There are 3 different datasets of proteins for an unigene build.

+ Proteins predicted by longest6frame (a SGN script that translate the sequence in the 6 ORF and get the longest)

+ Proteins predicted by estscan (http://www.ch.embnet.org/software/ESTScan2.html)

+ Proteins preferred (for each unigene, compare both methods and get the longest protein)

For each dataset, exists two files (cds and protein).

Also is provided a version of the preferred protein dataset with annotations compatibles with ProteinPilot program.



----------------------------------------
Report:
----------------------------------------

Files:



----------------------------------------
Version 2:
----------------------------------------

	* cds sequences:
		- cds fasta file: Nicotiana_tabacum_cds_predicted_by_estscan.v2.fasta
		- number of sequences: 80117
		- total bases: 40799580
		- average sequences length: 509
		- maximum sequence length: 6291
		- minimum sequence length: 51

	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_estscan.v2.fasta
		- number of sequences: 80117
		- total aminoacids: 13599860
		- average sequences length: 169
		- maximum sequence length: 2097
		- minimum sequence length: 17

	* cds sequences:
		- cds fasta file: Nicotiana_tabacum_cds_predicted_by_longest6frame.v2.fasta
		- number of sequences: 87142
		- total bases: 35692089
		- average sequences length: 409
		- maximum sequence length: 6087
		- minimum sequence length: 39

	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_longest6frame.v2.fasta
		- number of sequences: 87142
		- total aminoacids: 11879953
		- average sequences length: 136
		- maximum sequence length: 2029
		- minimum sequence length: 13


	* cds sequences:
		- cds fasta file: Nicotiana_tabacum_cds_predicted_by_preferred.v2.fasta
		- number of sequences: 84602
		- total bases: 43366017
		- average sequences length: 512
		- maximum sequence length: 6291
		- minimum sequence length: 39
	
	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_preferred.v2.fasta
		- number of sequences: 84602
		- total aminoacids: 14448294
		- average sequences length: 170
		- maximum sequence length: 2097
		- minimum sequence length: 13


----------------------------------------
Version 1:
----------------------------------------

	* cds sequences:
		- cds fasta file: Nicotiana_tabacum_cds_predicted_by_estscan.v1.fasta
		- number of sequences: 18899
		- total bases: 11950869
		- average sequences length: 632
		- maximum sequence length: 6090
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_estscan.v1.fasta
		- number of sequences: 18899
		- total aminoacids: 3983623
		- average sequences length: 210
		- maximum sequence length: 2030
		- minimum sequence length: 17

	* cds sequences:
	      Note: This sequence dataset have not any cds longest6frame file

	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_longest6frame.v1.fasta
		- number of sequences: 26877
		- total aminoacids: 4464603
		- average sequences length: 166
		- maximum sequence length: 1972
		- minimum sequence length: 12

	* cds sequences:
		- cds fasta file: Nicotiana_tabacum_cds_predicted_by_preferred.v1.fasta
		- number of sequences: 10541
		- total bases: 7094820
		- average sequences length: 673
		- maximum sequence length: 6090
		- minimum sequence length: 51
	* protein sequences:
		- protein fasta file: Nicotiana_tabacum_protein_predicted_by_preferred.v1.fasta
		- number of sequences: 25398
		- total aminoacids: 4596017
		- average sequences length: 180
		- maximum sequence length: 2030
		- minimum sequence length: 12


----------------------------------------