There are 3 different datasets of proteins for an unigene build. + Proteins predicted by longest6frame (a SGN script that translate the sequence in the 6 ORF and get the longest) + Proteins predicted by estscan (http://www.ch.embnet.org/software/ESTScan2.html) + Proteins preferred (for each unigene, compare both methods and get the longest protein) For each dataset, exists two files (cds and protein). Also is provided a version of the preferred protein dataset with annotations compatibles with ProteinPilot program. ---------------------------------------- Report: ---------------------------------------- Files: * cds sequences: - cds fasta file: hedyotis_species_cds_predicted_by_estscan.v1.fasta - number of sequences: 4693 - total bases: 1665111 - average sequences length: 354 - maximum sequence length: 1620 - minimum sequence length: 51 * protein sequences: - protein fasta file: hedyotis_species_protein_predicted_by_estscan.v1.fasta - number of sequences: 4693 - total aminoacids: 555037 - average sequences length: 118 - maximum sequence length: 540 - minimum sequence length: 17 * cds sequences: - cds fasta file: hedyotis_species_cds_predicted_by_longest6frame.v1.fasta - number of sequences: 5541 - total bases: 1745181 - average sequences length: 314 - maximum sequence length: 1602 - minimum sequence length: 48 * protein sequences: - protein fasta file: hedyotis_species_protein_predicted_by_longest6frame.v1.fasta - number of sequences: 5541 - total aminoacids: 579775 - average sequences length: 104 - maximum sequence length: 534 - minimum sequence length: 16 * cds sequences: - cds fasta file: hedyotis_species_cds_predicted_by_preferred.v1.fasta - number of sequences: 5179 - total bases: 1871886 - average sequences length: 361 - maximum sequence length: 1620 - minimum sequence length: 48 * protein sequences: - protein fasta file: hedyotis_species_protein_predicted_by_preferred.v1.fasta - number of sequences: 5179 - total aminoacids: 622863 - average sequences length: 120 - maximum sequence length: 540 - minimum sequence length: 16 ----------------------------------------