-RXN

phys-ent-participant23384
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23382
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23382
type: protein
NAME: PHOSPHATIDYLSERINE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23383

unificationXref23383
type: unificationXref
DB: CapCyc
ID: SGNU199421-MONOMER

unificationXref23381
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-346

catalysis23366
type: catalysis
CONTROLLED: biochemicalReaction23361
CONTROLLER: phys-ent-participant23358
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23367

biochemicalReaction23361
type: biochemicalReaction
EC-NUMBER: 4.1.1.39
LEFT: phys-ent-participant20951
LEFT: phys-ent-participant21166
LEFT: phys-ent-participant23336
NAME: Ribulose-bisphosphate carboxylase
RIGHT: phys-ent-participant23363
SYNONYMS: Ribulose 1,5-bisphosphate carboxylase
SYNONYMS: Ribulose 1,5-diphosphate carboxylase
SYNONYMS: Diphosphoribulose carboxylase
SYNONYMS: Rubisco
SYNONYMS: Ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23362

phys-ent-participant23363
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21912
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 2

unificationXref23362
type: unificationXref
DB: CapCyc
ID: RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN

unificationXref23367
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-1

catalysis23364
type: catalysis
CONTROLLED: biochemicalReaction23361
CONTROLLER: phys-ent-participant23353
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23365

unificationXref23365
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-4

catalysis23354
type: catalysis
CONTROLLED: biochemicalReaction23330
CONTROLLER: phys-ent-participant23358
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23355

biochemicalReaction23330
type: biochemicalReaction
EC-NUMBER: 4.1.1.-
LEFT: phys-ent-participant23336
LEFT: phys-ent-participant23342
NAME: RXN-961
RIGHT: phys-ent-participant23347
RIGHT: phys-ent-participant21917
RIGHT: phys-ent-participant23348
XREF: unificationXref23331

unificationXref23331
type: unificationXref
DB: CapCyc
ID: RXN-961

unificationXref23355
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-2

catalysis23349
type: catalysis
CONTROLLED: biochemicalReaction23330
CONTROLLER: phys-ent-participant23353
NAME: ribulose bisphosphate carboxylase/oxygenase
XREF: unificationXref23350

unificationXref23350
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-5

catalysis23325
type: catalysis
CONTROLLED: biochemicalReaction23312
CONTROLLER: phys-ent-participant23329
NAME: S-ADENOSYL-L-METHIONINE DECARBOXYLASE
XREF: unificationXref23326

biochemicalReaction23312
type: biochemicalReaction
EC-NUMBER: 4.1.1.50
LEFT: phys-ent-participant23319
NAME: Adenosylmethionine decarboxylase
RIGHT: phys-ent-participant21166
RIGHT: phys-ent-participant23324
SYNONYMS: S-adenosyl-L-methionine decarboxylase
XREF: unificationXref23313

unificationXref23313
type: unificationXref
DB: CapCyc
ID: SAMDECARB-RXN

phys-ent-participant23329
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23327
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23327
type: protein
NAME: S-ADENOSYL-L-METHIONINE DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23328

unificationXref23328
type: unificationXref
DB: CapCyc
ID: SGNU198098-MONOMER

unificationXref23326
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-260

catalysis23294
type: catalysis
CONTROLLED: biochemicalReaction23285
CONTROLLER: phys-ent-participant23298
NAME: UROPORPHYRINOGEN DECARBOXYLASE
XREF: unificationXref23295

biochemicalReaction23285
type: biochemicalReaction
EC-NUMBER: 4.1.1.37
LEFT: phys-ent-participant22599
NAME: Uroporphyrinogen decarboxylase
RIGHT: phys-ent-participant23287
RIGHT: phys-ent-participant23293
SYNONYMS: Uroporphyrinogen III decarboxylase
XREF: unificationXref23286

phys-ent-participant22599
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22594
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22594
type: smallMolecule
MOLECULAR-WEIGHT: 836.805
NAME: uroporphyrinogen-III
STRUCTURE: chemicalStructure22598
XREF: unificationXref22597
XREF: unificationXref22596
XREF: unificationXref22595

chemicalStructure22598
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="UROPORPHYRINOGEN-III-atom1" elementType="C" x2="1.7047" y2="-0.0239"/> <atom id="UROPORPHYRINOGEN-III-atom2" elementType="C" x2="0.8399" y2="0.9929"/> <atom id="UROPORPHYRINOGEN-III-atom3" elementType="C" x2="1.6028" y2="1.307"/> <atom id="UROPORPHYRINOGEN-III-atom4" elementType="C" x2="2.1372" y2="0.6786"/> <atom id="UROPORPHYRINOGEN-III-atom5" elementType="C" x2="-1.903" y2="0.7977"/> <atom id="UROPORPHYRINOGEN-III-atom6" elementType="C" x2="-1.3324" y2="1.3935"/> <atom id="UROPORPHYRINOGEN-III-atom7" elementType="C" x2="-0.5894" y2="1.035"/> <atom id="UROPORPHYRINOGEN-III-atom8" elementType="C" x2="-1.5126" y2="0.0709"/> <atom id="UROPORPHYRINOGEN-III-atom9" elementType="C" x2="0.1374" y2="1.4254"/> <atom id="UROPORPHYRINOGEN-III-atom10" elementType="C" x2="-1.5462" y2="-1.4915"/> <atom id="UROPORPHYRINOGEN-III-atom11" elementType="C" x2="-0.6655" y2="-2.4945"/> <atom id="UROPORPHYRINOGEN-III-atom12" elementType="C" x2="-1.4233" y2="-2.8206"/> <atom id="UROPORPHYRINOGEN-III-atom13" elementType="C" x2="-1.9676" y2="-2.2008"/> <atom id="UROPORPHYRINOGEN-III-atom14" elementType="C" x2="2.074" y2="-2.2559"/> <atom id="UROPORPHYRINOGEN-III-atom15" elementType="C" x2="1.5129" y2="-2.8607"/> <atom id="UROPORPHYRINOGEN-III-atom16" elementType="C" x2="0.7643" y2="-2.514"/> <atom id="UROPORPHYRINOGEN-III-atom17" elementType="C" x2="1.6721" y2="-1.5354"/> <atom id="UROPORPHYRINOGEN-III-atom18" elementType="C" x2="0.0438" y2="-2.9159"/> <atom id="UROPORPHYRINOGEN-III-atom19" elementType="C" x2="2.0188" y2="-0.7868"/> <atom id="UROPORPHYRINOGEN-III-atom20" elementType="C" x2="-1.8711" y2="-0.6722"/> <atom id="UROPORPHYRINOGEN-III-atom21" elementType="C" x2="2.8931" y2="-2.3543"/> <atom id="UROPORPHYRINOGEN-III-atom22" elementType="C" x2="-1.6048" y2="-3.6254"/> <atom id="UROPORPHYRINOGEN-III-atom23" elementType="C" x2="-1.4791" y2="2.2054"/> <atom id="UROPORPHYRINOGEN-III-atom24" elementType="C" x2="-2.2555" y2="2.4843"/> <atom id="UROPORPHYRINOGEN-III-atom25" eleme…

unificationXref22597
type: unificationXref
DB: CapCyc
ID: UROPORPHYRINOGEN-III

unificationXref22596
type: unificationXref
DB: CAS
ID: 1976-85-8

unificationXref22595
type: unificationXref
DB: LIGAND
ID: C01051

phys-ent-participant23287
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21158
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 4

phys-ent-participant23293
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23288
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23288
type: smallMolecule
MOLECULAR-WEIGHT: 660.766
NAME: coproporphyrinogen III
STRUCTURE: chemicalStructure23292
SYNONYMS: coproporphyrinogen
XREF: unificationXref23291
XREF: unificationXref23290
XREF: unificationXref23289

chemicalStructure23292
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="COPROPORPHYRINOGEN_III-atom1" elementType="C" x2="9.6987" y2="0.4599"/> <atom id="COPROPORPHYRINOGEN_III-atom2" elementType="C" x2="4.0445" y2="-2.581"/> <atom id="COPROPORPHYRINOGEN_III-atom3" elementType="C" x2="4.032" y2="0.5204"/> <atom id="COPROPORPHYRINOGEN_III-atom4" elementType="C" x2="8.4365" y2="-3.9473"/> <atom id="COPROPORPHYRINOGEN_III-atom5" elementType="C" x2="8.9082" y2="-1.124"/> <atom id="COPROPORPHYRINOGEN_III-atom6" elementType="C" x2="4.8542" y2="-1.0164"/> <atom id="COPROPORPHYRINOGEN_III-atom7" elementType="C" x2="6.8579" y2="0.9378"/> <atom id="COPROPORPHYRINOGEN_III-atom8" elementType="C" x2="6.9045" y2="-3.0782"/> <atom id="COPROPORPHYRINOGEN_III-atom9" elementType="C" x2="8.4312" y2="1.7381"/> <atom id="COPROPORPHYRINOGEN_III-atom10" elementType="C" x2="5.3258" y2="1.8069"/> <atom id="COPROPORPHYRINOGEN_III-atom11" elementType="C" x2="9.2102" y2="2.0356"/> <atom id="COPROPORPHYRINOGEN_III-atom12" elementType="C" x2="4.5549" y2="2.1251"/> <atom id="COPROPORPHYRINOGEN_III-atom13" elementType="C" x2="5.2989" y2="-3.857"/> <atom id="COPROPORPHYRINOGEN_III-atom14" elementType="C" x2="9.7298" y2="-2.6642"/> <atom id="COPROPORPHYRINOGEN_III-atom15" elementType="C" x2="8.8738" y2="0.3368"/> <atom id="COPROPORPHYRINOGEN_III-atom16" elementType="C" x2="4.8693" y2="-2.4579"/> <atom id="COPROPORPHYRINOGEN_III-atom17" elementType="C" x2="8.4883" y2="-0.3926"/> <atom id="COPROPORPHYRINOGEN_III-atom18" elementType="C" x2="5.2549" y2="-1.7286"/> <atom id="COPROPORPHYRINOGEN_III-atom19" elementType="C" x2="7.5871" y2="0.5524"/> <atom id="COPROPORPHYRINOGEN_III-atom20" elementType="C" x2="6.1753" y2="-2.6927"/> <atom id="COPROPORPHYRINOGEN_III-atom21" elementType="C" x2="5.2589" y2="-0.3064"/> <atom id="COPROPORPHYRINOGEN_III-atom22" elementType="C" x2="7.6155" y2="-2.715"/> <atom id="COPROPORPHYRINOGEN_III-atom23" elementType="C" x2="6.1458" y2="0.5757"/> <atom id="COPROPORPHYRINOGEN_III-atom24" elementType="C" x2="8.5218" y2="-1.8523"/> <atom id…

unificationXref23291
type: unificationXref
DB: CapCyc
ID: COPROPORPHYRINOGEN_III

unificationXref23290
type: unificationXref
DB: CAS
ID: 2624-63-7

unificationXref23289
type: unificationXref
DB: LIGAND
ID: C03263

unificationXref23286
type: unificationXref
DB: CapCyc
ID: UROGENDECARBOX-RXN

phys-ent-participant23298
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23296
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23296
type: protein
NAME: UROPORPHYRINOGEN DECARBOXYLASE
ORGANISM: bioSource20982
XREF: unificationXref23297

unificationXref23297
type: unificationXref
DB: CapCyc
ID: SGNU200653-MONOMER

unificationXref23295
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-437

catalysis23283
type: catalysis
CONTROLLED: biochemicalReaction23274
CONTROLLER: phys-ent-participant23030
NAME: hydroxycinnamoyl-CoA hydratase lyase
XREF: unificationXref23284

biochemicalReaction23274
type: biochemicalReaction
COMMENT: Involved, together with EC 4.2.1.101 in the production of vanillin from trans-ferulic acid. Vanillin is converted to vanillate by EC 1.2.1.67.
EC-NUMBER: 4.1.2.41
LEFT: phys-ent-participant23025
NAME: Vanillin synthase
RIGHT: phys-ent-participant21049
RIGHT: phys-ent-participant23282
XREF: unificationXref23275

phys-ent-participant23025
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23021
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23021
type: smallMolecule
MOLECULAR-WEIGHT: 961.721
NAME: 4-hydroxy-3-methoxyphenyl-beta-hydroxypropionyl-CoA
STRUCTURE: chemicalStructure23024
SYNONYMS: 3-hydroxy-3-(4-hydroxy-3-methoxyphenyl)propionyl-CoA
XREF: unificationXref23023
XREF: unificationXref23022

chemicalStructure23024
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom1" elementType="C" x2="246021.0" y2="-38350.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom2" elementType="C" x2="42266.0" y2="-32192.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom3" elementType="C" x2="59901.0" y2="-33029.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom4" elementType="N" x2="45345.0" y2="-130714.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom5" elementType="O" x2="118399.0" y2="-38350.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom6" elementType="O" x2="170738.0" y2="-1404.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom7" elementType="O" x2="75012.0" y2="-7562.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom8" elementType="O" x2="95726.0" y2="-41712.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom9" elementType="O" x2="0.0" y2="-50382.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom10" elementType="O" x2="0.0" y2="-22401.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom11" elementType="O" x2="228386.0" y2="-59347.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom12" elementType="O" x2="192038.0" y2="-3352.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom13" elementType="O" x2="63251.0" y2="0.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom14" elementType="O" x2="87881.0" y2="-66896.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom15" elementType="O" x2="81724.0" y2="-27709.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom16" elementType="O" x2="81724.0" y2="-55702.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom17" elementType="O" x2="13990.0" y2="-64384.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom18" elementType="O" x2="13990.0" y2="-8399.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom19" elementType="C" x2="33313.0" y2="-95726.0"/> <atom id="4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA-atom20" eleme…

unificationXref23023
type: unificationXref
DB: CapCyc
ID: 4-HYDROXY-ETCETERA-HYDROXYPROPIONYL-COA

unificationXref23022
type: unificationXref
DB: LIGAND
ID: C07303

phys-ent-participant23282
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule23276
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule23276
type: smallMolecule
MOLECULAR-WEIGHT: 152.149
NAME: vanillin
STRUCTURE: chemicalStructure23281
SYNONYMS: 4-hydroxy-3-methoxybenzaldehyde
XREF: unificationXref23280
XREF: unificationXref23279
XREF: unificationXref23278
XREF: unificationXref23277

chemicalStructure23281
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="VANILLIN-atom1" elementType="O" x2="30790.0" y2="14438.0"/> <atom id="VANILLIN-atom2" elementType="C" x2="37934.0" y2="18563.0"/> <atom id="VANILLIN-atom3" elementType="C" x2="30790.0" y2="6188.0"/> <atom id="VANILLIN-atom4" elementType="C" x2="37934.0" y2="2062.0"/> <atom id="VANILLIN-atom5" elementType="C" x2="23645.0" y2="2062.0"/> <atom id="VANILLIN-atom6" elementType="C" x2="37934.0" y2="-6188.0"/> <atom id="VANILLIN-atom7" elementType="O" x2="16500.0" y2="6188.0"/> <atom id="VANILLIN-atom8" elementType="C" x2="23645.0" y2="-6188.0"/> <atom id="VANILLIN-atom9" elementType="C" x2="45079.0" y2="-10313.0"/> <atom id="VANILLIN-atom10" elementType="C" x2="30789.0" y2="-10313.0"/> <atom id="VANILLIN-atom11" elementType="O" x2="45079.0" y2="-18563.0"/> <bond id="VANILLIN-bond1" atomRefs="VANILLIN-atom1 VANILLIN-atom2" order="1"/> <bond id="VANILLIN-bond2" atomRefs="VANILLIN-atom1 VANILLIN-atom3" order="1"/> <bond id="VANILLIN-bond3" atomRefs="VANILLIN-atom3 VANILLIN-atom4" order="2"/> <bond id="VANILLIN-bond4" atomRefs="VANILLIN-atom3 VANILLIN-atom5" order="1"/> <bond id="VANILLIN-bond5" atomRefs="VANILLIN-atom4 VANILLIN-atom6" order="1"/> <bond id="VANILLIN-bond6" atomRefs="VANILLIN-atom5 VANILLIN-atom7" order="1"/> <bond id="VANILLIN-bond7" atomRefs="VANILLIN-atom5 VANILLIN-atom8" order="2"/> <bond id="VANILLIN-bond8" atomRefs="VANILLIN-atom6 VANILLIN-atom9" order="1"/> <bond id="VANILLIN-bond9" atomRefs="VANILLIN-atom6 VANILLIN-atom10" order="2"/> <bond id="VANILLIN-bond10" atomRefs="VANILLIN-atom9 VANILLIN-atom11" order="2"/> <bond id="VANILLIN-bond11" atomRefs="VANILLIN-atom8 VANILLIN-atom10" order="1"/> <formula concise="C 8 H 8 O 3" formalCharge="0"/> 152.149 C(=O)C1(C=C(OC)C(O)=CC=1)

unificationXref23280
type: unificationXref
DB: CapCyc
ID: VANILLIN

unificationXref23279
type: unificationXref
DB: CAS
ID: 121-33-5

unificationXref23278
type: unificationXref
DB: NCI
ID: 403658

unificationXref23277
type: unificationXref
DB: LIGAND
ID: C00755

unificationXref23275
type: unificationXref
DB: CapCyc
ID: 4.1.2.41-RXN

phys-ent-participant23030
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23028
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23028
type: protein
COMMENT: This gene is predicted to be present and functional in capsaicin biosynthesis of |FRAME: TAX-4071| and experimental proof is still awaited |CITS: [15918882]|.
NAME: MONOMER-13534
ORGANISM: bioSource20982
XREF: unificationXref23029

unificationXref23029
type: unificationXref
DB: CapCyc
ID: MONOMER-13534

unificationXref23284
type: unificationXref
DB: CapCyc
ID: ENZRXN-14508

catalysis23249
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23253
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
XREF: unificationXref23250

biochemicalReaction23206
type: biochemicalReaction
DELTA-G: 5.7
EC-NUMBER: 4.1.2.13
LEFT: phys-ent-participant23213
NAME: Fructose-bisphosphate aldolase
RIGHT: phys-ent-participant22063
RIGHT: phys-ent-participant22057
SYNONYMS: Fructose-1,6-bisphosphate triosephosphate-lyase
SYNONYMS: Aldolase
XREF: unificationXref23207

unificationXref23207
type: unificationXref
DB: CapCyc
ID: F16ALDOLASE-RXN

phys-ent-participant23253
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23251
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23251
type: protein
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23252

unificationXref23252
type: unificationXref
DB: CapCyc
ID: SGNU196114-MONOMER

unificationXref23250
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-8

catalysis23244
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23248
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
XREF: unificationXref23245

phys-ent-participant23248
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23246
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23246
type: protein
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23247

unificationXref23247
type: unificationXref
DB: CapCyc
ID: SGNU196115-MONOMER

unificationXref23245
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-9

catalysis23239
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23243
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
XREF: unificationXref23240

phys-ent-participant23243
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23241
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23241
type: protein
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23242

unificationXref23242
type: unificationXref
DB: CapCyc
ID: SGNU196355-MONOMER

unificationXref23240
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-47

catalysis23234
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23238
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
XREF: unificationXref23235

phys-ent-participant23238
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23236
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23236
type: protein
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23237

unificationXref23237
type: unificationXref
DB: CapCyc
ID: SGNU196356-MONOMER

unificationXref23235
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-48

catalysis23229
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23233
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
XREF: unificationXref23230

phys-ent-participant23233
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23231
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23231
type: protein
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23232

unificationXref23232
type: unificationXref
DB: CapCyc
ID: SGNU196550-MONOMER

unificationXref23230
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-69

catalysis23224
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23228
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
XREF: unificationXref23225

phys-ent-participant23228
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23226
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23226
type: protein
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23227

unificationXref23227
type: unificationXref
DB: CapCyc
ID: SGNU196897-MONOMER

unificationXref23225
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-117

catalysis23219
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23223
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
XREF: unificationXref23220

phys-ent-participant23223
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23221
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23221
type: protein
NAME: FRUCTOSE-BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23222

unificationXref23222
type: unificationXref
DB: CapCyc
ID: SGNU197971-MONOMER

unificationXref23220
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-241

catalysis23214
type: catalysis
CONTROLLED: biochemicalReaction23206
CONTROLLER: phys-ent-participant23218
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
XREF: unificationXref23215

phys-ent-participant23218
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23216
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23216
type: protein
NAME: FRUCTOSE BISPHOSPHATE ALDOLASE
ORGANISM: bioSource20982
XREF: unificationXref23217

unificationXref23217
type: unificationXref
DB: CapCyc
ID: SGNU203523-MONOMER

unificationXref23215
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-623

catalysis23135
type: catalysis
CONTROLLED: biochemicalReaction23117
CONTROLLER: phys-ent-participant23139
NAME: anthranilate synthase
XREF: unificationXref23136

biochemicalReaction23117
type: biochemicalReaction
EC-NUMBER: 4.1.3.27
LEFT: phys-ent-participant21755
LEFT: phys-ent-participant21089
NAME: Anthranilate synthase
RIGHT: phys-ent-participant23124
RIGHT: phys-ent-participant21010
RIGHT: phys-ent-participant21095
SYNONYMS: anthranilate synthesis
XREF: unificationXref23118

phys-ent-participant21755
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21749
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21749
type: smallMolecule
MOLECULAR-WEIGHT: 226.185
NAME: chorismate
STRUCTURE: chemicalStructure21754
SYNONYMS: chorismic acid
XREF: unificationXref21753
XREF: unificationXref21752
XREF: unificationXref21751
XREF: unificationXref21750

chemicalStructure21754
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CHORISMATE-atom1" elementType="C" x2="1.3528" y2="-2.4032"/> <atom id="CHORISMATE-atom2" elementType="O" x2="0.0" y2="-4.4182"/> <atom id="CHORISMATE-atom3" elementType="O" x2="8.793" y2="0.0"/> <atom id="CHORISMATE-atom4" elementType="O" x2="2.1586" y2="-5.5405"/> <atom id="CHORISMATE-atom5" elementType="O" x2="8.8506" y2="-2.3456"/> <atom id="CHORISMATE-atom6" elementType="O" x2="2.0721" y2="-1.1945"/> <atom id="CHORISMATE-atom7" elementType="C" x2="5.771" y2="-0.0576"/> <atom id="CHORISMATE-atom8" elementType="C" x2="4.2311" y2="-0.0576"/> <atom id="CHORISMATE-atom9" elementType="C" x2="5.771" y2="-2.4174"/> <atom id="CHORISMATE-atom10" elementType="O" x2="3.4395" y2="-3.5401"/> <atom id="CHORISMATE-atom11" elementType="C" x2="1.3669" y2="-4.4182"/> <atom id="CHORISMATE-atom12" elementType="C" x2="8.1308" y2="-1.1945"/> <atom id="CHORISMATE-atom13" elementType="C" x2="2.1156" y2="-3.5401"/> <atom id="CHORISMATE-atom14" elementType="C" x2="6.6627" y2="-1.1945"/> <atom id="CHORISMATE-atom15" elementType="C" x2="3.4395" y2="-1.1945"/> <atom id="CHORISMATE-atom16" elementType="C" x2="4.2311" y2="-2.4174"/> <bond id="CHORISMATE-bond1" atomRefs="CHORISMATE-atom15 CHORISMATE-atom16" order="1"/> <bond id="CHORISMATE-bond2" atomRefs="CHORISMATE-atom12 CHORISMATE-atom14" order="1"/> <bond id="CHORISMATE-bond3" atomRefs="CHORISMATE-atom11 CHORISMATE-atom13" order="1"/> <bond id="CHORISMATE-bond4" atomRefs="CHORISMATE-atom16 CHORISMATE-atom10" order="1"/> <bond id="CHORISMATE-bond5" atomRefs="CHORISMATE-atom10 CHORISMATE-atom13" order="1"/> <bond id="CHORISMATE-bond6" atomRefs="CHORISMATE-atom9 CHORISMATE-atom16" order="1"/> <bond id="CHORISMATE-bond7" atomRefs="CHORISMATE-atom9 CHORISMATE-atom14" order="2"/> <bond id="CHORISMATE-bond8" atomRefs="CHORISMATE-atom8 CHORISMATE-atom15" order="1"/> <bond id="CHORISMATE-bond9" atomRefs="CHORISMATE-atom7 CHORISMATE-atom14" order="1"/> <bond id="CHORISMATE-bond10" atomRefs="CHORISMATE-atom7 CHORISMATE-atom8" order="2"/> <b…

unificationXref21753
type: unificationXref
DB: CapCyc
ID: CHORISMATE

unificationXref21752
type: unificationXref
DB: CAS
ID: 617-12-9

unificationXref21751
type: unificationXref
DB: LIGAND
ID: C00251

unificationXref21750
type: unificationXref
DB: CAS
ID: 55508-12-8

unificationXref23118
type: unificationXref
DB: CapCyc
ID: ANTHRANSYN-RXN

phys-ent-participant23139
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23137
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23137
type: protein
NAME: anthranilate synthase
ORGANISM: bioSource20982
XREF: unificationXref23138

unificationXref23138
type: unificationXref
DB: CapCyc
ID: SGNU197089-MONOMER

unificationXref23136
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-137

catalysis23130
type: catalysis
CONTROLLED: biochemicalReaction23117
CONTROLLER: phys-ent-participant23134
NAME: anthranilate synthase
XREF: unificationXref23131

phys-ent-participant23134
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23132
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23132
type: protein
NAME: anthranilate synthase
ORGANISM: bioSource20982
XREF: unificationXref23133

unificationXref23133
type: unificationXref
DB: CapCyc
ID: SGNU201570-MONOMER

unificationXref23131
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-506

catalysis23125
type: catalysis
CONTROLLED: biochemicalReaction23117
CONTROLLER: phys-ent-participant23129
NAME: anthranilate synthase
XREF: unificationXref23126

phys-ent-participant23129
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23127
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23127
type: protein
NAME: anthranilate synthase
ORGANISM: bioSource20982
XREF: unificationXref23128

unificationXref23128
type: unificationXref
DB: CapCyc
ID: SGNU199208-MONOMER

unificationXref23126
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-749

catalysis23102
type: catalysis
CONTROLLED: biochemicalReaction23095
CONTROLLER: phys-ent-participant23106
NAME: isocitrate lyase
XREF: unificationXref23103

biochemicalReaction23095
type: biochemicalReaction
EC-NUMBER: 4.1.3.1
LEFT: phys-ent-participant22996
NAME: Isocitrate lyase
RIGHT: phys-ent-participant23094
RIGHT: phys-ent-participant21430
SYNONYMS: ICL
SYNONYMS: Isocitratase
SYNONYMS: Isocitritase
SYNONYMS: Isocitrase
SYNONYMS: isocitrate cleavage
SYNONYMS: glyoxylate-succinate condensation
XREF: unificationXref23096

unificationXref23096
type: unificationXref
DB: CapCyc
ID: ISOCIT-CLEAV-RXN

phys-ent-participant23106
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23104
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23104
type: protein
NAME: isocitrate lyase
ORGANISM: bioSource20982
XREF: unificationXref23105

unificationXref23105
type: unificationXref
DB: CapCyc
ID: SGNU196812-MONOMER

unificationXref23103
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-106

catalysis23097
type: catalysis
CONTROLLED: biochemicalReaction23095
CONTROLLER: phys-ent-participant23101
NAME: isocitrate lyase
XREF: unificationXref23098

phys-ent-participant23101
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23099
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23099
type: protein
NAME: isocitrate lyase
ORGANISM: bioSource20982
XREF: unificationXref23100

unificationXref23100
type: unificationXref
DB: CapCyc
ID: SGNU197132-MONOMER

unificationXref23098
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-143

catalysis23054
type: catalysis
CONTROLLED: biochemicalReaction23046
CONTROLLER: phys-ent-participant23058
NAME: ENOLASE
XREF: unificationXref23055

biochemicalReaction23046
type: biochemicalReaction
DELTA-G: 0.4
EC-NUMBER: 4.2.1.11
LEFT: phys-ent-participant21923
NAME: Phosphopyruvate hydratase
RIGHT: phys-ent-participant23048
RIGHT: phys-ent-participant20951
SYNONYMS: 2-phosphoglycerate dehydratase
SYNONYMS: Enolase
SYNONYMS: 2-phosphoglycerate dehydration
XREF: unificationXref23047

phys-ent-participant21923
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule21918
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule21918
type: smallMolecule
MOLECULAR-WEIGHT: 186.058
NAME: 2-phosphoglycerate
STRUCTURE: chemicalStructure21922
SYNONYMS: phosphoglycerate
SYNONYMS: 2-phosphoglyceric acid
SYNONYMS: 2-pg
SYNONYMS: 2-P-glycerate
SYNONYMS: glycerate 2-phosphate
SYNONYMS: 2-phospho-D-glycerate
SYNONYMS: 2-P-D-glycerate
SYNONYMS: D-Glycerate 2-phosphate
XREF: unificationXref21921
XREF: unificationXref21920
XREF: unificationXref21919

chemicalStructure21922
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2-PG-atom1" elementType="O" x2="4.1501" y2="-5.5675"/> <atom id="2-PG-atom2" elementType="O" x2="2.0788" y2="0.0"/> <atom id="2-PG-atom3" elementType="O" x2="0.0" y2="-5.5675"/> <atom id="2-PG-atom4" elementType="O" x2="4.1501" y2="-3.1713"/> <atom id="2-PG-atom5" elementType="O" x2="0.7051" y2="-1.5107"/> <atom id="2-PG-atom6" elementType="O" x2="3.4653" y2="-1.502"/> <atom id="2-PG-atom7" elementType="C" x2="0.6917" y2="-4.3693"/> <atom id="2-PG-atom8" elementType="O" x2="2.076" y2="-2.9894"/> <atom id="2-PG-atom9" elementType="C" x2="3.4585" y2="-4.3693"/> <atom id="2-PG-atom10" elementType="C" x2="2.0751" y2="-4.3693"/> <atom id="2-PG-atom11" elementType="P" x2="2.105" y2="-1.4909"/> <bond id="2-PG-bond1" atomRefs="2-PG-atom9 2-PG-atom10" order="1"/> <bond id="2-PG-bond2" atomRefs="2-PG-atom8 2-PG-atom11" order="1"/> <bond id="2-PG-bond3" atomRefs="2-PG-atom10 2-PG-atom8" order="1"/> <bond id="2-PG-bond4" atomRefs="2-PG-atom7 2-PG-atom10" order="1"/> <bond id="2-PG-bond5" atomRefs="2-PG-atom6 2-PG-atom11" order="1"/> <bond id="2-PG-bond6" atomRefs="2-PG-atom5 2-PG-atom11" order="1"/> <bond id="2-PG-bond7" atomRefs="2-PG-atom4 2-PG-atom9" order="1"/> <bond id="2-PG-bond8" atomRefs="2-PG-atom3 2-PG-atom7" order="1"/> <bond id="2-PG-bond9" atomRefs="2-PG-atom2 2-PG-atom11" order="2"/> <bond id="2-PG-bond10" atomRefs="2-PG-atom1 2-PG-atom9" order="2"/> <formula concise="C 3 H 7 O 7 P 1" formalCharge="0"/> 186.058 C(O)C(C(O)=O)OP(O)(O)=O

unificationXref21921
type: unificationXref
DB: CapCyc
ID: 2-PG

unificationXref21920
type: unificationXref
DB: CAS
ID: 2553-59-5

unificationXref21919
type: unificationXref
DB: LIGAND
ID: C00631

unificationXref23047
type: unificationXref
DB: CapCyc
ID: 2PGADEHYDRAT-RXN

phys-ent-participant23058
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23056
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23056
type: protein
NAME: ENOLASE
ORGANISM: bioSource20982
XREF: unificationXref23057

unificationXref23057
type: unificationXref
DB: CapCyc
ID: SGNU197276-MONOMER

unificationXref23055
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-170

catalysis23049
type: catalysis
CONTROLLED: biochemicalReaction23046
CONTROLLER: phys-ent-participant23053
NAME: ENOLASE
XREF: unificationXref23050

phys-ent-participant23053
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein23051
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein23051
type: protein
NAME: ENOLASE
ORGANISM: bioSource20982
XREF: unificationXref23052

unificationXref23052
type: unificationXref
DB: CapCyc
ID: SGNU198251-MONOMER

unificationXref23050
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-281

catalysis23035
type: catalysis
CONTROLLED: biochemicalReaction23031
CONTROLLER: phys-ent-participant22645
NAME: ENOYL COA HYDRATASE
XREF: unificationXref23036

biochemicalReaction23031
type: biochemicalReaction
EC-NUMBER: 4.2.1.55
LEFT: phys-ent-participant22692
NAME: 3-hydroxybutyryl-CoA dehydratase
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant22701
SYNONYMS: Crotonase
XREF: unificationXref23032

phys-ent-participant22692
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22688
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22688
type: smallMolecule
MOLECULAR-WEIGHT: 853.624
NAME: 3-hydroxybutyryl-CoA
STRUCTURE: chemicalStructure22691
SYNONYMS: 3-OH-butyryl-CoA
SYNONYMS: OH-butyryl-CoA
SYNONYMS: β-hydroxybutyryl-S-CoA
SYNONYMS: D-3-hydroxybutyryl-CoA
SYNONYMS: hydroxy-butyryl-CoA
SYNONYMS: β-hydroxybutyryl-CoA
SYNONYMS: (R)-3-Hydroxybutanoyl-CoA
SYNONYMS: (3R)-3-Hydroxybutanoyl-CoA
SYNONYMS: 3-hydroxybutanoyl-CoA
XREF: unificationXref22690
XREF: unificationXref22689

chemicalStructure22691
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CPD-650-atom1" elementType="O" x2="1.4955" y2="0.8669"/> <atom id="CPD-650-atom2" elementType="O" x2="-0.8429" y2="1.5686"/> <atom id="CPD-650-atom3" elementType="C" x2="2.1157" y2="1.3154"/> <atom id="CPD-650-atom4" elementType="C" x2="1.8886" y2="2.02"/> <atom id="CPD-650-atom5" elementType="C" x2="1.1231" y2="2.02"/> <atom id="CPD-650-atom6" elementType="C" x2="0.885" y2="1.3044"/> <atom id="CPD-650-atom7" elementType="C" x2="0.1827" y2="1.0836"/> <atom id="CPD-650-atom8" elementType="P" x2="-2.0395" y2="1.5822"/> <atom id="CPD-650-atom9" elementType="O" x2="-2.0509" y2="0.849"/> <atom id="CPD-650-atom10" elementType="O" x2="-2.7937" y2="1.5693"/> <atom id="CPD-650-atom11" elementType="O" x2="-2.0447" y2="3.2155"/> <atom id="CPD-650-atom12" elementType="O" x2="-1.2631" y2="4.6835"/> <atom id="CPD-650-atom13" elementType="P" x2="-2.0395" y2="4.6739"/> <atom id="CPD-650-atom14" elementType="O" x2="-2.7978" y2="4.686"/> <atom id="CPD-650-atom15" elementType="O" x2="-2.0364" y2="5.4364"/> <atom id="CPD-650-atom16" elementType="C" x2="-0.6162" y2="4.3099"/> <atom id="CPD-650-atom17" elementType="C" x2="0.0333" y2="4.6848"/> <atom id="CPD-650-atom18" elementType="C" x2="0.6828" y2="4.3097"/> <atom id="CPD-650-atom19" elementType="C" x2="0.0335" y2="5.4348"/> <atom id="CPD-650-atom20" elementType="C" x2="0.0258" y2="3.8554"/> <atom id="CPD-650-atom21" elementType="C" x2="1.3324" y2="4.6846"/> <atom id="CPD-650-atom22" elementType="O" x2="0.6827" y2="3.5597"/> <atom id="CPD-650-atom23" elementType="O" x2="1.3325" y2="5.4346"/> <atom id="CPD-650-atom24" elementType="N" x2="1.9818" y2="4.3095"/> <atom id="CPD-650-atom25" elementType="C" x2="2.6314" y2="4.6844"/> <atom id="CPD-650-atom26" elementType="C" x2="3.2809" y2="4.3093"/> <atom id="CPD-650-atom27" elementType="C" x2="3.9305" y2="4.6842"/> <atom id="CPD-650-atom28" elementType="N" x2="4.5799" y2="4.3091"/> <atom id="CPD-650-atom29" elementType="O" x2="3.9306" y2="5.4342"/> <atom id="CPD-650-atom30" elementT…

unificationXref22690
type: unificationXref
DB: CapCyc
ID: CPD-650

unificationXref22689
type: unificationXref
DB: UMBBD
ID: c0030

phys-ent-participant22701
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22693
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22693
type: smallMolecule
MOLECULAR-WEIGHT: 835.609
NAME: crotonyl-CoA
STRUCTURE: chemicalStructure22700
SYNONYMS: crotonyl-S-CoA
SYNONYMS: crotonyl-coenzyme A
SYNONYMS: crotonoyl-CoA
SYNONYMS: 2-butenoyl-CoA
SYNONYMS: trans-but-2-enoyl-CoA
SYNONYMS: but-2-enoyl-CoA
SYNONYMS: trans-butyr-2-enoyl-CoA
XREF: unificationXref22699
XREF: unificationXref22698
XREF: unificationXref22697
XREF: unificationXref22696
XREF: unificationXref22695
XREF: unificationXref22694

chemicalStructure22700
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="CROTONYL-COA-atom1" elementType="O" x2="-0.517" y2="1.3669"/> <atom id="CROTONYL-COA-atom2" elementType="O" x2="-2.8554" y2="2.0686"/> <atom id="CROTONYL-COA-atom3" elementType="C" x2="0.1032" y2="1.8154"/> <atom id="CROTONYL-COA-atom4" elementType="C" x2="-0.1239" y2="2.52"/> <atom id="CROTONYL-COA-atom5" elementType="C" x2="-0.8894" y2="2.52"/> <atom id="CROTONYL-COA-atom6" elementType="C" x2="-1.1275" y2="1.8044"/> <atom id="CROTONYL-COA-atom7" elementType="C" x2="-1.8298" y2="1.5836"/> <atom id="CROTONYL-COA-atom8" elementType="P" x2="-4.052" y2="2.0822"/> <atom id="CROTONYL-COA-atom9" elementType="O" x2="-4.0467" y2="1.224"/> <atom id="CROTONYL-COA-atom10" elementType="O" x2="-4.8062" y2="2.0693"/> <atom id="CROTONYL-COA-atom11" elementType="O" x2="-4.0572" y2="3.7155"/> <atom id="CROTONYL-COA-atom12" elementType="O" x2="-3.2756" y2="5.1835"/> <atom id="CROTONYL-COA-atom13" elementType="P" x2="-4.0562" y2="5.1989"/> <atom id="CROTONYL-COA-atom14" elementType="O" x2="-4.8103" y2="5.186"/> <atom id="CROTONYL-COA-atom15" elementType="O" x2="-4.0489" y2="5.9364"/> <atom id="CROTONYL-COA-atom16" elementType="C" x2="-2.6287" y2="4.8099"/> <atom id="CROTONYL-COA-atom17" elementType="C" x2="-1.9792" y2="5.1848"/> <atom id="CROTONYL-COA-atom18" elementType="C" x2="-1.3297" y2="4.8097"/> <atom id="CROTONYL-COA-atom19" elementType="C" x2="-1.979" y2="5.9348"/> <atom id="CROTONYL-COA-atom20" elementType="C" x2="-1.9867" y2="4.3554"/> <atom id="CROTONYL-COA-atom21" elementType="C" x2="-0.6801" y2="5.1846"/> <atom id="CROTONYL-COA-atom22" elementType="O" x2="-1.3298" y2="4.0597"/> <atom id="CROTONYL-COA-atom23" elementType="O" x2="-0.68" y2="5.9346"/> <atom id="CROTONYL-COA-atom24" elementType="N" x2="-0.0307" y2="4.8095"/> <atom id="CROTONYL-COA-atom25" elementType="C" x2="0.6189" y2="5.1844"/> <atom id="CROTONYL-COA-atom26" elementType="C" x2="1.2684" y2="4.8093"/> <atom id="CROTONYL-COA-atom27" elementType="C" x2="1.918" y2="5.1842"/> <atom id="CROTONYL-COA-atom…

unificationXref22699
type: unificationXref
DB: CapCyc
ID: CROTONYL-COA

unificationXref22698
type: unificationXref
DB: CAS
ID: 992-67-6

unificationXref22697
type: unificationXref
DB: CAS
ID: 102680-35-3

unificationXref22696
type: unificationXref
DB: LIGAND
ID: c00877

unificationXref22695
type: unificationXref
DB: UMBBD
ID: c0032

unificationXref22694
type: unificationXref
DB: LIGAND
ID: C00877

unificationXref23032
type: unificationXref
DB: CapCyc
ID: 3-HYDROXBUTYRYL-COA-DEHYDRATASE-RXN

unificationXref23036
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-109

catalysis23033
type: catalysis
CONTROLLED: biochemicalReaction23031
CONTROLLER: phys-ent-participant22640
NAME: ENOYL-COA HYDRATASE
XREF: unificationXref23034

unificationXref23034
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-499

catalysis23026
type: catalysis
CONTROLLED: biochemicalReaction23019
CONTROLLER: phys-ent-participant23030
NAME: hydroxycinnamoyl-CoA hydratase lyase
XREF: unificationXref23027

biochemicalReaction23019
type: biochemicalReaction
EC-NUMBER: 4.2.1.101
LEFT: phys-ent-participant21482
LEFT: phys-ent-participant20951
NAME: Trans-feruloyl-CoA hydratase
RIGHT: phys-ent-participant23025
XREF: unificationXref23020

unificationXref23020
type: unificationXref
DB: CapCyc
ID: 4.2.1.101-RXN

unificationXref23027
type: unificationXref
DB: CapCyc
ID: ENZRXN-14411

catalysis22978
type: catalysis
CONTROLLED: biochemicalReaction22956
CONTROLLER: phys-ent-participant22982
NAME: CARBONIC ANHYDRASE
XREF: unificationXref22979

biochemicalReaction22956
type: biochemicalReaction
EC-NUMBER: 4.2.1.1
LEFT: phys-ent-participant22962
NAME: Carbonate dehydratase
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant21166
SYNONYMS: Carbonic anhydrase
SYNONYMS: Carbonic dehydratase
XREF: unificationXref22957

phys-ent-participant22962
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22958
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22958
type: smallMolecule
MOLECULAR-WEIGHT: 62.025
NAME: H2CO3
STRUCTURE: chemicalStructure22961
SYNONYMS: carbonic acid
XREF: unificationXref22960
XREF: unificationXref22959

chemicalStructure22961
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="H2CO3-atom1" elementType="C" x2="-0.00578" y2="-0.54913"/> <atom id="H2CO3-atom2" elementType="O" x2="-1.0" y2="-1.0"/> <atom id="H2CO3-atom3" elementType="O" x2="-0.00578" y2="0.54143"/> <atom id="H2CO3-atom4" elementType="O" x2="0.99615" y2="-0.97303"/> <bond id="H2CO3-bond1" atomRefs="H2CO3-atom4 H2CO3-atom1" order="1"/> <bond id="H2CO3-bond2" atomRefs="H2CO3-atom3 H2CO3-atom1" order="2"/> <bond id="H2CO3-bond3" atomRefs="H2CO3-atom2 H2CO3-atom1" order="1"/> <formula concise="C 1 H 2 O 3" formalCharge="0"/> 62.025 C(=O)(O)O

unificationXref22960
type: unificationXref
DB: CapCyc
ID: H2CO3

unificationXref22959
type: unificationXref
DB: CAS
ID: 463-79-6

unificationXref22957
type: unificationXref
DB: CapCyc
ID: CARBODEHYDRAT-RXN

phys-ent-participant22982
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22980
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22980
type: protein
NAME: CARBONIC ANHYDRASE
ORGANISM: bioSource20982
XREF: unificationXref22981

unificationXref22981
type: unificationXref
DB: CapCyc
ID: SGNU196521-MONOMER

unificationXref22979
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-66

catalysis22973
type: catalysis
CONTROLLED: biochemicalReaction22956
CONTROLLER: phys-ent-participant22977
NAME: CARBONATE DEHYDRATASE
XREF: unificationXref22974

phys-ent-participant22977
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22975
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22975
type: protein
NAME: CARBONATE DEHYDRATASE
ORGANISM: bioSource20982
XREF: unificationXref22976

unificationXref22976
type: unificationXref
DB: CapCyc
ID: SGNU200267-MONOMER

unificationXref22974
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-411

catalysis22968
type: catalysis
CONTROLLED: biochemicalReaction22956
CONTROLLER: phys-ent-participant22972
NAME: CARBONIC ANHYDRASE
XREF: unificationXref22969

phys-ent-participant22972
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22970
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22970
type: protein
NAME: CARBONIC ANHYDRASE
ORGANISM: bioSource20982
XREF: unificationXref22971

unificationXref22971
type: unificationXref
DB: CapCyc
ID: SGNU201419-MONOMER

unificationXref22969
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-476

catalysis22963
type: catalysis
CONTROLLED: biochemicalReaction22956
CONTROLLER: phys-ent-participant22967
NAME: CARBONIC ANHYDRASE
XREF: unificationXref22964

phys-ent-participant22967
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22965
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22965
type: protein
NAME: CARBONIC ANHYDRASE
ORGANISM: bioSource20982
XREF: unificationXref22966

unificationXref22966
type: unificationXref
DB: CapCyc
ID: SGNU201358-MONOMER

unificationXref22964
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-494

catalysis22949
type: catalysis
CONTROLLED: biochemicalReaction22936
CONTROLLER: phys-ent-participant22953
NAME: DIHYDRODIPICOLINATE SYNTHASE
XREF: unificationXref22950

biochemicalReaction22936
type: biochemicalReaction
EC-NUMBER: 4.2.1.52
LEFT: phys-ent-participant21010
LEFT: phys-ent-participant22943
NAME: dihydrodipicolinate synthase
RIGHT: phys-ent-participant22765
RIGHT: phys-ent-participant22948
SYNONYMS: DHDPS
XREF: unificationXref22937

phys-ent-participant22948
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22944
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22944
type: smallMolecule
MOLECULAR-WEIGHT: 169.137
NAME: L-2,3-dihydrodipicolinate
STRUCTURE: chemicalStructure22947
SYNONYMS: 2,3-dihydrodipicolinate
SYNONYMS: dihydrodipicolinate
SYNONYMS: 2,3-di-H-dipicolinate
XREF: unificationXref22946
XREF: unificationXref22945

chemicalStructure22947
type: chemicalStructure
STRUCTURE-FORMAT: CML
STRUCTURE-DATA: <atom id="2,3-dihydrodipicolinate-atom1" elementType="O" x2="-1.0" y2="-0.44079"/> <atom id="2,3-dihydrodipicolinate-atom2" elementType="O" x2="0.99671" y2="-0.44079"/> <atom id="2,3-dihydrodipicolinate-atom3" elementType="N" x2="0.0" y2="-0.61842"/> <atom id="2,3-dihydrodipicolinate-atom4" elementType="C" x2="-0.33224" y2="-0.04605"/> <atom id="2,3-dihydrodipicolinate-atom5" elementType="C" x2="0.32895" y2="-0.42763"/> <atom id="2,3-dihydrodipicolinate-atom6" elementType="C" x2="-0.33224" y2="-0.42763"/> <atom id="2,3-dihydrodipicolinate-atom7" elementType="O" x2="-0.66118" y2="-1.0"/> <atom id="2,3-dihydrodipicolinate-atom8" elementType="C" x2="0.0" y2="0.14474"/> <atom id="2,3-dihydrodipicolinate-atom9" elementType="C" x2="-0.66118" y2="-0.61842"/> <atom id="2,3-dihydrodipicolinate-atom10" elementType="C" x2="0.32895" y2="-0.04605"/> <atom id="2,3-dihydrodipicolinate-atom11" elementType="O" x2="0.65789" y2="-1.0"/> <atom id="2,3-dihydrodipicolinate-atom12" elementType="C" x2="0.65789" y2="-0.61842"/> <bond id="2,3-dihydrodipicolinate-bond1" atomRefs="2,3-dihydrodipicolinate-atom12 2,3-dihydrodipicolinate-atom5" order="1"/> <bond id="2,3-dihydrodipicolinate-bond2" atomRefs="2,3-dihydrodipicolinate-atom11 2,3-dihydrodipicolinate-atom12" order="1"/> <bond id="2,3-dihydrodipicolinate-bond3" atomRefs="2,3-dihydrodipicolinate-atom10 2,3-dihydrodipicolinate-atom5" order="1"/> <bond id="2,3-dihydrodipicolinate-bond4" atomRefs="2,3-dihydrodipicolinate-atom9 2,3-dihydrodipicolinate-atom6" order="1"/> <bond id="2,3-dihydrodipicolinate-bond5" atomRefs="2,3-dihydrodipicolinate-atom8 2,3-dihydrodipicolinate-atom4" order="2"/> <bond id="2,3-dihydrodipicolinate-bond6" atomRefs="2,3-dihydrodipicolinate-atom8 2,3-dihydrodipicolinate-atom10" order="1"/> <bond id="2,3-dihydrodipicolinate-bond7" atomRefs="2,3-dihydrodipicolinate-atom7 2,3-dihydrodipicolinate-atom9" order="1"/> <bond id="2,3-dihydrodipicolinate-bond8" atomRefs="2,3-dihydrodipicolinate-atom6 2,3-dihydrodipicolinate-ato…

unificationXref22946
type: unificationXref
DB: CapCyc
ID: 2,3-dihydrodipicolinate

unificationXref22945
type: unificationXref
DB: LIGAND
ID: C03340

unificationXref22937
type: unificationXref
DB: CapCyc
ID: DIHYDRODIPICSYN-RXN

phys-ent-participant22953
type: physicalEntityParticipant
PHYSICAL-ENTITY: protein22951
CELLULAR-LOCATION: openControlledVocabulary20983
STOICHIOMETRIC-COEFFICIENT: 1

protein22951
type: protein
NAME: DIHYDRODIPICOLINATE SYNTHASE
ORGANISM: bioSource20982
XREF: unificationXref22952

unificationXref22952
type: unificationXref
DB: CapCyc
ID: SGNU201964-MONOMER

unificationXref22950
type: unificationXref
DB: CapCyc
ID: ENZRXN2KO-535

catalysis22905
type: catalysis
CONTROLLED: biochemicalReaction22867
CONTROLLER: phys-ent-participant22909
NAME: DTDP-GLUCOSE 4-6-DEHYDRATASE
XREF: unificationXref22906

biochemicalReaction22867
type: biochemicalReaction
EC-NUMBER: 4.2.1.46
LEFT: phys-ent-participant22874
NAME: dTDP-glucose 4,6-dehydratase
RIGHT: phys-ent-participant20951
RIGHT: phys-ent-participant22251
XREF: unificationXref22868

phys-ent-participant22874
type: physicalEntityParticipant
PHYSICAL-ENTITY: smallMolecule22869
CELLULAR-LOCATION: openControlledVocabulary20912
STOICHIOMETRIC-COEFFICIENT: 1

smallMolecule22869
type: smallMolecule
MOLECULAR-WEIGHT: 564.333
NAME: dTDP-D-glucose
STRUCTURE: chemicalStructure22873
SYNONYMS: dTDP-glucose
XREF: unificationXref22872
XREF: unificationXref22871
XREF: unificationXref22870

chemicalStructure22873
type: chemicalStructure
STRUCTURE-FORMAT: CML
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unificationXref22872
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DB: CapCyc
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unificationXref22871
type: unificationXref
DB: LIGAND
ID: C00842