Table cxgn.public.feature_cvterm

Associate a term from a cv with a feature, for example, GO annotation

Generated by
SchemaSpy

Legend:

Primary key columns

Columns with indexes

Implied relationships

Excluded column relationships

Dashed lines show
implied relationships

< n > number of related tables

Please support this project

Column

Type

Size

Nulls

Auto

Default

Children

Parents

Comments

feature_cvterm_id

serial

√

nextval('feature_cvterm_feature_cvterm_id_seq'::regclass)

feature_cvterm_dbxref.feature_cvterm_id	feature_cvterm_dbxref_feature_cvterm_id_fkey
feature_cvterm_pub.feature_cvterm_id	feature_cvterm_pub_feature_cvterm_id_fkey
feature_cvtermprop.feature_cvterm_id	feature_cvtermprop_feature_cvterm_id_fkey

feature_id

int4

feature.feature_id

feature_cvterm_feature_id_fkey

cvterm_id

int4

cvterm.cvterm_id

feature_cvterm_cvterm_id_fkey

pub_id

int4

pub.pub_id

feature_cvterm_pub_id_fkey

Provenance for the annotation. Each annotation should have a single primary publication (which may be of the appropriate type for computational analyses) where more details can be found. Additional provenance dbxrefs can be attached using feature_cvterm_dbxref

is_not

bool

false

if this is set to true, then this annotation is interpreted as a NEGATIVE annotation - ie the feature does NOT have the specified function, process, component, part, etc. See GO docs for more details

Table contained 0 rows at Wed May 20 01:40 EDT 2009

Indexes:

Column(s)	Type	Sort	Constraint Name
feature_cvterm_id	Primary key	Asc	feature_cvterm_pkey
feature_id + cvterm_id + pub_id	Must be unique	Asc/Asc/Asc	feature_cvterm_c1
feature_id	Performance	Asc	feature_cvterm_idx1
cvterm_id	Performance	Asc	feature_cvterm_idx2
pub_id	Performance	Asc	feature_cvterm_idx3