There are 3 different datasets of proteins for an unigene build.

+ Proteins predicted by longest6frame (a SGN script that translate the sequence in the 6 ORF and get the longest)

+ Proteins predicted by estscan (http://www.ch.embnet.org/software/ESTScan2.html)

+ Proteins preferred (for each unigene, compare both methods and get the longest protein)

For each dataset, exists two files (cds and protein).

Also is provided a version of the preferred protein dataset with annotations compatibles with ProteinPilot program.

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Report:
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+ Unigene Build: Tomato species #2

Files:

	* cds sequences:
		- cds fasta file: tomato_species_cds_predicted_by_estscan.v2.fasta
		- number of sequences: 39967
		- total bases: 26098701
		- average sequences length: 653
		- maximum sequence length: 5235
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_estscan.v2.fasta
		- number of sequences: 39967
		- total aminoacids: 8699567
		- average sequences length: 217
		- maximum sequence length: 1745
		- minimum sequence length: 17

	* cds sequences:
		- cds fasta file: tomato_species_cds_predicted_by_longest6frame.v2.fasta
		- number of sequences: 43366
		- total bases: 24435660
		- average sequences length: 563
		- maximum sequence length: 4395
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_longest6frame.v2.fasta
		- number of sequences: 43366
		- total aminoacids: 8133858
		- average sequences length: 187
		- maximum sequence length: 1465
		- minimum sequence length: 17

	* cds sequences:
		- cds fasta file: tomato_species_cds_predicted_by_preferred.v2.fasta
		- number of sequences: 42257
		- total bases: 27618501
		- average sequences length: 653
		- maximum sequence length: 5235
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_preferred.v2.fasta
		- number of sequences: 42257
		- total aminoacids: 9200584
		- average sequences length: 217
		- maximum sequence length: 1745
		- minimum sequence length: 17


+ Unigene Build: Tomato species #1

Files:
        * cds sequences:
		- cds fasta file: tomato_species_cds_predicted_by_estscan.v1.fasta
		- number of sequences: 34008
		- total bases: 24292557
		- average sequences length: 714
		- maximum sequence length: 5226
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_estscan.v1.fasta
		- number of sequences: 34008
		- total aminoacids: 8064426
		- average sequences length: 237
		- maximum sequence length: 1741
		- minimum sequence length: 9

	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_longest6frame.v1.fasta
		- number of sequences: 35426
		- total aminoacids: 6893059
		- average sequences length: 194
		- maximum sequence length: 1522
		- minimum sequence length: 21

	* cds sequences:
		- cds fasta file: tomato_species_cds_predicted_by_preferred.v1.fasta
		- number of sequences: 20519
		- total bases: 16100889
		- average sequences length: 784
		- maximum sequence length: 5226
		- minimum sequence length: 111
	* protein sequences:
		- protein fasta file: tomato_species_protein_predicted_by_preferred.v1.fasta
		- number of sequences: 34829
		- total aminoacids: 8366356
		- average sequences length: 240
		- maximum sequence length: 1741
		- minimum sequence length: 21


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