BLASTX 2.0.11 [Jan-20-2000] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi:15987769 (100,810 letters) Database: genpept 635,529 sequences; 197,985,706 total letters Score E Sequences producing significant alignments: (bits) Value emb|CAA73042.1| (Y12432) polyprotein [Ananas comosus] 575 0.0 dbj|BAA95869.1| (AP002071) Similar to Sorghum bicolor 22 kDa kaf... 546 0.0 gb|AAD27547.1|AF111709_1 (AF111709) polyprotein [Oryza sativa su... 544 0.0 dbj|BAA22515.1| (D90852) ORF_ID:o250#10~similar to [SwissProt Ac... 643 0.0 gb|AAD22153.1|AF061282_6 (AF061282) polyprotein [Sorghum bicolor] 540 e-180 gb|AAF70032.1|AF250878_193 (AF250878) IS2 hypothetical orf [Salm... 629 e-177 gb|AAB18085.1| (U73857) insertion element IS2 hypothetical 34.4 ... 629 e-177 gb|AAC77229.1| (AE000498) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAC76081.1| (AE000386) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAC75899.1| (AE000369) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAC75057.1| (AE000291) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAC74484.1| (AE000237) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAC73464.1| (AE000143) IS2 hypothetical protein [Escherichia ... 629 e-177 gb|AAA97169.1| (U14003) IS2 ORF; alternate gene name yi22 [Esche... 629 e-177 gb|AAA83042.1| (U28375) ORF_f301 [Escherichia coli] 629 e-177 dbj|BAA97890.1| (AP001918) 100 pct identical to sp:P19777[IS2 hy... 629 e-177 dbj|BAA16010.1| (D90851) ORF_ID:o373#9~similar to [PIR Accession... 629 e-177 dbj|BAA16002.1| (D90850) ORF_ID:o373#9~similar to [PIR Accession... 629 e-177 dbj|BAA15819.1| (D90838) ORF_ID:o348#2~similar to [PIR Accession... 629 e-177 dbj|BAA15016.1| (D90779) ORF_ID:o267#7~similar to [PIR Accession... 629 e-177 dbj|BAA15010.1| (D90778) ORF_ID:o267#7~similar to [PIR Accession... 629 e-177 emb|CAA23541.1| (V00279) ORF 2 (AA 1-301) [Escherichia coli] 629 e-177 gb|AAD10297.1| (U82084) unknown [bacteriophage SfX] 626 e-176 dbj|BAA12836.1| (D85613) 37KD protein, similar to YI22-ECOLI [Es... 615 e-173 gb|AAD22158.1|AF061282_11 (AF061282) polyprotein [Sorghum bicolor] 511 e-170 gb|AAD20658.1| (AC006570) putative retroelement pol polyprotein ... 516 e-167 gb|AAA69213.1| (U28377) ORF_o282p; orf2 of V00279 [Escherichia c... 589 e-165 emb|CAB75481.1| (AL138657) copia-like polyprotein [Arabidopsis t... 309 e-164 gb|AAD22339.1|AC006955_25 (AC006955) putative retroelement pol p... 476 e-156 gb|AAF07358.1|AC011665_17 (AC011665) transposase-like protein (T... 554 e-155 gb|AAD44739.1|AF141323_10 (AF141323) TnpF [Shigella flexneri] 554 e-154 emb|CAA37924.1| (X53976) orf 2 [Arabidopsis thaliana] 296 e-151 emb|CAB78169.1| (AL161517) putative retrotransposon [Arabidopsis... 275 e-148 emb|CAB40039.1| (AL049524) putative retrotransposon [Arabidopsis... 275 e-148 dbj|BAB09923.1| (AB005236) copia-like retrotransposable element ... 276 e-144 emb|CAB79135.1| (AL161554) putative transposable element [Arabid... 271 e-140 emb|CAA20201.1| (AL031187) putative transposable element [Arabid... 271 e-140 gb|AAF67363.1| (AF262041) Hypothetical protein T32B20.f [Arabido... 434 e-140 dbj|BAA81778.1| (AP000364) Similar to Transposon MAGGY gag and p... 314 e-136 emb|CAB78181.1| (AL161517) putative reverse-transcriptase-like p... 333 e-133 emb|CAB40024.1| (AL049523) putative reverse-transcriptase-like p... 333 e-133 emb|CAB71063.1| (AL137898) copia-type polyprotein [Arabidopsis t... 263 e-132 gb|AAD38284.1|AC007789_10 (AC007789) putative polyprotein [Oryza... 406 e-132 emb|CAB50739.1| (AJ243722) putative transposase [Ralstonia sp. C... 331 e-131 gb|AAD50001.1|AC007259_14 (AC007259) Hypothetical protein [Arabi... 263 e-130 gb|AAC26240.1| (AF077407) contains similarity to reverse transcr... 323 e-127 gb|AAC74650.1| (AE000253) orf, hypothetical protein [Escherichia... 460 e-126 emb|CAB75469.1| (AL138659) copia-type reverse transcriptase-like... 266 e-125 dbj|BAA89559.1| (AP001072) Similar to polyprotein. (AF061282) [O... 298 e-123 dbj|BAA90794.1| (AP001168) Similar to 22 kDa kafirin cluster; Ty... 372 e-122 gb|AAF18642.1|AC006228_13 (AC006228) F5J5.15 [Arabidopsis thaliana] 403 e-121 emb|CAB46045.1| (Z97342) retrotransposon like protein [Arabidops... 385 e-121 emb|CAB80961.1| (AL161545) retrotransposon like protein [Arabido... 385 e-121 dbj|BAA18885.1| (D90852) ORF_ID:o251#1~similar to [SwissProt Acc... 437 e-120 dbj|BAA15305.1| (D90800) ORF_ID:o309#9~similar to [SwissProt Acc... 437 e-119 dbj|BAA15283.1| (D90799) ORF_ID:o309#9~similar to [SwissProt Acc... 437 e-119 gb|AAC69377.1| (AC005398) putative retroelement pol polyprotein ... 289 e-118 emb|CAA32025.1| (X13777) ORF [Nicotiana tabacum] 393 e-118 dbj|BAA22288.1| (D85597) polyprotein [Oryza australiensis] 194 e-117 dbj|BAA11674.1| (D83003) ORF(AA 1-1338) [Nicotiana tabacum] 410 e-111 gb|AAF16534.1|AC013482_8 (AC013482) T26F17.17 [Arabidopsis thali... 218 e-111 emb|CAB75932.1| (AL138658) putative protein [Arabidopsis thaliana] 231 e-110 gb|AAD17414.1| (AC006248) copia-like retroelement pol polyprotei... 226 e-107 emb|CAA69272.1| (Y08010) lectin receptor kinase [Arabidopsis tha... 202 e-104 gb|AAD37020.1|AC007730_2 (AC007730) putative retroelement pol po... 326 e-104 dbj|BAB11200.1| (AB022213) copia-type polyprotein [Arabidopsis t... 240 e-104 gb|AAF25964.1|AC017118_1 (AC017118) F6N18.1 [Arabidopsis thaliana] 240 e-103 gb|AAG12968.1|AC055769_6 (AC055769) copia-type polyprotein, puta... 240 e-103 emb|CAA30503.1| (X07656) pol polypeptide (AA 1-982) [Drosophila ... 213 e-101 dbj|BAA90795.1| (AP001168) Similar to 22 kDa kafirin cluster; Ty... 280 4e-097 dbj|BAA24920.1| (AB011023) transposase [Burkholderia glumae] 355 5e-095 gb|AAC28238.1| (AF076274) contains similarity to reverse trancri... 179 3e-093 emb|CAB77896.1| (AL161499) putative transposon protein [Arabidop... 179 3e-093 gb|AAD13304.1| (AF119040) polyprotein [Lycopersicon esculentum] 295 2e-091 gb|AAD32898.1|AC007289_5 (AC007289) putative retroelement pol po... 173 3e-091 gb|AAG12877.1|AC069473_8 (AC069473) gypsy/Ty-3 retroelement poly... 281 3e-089 gb|AAD17356.1| (AF128395) contains similarity to retrovirus-rela... 334 1e-088 emb|CAB77942.1| (AL161507) putative reverse transcriptase [Arabi... 334 1e-088 gb|AAD19773.1| (AC006528) putative retroelement pol polyprotein ... 331 1e-087 dbj|BAA89466.1| (AB033235) gag-pol polyprotein [Oryza sativa] 314 3e-086 gb|AAF79348.1|AC007887_7 (AC007887) F15O4.13 [Arabidopsis thaliana] 319 9e-086 gb|AAF13073.1|AC011621_1 (AC011621) putative retroelement pol po... 261 3e-085 gb|AAD23690.1|AC006841_23 (AC006841) putative retroelement pol p... 298 2e-084 gb|AAB61111.1| (AC002062) Strong similarity to Zea mays retrotra... 173 5e-082 gb|AAD17358.1| (AF128395) contains similarity to reverse transcr... 310 2e-081 gb|AAD15321.1| (AC005142) putative reverse transcriptase [Arabid... 263 3e-081 emb|CAB77850.1| (AL161497) putative reverse transcriptase [Arabi... 263 3e-081 emb|CAA31653.1| (X13291) polyprotein [Arabidopsis thaliana] 296 2e-077 dbj|BAA16011.1| (D90851) ORF_ID:o373#10~similar to [PIR Accessio... 295 5e-077 dbj|BAA16003.1| (D90850) ORF_ID:o373#10~similar to [PIR Accessio... 295 5e-077 dbj|BAA15820.1| (D90838) ORF_ID:o348#3~similar to [PIR Accession... 295 5e-077 dbj|BAA15017.1| (D90779) ORF_ID:o267#8~similar to [PIR Accession... 295 5e-077 dbj|BAA15011.1| (D90778) ORF_ID:o267#8~similar to [PIR Accession... 295 5e-077 emb|CAA23539.1| (V00279) ORF 4 (AA 1-143) [Escherichia coli] 295 5e-077 gb|AAF65309.1|AF229252_1 (AF229252) reverse transcriptase [Picea... 220 1e-076 gb|AAF19226.1|AC007505_2 (AC007505) Highly similar to Ta1-3 poly... 294 1e-076 dbj|BAA88531.1| (AP000969) Similar to copia-type pol polyprotein... 163 3e-076 gb|AAC49502.1| (U68408) 5' end not determined experimentally [Ze... 170 4e-076 dbj|BAB03384.1| (AP002538) Similar to Zea mays retrotransposon O... 161 1e-075 gb|AAD20307.1| (AF105716) copia-type pol polyprotein [Zea mays] 170 5e-075 gb|AAG13508.1|AC068924_13 (AC068924) putative gag-pol polyprotei... 252 6e-073 gb|AAF18613.1|AC005171_1 (AC005171) putative retroelement integr... 202 2e-072 gb|AAF79797.1|AC020646_20 (AC020646) T32E20.30 [Arabidopsis thal... 235 3e-072 gb|AAC44032.1| (U19148) ORF2 [Agrobacterium tumefaciens] 276 4e-071 dbj|BAA75235.1| (AB014746) polyprotein [Hordeum vulgare] 258 6e-071 dbj|BAA75238.1| (AB014753) polyprotein [Morus bombycis] 254 8e-071 dbj|BAA75236.1| (AB014750) polyprotein [Nicotiana tabacum] 256 5e-070 dbj|BAA15304.1| (D90800) ORF_ID:o309#10~similar to [SwissProt Ac... 271 1e-069 dbj|BAA15282.1| (D90799) ORF_ID:o309#10~similar to [SwissProt Ac... 271 1e-069 gb|AAD32759.1|AC007662_4 (AC007662) putative retroelement pol po... 266 2e-069 emb|CAA39915.1| (X56563) putative coding sequence [Sinorhizobium... 268 1e-068 dbj|BAA78625.1| (AB028236) Pol (reverse transcriptase-RNase H-in... 268 1e-068 gb|AAD28752.1| (AF126537) putative transposase [Sinorhizobium me... 267 1e-068 gb|AAF18630.1|AC006228_1 (AC006228) F5J5.1 [Arabidopsis thaliana] 155 2e-068 emb|CAA37917.1| (X53973) reverse transcriptase [Arabidopsis thal... 205 2e-068 emb|CAA37920.1| (X53975) orf 3 [Arabidopsis thaliana] 208 2e-068 gb|AAD09019.1| (AF090446) copia protein [Zea mays] 160 4e-068 gb|AAA33420.1| (L35053) endonuclease [Pyricularia grisea] 248 6e-068 gb|AAC26250.1| (AF077408) contains similarity to reverse transcr... 193 6e-068 emb|CAB80804.1| (AL161498) putative retrotransposon protein [Ara... 193 6e-068 gb|AAD30014.1|AF118254_1 (AF118254) homolog of IS2 protein [Esch... 265 1e-067 gb|AAC33526.2| (AF030881) pol polyprotein [Takifugu rubripes] 252 9e-067 gb|AAC62132.1| (AC005169) copia-like retroelement pol polyprotei... 186 4e-066 dbj|BAA75237.1| (AB014751) polyprotein [Ipomoea nil] 240 6e-066 gb|AAC64917.1| (AF053008) gag-pol polyprotein [Glycine max] 192 1e-065 gb|AAD12998.1| (AF082134) pol polyprotein [Zea mays] 191 1e-065 gb|AAD12997.1| (AF082133) gag-pol polyprotein [Zea mays] 188 1e-064 gb|AAF36671.1|AF222049_2 (AF222049) pol protein [Drosophila mela... 180 3e-064 emb|CAA25702.1| (X01472) ORF 2, pot. reverse transcriptase [Dros... 180 3e-063 dbj|BAB01972.1| (AP002064) copia-like retrotransposable element ... 249 4e-063 gb|AAD25146.1|AC006420_1 (AC006420) putative retroelement pol po... 249 6e-063 gb|AAB18084.1| (U73857) ORF_o136 [Escherichia coli] 245 5e-062 gb|AAC77228.1| (AE000498) IS2 hypothetical protein [Escherichia ... 245 5e-062 gb|AAC74485.1| (AE000237) IS2 hypothetical protein [Escherichia ... 245 5e-062 gb|AAC73463.1| (AE000143) IS2 hypothetical protein [Escherichia ... 245 5e-062 gb|AAA97168.1| (U14003) IS2 ORF; alternate gene name yi21 [Esche... 245 5e-062 gb|AAA83043.1| (U28375) ORF_f136 [Escherichia coli] 245 5e-062 gb|AAA69212.1| (U28377) ORF_o136; orf1 of V00279 [Escherichia coli] 245 5e-062 dbj|BAA97891.1| (AP001918) 100 pct identical to pir:S56497[IS2 h... 245 5e-062 dbj|BAA16036.1| (D90852) ORF_ID:o250#9~similar to [PIR Accession... 245 5e-062 dbj|BAA16013.1| (D90851) ORF_ID:o373#12~similar to [PIR Accessio... 245 5e-062 dbj|BAA16005.1| (D90850) ORF_ID:o373#12~similar to [PIR Accessio... 245 5e-062 dbj|BAA15822.1| (D90838) ORF_ID:o348#5~similar to [PIR Accession... 245 5e-062 dbj|BAA15019.1| (D90779) ORF_ID:o267#10~similar to [PIR Accessio... 245 5e-062 dbj|BAA15013.1| (D90778) ORF_ID:o267#10~similar to [PIR Accessio... 245 5e-062 dbj|BAA96887.1| (AB018112) copia-like retroelement pol polyprote... 245 7e-062 gb|AAC26251.1| (AF077408) contains similarity to reverse transcr... 244 1e-061 emb|CAB80807.1| (AL161498) putative transposon protein [Arabidop... 244 1e-061 gb|AAC75058.1| (AE000291) IS2 hypothetical protein [Escherichia ... 244 2e-061 emb|CAA80824.1| (Z24451) pol protein [Drosophila ananassae] 176 1e-060 gb|AAD39272.1|AC007203_4 (AC007203) Similar to retrotransposon p... 180 2e-060 gb|AAF48838.2| (AE003508) CG15054 gene product [Drosophila melan... 180 4e-060 gb|AAD10296.1| (U82084) unknown [bacteriophage SfX] 239 4e-060 gb|AAF70033.1|AF250878_194 (AF250878) IS2 hypothetical orf [Salm... 239 4e-060 gb|AAD44740.1|AF141323_11 (AF141323) TnpG [Shigella flexneri] 239 4e-060 gb|AAC76080.1| (AE000386) IS2 hypothetical protein [Escherichia ... 239 4e-060 gb|AAC75900.1| (AE000369) IS2 hypothetical protein [Escherichia ... 239 4e-060 emb|CAA23542.1| (V00279) ORF 1 (AA 1-121) [Escherichia coli] 239 4e-060 gb|AAF21678.1|AF051915_2 (AF051915) pol polyprotein [Cladosporiu... 226 5e-060 emb|CAA77891.1| (Z11866) Reverse Transcriptase [Cladosporium ful... 225 5e-060 gb|AAD36943.1|AF069441_3 (AF069441) putative polyprotein [Arabid... 236 3e-059 emb|CAB77906.1| (AL161500) putative polyprotein [Arabidopsis tha... 236 3e-059 emb|CAA65152.1| (X95908) orf [Drosophila melanogaster] 192 1e-058 emb|CAB57796.1| (X03431) ORF2 [Drosophila melanogaster] 176 3e-058 gb|AAD17409.1| (AC006248) putative retroelement pol polyprotein ... 233 3e-058 gb|AAD32906.1|AC007584_4 (AC007584) putative retroelement pol po... 233 3e-058 dbj|BAB07955.1| (AP002524) putative retrovirous-related pol poly... 198 2e-057 emb|CAA39913.1| (X56562) putative coding sequence [Agrobacterium... 228 8e-057 gb|AAF48015.1| (AE003485) CG2485 gene product [Drosophila melano... 172 9e-057 dbj|BAA88206.1| (AP000837) Similar to Oryza australiensis retrot... 196 1e-056 dbj|BAA88170.1| (AP000836) Similar to Oryza australiensis retrot... 196 1e-056 emb|CAA08807.1| (AJ009736) Pol protein [Drosophila melanogaster] 161 3e-056 dbj|BAA88542.1| (AP000969) ESTs D22114(C10364), AU076106(E20423)... 196 4e-056 dbj|BAB03249.1| (AB046118) polyprotein [Oryza sativa] 196 4e-056 emb|CAA04050.1| (AJ000387) protease [Drosophila melanogaster] 168 5e-056 dbj|BAA22516.1| (D90852) ORF_ID:o250#12~similar to [SwissProt Ac... 226 5e-056 gb|AAG13538.1|AC023240_11 (AC023240) putative gag-pol polyprotei... 195 1e-055 gb|AAA50456.1| (U15406) gag, pol and env protein precursor [Caen... 164 2e-055 gb|AAD25646.1|AC007109_4 (AC007109) putative retroelement pol po... 177 2e-055 gb|AAD39271.1|AC007203_3 (AC007203) Similar to reverse-transcri... 171 2e-055 gb|AAA92249.1| (M32662) ORF B (bases 1850-5560) first start codo... 159 1e-054 gb|AAC33318.1| (AF056940) pol polyprotein [Drosophila virilis] 157 2e-054 gb|AAD24647.1|AC006220_3 (AC006220) putative retroelement pol po... 219 5e-054 dbj|BAB10503.1| (AB013391) retroelement pol polyprotein-like [Ar... 178 1e-053 dbj|BAA92406.1| (AP001366) Similar to Arabidopsis thaliana chrom... 217 2e-053 gb|AAG13423.1|AC051634_4 (AC051634) putative plant disease resis... 216 3e-053 dbj|BAA95819.1| (AP002069) Similar to Zea mays chromosome 4 22 k... 169 1e-051 emb|CAB10225.1| (Z97336) retrovirus-related like polyprotein [Ar... 156 1e-051 emb|CAB78488.1| (AL161539) retrovirus-related like polyprotein [... 156 1e-051 dbj|BAA92703.1| (AB036885) reverse transcriptase [Tricholoma mag... 153 2e-051 emb|CAA86713.1| (Z46728) YI9910.15, incomplete TY3-2 orfB, len: ... 210 2e-051 gb|AAA35184.1| (M23367) has homology to retroviral pol genes; OR... 210 2e-051 gb|AAA98435.1| (M34549) POL3 [Saccharomyces cerevisiae] 210 3e-051 emb|CAA97117.1| (Z72895) TY3B [Saccharomyces cerevisiae] 210 3e-051 emb|CAA97115.1| (Z72894) TY3B [Saccharomyces cerevisiae] 210 3e-051 dbj|BAB10837.1| (AB016892) retroelement pol polyprotein-like [Ar... 157 4e-051 dbj|BAA16012.1| (D90851) ORF_ID:o373#11~similar to [PIR Accessio... 209 6e-051 dbj|BAA16004.1| (D90850) ORF_ID:o373#11~similar to [PIR Accessio... 209 6e-051 dbj|BAA15821.1| (D90838) ORF_ID:o348#4~similar to [PIR Accession... 209 6e-051 dbj|BAA15018.1| (D90779) ORF_ID:o267#9~similar to [PIR Accession... 209 6e-051 dbj|BAA15012.1| (D90778) ORF_ID:o267#9~similar to [PIR Accession... 209 6e-051 emb|CAA23540.1| (V00279) ORF 3 (AA 1-97) [Escherichia coli] 209 6e-051 emb|CAA72989.1| (Y12321) open reading frame 1 [Brassica oleracea] 187 1e-050 gb|AAD19784.1| (AC006528) putative retroelement pol polyprotein ... 161 1e-050 emb|CAB79159.1| (AL161556) LTR retrotransposon like protein [Ara... 173 1e-050 emb|CAA18107.1| (AL022140) LTR retrotransposon like protein [Ara... 173 1e-050 dbj|BAB10743.1| (AB010695) retroelement pol polyprotein-like [Ar... 171 2e-050 dbj|BAA81872.1| (AB026295) EST D24315(R1718) corresponds to a re... 206 3e-050 gb|AAG12110.1|AC079730_6 (AC079730) hypothetical protein; 41436-... 167 3e-050 gb|AAD29756.1|AF076243_3 (AF076243) putative transposon protein ... 191 3e-050 emb|CAB77912.1| (AL161500) putative transposon protein [Arabidop... 191 3e-050 gb|AAD26943.1|AC007134_1 (AC007134) putative retroelement pol po... 194 5e-050 emb|CAB11682.1| (Z98978) retrotransposable element tf2 155 kd pr... 202 2e-049 emb|CAA93236.1| (Z69240) retrotransposon Tf2p [Schizosaccharomyc... 202 2e-049 emb|CAB83007.1| (AL162531) retrotransposble element; tf2 type tr... 202 2e-049 emb|CAB57422.1| (AL121764) retrotransposable element tf2 155 kd ... 202 2e-049 emb|CAB42363.1| (AL049769) retrotransposable element tf2 155 kd ... 202 2e-049 emb|CAB60245.1| (AL023518) TF2 type transposable element [Schizo... 202 2e-049 gb|AAA91215.1| (L10324) protease, reverse transcriptase, RNAse H... 202 2e-049 emb|CAB58169.1| (AL035248) tf2-type transposon [Schizosaccharomy... 202 2e-049 dbj|BAA97287.1| (AB018120) retroelement pol polyprotein-like [Ar... 154 2e-049 gb|AAC67205.1| (AC005171) putative retroelement pol polyprotein ... 152 2e-049 emb|CAA27750.1| (X04132) ORF 4 (RNA2) [Drosophila melanogaster] 156 2e-049 gb|AAD23883.1|AC006954_4 (AC006954) putative retroelement pol po... 156 3e-049 gb|AAG13430.1|AC051634_11 (AC051634) putative plant disease resi... 166 3e-049 gb|AAB87099.1| (AC002391) putative retroelement pol polyprotein ... 167 3e-049 emb|CAB61532.1| (AL021815) retrotransposable element; tf2-type t... 202 5e-049 emb|CAB64236.1| (AL035675) retrotransposable element; tf2-type t... 202 5e-049 gb|AAA35339.1| (M38526) Tf1 protein [Schizosaccharomyces pombe] 200 6e-049 gb|AAC95173.1| (AC005970) putative retroelement pol polyprotein ... 201 1e-048 gb|AAA28035.1| (L23646) homology with S. pombe protease; putativ... 141 2e-048 gb|AAD41979.1|AC006438_11 (AC006438) putative retroelement pol p... 176 3e-048 gb|AAF24529.1|AC007534_10 (AC007534) F7F22.15 [Arabidopsis thali... 139 5e-048 gb|AAF29407.1|AC022354_6 (AC022354) putative retroelement pol po... 178 7e-048 gb|AAF79879.1|AC000348_32 (AC000348) T7N9.5 [Arabidopsis thaliana] 164 2e-047 emb|CAB39733.1| (AJ133521) protease, reverse transcriptase, ribo... 145 2e-047 emb|CAB42059.1| (AJ005761) Tpv2-1c [Phaseolus vulgaris] 125 2e-047 gb|AAB70784.1| (AF015276) protease/reverse transcriptase [Volvox... 162 3e-047 emb|CAA32198.1| (X14037) polyprotein [Drosophila melanogaster] 151 3e-047 dbj|BAA88175.1| (AP000836) Similar to putative polyprotein (AC00... 196 3e-047 dbj|BAB10790.1| (AB028613) retroelement pol polyprotein-like [Ar... 137 3e-047 gb|AAC33963.1| (AF080118) contains similarity to reverse transcr... 166 4e-047 dbj|BAA97099.1| (AP002461) retroelement pol polyprotein-like [Ar... 148 4e-047 dbj|BAB01983.1| (AP002459) retroelement pol polyprotein-like [Ar... 183 6e-047 gb|AAG10817.1|AC011808_5 (AC011808) Putative retroelement polypr... 163 7e-047 dbj|BAA74713.1| (AB014676) copia-like retrotransposable element ... 194 1e-046 gb|AAF24531.1|AC007534_12 (AC007534) F7F22.17 [Arabidopsis thali... 160 3e-046 gb|AAG09097.1|AC009323_8 (AC009323) Putative retroelement polypr... 168 3e-046 emb|CAB81200.1| (AL161518) putative retrotransposon polyprotein ... 166 5e-046 emb|CAB40067.1| (AL049525) putative retrotransposon polyprotein ... 166 5e-046 gb|AAD29774.1|AF074021_6 (AF074021) putative polyprotein [Arabid... 125 6e-046 emb|CAB80825.1| (AL161501) putative polyprotein [Arabidopsis tha... 125 6e-046 emb|CAA26447.1| (X02600) unidentified open reading frame I (1289... 187 8e-046 gb|AAG10812.1|AC018460_6 (AC018460) Putative retroelement polypr... 192 8e-046 emb|CAA26444.1| (X02599) 31 KD polyprotein [Drosophila melanogas... 187 1e-045 gb|AAA74497.1| (M11240) unknown protein [Drosophila melanogaster] 187 1e-045 dbj|BAA01703.1| (D10880) ORF [Drosophila simulans] 187 1e-045 emb|CAA28054.1| (X04456) ORF [Drosophila melanogaster] 187 1e-045 gb|AAA88791.1| (L34658) pol polyprotein [Fusarium oxysporum] 191 1e-045 gb|AAD24600.1|AC005825_7 (AC005825) putative retroelement pol po... 152 4e-045 dbj|BAB08717.1| (AB015477) contains similarity to retroelement p... 151 5e-045 dbj|BAA22787.1| (AB007466) reverse transcriptase-like protein [V... 139 9e-045 dbj|BAA92704.1| (AB036886) reverse transcriptase [Tricholoma bak... 187 2e-044 emb|CAA77351.1| (Z00044) PSI P700 apoprotein A2 [Nicotiana tabacum] 138 3e-044 emb|CAB88725.1| (AJ400848) PSI P700 apoprotein A2 [Spinacia oler... 136 1e-043 emb|CAA58958.1| (X84153) photosystem I subunit [Antirrhinum majus] 136 2e-043 emb|CAB10526.1| (Z97343) retrotransposon like protein [Arabidops... 152 3e-043 emb|CAB78748.1| (AL161546) retrotransposon like protein [Arabido... 152 3e-043 dbj|BAB02630.1| (AP002054) retroelement pol polyprotein-like [Ar... 159 7e-043 emb|CAA27831.1| (X04282) unidentified reading frame 2 (195 aa) [... 182 7e-043 gb|AAD22506.1|AC007045_6 (AC007045) putative retroelement pol po... 182 9e-043 gb|AAD23679.1|AC006841_8 (AC006841) putative retroelement pol po... 156 1e-042 dbj|BAB02140.1| (AP000411) contains similarity to reverse transc... 181 1e-042 gb|AAD17352.1| (AF128395) contains similarity to retrovirus-rela... 155 2e-042 emb|CAB77940.1| (AL161507) putative polyprotein [Arabidopsis tha... 155 2e-042 gb|AAB82754.1| (U72725) retrofit [Oryza longistaminata] 180 2e-042 gb|AAC34605.1| (AF072638) reverse transcriptase [Lycopersicon es... 180 2e-042 gb|AAD21687.1| (AC004793) Strong similarity to gi|3600044 T12H20... 180 2e-042 gb|AAD04177.1| (AF110183) putative integrase [Oryza sativa] 180 3e-042 emb|CAB67138.1| (AJ271079) PSI P700 apoprotein A2 [Oenothera ela... 132 3e-042 emb|CAA36615.1| (X52387) ORF3 [Solanum tuberosum] 180 4e-042 gb|AAA74498.1| (M11240) unknown protein [Drosophila melanogaster] 170 4e-042 dbj|BAA84384.1| (AP000423) PSI P700 apoprotein A2 [Arabidopsis t... 132 4e-042 emb|CAA60285.1| (X86563) PSI P700 apoprotein A2 [Zea mays] 131 1e-041 gb|AAA84486.1| (M11203) P700 chlorophyll a-protein PSI-A2 [Zea m... 131 1e-041 emb|CAA33995.1| (X15901) PSI P700 apoprotein A2 [Oryza sativa] 131 1e-041 gb|AAC12735.1| (AF053721) putative retrovirus-related polyprotei... 177 2e-041 dbj|BAA83447.1| (AB013671) photosystem I P700 apoprotein A2 [Sph... 128 4e-041 gb|AAG21572.1|AC027036_2 (AC027036) polyprotein, putative; 23912... 147 1e-040 dbj|BAA78425.1| (AB021265) polyprotein [Arabidopsis thaliana] 142 1e-040 dbj|BAA78423.1| (AB021263) polyprotein [Arabidopsis thaliana] 147 1e-040 emb|CAB81478.1| (AL161573) putative protein [Arabidopsis thaliana] 174 2e-040 emb|CAB43904.1| (AL078469) putative protein [Arabidopsis thaliana] 174 2e-040 gb|AAG12494.1|AC074283_5 (AC074283) Polyprotein [Oryza sativa] 156 2e-040 dbj|BAA04420.1| (D17510) PSI P700 apoprotein A2 [Pinus thunbergii] 130 2e-040 dbj|BAA89272.1| (AB025309) Pol [Alternaria alternata] 173 4e-040 gb|AAD43604.1|AC005698_3 (AC005698) T3P18.3 [Arabidopsis thaliana] 152 5e-040 gb|AAC61290.1| (AC005396) putative retroelement pol polyprotein ... 172 6e-040 emb|CAA73301.1| (Y12762) hypothetical protein [Zea mays] 172 6e-040 gb|AAF99727.1|AC004557_6 (AC004557) F17L21.7 [Arabidopsis thaliana] 148 1e-039 gb|AAD15534.1| (AC006217) putative retroelement pol polyprotein ... 171 2e-039 dbj|BAA83457.1| (AB013681) photosystem I P700 apoprotein A2 [Adi... 126 2e-039 gb|AAA33448.1| (M94481) reverse transcriptase [Zea mays] 150 3e-039 gb|AAF69161.1|AC007915_13 (AC007915) F27F5.19 [Arabidopsis thali... 145 3e-039 emb|CAA28084.1| (X04465) psaB [Marchantia polymorpha] 121 5e-039 gb|AAA21442.1| (M77661) putative pol polyprotein [Pyricularia gr... 169 5e-039 gb|AAF63110.1|AC006423_11 (AC006423) putative retroelement pol p... 169 5e-039 emb|CAA29004.1| (X05423) P700 chlorophyll a-apoproteins 82 KD p... 120 1e-038 emb|CAB53562.1| (AJ006561) reverse transcriptase [Anopheles merus] 168 1e-038 emb|CAB46043.1| (Z97342) retrotransposon like protein [Arabidops... 155 1e-038 emb|CAB80958.1| (AL161545) retrotransposon like protein [Arabido... 155 1e-038 emb|CAA49283.1| (X69552) gag,protease,endonuclease, reverse tran... 160 1e-038 emb|CAB79271.1| (AL161558) putative protein [Arabidopsis thaliana] 147 2e-038 emb|CAA18463.1| (AL022347) putative protein [Arabidopsis thaliana] 147 2e-038 gb|AAF18626.1|AC006250_1 (AC006250) putative retroelement pol po... 167 3e-038 gb|AAC62795.1| (AF096371) contains similarity to retroviral aspa... 104 3e-038 dbj|BAA77816.1| (AB027513) polyprotein [Tricholoma matsutake] 161 3e-038 gb|AAD09018.1| (AF090446) polyprotein [Zea mays] 166 3e-038 dbj|BAA83452.1| (AB013676) photosystem I P700 apoprotein A2 [Hap... 121 4e-038 dbj|BAA16037.1| (D90852) ORF_ID:o250#11~similar to [SwissProt Ac... 166 5e-038 gb|AAF02855.1|AC009324_4 (AC009324) Similar to retrotransposon p... 162 5e-038 gb|AAG13591.1|AC051633_7 (AC051633) putative gag/pol polyprotein... 164 5e-038 emb|CAA81643.1| (Z27119) blastopia polyprotein [Drosophila melan... 141 5e-038 gb|AAC79110.1| (AF069442) putative polyprotein of LTR transposon... 156 7e-038 emb|CAB77781.1| (AL161495) putative polyprotein of LTR transposo... 156 7e-038 dbj|BAA78424.1| (AB021264) polyprotein [Arabidopsis thaliana] 156 7e-038 gb|AAC28743.1| (U60529) pol-like protein [Ceratitis capitata] 165 8e-038 gb|AAA98402.1| (M35123) heat-stable toxin II [Transposon Tn4521] 165 8e-038 dbj|BAB02145.1| (AP000411) copia-like retroelement pol polyprote... 124 1e-037 gb|AAA57005.1| (U12626) copia-like retrotransposon Hopscotch pol... 151 2e-037 gb|AAD39270.1|AC007203_2 (AC007203) Similar to reverse trancript... 128 2e-037 dbj|BAA92706.1| (AB036888) reverse transcriptase [Tricholoma sej... 133 2e-037 gb|AAF43834.1|AF166114_46 (AF166114) P700 apoprotein A2 of photo... 120 3e-037 dbj|BAA78426.1| (AB021266) polyprotein [Arabidopsis thaliana] 156 4e-037 gb|AAD17351.1| (AF128395) contains similarity to retrovirus-rela... 162 5e-037 emb|CAB77944.1| (AL161508) putative polyprotein [Arabidopsis tha... 162 5e-037 gb|AAD22155.1|AF061282_8 (AF061282) polyprotein [Sorghum bicolor] 99 7e-037 gb|AAB51275.1| (U90320) reverse transcriptase, gag, polyprotein ... 145 9e-037 dbj|BAA97087.1| (AP002459) copia-type pol polyprotein-like [Arab... 134 2e-036 gb|AAA81182.1| (U30821) PsaB subunit of photosystem I reaction c... 119 2e-036 gb|AAF79259.1|AC023279_8 (AC023279) F12K21.14 [Arabidopsis thali... 96 2e-036 gb|AAC35532.1| (AF080119) contains similarity to proteases [Arab... 160 3e-036 emb|CAB81170.1| (AL161518) retrotransposon like protein [Arabido... 160 3e-036 emb|CAB40035.1| (AL049523) retrotransposon like protein [Arabido... 160 3e-036 emb|CAA37919.1| (X53975) orf 2 [Arabidopsis thaliana] 160 3e-036 dbj|BAA78427.1| (AB021267) polyprotein [Arabidopsis thaliana] 160 3e-036 gb|AAD54855.1|AF137379_78 (AF137379) P700 apoprotein A2 of photo... 116 4e-036 dbj|BAB11447.1| (AB010070) polyprotein-like [Arabidopsis thaliana] 134 5e-036 gb|AAF00146.1|AF149813_2 (AF149813) retrotransposon del1-46 homo... 146 5e-036 emb|CAB79576.1| (AL161566) putative protein [Arabidopsis thaliana] 159 8e-036 emb|CAA19715.1| (AL030978) putative protein [Arabidopsis thaliana] 159 8e-036 gb|AAA88634.1| (M18165) chlorophyll a/b apoprotein [Synechococcu... 116 8e-036 gb|AAF67380.1| (AF262042) Hypothetical protein T15F17.l [Arabido... 134 1e-035 emb|CAA91749.1| (Z67753) PSI, P700 apoprotein A2 [Odontella sine... 123 1e-035 emb|CAA72990.1| (Y12321) open reading frame 2 [Brassica oleracea] 90 1e-035 gb|AAC02669.1| (AF039373) polyprotein [Arabidopsis thaliana] 157 2e-035 gb|AAC02666.1| (AF039372) polyprotein [Arabidopsis thaliana] 157 2e-035 dbj|BAB10876.1| (AB010693) polyprotein [Arabidopsis thaliana] 152 2e-035 emb|CAA16691.1| (AL021684) retrotransposon - like protein [Arabi... 90 2e-035 dbj|BAB10674.1| (AB010075) copia-like retroelement pol polyprote... 90 2e-035 gb|AAC02664.1| (AF039371) polyprotein [Arabidopsis thaliana] 157 2e-035 gb|AAC67200.1| (AC005171) putative retroelement pol polyprotein ... 157 3e-035 gb|AAC02672.1| (AF039376) polyprotein [Arabidopsis arenosa] 157 3e-035 gb|AAC08171.1| (U38804) Photosystem I p700 chlorophyll A apoprot... 115 9e-035 gb|AAF32440.1| (AC022288) hypothetical protein; 74056-75837 [Ara... 121 9e-035 gb|AAF97297.1|AC010164_19 (AC010164) Hypothetical protein [Arabi... 99 9e-035 gb|AAC47271.1| (U09586) protease, reverse transcriptase and RNas... 116 2e-034 gb|AAC98469.1| (AC005561) putative retroelement pol polyprotein ... 132 2e-034 gb|AAG12922.1|AC022456_7 (AC022456) polyprotein, putative; 77260... 109 3e-034 gb|AAD41974.1|AC006438_6 (AC006438) putative retroelement pol po... 143 3e-034 emb|CAB10380.1| (Z97340) reverse transcriptase like protein [Ara... 153 4e-034 emb|CAB78643.1| (AL161543) reverse transcriptase like protein [A... 153 4e-034 dbj|BAB08213.2| (AP002539) Similar to Arabidopsis thaliana chrom... 131 4e-034 dbj|BAA96774.2| (AP002521) Similar to Arabidopsis thaliana chrom... 131 4e-034 gb|AAF12881.1|AF022186_3 (AF022186) unknown; Photosystem I p700 ... 118 4e-034 gb|AAD14478.1| (AC005966) Strong similarity to gb|AF039376 Evelk... 138 6e-034 gb|AAC35698.1| (AF041468) PSI P700 apoprotein A2 [Guillardia theta] 108 1e-033 emb|CAA36616.1| (X52387) ORF4 [Solanum tuberosum] 101 1e-033 gb|AAD29768.1|AF076243_15 (AF076243) putative polyprotein [Arabi... 136 1e-033 emb|CAB77909.1| (AL161500) putative polyprotein [Arabidopsis tha... 136 1e-033 gb|AAA84149.1| (M90641) P700 chlorophyll a-apoprotein A2 [Chlamy... 112 1e-033 emb|CAB64209.1| (AJ133190) photosystem I subunit PsaB [Synechoco... 109 3e-033 emb|CAA29287.1| (X05848) P700 chlorophyll a-apoprotein A2 [Chlam... 112 3e-033 gb|AAF97299.1|AC007843_2 (AC007843) Similar to copia-type revers... 146 4e-033 emb|CAA77911.1| (Z11874) PSII P700 chl. a apoprotein [Euglena gr... 111 5e-033 emb|CAA50094.1| (X70810) PSI P700 apoprotein, subunit 1b [Euglen... 111 5e-033 gb|AAA84452.1| (M37526) alpha-apoprotein [Euglena gracilis] 111 5e-033 dbj|BAA87949.1| (AB028223) retrotransposon homolog [Arabidopsis ... 147 1e-032 gb|AAC02631.1| (U19263) ORF [Saccharomyces paradoxus] 137 2e-032 gb|AAF67366.1| (AF262041) Hypothetical protein T32B20.i [Arabido... 125 2e-032 emb|CAA65970.1| (X97304) ORF V [Strawberry vein banding virus] 116 2e-032 emb|CAA12930.1| (AJ228325) reverse transcriptase [Ginkgo biloba] 147 2e-032 gb|AAD27902.1|AC006267_7 (AC006267) putative polyprotein [Arabid... 145 2e-032 emb|CAB81146.1| (AL161510) putative polyprotein [Arabidopsis tha... 145 2e-032 gb|AAF79483.1|AC022492_27 (AC022492) F1L3.20 [Arabidopsis thaliana] 147 3e-032 gb|AAF79683.1|AC022314_24 (AC022314) F9C16.17 [Arabidopsis thali... 103 3e-032 emb|CAB78980.1| (AL161551) putative LTR retrotransposon (fragmen... 87 4e-032 emb|CAA19695.1| (AL024486) putative LTR retrotransposon (fragmen... 87 4e-032 dbj|BAA57928.1| (AB001684) P700 apoprotein subunit Ib [Chlorella... 107 5e-032 gb|AAC18777.1| (U22103) gag-protease polyprotein [Glycine max] 145 1e-031 emb|CAA37918.1| (X53975) orf 1 [Arabidopsis thaliana] 144 2e-031 gb|AAF18651.1|AC006570_1 (AC006570) putative retroelement pol po... 126 2e-031 gb|AAG12528.1|AC015446_9 (AC015446) Hypothetical Protein [Arabid... 83 3e-031 gb|AAF63122.1|AC009526_7 (AC009526) Hypothetical protein [Arabid... 131 3e-031 gb|AAC28230.1| (AF076274) contains similarity to reverse transcr... 123 3e-031 emb|CAB77897.1| (AL161499) putative reverse transcriptase [Arabi... 123 3e-031 dbj|BAA92424.1| (AB039862) pol (reverse transcriptase-RNase H) [... 143 3e-031 gb|AAF69172.1|AC007915_24 (AC007915) F27F5.11 [Arabidopsis thali... 143 5e-031 gb|AAC28237.1| (AF076274) contains similarity to reverse trancri... 141 1e-030 emb|CAB77891.1| (AL161499) putative transposon protein [Arabidop... 141 1e-030 gb|AAF63111.1|AC006423_12 (AC006423) Similar to gag-pol polyprot... 88 5e-030 emb|CAB79575.1| (AL161566) putative protein [Arabidopsis thaliana] 128 7e-030 emb|CAA19714.1| (AL030978) putative protein [Arabidopsis thaliana] 128 7e-030 emb|CAA39967.1| (X56645) ORF 2 [Drosophila virilis] 138 1e-029 gb|AAD22507.1|AC007045_7 (AC007045) putative retroelement pol po... 123 3e-029 dbj|BAA92425.1| (AB039863) pol (reverse transcriptase-RNase H) [... 135 3e-029 gb|AAA28600.1| (M38438) reverse transcriptase endonuclease [Dros... 136 5e-029 gb|AAB50148.1| (U89994) reverse transcriptase polyprotein [Droso... 136 6e-029 gb|AAF79618.1|AC027665_19 (AC027665) F5M15.26 [Arabidopsis thali... 127 7e-029 gb|AAC82604.1| (AF033821) Prgag-pol [Drosophila melanogaster] 135 8e-029 gb|AAA70219.1| (M12927) unknown protein [Drosophila melanogaster] 135 8e-029 emb|CAA51084.1| (X72390) ORF2 [Drosophila subobscura] 135 8e-029 emb|CAA27371.1| (X03734) reverse transcriptase-like enzyme (930 ... 135 1e-028 dbj|BAA24352.1| (AB000279) Pol-like peptide [Alternaria alternata] 133 3e-028 gb|AAA18489.1| (L26326) PsaB [Anabaena variabilis] 110 4e-028 gb|AAC12867.1| (AF038558) photosystem I PsaB [Fischerella PCC7605] 105 6e-028 gb|AAD15376.1| (AC006136) putative retroelement pol polyprotein ... 132 7e-028 gb|AAD22283.1|AC006920_7 (AC006920) putative retroelement pol po... 120 8e-028 gb|AAF79809.1|AC020646_32 (AC020646) T32E20.9 [Arabidopsis thali... 131 2e-027 gb|AAD25830.1|AC006951_9 (AC006951) putative retroelement pol po... 130 3e-027 gb|AAD19780.1| (AC006528) putative retroelement pol polyprotein ... 103 3e-027 gb|AAC24836.2| (AF065434) polyprotein [Candida albicans] 130 4e-027 gb|AAF63114.1|AC006423_15 (AC006423) Hypothetical protein [Arabi... 128 1e-026 emb|CAA45305.1| (X63768) photosystem I subunit Ib [Synechococcus... 106 2e-026 dbj|BAA01760.1| (D10986) photosystem I core protein B [Synechoco... 106 2e-026 gb|AAD28751.1|AF126537_1 (AF126537) putative transposase [Sinorh... 127 2e-026 emb|CAA39914.1| (X56563) putative coding sequence [Sinorhizobium... 127 2e-026 gb|AAC44031.1| (U19148) ORF1 [Agrobacterium tumefaciens] 127 3e-026 dbj|BAA92689.1| (AB032718) protease and reverse transcriptase-li... 124 2e-025 gb|AAD17357.1| (AF128395) contains similarity to retrovirus-rela... 123 3e-025 emb|CAB77943.1| (AL161507) putative transposon protein [Arabidop... 123 3e-025 emb|CAB10381.1| (Z97340) retrotransposon like protein [Arabidops... 85 8e-025 emb|CAB78644.1| (AL161543) retrotransposon like protein [Arabido... 85 8e-025 dbj|BAA84458.1| (AB030283) GAG-POL precursor [Oryza sativa] 121 2e-024 emb|CAB64201.1| (AJ133191) photosystem I subunit PsaB [Prochloro... 90 3e-024 gb|AAD15474.1| (AC006067) putative retroelement pol polyprotein ... 119 5e-024 gb|AAB18334.1| (U75247) reverse transcriptase [Gossypium barbade... 119 7e-024 gb|AAD28680.1|AC007187_4 (AC007187) putative retroelement pol po... 119 7e-024 dbj|BAA92705.1| (AB036887) reverse transcriptase [Tricholoma por... 118 1e-023 emb|CAB64199.1| (AJ133192) photosystem I subunit PsaB [Prochloro... 90 2e-023 gb|AAC74649.1| (AE000253) orf, hypothetical protein [Escherichia... 118 2e-023 emb|CAA30353.1| (X07465) put. ORF6 (35kD) [Escherichia coli] 118 2e-023 dbj|BAA15303.1| (D90800) ORF_ID:o309#8~similar to [SwissProt Acc... 118 2e-023 dbj|BAA15281.1| (D90799) ORF_ID:o309#8~similar to [SwissProt Acc... 118 2e-023 dbj|BAA84805.1| (AP000559) Similar to ORF3 protein - rice tungro... 117 2e-023 emb|CAA29429.1| (X06034) reverse transcriptose-like protein (AA ... 117 3e-023 gb|AAD29754.1|AF076243_1 (AF076243) putative transposon protein ... 117 3e-023 emb|CAB77910.1| (AL161500) putative transposon protein [Arabidop... 117 3e-023 gb|AAB03327.1| (U59751) ORF 3 [Cassava vein mosaic virus] 109 5e-023 gb|AAA79873.1| (U20341) ORF III [Cassava vein mosaic virus] 109 5e-023 gb|AAG15480.1| (AF259976) polyprotein [Oryza sativa subsp. indica] 116 6e-023 gb|AAD27571.1|AF114171_12 (AF114171) polyprotein [Sorghum bicolor] 115 8e-023 gb|AAD19359.1| (AF098806) polyprotein [Sorghum bicolor] 115 8e-023 gb|AAG12527.1|AC015446_8 (AC015446) Hypothetical Protein [Arabid... 115 8e-023 dbj|BAB03352.1| (AP002486) Similar to Oryza sativa gypsy-type re... 115 1e-022 gb|AAC95170.1| (AC005970) copia-like retroelement pol polyprotei... 115 1e-022 dbj|BAB11308.1| (AB026651) copia-like retroelement pol polyprote... 114 2e-022 gb|AAF18643.1|AC006228_14 (AC006228) F5J5.14 [Arabidopsis thaliana] 113 3e-022 gb|AAD19756.1| (AC006413) putative Ty3-gypsy-like retroelement p... 113 4e-022 emb|CAB53471.1| (AJ243733) polymerase polyprotein [Lampetra fluv... 113 4e-022 gb|AAD11615.1| (AF049110) prpol [Zea mays] 107 6e-022 dbj|BAA92707.1| (AB036889) reverse transcriptase [Tricholoma ful... 110 9e-022 emb|CAB91877.1| (AJ277966) polyprotein [Phaeosphaeria nodorum] 102 1e-021 emb|CAA41630.1| (X58825) P700 apoprotein subunit Ib (PSA-B) [Sy... 110 3e-021 dbj|BAA17438.1| (D90906) P700 apoprotein subunit Ib [Synechocyst... 110 3e-021 gb|AAF79665.1|AC022314_6 (AC022314) F9C16.13 [Arabidopsis thaliana] 110 3e-021 emb|CAA39912.1| (X56562) putative coding sequence [Agrobacterium... 109 5e-021 gb|AAG12503.1|AC074283_14 (AC074283) Opie-2-like polyprotein [Or... 108 5e-021 gb|AAA03171.1| (L14546) polyprotein [Cacao swollen shoot virus] 102 7e-021 gb|AAD20101.1| (AC006304) putative retroelement pol polyprotein ... 109 8e-021 emb|CAA69271.1| (Y08010) lectin receptor kinase [Arabidopsis tha... 108 9e-021 gb|AAA62375.1| (M90542) reverse transcriptase [Cauliflower mosai... 108 1e-020 emb|CAA55974.1| (X79465) ORF V [Cauliflower mosaic virus] 108 1e-020 emb|CAA23460.1| (V00141) reading frame (V) [Cauliflower mosaic v... 108 1e-020 gb|AAA21736.1| (M90543) reverse transcriptase [Cauliflower mosai... 108 2e-020 gb|AAD19758.1| (AC006413) putative Ty3-gypsy-like retroelement p... 108 2e-020 gb|AAB71256.1| (AF026205) contains similarity to Pfam domains PF... 107 3e-020 gb|AAD37341.1|AF140604_5 (AF140604) reverse transcriptase [Cauli... 106 5e-020 gb|AAD29770.1|AF074021_2 (AF074021) putative transposon protein ... 106 7e-020 emb|CAB80821.1| (AL161501) putative transposon protein [Arabidop... 106 7e-020 gb|AAA46358.1| (M90541) reverse transcriptase [Cauliflower mosai... 106 7e-020 gb|AAF98443.1|AC021044_22 (AC021044) Hypothetical protein [Arabi... 105 9e-020 dbj|BAB09070.1| (AB025628) contains similarity to retroelement p... 65 1e-019 gb|AAB42240.1| (U88169) similar to retrovirus-related POL polypr... 104 2e-019 dbj|BAB02143.1| (AP000411) retroelement pol polyprotein-like [Ar... 104 2e-019 emb|CAA29527.1| (X06166) ORF V (AA 1-666) [Figwort mosaic virus] 83 2e-019 gb|AAD48069.1|AF160181_1 (AF160181) contains similarity to Pfam ... 104 3e-019 emb|CAB81130.1| (AL161506) contains similarity to Pfam family PF... 104 3e-019 dbj|BAA83435.1| (AB013659) photosystem I P700 apoprotein A2 [Col... 104 3e-019 gb|AAA46350.1| (M10376) ORF5; putative [Cauliflower mosaic virus] 104 3e-019 >emb|CAA73042.1| (Y12432) polyprotein [Ananas comosus] Length = 871 Score = 575 bits (1467), Expect(3) = 0.0 Identities = 306/609 (50%), Positives = 404/609 (66%), Gaps = 8/609 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S ++HE +LRIVLQ LR++ LY K KCEFWL+ VAF GH++S GI VDP KIEA Sbjct: 175 VYSRSDADHEEHLRIVLQVLREKELYVKLKKCEFWLREVAFLGHLISGSGIAVDPKKIEA 234 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGF---STSATHLNLQDVSFMWLVKCDMSFLKL 38993 I W R TSVTE+ SF+GL YYRRFVE F ST T L + V F+W C+ SF +L Sbjct: 235 IKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLTRLTHKGVKFIWNDACERSFQEL 294 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K+ +T+APILTL V G G+ +Y DAS G+ VLM+ I Y SR+LK +E NYPT DL Sbjct: 295 KQRLTTAPILTLPVAGAGYVVYSDASLNGLGCVLMQDDKVIAYASRQLKEYEKNYPTHDL 354 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +VFAL +WRHYLYG + E YTDH SL+ + Q++LN R RW+ELLKDYDL+ILYH Sbjct: 355 ELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYH 414 Query: 38632 PGKKNMVAYSLSRKQ*V-----WVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLA 38468 PGK N+VA +LSRK V P + + L L+I M + + Sbjct: 415 PGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLV------- 467 Query: 38467 YMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSI 38288 VQ +L DR + Q D L ++ +++ G TLD DG+++F GRI VP Sbjct: 468 ---VQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIK 524 Query: 38287 QLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGG 38108 + IL EAH Y+IH G KMY+DL+ Y W G++ D+ +FV++CL QQVK EH G Sbjct: 525 EDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAG 584 Query: 38107 AFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLAR 37928 + L I WKW++ITMDFV GLP++ G D+I+VIVD+LTKSAHF+P+ + ++ RLA+ Sbjct: 585 KLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQ 644 Query: 37927 IYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQV 37748 +Y+ E+VR HGVP SI+SDR ++F S F + QD LGTR+D S AFHPQ+D QSE TIQ Sbjct: 645 VYLDEIVRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQT 704 Query: 37747 LEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDP 37568 LEDML CV++F G Q P+A+FAYN+ + ++I+M F ALYGR CRS + W E + Sbjct: 705 LEDMLRACVIDFQGGWSQHLPMAEFAYNNSYQASIKMAPFEALYGRKCRSPLHWSEVGES 764 Query: 37567 RPRGTDLIQGALEQVRV 37517 G D++Q A +VR+ Sbjct: 765 LALGPDVLQEAEVKVRI 781 Score = 342 bits (869), Expect(3) = e-164 Identities = 169/278 (60%), Positives = 204/278 (72%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PIS PYRMAPAELREL+AQLQ+LL KGFIRPS +PWGA VLFVKKKD S R+C++YR Sbjct: 15 TTPISKAPYRMAPAELRELRAQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCVDYR 74 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 +LNKVT+KNKY +P IDD FD +QG+CV+SKIDL SGY QLKI +V KTAF TR GHY Sbjct: 75 ELNKVTIKNKYPLPRIDDLFDQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHY 134 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF V FGL NAP AFM LMN +FKPYL+ FV+VFIDDIL+YS+S Sbjct: 135 EFAVMPFGLTNAPTAFMDLMNRVFKPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVL 194 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 K LY K KCEF L V+FLGH++S G+ VD KIEA+K W + T+V+++ SF+GLA Sbjct: 195 REKELYVKLKKCEFWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLA 254 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRF+ F+ ++ LT LT + V FIW+ CE SFQ Sbjct: 255 GYYRRFVERFAKLSTPLTRLTHKGVKFIWNDACERSFQ 292 Score = 253 bits (639), Expect = 3e-064 Identities = 163/374 (43%), Positives = 217/374 (57%), Gaps = 7/374 (1%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 L+S I VDPKKIE IKDW R SV +I SFLGLAGYYRR + + Sbjct: 219 LISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLTRLTHKG 278 Query: 68552 L------SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + +C + L + + L L + ++Y DAS GLGCVLMQ KV Sbjct: 279 VKFIWNDACERSFQELKQRLTTAPILTLPVAGAGY----VVYSDASLNGLGCVLMQDDKV 334 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 +AYASRQLK +EK Y HDLEL VVFALK+W +YLYG V+T+H+SL+Y+F Q++L Sbjct: 335 IAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELN 394 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 LR+R WLELLKDYD+TILYHPGK NVVADALS K SM +LAM V++ L + ++ L Sbjct: 395 LRQRRWLELLKDYDLTILYHPGKANVVADALSRK--SMENLAMHVVTQPRLIEQMKRLEL 452 Query: 69074 SFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLR 69253 V + L+ + R +Q D +L KI+ K++ LD +G++R Sbjct: 453 EIVTPDTPMRLMTLV--VQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMR 510 Query: 69254 IKGHICVPR-TGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRC 69430 +G ICVP +GI D + G +Y DLK Y +K+D+ +FV++C Sbjct: 511 FRGRICVPADSGIKEDILQEAHRAPYAIH-PGGTKMYKDLKLLYWWPGIKKDVGEFVAKC 569 Query: 69431 LNCQQVKHEHQKPGGVTLRIP 69493 L CQQVK EH+ P G +P Sbjct: 570 LTCQQVKAEHRVPAGKLQSLP 590 Score = 217 bits (548), Expect = 2e-053 Identities = 115/223 (51%), Positives = 146/223 (64%), Gaps = 3/223 (1%) Frame = +1 Query: 69304 MEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRF---CISMFELSASEA*TPKAWR 69474 ++E + Y+IHP TK L+ + +K F C++ ++ A A + Sbjct: 528 LQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHR--VPAGK 585 Query: 69475 CDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAK 69654 S IP WK E I +D V L R+ D IWVIV+RLTKSAHF+P+ TT+ ++LA+ Sbjct: 586 LQSLP-IPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQ 644 Query: 69655 IYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQV 69834 +Y+ EIVRLHGV SI+SDR T+F+SHFW S+ LGTR+D ST FHPQ+D QSE IQ Sbjct: 645 VYLDEIVRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQT 704 Query: 69835 LEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 LEDML ACVIDF W Q LP+ EFAYNNSY S +MAPFEALYGR Sbjct: 705 LEDMLRACVIDFQGGWSQHLPMAEFAYNNSYQASIKMAPFEALYGR 750 Score = 196 bits (492), Expect(3) = e-164 Identities = 102/182 (56%), Positives = 133/182 (73%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S +GLG VLM + VI YASRQLK +E NYPTHDL+LAAVVFALK WRHYLYG Sbjct: 313 YVVYSDASLNGLGCVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYG 372 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 +CEVYTDH+SL Y+FTQK+LNLR+RRW+ELLKD D+TILYH GKANVVADALSRK SM Sbjct: 373 ERCEVYTDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRK--SM 430 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 +LA V++ L +++ L + + + + + + + L++IK Q D +L+ Sbjct: 431 ENLAMHVVTQPRLIEQMKRLELEIVTPDTPMR---LMTLVVQPTLLDRIKEKQASDVELQ 487 Query: 57847 RI 57852 +I Sbjct: 488 KI 489 Score = 159 bits (397), Expect(2) = 3e-070 Identities = 96/208 (46%), Positives = 121/208 (58%), Gaps = 11/208 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G +SKIDL+S YHQLK++ ED+SKTAF+TRYGHYEF VM F LTNA FMDLMN F Sbjct: 99 GSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHYEFAVMPFGLTNAPTAFMDLMNRVF 158 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL---SVQRR 68388 + Y +HE HLR V +L+EK+LY K KCE WL + Sbjct: 159 KPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVLREKELYVKLKKCEFWLREVAFLGH 218 Query: 68389 YHGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLL--------STIYDFLSIASTLTRLT*K 68544 GS D +++ + L + R + F +++ LTRLT K Sbjct: 219 LISGSGIAVDPKKIE-AIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLTRLTHK 277 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 V F+W+D CE SFQ+LK LTTA ILTLPV G+VVY Sbjct: 278 GVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVY 316 Score = 136 bits (339), Expect(2) = 3e-070 Identities = 64/105 (60%), Positives = 83/105 (78%) Frame = +2 Query: 67748 DSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVK 67927 D +I+F ID+ GT PI PYR+ PAEL+E++ QLQDLL+K FIR SVS WGAP+LFVK Sbjct: 2 DREIEFVIDLVPGTTPISKAPYRMAPAELRELRAQLQDLLDKGFIRPSVSPWGAPVLFVK 61 Query: 67928 RKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +KD + +C+DYR+LNK+TI N YP+PRIDDLFD LQG+ V ++ Sbjct: 62 KKDGSLRLCVDYRELNKVTIKNKYPLPRIDDLFDQLQGSCVYSKI 106 Score = 99.8 bits (245), Expect(3) = 0.0 Identities = 51/89 (57%), Positives = 61/89 (68%) Frame = -3 Query: 37514 QDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEIL 37335 ++RL QSR +SYAD RR L F V D +FL VSP +G+ RFG GKLSPR+IGP+EIL Sbjct: 783 RERLLTAQSRQRSYADRRRRDLEFQVGDHVFLKVSPTRGIKRFGIRGKLSPRFIGPYEIL 842 Query: 37334 RIAGEVAYELDLPPTFSAIHPVF*VSMRR 37248 G VAY L LPP S +H VF VS+ R Sbjct: 843 ERVGPVAYRLALPPNLSGVHNVFHVSVVR 871 Score = 92.1 bits (225), Expect(3) = e-164 Identities = 40/88 (45%), Positives = 58/88 (65%) Frame = +3 Query: 57891 IDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDI 58070 +D +G++ + R+CVP + IL EAH + Y+IHPG TKMY DLK + W ++ D+ Sbjct: 503 LDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDV 562 Query: 58071 VDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 +FVA+C CQQVK EH+ P G L+ +P Sbjct: 563 GEFVAKCLTCQQVKAEHRVPAGKLQSLP 590 Score = 44.9 bits (104), Expect(3) = 0.0 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+DLM R+F+ LD FV++F+DDILV Sbjct: 141 FGLTNAPTAFMDLMNRVFKPYLDRFVVVFIDDILV 175 >dbj|BAA95869.1| (AP002071) Similar to Sorghum bicolor 22 kDa kafirin cluster; polyprotein. (AF061282) [Oryza sativa] Length = 1524 Score = 546 bits (1391), Expect(4) = 0.0 Identities = 283/611 (46%), Positives = 394/611 (64%), Gaps = 3/611 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE +LR+VL+ L++ +LYAKFSKC+FWLK V F GH+V+ +G+ VDP +E+ Sbjct: 745 IYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVES 804 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W P +VT+V SF+GL YYRRF+E FS A T L ++ F+W +C+ SF++L Sbjct: 805 VTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFVEL 864 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K + SAP+L L + F +YCDAS G+ VLM+ G + Y SR+L+ HE NYPT DL Sbjct: 865 KRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDL 924 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL G + E YTDH SL+ I Q DLN R RW+EL+KDYD+ I YH Sbjct: 925 ELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYH 984 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQ 38453 PGK N+VA +LSRK V + +C E L+ + L I V A + Q Sbjct: 985 PGKANVVADALSRKSYCNVAWVEQLCCEVQRDLE-------HLNLGIVEHGFVAA-LEAQ 1036 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILS 38273 +L ++ R Q D + L+ + G D G + R+ VP + LIL+ Sbjct: 1037 PTLVEQVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILT 1096 Query: 38272 EAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRL 38093 EAH+ +YSIH G+ KMY+DL++ + W MR +IA+FV+ C Q+VK EH R G + L Sbjct: 1097 EAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPL 1156 Query: 38092 SISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWE 37913 I EWKW+ I MDF+ GLP+TS G DSI+V+VD+LTK AHF+PV + +S +LA +Y+ Sbjct: 1157 QIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLAELYLAR 1216 Query: 37912 VVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDML 37733 ++ HGVP I+SDRGSQFTS F Q+ELGTR++ S A+HPQTD Q+E Q+LEDML Sbjct: 1217 IMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDML 1276 Query: 37732 HVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGT 37553 C L+FGG D+ P A+F+YN+ + +++QM F ALYGR CR+ + W ++ + + GT Sbjct: 1277 RACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGRRCRTPLFWDQTGERQLFGT 1336 Query: 37552 DLIQGALEQVRVFK 37511 +++ A E+VR + Sbjct: 1337 EVLNEAEEKVRAVR 1350 Score = 302 bits (764), Expect(3) = e-132 Identities = 154/277 (55%), Positives = 188/277 (67%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PI PYRM EL E+K Q+ E L KG+IRPS +PWGA V+FV+KKD++ RMC++YR Sbjct: 585 TAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYR 644 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+KNKY +P IDD FD ++GA VFSKIDL SGY QL+I ++PKTAF TR G + Sbjct: 645 ALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLF 704 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E V SFGL NAPA FM LMN +F +L+ FV+VFIDDILIYSKS + Sbjct: 705 ECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKL 764 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 LYAKF KC+F L V FLGH+V+ GV VD + +E+V W P V+ V SF+GLA Sbjct: 765 KEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLA 824 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 YYRRFI FS IA +T L K+ FIWS EC SF Sbjct: 825 GYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSF 861 Score = 222 bits (559), Expect = 8e-055 Identities = 148/374 (39%), Positives = 211/374 (55%), Gaps = 8/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +V+ + + VDP +E++ W P +V Q+ SFLGLAGYYRR S I+ P Sbjct: 789 IVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKE 848 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + C + V L + L+L P Q ++ +Y DAS+ GLGCVLMQ GKV Sbjct: 849 EKFIWSAECNRSFVELKRRLVSAPVLIL---PDQTKD-FQVYCDASRQGLGCVLMQDGKV 904 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 V+YASRQL+ HE Y HDLEL VV ALKIW +YL G V+T+H+SL+YIF Q DL Sbjct: 905 VSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLN 964 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 LR+R WLEL+KDYDM I YHPGK NVVADALS K S ++A ++ + +D++ L+ Sbjct: 965 LRQRRWLELIKDYDMGIHYHPGKANVVADALSRK--SYCNVAWVEQLCCEVQRDLEHLN- 1021 Query: 69074 SFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLR 69253 L I E G + + Q D ++ +++ + +A+ + D +G + Sbjct: 1022 ---LGIVEHGFVAAL-EAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIW 1077 Query: 69254 IKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCL 69433 + +CVP D + G +Y DLK+ + M+R+I +FV+ C Sbjct: 1078 MGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCD 1137 Query: 69434 NCQQVKHEHQKPGGV--TLRIP 69493 CQ+VK EHQ+P G+ L+IP Sbjct: 1138 VCQRVKAEHQRPAGLLQPLQIP 1159 Score = 212 bits (534), Expect = 7e-052 Identities = 109/238 (45%), Positives = 148/238 (61%), Gaps = 1/238 (0%) Frame = +1 Query: 69259 GSYMC-SSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFE 69435 G +C +++L L + E + YSIHP +TK L+ + + + + F Sbjct: 1079 GERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDV 1138 Query: 69436 LSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFV 69615 +A + IPEWK E I +D + L RT D IWV+V+RLTK AHF+ Sbjct: 1139 CQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFI 1198 Query: 69616 PVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFH 69795 PV TTY+ KKLA++Y+ I+ LHGV I+SDRG++F S FW + +ELGTR++ ST +H Sbjct: 1199 PVHTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYH 1258 Query: 69796 PQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 PQTD Q+E + Q+LEDML AC +DFG WD+ LP EF+YNNSY S +MAPFEALYGR Sbjct: 1259 PQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGR 1317 Score = 185 bits (464), Expect(3) = e-132 Identities = 100/193 (51%), Positives = 135/193 (69%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F VYCD S GLG VLM + V++YASRQL+ HE NYPTHDL+LAAVV ALK WRHYL Sbjct: 882 DFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 941 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 G +CEVYTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ I YH GKANVVADALSRK S Sbjct: 942 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRK--S 999 Query: 57664 MGSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKL 57843 ++A + + R+++ L L ++E GF A +EA+ + +E+++ Q D ++ Sbjct: 1000 YCNVAWVEQLCCEVQRDLEHL-----NLGIVEH-GFVAALEAQPTLVEQVRIAQASDPEI 1053 Query: 57844 RRI*DMVLRGEAK 57882 + + G+A+ Sbjct: 1054 AELKKNMRVGKAR 1066 Score = 141 bits (353), Expect(2) = 1e-065 Identities = 69/131 (52%), Positives = 92/131 (69%) Frame = +2 Query: 67670 TNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKD 67849 T LE I +V E+ EVFP DL +PP DI+F ID+ GT PI PYR+ EL E+K Sbjct: 546 TKKLEDIPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKK 605 Query: 67850 QLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD 68029 Q+ + L K +IR S S WGAP++FV++KD+ MC+DYR LN++TI N YP+PRIDDLFD Sbjct: 606 QVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFD 665 Query: 68030 *LQGASVSPRL 68062 L+GA+V ++ Sbjct: 666 QLKGATVFSKI 676 Score = 138 bits (343), Expect(2) = 1e-065 Identities = 94/208 (45%), Positives = 115/208 (55%), Gaps = 10/208 (4%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQL++REEDI KTAF TRYG +E VM F LTNA A FM+LMN F Sbjct: 669 GATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVF 728 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRRYH 68394 ++ +EEHE HLR V LKE +LY KFSKC+ WL VQ H Sbjct: 729 MEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGH 788 Query: 68395 ----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KE 68547 G D N + +R L+ Y +F IA +T+L KE Sbjct: 789 IVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKE 848 Query: 68548 VTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 F+WS EC SF +LK L +A +L LP + + F VY Sbjct: 849 EKFIWSAECNRSFVELKRRLVSAPVLILPDQTKDFQVY 886 Score = 108 bits (266), Expect = 2e-020 Identities = 54/109 (49%), Positives = 71/109 (64%) Frame = +3 Query: 57837 EAETNLRYGIARRGKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATK 58016 E + N+R G AR E DE+G + + ER+CVP +L IL EAH ++YSIHPG+TK Sbjct: 1055 ELKKNMRVGKARGFVE---DEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTK 1111 Query: 58017 MYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 MY DLK+ F W M+ +I +FVA C CQ+VK EHQRP G L+ + E Sbjct: 1112 MYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPE 1160 Score = 102 bits (253), Expect(4) = 0.0 Identities = 54/122 (44%), Positives = 77/122 (62%) Frame = -3 Query: 37520 SIQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFE 37341 ++++RLRI QSR +SYAD RR L F D ++L V+P++GV RF GKL+PR++GP+ Sbjct: 1348 AVRERLRIAQSRQKSYADNRRRELAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYR 1407 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVV 37161 IL GEVAY+L+LP IH VF VS + + D +E+ + LT+VE+ Sbjct: 1408 ILERRGEVAYQLELPSNMLGIHNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTR 1467 Query: 37160 IL 37155 IL Sbjct: 1468 IL 1469 Score = 61.3 bits (146), Expect = 2e-006 Identities = 34/118 (28%), Positives = 58/118 (48%), Gaps = 1/118 (0%) Frame = -3 Query: 40718 FQRLAPSIFSGAIGE-DAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY*E 40542 F R+ P FS +AH++ ++L L + F HQ +GPA WW Y Sbjct: 96 FLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPASVWWDNYMV 155 Query: 40541 SRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFSRHA 40365 +RP G+ ++W++F +F +P + + F L+ G+ T+ EY F+ +R+A Sbjct: 156 TRPAGA-EVTWTEFRHSFNKAQVPEGIVAQKKREFRSLQQGTRTVIEYLHEFNLLARYA 213 Score = 57.8 bits (137), Expect = 2e-005 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Frame = +2 Query: 53645 IKFLKLKPPVFKGAESE-DAYDFLVDCHELLHKMDIVERFGVEFVTYQFKRDAKMWWQSY 53821 ++FL++KPP F + +A+D+L + L+ + E+ V F T+Q + A +WW +Y Sbjct: 94 LEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPASVWWDNY 153 Query: 53822 VEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLSLEQG 53950 + +PA A + W F F + P + + EF SL+QG Sbjct: 154 MVTRPAGA-EVTWTEFRHSFNKAQVPEGIVAQKKREFRSLQQG 195 Score = 57.4 bits (136), Expect = 3e-005 Identities = 39/117 (33%), Positives = 58/117 (49%) Frame = +1 Query: 54634 KVETSDAVITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGE 54813 + +++ VI TF V +LFD G T S+ S FA L L +P+ V T G Sbjct: 393 EAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP-GG 451 Query: 54814 SVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTL 54984 + S V G +LI+L+ D DVILGM WL+ + ++DC ++T+ L Sbjct: 452 GMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCASRTIKL 508 Score = 50.0 bits (117), Expect = 0.005 Identities = 37/113 (32%), Positives = 51/113 (44%) Frame = +3 Query: 55758 EVETCDVVITCTLLVCDCMTFVLFDPRYTFSYVSSSFATGLDLYCDFLDIPIRVSTTVGE 55937 E ++ VI T V +LFD T S++S FA L L IP+RV T G Sbjct: 393 EAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP-GG 451 Query: 55938 SVIVVKVYRSCLVTFVGSNTYVDFIILEMVVFDVIQGMTWLSPNFAIIDCNAK 56096 + S V G + I+LE DVI GM WL+ + +IDC ++ Sbjct: 452 GMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCASR 504 Score = 40.6 bits (93), Expect = 3.4 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +1 Query: 66367 TIMDFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEADR 66546 T +F F VP + K+ EF LQQG +V E+ +F+ LAR+A T+A++ Sbjct: 164 TWTEFRHSFNKAQVPEGIVAQKKREFRSLQQGTRTVIEYLHEFNLLARYAPEDVRTDAEK 223 Query: 66547 LIRFVKG 66567 +F+ G Sbjct: 224 QEKFMSG 230 Score = 38.3 bits (87), Expect(4) = 0.0 Identities = 16/35 (45%), Positives = 25/35 (70%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F++LM ++F LD FV++F+DDIL+ Sbjct: 711 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILI 745 Score = 35.6 bits (80), Expect(3) = e-132 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +3 Query: 56316 VSIVCEFLDVFPADLPSMPLDRDIDFCIDVERLLAP 56423 + IV E+ +VFP DL +MP RDI+F ID+ AP Sbjct: 552 IPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTAP 587 Score = 32.8 bits (73), Expect(4) = 0.0 Identities = 16/35 (45%), Positives = 19/35 (53%) Frame = -2 Query: 37122 IPIVKVCWKHH*VEKATLETEQEMQEQFPSLFEPS 37018 I KV W HH E+AT E E E++ P LF S Sbjct: 1481 IRFCKVQWSHHSEEEATWEREDELKATHPHLFASS 1515 >gb|AAD27547.1|AF111709_1 (AF111709) polyprotein [Oryza sativa subsp. indica] Length = 1521 Score = 544 bits (1386), Expect(4) = 0.0 Identities = 281/611 (45%), Positives = 395/611 (63%), Gaps = 4/611 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE +LR+VL+ L++ +LYAKFSKC+FWL V F GHV++ +G+ VDP +E+ Sbjct: 742 IYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVES 801 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W P +V+++ SF+GL YYRRF+E FS A T L +D F W +CD SF +L Sbjct: 802 VTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDKSFEEL 861 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K+ + SAP+L L F +YCDAS G+ VLM++G + Y SR+L+ HE NYPT DL Sbjct: 862 KKKLVSAPVLILPDPTKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDL 921 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL G + E YTDH SL+ I Q DLN R RW+EL+KDYD+SI YH Sbjct: 922 ELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYH 981 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDI-FYSRCVLAYMGV 38456 PGK N+VA +LSRK + +C E L +F L++ +A + Sbjct: 982 PGKANVVADALSRKNYCTALCVEGMCEE----LRQEFE-----HLNVGIVEHGFVAALEA 1032 Query: 38455 QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLIL 38276 + +L D+ R Q D + L+ + G D G + R+ VP + LIL Sbjct: 1033 RPTLVDQVRAAQVNDPEIAELKKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLIL 1092 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 +EAH+ +YSIH G+ KMY+DL++ + W MR +IA+FV+ C Q+VK EH R G + Sbjct: 1093 TEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQP 1152 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I EWKW+ I MDF+ GLP+TS G DSI+V+VD+LTK AHF+PVQ+ ++ RLA +Y+ Sbjct: 1153 LQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVQTTYTGKRLAELYLA 1212 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 ++ HGVP I+SDRGSQFTS F Q+E+GTR++ S A+HPQTD Q+E Q+LEDM Sbjct: 1213 RIMCLHGVPRKIVSDRGSQFTSKFWQKLQEEMGTRLNFSTAYHPQTDGQTERVNQILEDM 1272 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRG 37556 L C L+FGG D+ P A+F+YN+ + +++QM F ALYGR CR+ + W ++ + + G Sbjct: 1273 LRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFKALYGRKCRTPLFWDQTGERQLFG 1332 Query: 37555 TDLIQGALEQVRVFK 37511 T+++ A E+VR+ + Sbjct: 1333 TEVLAEAEEKVRIIR 1347 Score = 303 bits (768), Expect(3) = e-134 Identities = 155/278 (55%), Positives = 192/278 (68%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PI PYRMA EL E+K Q+ E L KG+IRPS +PWGA V+FV+KKD++ RMC++YR Sbjct: 582 TAPIYKRPYRMAANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYR 641 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+KNKY +P IDD FD ++GA VFSKIDL SGY QL+I ++PKTAF TR G Y Sbjct: 642 ALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLY 701 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E V SFGL NAPA FM LMN +F +L+ FV+VFIDDILIYSKS + Sbjct: 702 ECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKL 761 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 LYAKF KC+F L V FLGHV++ GV VD S +E+V W P VS + SF+GLA Sbjct: 762 KEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFLGLA 821 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRFI FS IA +T L K++ F W+ EC++SF+ Sbjct: 822 GYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDKSFE 859 Score = 216 bits (544), Expect = 4e-053 Identities = 143/374 (38%), Positives = 210/374 (55%), Gaps = 11/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +++ + + VDP +E++ W P +V QI SFLGLAGYYRR S I+ P Sbjct: 786 VITAQGVAVDPSNVESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKD 845 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + C + L K L+L ++ +Y DAS+ GLGCVLMQ+G+V Sbjct: 846 EKFKWTTECDKSFEELKKKLVSAPVLILPDPTKDFQ----VYCDASRHGLGCVLMQEGRV 901 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLEL VV ALKIW +YL G V+T+H+SL+YIF Q DL Sbjct: 902 VAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLN 961 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLK--AVSMGSLAMLQVSKRPLAK-DVQL 69064 LR+R WLEL+KDYDM+I YHPGK NVVADALS K ++ M + ++ +V + Sbjct: 962 LRQRRWLELIKDYDMSIHYHPGKANVVADALSRKNYCTALCVEGMCEELRQEFEHLNVGI 1021 Query: 69065 LSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEG 69244 + + FV + + L+ + + Q +D ++ +++ + +A+ + D G Sbjct: 1022 VEHGFVAAL--EARPTLV--------DQVRAAQVNDPEIAELKKNMRVGKARDFLEDEHG 1071 Query: 69245 VLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVS 69424 + + +CVP D + G +Y DLK+ + M+R+I +FV+ Sbjct: 1072 TIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVA 1131 Query: 69425 RCLNCQQVKHEHQKPGGV--TLRIP 69493 C CQ+VK EHQ+P G+ L+IP Sbjct: 1132 LCDVCQRVKAEHQRPAGLLQPLQIP 1156 Score = 212 bits (534), Expect = 7e-052 Identities = 108/238 (45%), Positives = 148/238 (61%), Gaps = 1/238 (0%) Frame = +1 Query: 69259 GSYMC-SSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFE 69435 G +C D++L L + E + YSIHP +TK L+ + + + + F Sbjct: 1076 GERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDV 1135 Query: 69436 LSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFV 69615 +A + IPEWK E I +D + L RT D IWV+V+RLTK AHF+ Sbjct: 1136 CQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFI 1195 Query: 69616 PVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFH 69795 PVQTTY K+LA++Y+ I+ LHGV I+SDRG++F S FW + +E+GTR++ ST +H Sbjct: 1196 PVQTTYTGKRLAELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKLQEEMGTRLNFSTAYH 1255 Query: 69796 PQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 PQTD Q+E + Q+LEDML AC +DFG WD+ LP EF+YNNSY S +MAPF+ALYGR Sbjct: 1256 PQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFKALYGR 1314 Score = 189 bits (475), Expect(3) = e-134 Identities = 99/193 (51%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F VYCD S GLG VLM E V+ YASRQL+ HE NYPTHDL+LAAVV ALK WRHYL Sbjct: 879 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 938 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 G +CEVYTDH+SL Y+FTQ DLNLR+RRW+EL+KD D++I YH GKANVVADALSRK Sbjct: 939 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRK--- 995 Query: 57664 MGSLAHSQVSRRPLAREVQTLANDFMRLEV-LEKGGFFACVEARSSFLEKIKGNQFDDEK 57840 + + + + L +F L V + + GF A +EAR + +++++ Q +D + Sbjct: 996 ------NYCTALCVEGMCEELRQEFEHLNVGIVEHGFVAALEARPTLVDQVRAAQVNDPE 1049 Query: 57841 LRRI*DMVLRGEAK 57882 + + + G+A+ Sbjct: 1050 IAELKKNMRVGKAR 1063 Score = 142 bits (354), Expect(2) = 6e-066 Identities = 71/140 (50%), Positives = 98/140 (69%), Gaps = 2/140 (1%) Frame = +2 Query: 67643 AHIGDTSVETNM--LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYR 67816 A I ++E N+ LE I +V E+ EVFP DL +PP +I+F ID+ GT PI+ PYR Sbjct: 532 AEIPVDTMEKNLRKLEDIPIVCEYPEVFPEDLTTMPPKREIEFRIDLAPGTAPIYKRPYR 591 Query: 67817 ITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN* 67996 + EL E+K Q+ + L K +IR S S WGAP++FV++KD+ MC+DYR LN++TI N Sbjct: 592 MAANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNK 651 Query: 67997 YPIPRIDDLFD*LQGASVSPRL 68062 YP+PRIDDLFD L+GA V ++ Sbjct: 652 YPLPRIDDLFDQLKGAKVFSKI 673 Score = 138 bits (345), Expect(2) = 6e-066 Identities = 91/208 (43%), Positives = 117/208 (55%), Gaps = 11/208 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQL++REEDI KTAF TRYG YE VM F LTNA A FM+LMN F Sbjct: 666 GAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVF 725 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 ++ +EEHE HLR V LKE +LY KFSKC+ WL+ + ++ G Sbjct: 726 MEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLT-EVKFLG 784 Query: 68398 ------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*K 68544 G D N + +R L+ Y +F IA +T+L K Sbjct: 785 HVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKK 844 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 + F W+ EC+ SF++LK L +A +L LP + F VY Sbjct: 845 DEKFKWTTECDKSFEELKKKLVSAPVLILPDPTKDFQVY 883 Score = 106 bits (262), Expect = 5e-020 Identities = 54/109 (49%), Positives = 70/109 (63%) Frame = +3 Query: 57837 EAETNLRYGIARRGKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATK 58016 E + N+R G AR E DE G + + ER+CVP +L IL EAH ++YSIHPG+TK Sbjct: 1052 ELKKNMRVGKARDFLE---DEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTK 1108 Query: 58017 MYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 MY DLK+ F W M+ +I +FVA C CQ+VK EHQRP G L+ + E Sbjct: 1109 MYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPE 1157 Score = 102 bits (252), Expect(4) = 0.0 Identities = 54/121 (44%), Positives = 78/121 (63%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEI 37338 I++RLRI QSR +SYAD RR L F D ++L V+P++GV RF GKL+PR++GP++I Sbjct: 1346 IRERLRIAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKI 1405 Query: 37337 LRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVI 37158 L GEVAY+L+LP IH VF VS + + + +++ + LT+VE+ V I Sbjct: 1406 LERRGEVAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRI 1465 Query: 37157 L 37155 L Sbjct: 1466 L 1466 Score = 60.9 bits (145), Expect = 3e-006 Identities = 34/118 (28%), Positives = 59/118 (49%), Gaps = 1/118 (0%) Frame = -3 Query: 40718 FQRLAPSIFSGAIGE-DAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY*E 40542 F R+ P FS +A+++ ++L L D F HQ +GPA WW + Sbjct: 95 FLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDNHMA 154 Query: 40541 SRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFSRHA 40365 +RP G+ ++W++F ++F +P V + F L G+ T++EY F+ +R+A Sbjct: 155 TRPPGT-EVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLARYA 212 Score = 58.9 bits (140), Expect = 1e-005 Identities = 42/126 (33%), Positives = 60/126 (47%) Frame = +1 Query: 54634 KVETSDAVITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGE 54813 + + + V+ TF V VLFD G T S+ S F L + L P+ V T Sbjct: 390 EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELRTPMRVHTPGNS 449 Query: 54814 SVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKP 54993 S V S L+ S +LI+L+ D DVILGM WL+ ++DC +TVTL Sbjct: 450 STSVSFS-PSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCANRTVTLTNE 508 Query: 54994 GTDSLV 55011 +++V Sbjct: 509 KGETVV 514 Score = 49.2 bits (115), Expect = 0.009 Identities = 37/110 (33%), Positives = 48/110 (43%) Frame = +3 Query: 55758 EVETCDVVITCTLLVCDCMTFVLFDPRYTFSYVSSSFATGLDLYCDFLDIPIRVSTTVGE 55937 E + V+ T V VLFD T S++S F L + L P+RV T G Sbjct: 390 EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELRTPMRVHTP-GN 448 Query: 55938 SVIVVKVYRSCLVTFVGSNTYVDFIILEMVVFDVIQGMTWLSPNFAIIDC 56087 S V S L+ S + I+LE DVI GM WL+ +IDC Sbjct: 449 SSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDC 498 Score = 46.9 bits (109), Expect = 0.045 Identities = 27/101 (26%), Positives = 50/101 (48%), Gaps = 1/101 (0%) Frame = +2 Query: 53648 KFLKLKPPVFKGAESE-DAYDFLVDCHELLHKMDIVERFGVEFVTYQFKRDAKMWWQSYV 53824 +FL+++PP F + +A D+L + L+ + ++ V F T+Q + A WW +++ Sbjct: 94 EFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDNHM 153 Query: 53825 EFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLSLEQG 53950 +P + WA F F + P + + EF +L QG Sbjct: 154 ATRPP-GTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQG 194 Score = 39.5 bits (90), Expect(3) = e-134 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = +3 Query: 56316 VSIVCEFLDVFPADLPSMPLDRDIDFCIDVERLLAP 56423 + IVCE+ +VFP DL +MP R+I+F ID+ AP Sbjct: 549 IPIVCEYPEVFPEDLTTMPPKREIEFRIDLAPGTAP 584 Score = 38.3 bits (87), Expect(4) = 0.0 Identities = 16/35 (45%), Positives = 25/35 (70%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F++LM ++F LD FV++F+DDIL+ Sbjct: 708 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILI 742 Score = 31.3 bits (69), Expect(4) = 0.0 Identities = 14/31 (45%), Positives = 18/31 (57%) Frame = -2 Query: 37110 KVCWKHH*VEKATLETEQEMQEQFPSLFEPS 37018 +V W HH E+AT E E E++ P LF S Sbjct: 1482 RVQWSHHSEEEATWEREDELKAAHPHLFTSS 1512 >dbj|BAA22515.1| (D90852) ORF_ID:o250#10~similar to [SwissProt Accession Number P19777] [Escherichia coli] Length = 307 Score = 643 bits (1640), Expect = 0.0 Identities = 306/307 (99%), Positives = 307/307 (99%) Frame = +1 Query: 20341 IWTGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLL 20520 +WTGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLL Sbjct: 1 MWTGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLL 60 Query: 20521 RIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKR 20700 RIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKR Sbjct: 61 RIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKR 120 Query: 20701 AHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQD 20880 AHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQD Sbjct: 121 AHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQD 180 Query: 20881 VMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAE 21060 VMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAE Sbjct: 181 VMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAE 240 Query: 21061 SFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLS 21240 SFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLS Sbjct: 241 SFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLS 300 Query: 21241 DNRCLEI 21261 DNRCLEI Sbjct: 301 DNRCLEI 307 >gb|AAD22153.1|AF061282_6 (AF061282) polyprotein [Sorghum bicolor] Length = 1484 Score = 540 bits (1375), Expect(4) = e-180 Identities = 283/604 (46%), Positives = 390/604 (63%), Gaps = 3/604 (0%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +LR+VLQ LR+ +LYAK SKCEFWL+ V+F GHVVS GI VDP K++ + W P Sbjct: 725 EHAEHLRLVLQKLREHKLYAKRSKCEFWLEEVSFLGHVVSNGGIAVDPSKVKDVLNWKPP 784 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSA 38972 T V+E+ SF+GL YYRRF+EGFS A T L ++ F+W KC SF + K+ +T+A Sbjct: 785 TDVSEIRSFLGLAGYYRRFIEGFSKLAKPMTALLEKNAKFVWSDKCQASFEEFKKRLTTA 844 Query: 38971 PILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVF 38792 P+L L F+IYCDAS +G+ VLM++G + Y SR+L+ HELNYPT DLELA +V Sbjct: 845 PVLVLPDLSKSFSIYCDASRLGLGCVLMQEGRVVAYASRQLRKHELNYPTHDLELAAVVH 904 Query: 38791 ALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMV 38612 AL IWRHYL G + + YTDH SL+ I Q DLN R RW+EL+KDYDL + YHPGK N+V Sbjct: 905 ALKIWRHYLIGHKSDIYTDHKSLKYIFTQTDLNLRQRRWLELIKDYDLEVHYHPGKANVV 964 Query: 38611 AYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRN 38432 A +LSRK+ + + E L +F+ + L + + + + +L + Sbjct: 965 ADALSRKKYANELQATPESEE----LCAEFA---YLNLGMVVNATEIE---ITPTLEEEI 1014 Query: 38431 RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRY 38252 Q ED L + V+ G +D +GVL F RI VP V IL EAHE Y Sbjct: 1015 VKGQLEDEKLKEIAQNVVLGKAPGFRIDDNGVLWFGKRICVPEVKAIRDTILREAHESAY 1074 Query: 38251 SIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKW 38072 SIH G+ KMY DLRQ Y W G++ D+A++V+ C Q+VK EH R G + + I EWKW Sbjct: 1075 SIHPGSTKMYLDLRQKYWWYGLKRDVAEYVALCDTCQRVKAEHQRPAGLLQPMKIPEWKW 1134 Query: 38071 DRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGV 37892 + + MDF+ GLP+T +G DSI+VIVD+LTK AHF+PV++ +S RLA +Y+ +V HGV Sbjct: 1135 EEVGMDFIVGLPRTQRGYDSIWVIVDRLTKVAHFIPVKTSYSGDRLAELYMERIVCLHGV 1194 Query: 37891 PVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEF 37712 P I+SDRG+QFTS F D LGT+++ S A+HPQTD Q+E Q+LEDML C L++ Sbjct: 1195 PKKIVSDRGTQFTSHFWKAVHDSLGTKLNFSTAYHPQTDGQTERINQILEDMLRACALQY 1254 Query: 37711 GGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGAL 37532 G D+ P A+F+YN+ + +++M F ALYGR CR+ + W ++ + + GTD+++ A Sbjct: 1255 GTSWDKSLPYAEFSYNNSYQQSLKMAPFEALYGRKCRTPLFWNQTGETQVFGTDVLRHAE 1314 Query: 37531 EQVRVFK 37511 +QVR + Sbjct: 1315 QQVRTIR 1321 Score = 316 bits (800), Expect(4) = e-160 Identities = 158/278 (56%), Positives = 199/278 (70%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PI+ PYRM EL ELK Q++EL KGFIRPS++PWGA V+FV KKD S RMC++YR Sbjct: 558 TAPIAKRPYRMGVKELEELKKQIKELQDKGFIRPSSSPWGAPVIFVDKKDGSQRMCVDYR 617 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+KNKY +P IDD FD ++GACVFSKIDL SGY QLKI +++PKTAF TR G Y Sbjct: 618 SLNEVTIKNKYPLPRIDDLFDQLRGACVFSKIDLRSGYHQLKIRNSDIPKTAFTTRYGLY 677 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E+ V SFGL NAPA FM +MN +F YL+ FV+VFIDDIL++SK+++ Sbjct: 678 EYTVMSFGLTNAPAYFMYMMNKVFMEYLDKFVVVFIDDILVFSKTKEEHAEHLRLVLQKL 737 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 LYAK KCEF L VSFLGHVVS G+ VD SK++ V W PT+VS++ SF+GLA Sbjct: 738 REHKLYAKRSKCEFWLEEVSFLGHVVSNGGIAVDPSKVKDVLNWKPPTDVSEIRSFLGLA 797 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRFI FS +A +T L ++N F+WS +C+ SF+ Sbjct: 798 GYYRRFIEGFSKLAKPMTALLEKNAKFVWSDKCQASFE 835 Score = 226 bits (569), Expect = 5e-056 Identities = 146/374 (39%), Positives = 200/374 (53%), Gaps = 8/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +VS I VDP K++ + +W P V +I SFLGLAGYYRR S ++ P Sbjct: 762 VVSNGGIAVDPSKVKDVLNWKPPTDVSEIRSFLGLAGYYRRFIEGFSKLAKPMTALLEKN 821 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C + + + L+L + +Y DAS++GLGCVLMQ+G+V Sbjct: 822 AKFVWSDKCQASFEEFKKRLTTAPVLVLP----DLSKSFSIYCDASRLGLGCVLMQEGRV 877 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLEL VV ALKIW +YL G ++T+H+SL+YIF Q DL Sbjct: 878 VAYASRQLRKHELNYPTHDLELAAVVHALKIWRHYLIGHKSDIYTDHKSLKYIFTQTDLN 937 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 LR+R WLEL+KDYD+ + YHPGK NVVADALS K + A + L + L+ Sbjct: 938 LRQRRWLELIKDYDLEVHYHPGKANVVADALSRKKYANELQATPE--SEELCAEFAYLNL 995 Query: 69074 SFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLR 69253 V+ +E + Q +D L +I V+ +A +D GVL Sbjct: 996 GMVVNATEI-------EITPTLEEEIVKGQLEDEKLKEIAQNVVLGKAPGFRIDDNGVLW 1048 Query: 69254 IKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCL 69433 ICVP D R + G +YLDL+Q Y +KRD+ ++V+ C Sbjct: 1049 FGKRICVPEVKAIRDTILREAHESAYSIHPGSTKMYLDLRQKYWWYGLKRDVAEYVALCD 1108 Query: 69434 NCQQVKHEHQKPGGV--TLRIP 69493 CQ+VK EHQ+P G+ ++IP Sbjct: 1109 TCQRVKAEHQRPAGLLQPMKIP 1130 Score = 206 bits (519), Expect = 4e-050 Identities = 103/223 (46%), Positives = 142/223 (63%) Frame = +1 Query: 69304 MEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFELSASEA*TPKAWRCDS 69483 + E + +YSIHP +TK L + ++ + + +A + Sbjct: 1066 LREAHESAYSIHPGSTKMYLDLRQKYWWYGLKRDVAEYVALCDTCQRVKAEHQRPAGLLQ 1125 Query: 69484 EDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYI 69663 IPEWK E + +D +V L RT +D IWVIV+RLTK AHF+PV+T+Y+ +LA++Y+ Sbjct: 1126 PMKIPEWKWEEVGMDFIVGLPRTQRGYDSIWVIVDRLTKVAHFIPVKTSYSGDRLAELYM 1185 Query: 69664 REIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLED 69843 IV LHGV I+SDRGT+F SHFW ++H LGT+++ ST +HPQTD Q+E I Q+LED Sbjct: 1186 ERIVCLHGVPKKIVSDRGTQFTSHFWKAVHDSLGTKLNFSTAYHPQTDGQTERINQILED 1245 Query: 69844 ML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 ML AC + +G WD+ LP EF+YNNSY S +MAPFEALYGR Sbjct: 1246 MLRACALQYGTSWDKSLPYAEFSYNNSYQQSLKMAPFEALYGR 1288 Score = 178 bits (446), Expect(4) = e-160 Identities = 98/192 (51%), Positives = 122/192 (63%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F +YCD S GLG VLM E V+ YASRQL+ HE NYPTHDL+LAAVV ALK WRHYL Sbjct: 855 SFSIYCDASRLGLGCVLMQEGRVVAYASRQLRKHELNYPTHDLELAAVVHALKIWRHYLI 914 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 G K ++YTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ + YH GKANVVADALSRK Sbjct: 915 GHKSDIYTDHKSLKYIFTQTDLNLRQRRWLELIKDYDLEVHYHPGKANVVADALSRK--- 971 Query: 57664 MGSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKL 57843 + E + L +F L L +E + E+I Q +DEKL Sbjct: 972 ------KYANELQATPESEELCAEFAYLN-LGMVVNATEIEITPTLEEEIVKGQLEDEKL 1024 Query: 57844 RRI*DMVLRGEA 57879 + I V+ G+A Sbjct: 1025 KEIAQNVVLGKA 1036 Score = 141 bits (353), Expect(2) = 1e-066 Identities = 68/124 (54%), Positives = 91/124 (72%) Frame = +2 Query: 67691 LVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLN 67870 LVV EF +VFP +LP +PPD DI+F I++ GT PI PYR+ EL+E+K Q+++L + Sbjct: 526 LVVDEFPDVFPDELPGMPPDRDIEFIIELLPGTAPIAKRPYRMGVKELEELKKQIKELQD 585 Query: 67871 KVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 K FIR S S WGAP++FV +KD MC+DYR LN++TI N YP+PRIDDLFD L+GA V Sbjct: 586 KGFIRPSSSPWGAPVIFVDKKDGSQRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLRGACV 645 Query: 68051 SPRL 68062 ++ Sbjct: 646 FSKI 649 Score = 141 bits (352), Expect(2) = 1e-066 Identities = 92/208 (44%), Positives = 112/208 (53%), Gaps = 10/208 (4%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQLK+R DI KTAF TRYG YE+ VM F LTNA A FM +MN F Sbjct: 642 GACVFSKIDLRSGYHQLKIRNSDIPKTAFTTRYGLYEYTVMSFGLTNAPAYFMYMMNKVF 701 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRRYH 68394 +Y KEEH HLR V L+E KLY K SKCE WL V H Sbjct: 702 MEYLDKFVVVFIDDILVFSKTKEEHAEHLRLVLQKLREHKLYAKRSKCEFWLEEVSFLGH 761 Query: 68395 ----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KE 68547 GG D + +D+ +R L+ Y F +A +T L K Sbjct: 762 VVSNGGIAVDPSKVKDVLNWKPPTDVSEIRSFLGLAGYYRRFIEGFSKLAKPMTALLEKN 821 Query: 68548 VTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 F+WSD+C+ SF++ K LTTA +L LP + F +Y Sbjct: 822 AKFVWSDKCQASFEEFKKRLTTAPVLVLPDLSKSFSIY 859 Score = 105 bits (259), Expect(4) = e-160 Identities = 47/91 (51%), Positives = 62/91 (67%) Frame = +3 Query: 57891 IDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDI 58070 ID+ G+L +R+CVP V + TIL EAH S YSIHPG+TKMY DL+Q + W ++ D+ Sbjct: 1041 IDDNGVLWFGKRICVPEVKAIRDTILREAHESAYSIHPGSTKMYLDLRQKYWWYGLKRDV 1100 Query: 58071 VDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++VA C CQ+VK EHQRP G L+ M E Sbjct: 1101 AEYVALCDTCQRVKAEHQRPAGLLQPMKIPE 1131 Score = 103 bits (255), Expect(4) = e-180 Identities = 56/122 (45%), Positives = 75/122 (60%) Frame = -3 Query: 37520 SIQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFE 37341 +I+D LR+ QSR +SYAD RR L F V D ++L VSPM+ V RF GKL PRY+GPF+ Sbjct: 1319 TIRDNLRVAQSRQKSYADTRRRELAFEVGDYVYLKVSPMRSVKRFNMKGKLVPRYVGPFK 1378 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVV 37161 +L GEVAY L+LP + S +H VF VS + + L + + + LT+ E V Sbjct: 1379 VLERRGEVAYRLELPESLSGVHDVFHVSQLKKCLRVPEEQLPLEELSVKGDLTYEEYPVK 1438 Query: 37160 IL 37155 IL Sbjct: 1439 IL 1440 Score = 62.5 bits (149), Expect = 9e-007 Identities = 34/120 (28%), Positives = 59/120 (48%), Gaps = 1/120 (0%) Frame = -3 Query: 40724 GVFQRLAPSIFS-GAIGEDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY 40548 G F + P +F+ A +A ++ QL D + + Q +G A+ WW +Y Sbjct: 72 GEFMKGRPPVFTHSADPMEADDWLRAVERQLNIAQCNDLEKVLYASGQLQGAAQTWWESY 131 Query: 40547 *ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFSRH 40368 +RP + P++W +F + F +R + V + F L GSMT++EY F + +R+ Sbjct: 132 QAARPNNASPVTWLEFCRDFRARHINEGVMELKQEEFRSLRMGSMTVAEYHDTFEQLARY 191 Query: 40367 A 40365 A Sbjct: 192 A 192 Score = 49.2 bits (115), Expect(2) = 6e-005 Identities = 26/69 (37%), Positives = 39/69 (55%) Frame = +1 Query: 66361 PSTIMDFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEA 66540 P T ++F + F A+ + ME K+ EF L+ G M+VAE+ F LAR+A +A Sbjct: 141 PVTWLEFCRDFRARHINEGVMELKQEEFRSLRMGSMTVAEYHDTFEQLARYAPNDVREDA 200 Query: 66541 DRLIRFVKG 66567 D+ F+KG Sbjct: 201 DKQRLFMKG 209 Score = 47.6 bits (111), Expect(2) = 4e-004 Identities = 29/101 (28%), Positives = 49/101 (47%), Gaps = 1/101 (0%) Frame = +2 Query: 53648 KFLKLKPPVFK-GAESEDAYDFLVDCHELLHKMDIVERFGVEFVTYQFKRDAKMWWQSYV 53824 +F+K +PPVF A+ +A D+L L+ + V + + Q + A+ WW+SY Sbjct: 73 EFMKGRPPVFTHSADPMEADDWLRAVERQLNIAQCNDLEKVLYASGQLQGAAQTWWESYQ 132 Query: 53825 EFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLSLEQG 53950 +P A P+ W F F ++ + ++EF SL G Sbjct: 133 AARPNNASPVTWLEFCRDFRARHINEGVMELKQEEFRSLRMG 174 Score = 42.2 bits (97), Expect = 1.1 Identities = 34/144 (23%), Positives = 65/144 (44%) Frame = +1 Query: 54637 VETSDAVITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGES 54816 V+ ++ TF + VLFD G + ++ S +F L ++ P+ V++ G + Sbjct: 378 VQEGPEIMMGTFSINSIPATVLFDSGASHTFISQAFVRVHSLPLVAMNTPMLVNSP-GGT 436 Query: 54817 VIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKPG 54996 + V S + G + + +++ DVILG+ W+ + ++C + V L P Sbjct: 437 IPVSLRCPSASLSLRGVDFPISPMVMRTSGIDVILGLDWMKQHATNINCKERVVVLTTP- 495 Query: 54997 TDSLV*EGDYISTPVRIISCLRAK 55068 +G+ IS V + + L AK Sbjct: 496 ------KGERISVDVTMQAPLAAK 513 Score = 39.9 bits (91), Expect(4) = e-160 Identities = 19/34 (55%), Positives = 24/34 (69%) Frame = +3 Query: 56322 IVCEFLDVFPADLPSMPLDRDIDFCIDVERLLAP 56423 +V EF DVFP +LP MP DRDI+F I++ AP Sbjct: 527 VVDEFPDVFPDELPGMPPDRDIEFIIELLPGTAP 560 Score = 36.4 bits (82), Expect(4) = e-180 Identities = 16/35 (45%), Positives = 24/35 (67%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F+ +M ++F LD FV++F+DDILV Sbjct: 684 FGLTNAPAYFMYMMNKVFMEYLDKFVVVFIDDILV 718 Score = 27.0 bits (58), Expect(4) = e-180 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 37122 IPIVKVCWKHH*VEKATLETEQEMQEQFPSLFE 37024 I + KV W H +AT E E ++++ + LFE Sbjct: 1452 IRMCKVQWNRHSEAEATWEREDDLRKSYSYLFE 1484 Score = 26.6 bits (57), Expect(2) = 6e-005 Identities = 8/30 (26%), Positives = 16/30 (52%) Frame = +2 Query: 66287 YTAFQMTCCVKKWWRDYISSRSVGSPPLSW 66376 Y + Q+ + WW Y ++R + P++W Sbjct: 115 YASGQLQGAAQTWWESYQAARPNNASPVTW 144 Score = 25.4 bits (54), Expect(2) = 4e-004 Identities = 14/39 (35%), Positives = 19/39 (47%) Frame = +1 Query: 53941 RARKMSFITYEAKFRALSRYATNLCFNPQERIWLFVKGL 54057 R M+ Y F L+RYA N ++ LF+KGL Sbjct: 172 RMGSMTVAEYHDTFEQLARYAPNDVREDADKQRLFMKGL 210 >gb|AAF70032.1|AF250878_193 (AF250878) IS2 hypothetical orf [Salmonella typhi] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAB18085.1| (U73857) insertion element IS2 hypothetical 34.4 kD protein (ORF2) [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC77229.1| (AE000498) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC76081.1| (AE000386) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC75899.1| (AE000369) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC75057.1| (AE000291) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC74484.1| (AE000237) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAC73464.1| (AE000143) IS2 hypothetical protein [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAA97169.1| (U14003) IS2 ORF; alternate gene name yi22 [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAA83042.1| (U28375) ORF_f301 [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA97890.1| (AP001918) 100 pct identical to sp:P19777[IS2 hypothetical 34.4kD protein] [Plasmid F] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA16010.1| (D90851) ORF_ID:o373#9~similar to [PIR Accession Number JQ0040] [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA16002.1| (D90850) ORF_ID:o373#9~similar to [PIR Accession Number JQ0040] [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA15819.1| (D90838) ORF_ID:o348#2~similar to [PIR Accession Number JQ0040] [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA15016.1| (D90779) ORF_ID:o267#7~similar to [PIR Accession Number JQ0040] [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA15010.1| (D90778) ORF_ID:o267#7~similar to [PIR Accession Number JQ0040] [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >emb|CAA23541.1| (V00279) ORF 2 (AA 1-301) [Escherichia coli] Length = 301 Score = 629 bits (1604), Expect = e-177 Identities = 300/301 (99%), Positives = 301/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >gb|AAD10297.1| (U82084) unknown [bacteriophage SfX] Length = 301 Score = 626 bits (1596), Expect = e-176 Identities = 299/301 (99%), Positives = 300/301 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLR QAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRIQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 21258 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE 300 Query: 21259 I 21261 I Sbjct: 301 I 301 >dbj|BAA12836.1| (D85613) 37KD protein, similar to YI22-ECOLI [Escherichia coli] Length = 424 Score = 615 bits (1569), Expect = e-173 Identities = 295/303 (97%), Positives = 296/303 (97%) Frame = +1 Query: 20353 KKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHH 20532 KK + LIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHH Sbjct: 122 KKWIAHAPLIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHH 181 Query: 20533 VIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTG 20712 VIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTG Sbjct: 182 VIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTG 241 Query: 20713 RVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLG 20892 RVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLG Sbjct: 242 RVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLG 301 Query: 20893 AVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVK 21072 AVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVK Sbjct: 302 AVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVK 361 Query: 21073 TIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRC 21252 TIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLR ACNGLSDNRC Sbjct: 362 TIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRHGACNGLSDNRC 421 Query: 21253 LEI 21261 LEI Sbjct: 422 LEI 424 Score = 233 bits (588), Expect = 3e-058 Identities = 118/119 (99%), Positives = 119/119 (99%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLL 20383 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPL+ Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLI 131 >gb|AAD22158.1|AF061282_11 (AF061282) polyprotein [Sorghum bicolor] Length = 924 Score = 511 bits (1302), Expect(3) = e-170 Identities = 279/607 (45%), Positives = 378/607 (61%), Gaps = 7/607 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE +LR+VL+ LR +LYAKFSKCEFWL+ VAF GHV++ EG+ VDP KIEA Sbjct: 151 VYSASAEEHEQHLRVVLEKLRQNQLYAKFSKCEFWLEEVAFLGHVLTAEGVAVDPAKIEA 210 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W +P + T++ SF+GL YYRRF+E FS A T+L + F W +C+ SF L Sbjct: 211 VKEWEQPRNATDIRSFLGLAGYYRRFIENFSKIAKPMTNLLKKTNEFEWTPECEQSFQTL 270 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K+ +T+ P+L L F +YCDAS G+ VLM+ G I Y S +LK HE YPT DL Sbjct: 271 KQKLTTTPVLALPDIEKDFVVYCDASKQGLGCVLMQSGKVIAYASLQLKDHEQRYPTHDL 330 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL G + + YTDH SL+ Q DLN R RW+EL+KDY+L I YH Sbjct: 331 ELAAVVHALKIWRHYLIGNKCDIYTDHKSLKYFFTQEDLNMRQRRWLELIKDYNLEIHYH 390 Query: 38632 PGKKNMVAYSLSRKQ*VWVV----YPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAY 38465 PGK N+VA +LSRK + P +C E D+Q + +L+ Sbjct: 391 PGKANVVADALSRKSYCHSLSMEAIPPELCQEMG---DLQLE---------IVPKGLLSE 438 Query: 38464 MGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQ 38285 + +Q L DR R Q + + +++ G + +D G RI VP+ + Sbjct: 439 LRIQYDLEDRIRRAQRGCPEIQEVHERMEGGKCPEFRVDERGTYWCKNRICVPSDEPLRE 498 Query: 38284 LILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGA 38105 ILSEAH+ RY IH G+ KMY DLR+ + W MR DIA V+RC +VK EH R G Sbjct: 499 EILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDIAGHVARCDTCNRVKAEHQRPAGL 558 Query: 38104 FKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARI 37925 K L + EWKW+ I+MDF+ GLP++ KG DSI+VIVD+LTK AHF+PV++++ +LA + Sbjct: 559 LKPLDVPEWKWEGISMDFIVGLPRSPKGHDSIWVIVDRLTKVAHFIPVKTVYRTEQLADL 618 Query: 37924 YIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVL 37745 Y+ ++R HG P SIISDRG Q+ S F + +GTR+D S A+HPQTD Q+E QVL Sbjct: 619 YVDHILRLHGAPTSIISDRGPQWVSRFWQSLHKAIGTRLDYSTAYHPQTDGQTERVNQVL 678 Query: 37744 EDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPR 37565 EDML CVL++G ++ A+F+YN+ + ++IQM F ALYGR CR+ + W + + Sbjct: 679 EDMLRACVLKYGSDWEKSLSHAEFSYNNSYQASIQMSPFEALYGRKCRTPLIWSQVGERA 738 Query: 37564 PRGTDLIQGALEQV 37523 G D I+ A E V Sbjct: 739 FFGPDKIKEAEEGV 752 Score = 304 bits (770), Expect(2) = e-125 Identities = 157/268 (58%), Positives = 189/268 (69%) Frame = +2 Query: 56444 MAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNK 56623 M+ EL ELK QL+EL KG+IRPSA+PWG+ VLFVKKKD S RMCI+YR LN VT+KNK Sbjct: 1 MSVDELEELKKQLKELADKGYIRPSASPWGSPVLFVKKKDGSMRMCIDYRNLNAVTVKNK 60 Query: 56624 YLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLK 56803 Y +P IDD D ++ A FSKIDL SGY Q+KI + +VPKTAF TR G YEF V SFGL Sbjct: 61 YPLPRIDDLLDQLKDAKFFSKIDLRSGYHQMKIRSEDVPKTAFVTRYGQYEFTVVSFGLT 120 Query: 56804 NAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFF 56983 NAPA FM +MN +F L+ FV+VFIDDIL+YS S + LYAKF Sbjct: 121 NAPAYFMNMMNKVFMEELDKFVVVFIDDILVYSASAEEHEQHLRVVLEKLRQNQLYAKFS 180 Query: 56984 KCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VF 57163 KCEF L V+FLGHV++ +GV VD +KIEAVK W +P N +D+ SF+GLA YYRRFI F Sbjct: 181 KCEFWLEEVAFLGHVLTAEGVAVDPAKIEAVKEWEQPRNATDIRSFLGLAGYYRRFIENF 240 Query: 57164 SSIALQLTNLTKQNVPFIWSGECEESFQ 57247 S IA +TNL K+ F W+ ECE+SFQ Sbjct: 241 SKIAKPMTNLLKKTNEFEWTPECEQSFQ 268 Score = 206 bits (518), Expect = 5e-050 Identities = 142/369 (38%), Positives = 200/369 (53%), Gaps = 13/369 (3%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +++ E + VDP KIE +K+W +P + I SFLGLAGYYRR S I+ P Sbjct: 195 VLTAEGVAVDPAKIEAVKEWEQPRNATDIRSFLGLAGYYRRFIENFSKIAKPMTNLLKKT 254 Query: 68537 XXXX*L-SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C + L K + L L + ++Y DAS+ GLGCVLMQ GKV Sbjct: 255 NEFEWTPECEQSFQTLKQKLTTTPVLALP----DIEKDFVVYCDASKQGLGCVLMQSGKV 310 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 +AYAS QLK HE++Y HDLEL VV ALKIW +YL G ++T+H+SL+Y F Q DL Sbjct: 311 IAYASLQLKDHEQRYPTHDLELAAVVHALKIWRHYLIGNKCDIYTDHKSLKYFFTQEDLN 370 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 +R+R WLEL+KDY++ I YHPGK NVVADALS K+ SL+M + L +++ L Sbjct: 371 MRQRRWLELIKDYNLEIHYHPGKANVVADALSRKSY-CHSLSMEAIPPE-LCQEMGDLQL 428 Query: 69074 SFVL--YISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGV 69247 V +SE R+ + R Q ++ ++ +++ + +D G Sbjct: 429 EIVPKGLLSE-------LRIQYDLEDRIRRAQRGCPEIQEVHERMEGGKCPEFRVDERGT 481 Query: 69248 LRIKGHICVPRTGI*LD*TWRRSIV*VT-----LFIQGLLNIYLDLKQHYLCCRMKRDIV 69412 K ICVP D R I+ G +Y DL++ + M++DI Sbjct: 482 YWCKNRICVPS-----DEPLREEILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDIA 536 Query: 69413 DFVSRCLNCQQVKHEHQKPGGV 69478 V+RC C +VK EHQ+P G+ Sbjct: 537 GHVARCDTCNRVKAEHQRPAGL 558 Score = 205 bits (516), Expect = 8e-050 Identities = 112/238 (47%), Positives = 150/238 (62%), Gaps = 9/238 (3%) Frame = +1 Query: 69259 GSYMCS------SDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEK---GHS 69411 G+Y C SD L + E + Y IHP +TK + L + K GH Sbjct: 480 GTYWCKNRICVPSDEPLREEILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDIAGHV 539 Query: 69412 RFCISMFELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNR 69591 C + + A A D +PEWK E I++D +V L R+ D IWVIV+R Sbjct: 540 ARCDTCNRVKAEHQ--RPAGLLKPLD-VPEWKWEGISMDFIVGLPRSPKGHDSIWVIVDR 596 Query: 69592 LTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTR 69771 LTK AHF+PV+T Y ++LA +Y+ I+RLHG SIISDRG +++S FW S+HK +GTR Sbjct: 597 LTKVAHFIPVKTVYRTEQLADLYVDHILRLHGAPTSIISDRGPQWVSRFWQSLHKAIGTR 656 Query: 69772 VDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAP 69951 +D ST +HPQTD Q+E + QVLEDML ACV+ +G+ W++ L EF+YNNSY S +M+P Sbjct: 657 LDYSTAYHPQTDGQTERVNQVLEDMLRACVLKYGSDWEKSLSHAEFSYNNSYQASIQMSP 716 Query: 69952 FEALYGR 69972 FEALYGR Sbjct: 717 FEALYGR 723 Score = 175 bits (438), Expect(2) = e-125 Identities = 91/154 (59%), Positives = 111/154 (71%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F+VYCD S GLG VLM VI YAS QLK HE YPTHDL+LAAVV ALK WRHYL Sbjct: 288 DFVVYCDASKQGLGCVLMQSGKVIAYASLQLKDHEQRYPTHDLELAAVVHALKIWRHYLI 347 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 G KC++YTDH+SL Y FTQ+DLN+R+RRW+EL+KD ++ I YH GKANVVADALSRK Sbjct: 348 GNKCDIYTDHKSLKYFFTQEDLNMRQRRWLELIKDYNLEIHYHPGKANVVADALSRK--- 404 Query: 57664 MGSLAHSQVSRRPLAREVQTLANDFMRLEVLEKG 57765 S HS +S + E+ D ++LE++ KG Sbjct: 405 --SYCHS-LSMEAIPPELCQEMGD-LQLEIVPKG 434 Score = 135 bits (336), Expect(2) = 2e-050 Identities = 89/204 (43%), Positives = 109/204 (52%), Gaps = 11/204 (5%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 FSKIDLRS YHQ+K+R ED+ KTAF TRYG YEF V+ F LTNA A FM++MN F + Sbjct: 79 FSKIDLRSGYHQMKIRSEDVPKTAFVTRYGQYEFTVVSFGLTNAPAYFMNMMNKVFMEEL 138 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG---- 68397 EEHE HLR V L++ +LY KFSKCE WL + + G Sbjct: 139 DKFVVVFIDDILVYSASAEEHEQHLRVVLEKLRQNQLYAKFSKCEFWLE-EVAFLGHVLT 197 Query: 68398 --GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVTF 68556 G D + +R L+ Y +F IA +T L K F Sbjct: 198 AEGVAVDPAKIEAVKEWEQPRNATDIRSFLGLAGYYRRFIENFSKIAKPMTNLLKKTNEF 257 Query: 68557 LWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 W+ ECE SFQ LK LTT +L LP + FVVY Sbjct: 258 EWTPECEQSFQTLKQKLTTTPVLALPDIEKDFVVY 292 Score = 101 bits (250), Expect(3) = e-170 Identities = 57/161 (35%), Positives = 87/161 (53%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEI 37338 +++ LRI QSR +SYAD RR L F V D ++L VSP++G RF GKL+PR++GP+ I Sbjct: 755 VRENLRIAQSRQKSYADNRRRDLEFYVGDHVYLKVSPLRGTFRFHVKGKLAPRFVGPYRI 814 Query: 37337 LRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVI 37158 + G++AY L+LP S +HPVF VS R + + + ++L + L + E V I Sbjct: 815 SKRIGKLAYRLELPEEMSGVHPVFHVSQLRKCLKLPEEEVPIETLDLQETLEYREYPVRI 874 Query: 37157 LARY*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFP 37035 L R + F + + + S R W + +P Sbjct: 875 LDRATKETRSSTFPMCKVLWSNHTEREATWEKESELQLRYP 915 Score = 100 bits (247), Expect = 3e-018 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +3 Query: 57891 IDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDI 58070 +DE G K R+CVP + L IL+EAH SRY IHPG+TKMY DL++ F W M+ DI Sbjct: 476 VDERGTYWCKNRICVPSDEPLREEILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDI 535 Query: 58071 VDFVAQCPNCQQVKYEHQRPGGTLK 58145 VA+C C +VK EHQRP G LK Sbjct: 536 AGHVARCDTCNRVKAEHQRPAGLLK 560 Score = 93.6 bits (229), Expect(2) = 2e-050 Identities = 43/72 (59%), Positives = 56/72 (77%) Frame = +2 Query: 67829 ELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIP 68008 EL+E+K QL++L +K +IR S S WG+P+LFVK+KD M MCIDYR LN +T+ N YP+P Sbjct: 5 ELEELKKQLKELADKGYIRPSASPWGSPVLFVKKKDGSMRMCIDYRNLNAVTVKNKYPLP 64 Query: 68009 RIDDLFD*LQGA 68044 RIDDL D L+ A Sbjct: 65 RIDDLLDQLKDA 76 Score = 38.3 bits (87), Expect(3) = e-170 Identities = 17/41 (41%), Positives = 26/41 (62%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+ F+++M ++F LD FV++F+DDILV E Sbjct: 117 FGLTNAPAYFMNMMNKVFMEELDKFVVVFIDDILVYSASAE 157 >gb|AAD20658.1| (AC006570) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1611 Score = 516 bits (1314), Expect(3) = e-167 Identities = 282/612 (46%), Positives = 390/612 (63%), Gaps = 12/612 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y SW H+ +LR VL+ LR+ L+AK SKC FW +SV F GHV+S +G+ VDP KI + Sbjct: 817 VYSKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRSVGFLGHVISDQGVSVDPEKIRS 876 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RP + TE+ SF+GL YYRRFV F++ A T L +D +F W +C+ SFL+L Sbjct: 877 IKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLEL 936 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K ++T+AP+L L EG +T+Y DAS VG+ VLM++G I Y SR+L+ HE NYPT DL Sbjct: 937 KAMLTNAPVLVLPEEGEPYTVYTDASIVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDL 996 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A +VF L IWR YLYG + + YTDH SL+ I Q +LN R RW+EL+ DY+L I YH Sbjct: 997 EMAAVVFFLKIWRSYLYGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYH 1056 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV- 38456 PGK N VA +LSR++ S V ER +D+ N M L + + +G+ Sbjct: 1057 PGKANQVADALSRRR-------SEVEAERS-QVDL---VNMMGTLHVNALSKEVEPLGLG 1105 Query: 38455 ---QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF----DGVLKFSGRISVPTVG 38297 Q+ L R R L RD+ + G ++ +G + +GR+ VP Sbjct: 1106 AADQADLLSRIR--------LAQERDEEIKGWAQNNKTEYQTSNNGTIVVNGRVCVPNDR 1157 Query: 38296 DSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLR 38117 + IL EAH+ ++SIH G+ KMYRDL+++Y W GM+ D+A +V++C Q VK EH Sbjct: 1158 ALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQV 1217 Query: 38116 SGGAFKRLSISEWKWDRITMDFVAGLPQTSKGV-DSIYVIVDQLTKSAHFLPVQSLFSVV 37940 G + L I EWKWD ITMDFV GLP K ++++V+VD+LTKSAHF+ + Sbjct: 1218 PSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISDKDGAE 1277 Query: 37939 RLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEH 37760 +A YI E+VR HG+PVSI+SDR ++FTS F FQ LGTRV+LS A+HPQTD+QSE Sbjct: 1278 IIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDEQSER 1337 Query: 37759 TIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFE 37580 TIQ LEDML CVL++GG +++ L +FAYN+ F ++I M + ALYGR CR+ + W Sbjct: 1338 TIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTPLCWTP 1397 Query: 37579 SMDPRPRGTDLIQGALEQVRVFKI 37508 + R G ++ E+++ KI Sbjct: 1398 VGERRLFGPTIVDETTERMKFLKI 1421 Score = 326 bits (828), Expect(3) = e-151 Identities = 182/372 (48%), Positives = 235/372 (62%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 L ++G ++ +IS + A+RM+ K C YL T + ++ + IV EF DVF+ Sbjct: 577 LKFQGIRTTSGSLVISAIQAERMLGKGCEAYLATITTKEVGASAELKDIPIVNEFSDVFA 636 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 A VS R + T PIS PYRMAPAE+ +LK QL+ Sbjct: 637 A--------VSGVPPDRSDPFTIE--------LEPGTTPISKAPYRMAPAEMAKLKKQLE 680 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 ELL KGFIRPS++PWGA VLFVKKKD SFR+CI+YR LNKVT+KNKY +P ID+ D + Sbjct: 681 ELLDKGFIRPSSSPWGAPVLFVKKKDGSFRLCIDYRGLNKVTVKNKYPLPRIDELMDQLG 740 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDL SGY Q+ I T+V KTAF TR H+EF+V FGL NAPAAFM +MNG+F Sbjct: 741 GAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYDHFEFVVMPFGLTNAPAAFMKMMNGVF 800 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FI+DIL+YSKS + L+AK KC F SV FLGH Sbjct: 801 RDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRSVGFLGH 860 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 V+S GV VD KI ++K W +P N +++ SF+GLA YYRRF+ F+S+A LT LT ++ Sbjct: 861 VISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKD 920 Query: 57206 VPFIWSGECEESF 57244 F WS ECE+SF Sbjct: 921 TAFNWSDECEKSF 933 Score = 220 bits (556), Expect = 2e-054 Identities = 139/374 (37%), Positives = 204/374 (54%), Gaps = 10/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S + + VDP+KI +IK+W RP + +I SFLGLAGYYRR ++S+ Sbjct: 861 VISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKD 920 Query: 68552 LS------CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + C + + L + L+L + E +Y DAS +GLGCVLMQKG V Sbjct: 921 TAFNWSDECEKSFLELKAMLTNAPVLVLP----EEGEPYTVYTDASIVGLGCVLMQKGSV 976 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 +AYASRQL+ HEK Y HDLE+ VVF LKIW +YLYG ++T+H+SL+YIF Q +L Sbjct: 977 IAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRSYLYGAKVQIYTDHKSLKYIFTQPELN 1036 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 LR+R W+EL+ DY++ I YHPGK N VADALS + + V L++ Sbjct: 1037 LRQRRWMELVADYNLDIAYHPGKANQVADALSRRRSEV----------EAERSQVDLVNM 1086 Query: 69074 SFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILD----SE 69241 L+++ K LG + S+ L + RD+ +K A+ + + Sbjct: 1087 MGTLHVNALSKEVEPLGLGAADQADLLSRI----RLAQERDEEIKGWAQNNKTEYQTSNN 1142 Query: 69242 GVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFV 69421 G + + G +CVP + R + G +Y DLK++Y MK+D+ +V Sbjct: 1143 GTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWV 1202 Query: 69422 SRCLNCQQVKHEHQKPGGVTLRIP 69493 ++C CQ VK EHQ P G+ +P Sbjct: 1203 AKCPTCQLVKAEHQVPSGLLQNLP 1226 Score = 192 bits (484), Expect = 5e-046 Identities = 112/259 (43%), Positives = 155/259 (59%), Gaps = 3/259 (1%) Frame = +1 Query: 69196 QGVKTRSQGCNS***GSFED*GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEA 69375 Q KT Q N+ G+ G +DR L + E + +SIHP + K L+ Sbjct: 1131 QNNKTEYQTSNN---GTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKR 1187 Query: 69376 ALFVLPYEKGHSRFCISM--FELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSR 69549 + +K +R+ +L +E P + IPEWK + I +D V L Sbjct: 1188 YYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLP--IPEWKWDHITMDFVTGLPT 1245 Query: 69550 TL-GKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKF 69726 + K + +WV+V+RLTKSAHF+ + + +A+ YI EIVRLHG+ +SI+SDR T+F Sbjct: 1246 GIKSKHNAVWVVVDRLTKSAHFMAISDKDGAEIIAEKYIDEIVRLHGIPVSIVSDRDTRF 1305 Query: 69727 MSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVE 69906 S FW + K LGTRV+LST +HPQTD QSE IQ LEDML ACV+D+G +W+++L LVE Sbjct: 1306 TSKFWKAFQKALGTRVNLSTAYHPQTDEQSERTIQTLEDMLRACVLDWGGNWEKYLRLVE 1365 Query: 69907 FAYNNSYHLSFEMAPFEALYGR 69972 FAYNNS+ S M+P+EALYGR Sbjct: 1366 FAYNNSFQASIGMSPYEALYGR 1387 Score = 163 bits (408), Expect(3) = e-151 Identities = 92/180 (51%), Positives = 120/180 (66%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GLG VLM + +VI YASRQL+ HE NYPTHDL++AAVVF LK WR YLYG Sbjct: 955 YTVYTDASIVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRSYLYG 1014 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K ++YTDH+SL Y+FTQ +LNLR+RRWMEL+ D ++ I YH GKAN VADALSR+ Sbjct: 1015 AKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKANQVADALSRR---- 1070 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 S ++ S+ L + TL + + EV E G A +A L +I+ Q DE+++ Sbjct: 1071 RSEVEAERSQVDLVNMMGTLHVNALSKEV-EPLGLGAADQA--DLLSRIRLAQERDEEIK 1127 Score = 135 bits (337), Expect(2) = 2e-062 Identities = 71/145 (48%), Positives = 99/145 (67%), Gaps = 1/145 (0%) Frame = +2 Query: 67610 QLVERECLAYMAHIGDTSVETNM-LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLG 67786 +++ + C AY+A I V + L+ I +V+EF +VF + VPPD F I+++ G Sbjct: 598 RMLGKGCEAYLATITTKEVGASAELKDIPIVNEFSDVFAA-VSGVPPDRSDPFTIELEPG 656 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 T PI PYR+ PAE+ ++K QL++LL+K FIR S S WGAP+LFVK+KD +CIDYR Sbjct: 657 TTPISKAPYRMAPAEMAKLKKQLEELLDKGFIRPSSSPWGAPVLFVKKKDGSFRLCIDYR 716 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGA 68044 LNK+T+ N YP+PRID+L D L GA Sbjct: 717 GLNKVTVKNKYPLPRIDELMDQLGGA 742 Score = 133 bits (332), Expect(2) = 2e-062 Identities = 89/210 (42%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G FSKIDL S YHQ+ + D+ KTAF+TRY H+EF+VM F LTNA A FM +MN Sbjct: 739 LGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYDHFEFVVMPFGLTNAPAAFMKMMNG 798 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW-LSVQRR 68388 FR + E H+ HLR V L+E +L+ K SKC W SV Sbjct: 799 VFRDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRSVGFL 858 Query: 68389 YH----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT* 68541 H G D + R + +R L+ Y F S+A LTRLT Sbjct: 859 GHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTG 918 Query: 68542 KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 K+ F WSDECE SF +LK LT A +L LP E E + VY Sbjct: 919 KDTAFNWSDECEKSFLELKAMLTNAPVLVLPEEGEPYTVY 958 Score = 96.7 bits (237), Expect(3) = e-151 Identities = 47/101 (46%), Positives = 63/101 (61%), Gaps = 1/101 (0%) Frame = +3 Query: 57861 GIARRGK-EAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQ 58037 G A+ K E G +++ RVCVP L IL EAH S++SIHPG+ KMY DLK+ Sbjct: 1128 GWAQNNKTEYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKR 1187 Query: 58038 HFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ W M+ D+ +VA+CP CQ VK EHQ P G L+ +P E Sbjct: 1188 YYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPE 1229 Score = 85.8 bits (209), Expect(3) = e-167 Identities = 53/158 (33%), Positives = 79/158 (49%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KLSPRY+GP++++ Sbjct: 1422 KLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIER 1481 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILAR 37149 G VAY+LDLPP +A H VF VS R + D+ + L + +T V I+ R Sbjct: 1482 VGAVAYKLDLPPKLNAFHNVFHVSQLRKCLSDQEESVEDIPPGLKENMTVEAWPVRIMDR 1541 Query: 37148 Y*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFP 37035 + LL+ + + W + K++FP Sbjct: 1542 MTKGTRGKARDLLKVLWNCRGREEYTWETENKMKANFP 1579 Score = 47.6 bits (111), Expect = 0.026 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Frame = +1 Query: 54808 GESVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLA 54987 G+++ + R V+ G N DLII+ + DVILGM WL +DC+ + Sbjct: 512 GQAMYPTGLVRGISVVVNGVNMPADLIIVPLKKHDVILGMDWLGKYKAHIDCHRGRIQFE 571 Query: 54988 KPGTDSLV*EGDYISTPVRIISCLRAKRMVSKGFLDFLSHI-KDDTSKVSLIESLLIVRE 55164 + L +G ++ +IS ++A+RM+ KG +L+ I + + ++ + IV E Sbjct: 572 R-DEGMLKFQGIRTTSGSLVISAIQAERMLGKGCEAYLATITTKEVGASAELKDIPIVNE 630 Query: 55165 MIHSFASV 55188 FA+V Sbjct: 631 FSDVFAAV 638 Score = 39.1 bits (89), Expect(3) = e-167 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ +M +FR LD FVIIF++DILV Sbjct: 783 FGLTNAPAAFMKMMNGVFRDFLDEFVIIFINDILV 817 >gb|AAA69213.1| (U28377) ORF_o282p; orf2 of V00279 [Escherichia coli] Length = 282 Score = 589 bits (1501), Expect = e-165 Identities = 281/282 (99%), Positives = 282/282 (99%) Frame = +1 Query: 20359 VDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 20538 +DSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI Sbjct: 1 MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI 60 Query: 20539 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 20718 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV Sbjct: 61 GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV 120 Query: 20719 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 20898 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV Sbjct: 121 AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV 180 Query: 20899 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 21078 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI Sbjct: 181 ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI 240 Query: 21079 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPR 21204 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPR Sbjct: 241 KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPR 282 >emb|CAB75481.1| (AL138657) copia-like polyprotein [Arabidopsis thaliana] Length = 1363 Score = 309 bits (782), Expect(4) = e-164 Identities = 199/616 (32%), Positives = 323/616 (52%), Gaps = 25/616 (4%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +MSEN S+ +I+EF IV+ L ++++ DE +A++L+ SLP+ +D + + S Sbjct: 122 LYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLKYS 181 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDS-SGSALSVN*RRRSKTKGQINMVDQNQRIEEN 6438 G L DE+ + S+ + V+ S G A + + +++ +G+ D+ + Sbjct: 182 SGKTVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGLYVKDKAENRGRSEQKDKGKGKRSK 241 Query: 6437 LRTDQT*LV*IVEKNDTFGRAIQSQRRNRIKN--------------LEMTMIL*IQQRTL 6300 ++ + I ++ ++ + + KN L + ++ + Sbjct: 242 SKSKRG--CWICGEDGHLKSTCPNKNKPQFKNQGSNKGESSGGKGNLVEGSVNFVESAGM 299 Query: 6299 GML*FLV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGD 6126 + L T + WI+ + H + +E ++F G V + + ++G G Sbjct: 300 FVSEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGT 359 Query: 6125 VCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTN 5946 V I TL +VRYIP + +NL+S+G F+ G+ G +I G V+ G Sbjct: 360 VRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENGMLRIKSGNQVLLEGRR 419 Query: 5945 SGTLYTTLGCINMD---VVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGL 5775 TLY G D VA + + LWH RL HMS K M +L+ KG L+ K + Sbjct: 420 YDTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSLLIKKGFLDKKKVSMLDT 479 Query: 5774 CESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRKV 5598 CE C+ G+ K++ F + K L+ H+D+WG P+ SLG +++++FI D++RKV Sbjct: 480 CEDCIYGRAKKIGFNLAQHDT-KKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKV 538 Query: 5597 WVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRA 5418 WVYFLK + F F W + VENQS +VK LR+DNG E+ F FC KG + R Sbjct: 539 WVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRT 598 Query: 5417 VPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKIL 5238 +QNG+ ERMN+ + E RSM + G+PK FWA T LIN+ P + F+ Sbjct: 599 CAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFP 658 Query: 5237 EEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNR 5058 ++ W K YS+LR +GC T+VH D KLN++A K LIGY S + GY+ W + + Sbjct: 659 DKRWSGKAPIYSYLRRYGCVTFVHTD---GGKLNLRAKKGVLIGYPSGVKGYKVWLIEEK 715 Query: 5057 KILRHCDVTFDESVMYKD----KEQKVLEITKQVGVEVELE 4947 K + +V+F E+ +YKD KEQ E G ++L+ Sbjct: 716 KCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLD 756 Score = 203 bits (512), Expect(4) = e-164 Identities = 119/257 (46%), Positives = 168/257 (65%), Gaps = 13/257 (5%) Frame = -2 Query: 4920 DTQPTPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHY---LLLIDEG---EPESFDEAL 4759 D + T +S ++ V R R IRAP R+ +Y L ++G EP + EA+ Sbjct: 793 DIEETDVHQSP-LSYHLVRDRERREIRAPRRFDDEDYYAEALYTTEDGDAVEPADYKEAV 851 Query: 4758 QVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG--KRRFKAH 4585 + E+ KW LAM++E+ S KNDTW P +R + ++W+++ K G + RFKA Sbjct: 852 RDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKAR 911 Query: 4584 LVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIY 4417 LV KG A DY EIF+PVVK SIRILL IVA EN+ LEQ+D KT FLHG+L ++IY Sbjct: 912 LVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEKIY 971 Query: 4416 MQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKY 4237 M P+G KE+ VC L +SLYGLKQAPRQW +KF+ +MT+ F +++ D C Y KK Sbjct: 972 MMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKL 1031 Query: 4236 T-NSYVFLLLYLDDMLIEGSSMRENNNLDK 4150 + +S ++LL Y+DDML+ ++M+ + L K Sbjct: 1032 SDDSTMYLLFYVDDMLVAANNMQAIDALKK 1061 Score = 93.6 bits (229), Expect(2) = 3e-037 Identities = 47/118 (39%), Positives = 71/118 (59%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG IS S Q VA S+ E EY++ + +W+K L DFG + + V IFCD+ S Sbjct: 1235 LGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQS 1294 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN V H+RTKH+D++ HF+R+ + G++ ++ + E+ ADIFT L F+ Sbjct: 1295 AIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQ 1352 Score = 92.4 bits (226), Expect(4) = e-164 Identities = 49/103 (47%), Positives = 63/103 (60%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKDLG AK+ILG++I DR A L LSQE Y+ KVL F + ++KP TPL H Sbjct: 1063 LSIKFEMKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAH 1122 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 K+ K E +M VPY+ A+ S++ M+ TRPD Y Sbjct: 1123 LKMKSATEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAY 1165 Score = 91.3 bits (223), Expect(2) = 3e-037 Identities = 49/132 (37%), Positives = 78/132 (58%), Gaps = 12/132 (9%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL-----------YRG 87726 W+ Q+ Y+ ++LK F M ++K TP+ K+ S E+KL Y Sbjct: 1093 WLSQESYLNKVLKTFNMLESKPALTPLGAHLKMK-----SATEEKLSTEEEYMNSVPYSS 1147 Query: 87725 MIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSN 87549 +GS++Y + +RPD+ + VG+ +RF + P + H VK +L Y+KGT D + Y + S+ Sbjct: 1148 AVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSD 1207 Query: 87548 FDLVGYADVDYVGYLVDRKSTTGM 87477 F + GY D DY L R+S TG+ Sbjct: 1208 FSICGYCDADYAADLDKRRSITGL 1231 Score = 88.9 bits (217), Expect(3) = 2e-027 Identities = 50/130 (38%), Positives = 72/130 (54%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VER ++ ++E R++L S LP R+W E T LIN+ S ++ + + Sbjct: 601 YTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDK 660 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P YSYL+ +GC+ F +++ K R + +GYP GYKV KK Sbjct: 661 RWSGKAPIYSYLRRYGCVTF--VHTDGGKLNLRAKKGVLIGYPSGVKGYKVWLIEEKKCV 718 Query: 65343 VSRDVSFYEN 65372 VSR+VSF EN Sbjct: 719 VSRNVSFQEN 728 Score = 68.3 bits (164), Expect = 2e-008 Identities = 62/226 (27%), Positives = 91/226 (39%), Gaps = 5/226 (2%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEH----SI 88399 + +W MD+ C HMT + +E +++ ++ Sbjct: 313 EDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTL 372 Query: 88398 DKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTST 88219 V Y+ + NLLS+ +K G+ I Q L L G+R +Y + Sbjct: 373 QNVRYIPDMDRNLLSLGTF-EKAGHKFESENGMLRIKSGNQVL-LEGRRYDTLYILHGKP 430 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 D+ L ++ D +LWH+RL H SQ ++ LI K L K K CE C G Sbjct: 431 ATDESLA-VARANDDTVLWHRRLCHMSQKNMSLLIKKGF---LDKKKVSMLDTCEDCIYG 486 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTR 87889 + K F Q + LE +H DL G P S G Y +DDYTR Sbjct: 487 RAKKIGFNLAQH-DTKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTR 536 Score = 60.5 bits (144), Expect(3) = 2e-027 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%) Frame = +1 Query: 64546 RPCVLYQNERNLLYSYILLTKKTF-----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLR 64710 R C + Q +LL L KK C C+ +G+ I F + + + + + Sbjct: 451 RLCHMSQKNMSLLIKKGFLDKKKVSMLDTCEDCI-YGRAKKIGFNLAQHDTKKKL-EYVH 508 Query: 64711 LDLW-EPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTI 64887 DLW P ++ +YF+ +DD++R W L K + S++SLV NQ + Sbjct: 509 SDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERV 568 Query: 64888 KSIRTYNGLEFISHETNIYLKKK 64956 K++RT NGLEF + + + ++K Sbjct: 569 KTLRTDNGLEFCNRMFDGFCEEK 591 Score = 46.9 bits (109), Expect(4) = e-164 Identities = 32/108 (29%), Positives = 61/108 (55%), Gaps = 18/108 (16%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQIEDYL-----------------YQKDLHESLTGVKPK 6977 M +++E+EKFDG D+ +WK ++ ++ ++D +S K + Sbjct: 1 MSGARIEVEKFDGRGDYTMWKEKLLAHIDMLGLSAVLRESETPMGKERDSEKSDEDEKEE 60 Query: 6976 SMTEEKWKLKDR*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVYLMR 6797 E ++ K R A I L++S V I KE + + +L+AL +Y + N++YL + Sbjct: 61 REKMEAFEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQ 120 Query: 6796 RCSIYK 6779 + +K Sbjct: 121 KLYSFK 126 Score = 37.9 bits (86), Expect(2) = 0.60 Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 3/149 (2%) Frame = -1 Query: 90160 KNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFK 89981 K KA+ +V + +I TSA + + L + + + + +FK Sbjct: 70 KKRKARSTIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQ---KLYSFK 126 Query: 89980 MKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTN 89801 M S++ I F ++ +L +L + + E+Q +L P+ ++ ++ + T Sbjct: 127 MSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLKYSSGKTV 186 Query: 89800 MTLDELVRNLKTYEM---NVDKRGEGNKENFF 89714 ++LDE+ + + E+ +V K +G E + Sbjct: 187 LSLDEVAAAIYSRELEFGSVKKSIKGQAEGLY 218 Score = 23.9 bits (50), Expect(2) = 0.60 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = -2 Query: 89595 KEKNPERSQNGGCFKCGKTDHQIKDCP 89515 K K + GC+ CG+ H CP Sbjct: 236 KGKRSKSKSKRGCWICGEDGHLKSTCP 262 Score = 22.7 bits (47), Expect(3) = 2e-027 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +2 Query: 64502 MSHGNSTDYLWHNRLGHVS 64558 ++ N LWH RL H+S Sbjct: 438 VARANDDTVLWHRRLCHMS 456 >gb|AAD22339.1|AC006955_25 (AC006955) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1411 Score = 476 bits (1213), Expect(3) = e-156 Identities = 269/613 (43%), Positives = 377/613 (60%), Gaps = 9/613 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 675 VYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLGHIVSAEGVSVDPEKIEA 734 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+ L YYRRFV+GF++ A T L +DV F+W +C+ F+ L Sbjct: 735 IRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 794 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DAS VG+ VLM++G I Y SR+L+ HE NYPT DL Sbjct: 795 KEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDL 854 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+AV++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 855 EMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQPELNLRQMRWMELVADYDLEIAYH 914 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAY--MG 38459 PGK N+VA +LSRK+ G+ AL + A +RL CV+A +G Sbjct: 915 PGKANVVADALSRKR------VGAAPGQSVEALVSEIGA---LRL------CVVAREPLG 959 Query: 38458 VQ----SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDS 38291 ++ + L R R Q +D L++ +G + +G + GR+ VP + Sbjct: 960 LEAVDRADLLTRARLAQEKDEGLIA----ASKAEGSEYQFAANGTIFVYGRVCVPKDEEL 1015 Query: 38290 IQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSG 38111 + ILSEAH +SIH G KMYRDL+++Y W GM+ D+A++V+ C Q VK EH Sbjct: 1016 RREILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEH---- 1071 Query: 38110 GAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLA 37931 + D+I+VI+D+LTKSAHFL ++ LA Sbjct: 1072 ----------------------------QVPDAIWVIMDRLTKSAHFLAIRKTDGAAVLA 1103 Query: 37930 RIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQ 37751 + Y+ E+V+ HGVPVSI+SDR S+FT F FQ ++GT+V +S A+HPQTD QSE TIQ Sbjct: 1104 KKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTDGQSERTIQ 1163 Query: 37750 VLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMD 37571 LEDML +CVL++GG L +FAYN+ + ++I M F ALYGR C + + W + + Sbjct: 1164 TLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTPLRWTQVEE 1223 Query: 37570 PRPRGTDLIQGALEQVRVFKID 37505 G D +Q E++RV K++ Sbjct: 1224 RSIYGADYVQETTERIRVLKLN 1245 Score = 332 bits (843), Expect(3) = e-152 Identities = 179/372 (48%), Positives = 239/372 (64%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 LV++G ++ +IS + AK+M+ K C YL+ ++ ++ + +++EF DVF Sbjct: 435 LVYQGVRPTSGSLVISAVQAKKMIEKGCEAYLVTISMPESLGQVAVSDIRVIQEFEDVFQ 494 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 + L SR F T P+S PYRMAPAE+ ELK QL+ Sbjct: 495 S---LQGLPPSRSDP-------------FTIELEPGTAPLSKAPYRMAPAEMTELKKQLE 538 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 +LLGKGFIRPS +PWGA VLFVKKKD SFR+CI+YR LN VT+KNKY +P ID+ D ++ Sbjct: 539 DLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLR 598 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDLTSGY Q+ I +V KTAF TR GH+EF+V F L NAPAAFM LMN +F Sbjct: 599 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSVF 658 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FIDDIL+YSKS + + L+AK KC F + FLGH Sbjct: 659 QEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLGH 718 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 +VS +GV VD KIEA++ W +PTN +++ SF+ L YYRRF+ F+S+A +T LT ++ Sbjct: 719 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGKD 778 Query: 57206 VPFIWSGECEESF 57244 VPF+WS ECEE F Sbjct: 779 VPFVWSPECEEGF 791 Score = 230 bits (580), Expect = 3e-057 Identities = 150/379 (39%), Positives = 216/379 (56%), Gaps = 26/379 (6%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + +I SFL L GYYRR + + Sbjct: 719 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGKD 778 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY ++Y DAS++GLGCVLMQ+G Sbjct: 779 VPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPY------MVYTDASRVGLGCVLMQRG 832 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL+ HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIFNQ + Sbjct: 833 KVIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQPE 892 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV-------------SMGSLAMLQ 69028 L LR+ W+EL+ DYD+ I YHPGK NVVADALS K V +G+L + Sbjct: 893 LNLRQMRWMELVADYDLEIAYHPGKANVVADALSRKRVGAAPGQSVEALVSEIGALRLCV 952 Query: 69029 VSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLK 69208 V++ PL ++ + + +L + +Q+ D+G + K Sbjct: 953 VAREPLG--LEAVDRADLLTRAR------------------LAQEKDEGLIA-----ASK 987 Query: 69209 REAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV---*VTLFI--QGLLNIYLDLK 69373 E + G + + G +CVP+ D RR I+ ++F G +Y DLK Sbjct: 988 AEGSEYQFAANGTIFVYGRVCVPK-----DEELRREILSEAHASMFSIHPGATKMYRDLK 1042 Query: 69374 QHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIPYLSGS 69508 ++Y MKRD+ ++V+ C CQ VK EHQ P + + + L+ S Sbjct: 1043 RYYQWVGMKRDVANWVAECDVCQLVKAEHQVPDAIWVIMDRLTKS 1087 Score = 176 bits (443), Expect = 3e-041 Identities = 101/238 (42%), Positives = 129/238 (53%) Frame = +1 Query: 69259 GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFEL 69438 G D +L R + E ++ +SIHP ATK L+ Sbjct: 1005 GRVCVPKDEELRREILSEAHASMFSIHPGATKMYRDLKRYY------------------- 1045 Query: 69439 SASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVP 69618 W D + W +EC +V + D IWVI++RLTKSAHF+ Sbjct: 1046 ---------QWVGMKRD-VANWVAECDVCQLVKAEHQVP---DAIWVIMDRLTKSAHFLA 1092 Query: 69619 VQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHP 69798 ++ T LAK Y+ EIV+LHGV +SI+SDR +KF FW + ++GT+V +ST +HP Sbjct: 1093 IRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHP 1152 Query: 69799 QTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 QTD QSE IQ LEDML CV+D+G HW L LVEFAYNNSY S MAPFEALYGR Sbjct: 1153 QTDGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQASIGMAPFEALYGR 1210 Score = 165 bits (413), Expect(3) = e-152 Identities = 90/164 (54%), Positives = 112/164 (67%), Gaps = 15/164 (9%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL+ HE NYPTHDL++A V+FALK WR YLYG Sbjct: 813 YMVYTDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYG 872 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 K +V+TDH+SL Y+F Q +LNLR+ RWMEL+ D D+ I YH GKANVVADALSRK Sbjct: 873 GKVQVFTDHKSLKYIFNQPELNLRQMRWMELVADYDLEIAYHPGKANVVADALSRKRVGA 932 Query: 57655 ---------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK--GGFFACVEARSS 57798 V +G+L V+R PL E A+ R + ++ G A +A S Sbjct: 933 APGQSVEALVSEIGALRLCVVAREPLGLEAVDRADLLTRARLAQEKDEGLIAASKAEGS 991 Score = 134 bits (335), Expect(2) = 2e-062 Identities = 69/147 (46%), Positives = 98/147 (65%), Gaps = 1/147 (0%) Frame = +2 Query: 67607 RQLVERECLAYMAHIG-DTSVETNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDL 67783 ++++E+ C AY+ I S+ + I V+ EF +VF + L +PP F I+++ Sbjct: 455 KKMIEKGCEAYLVTISMPESLGQVAVSDIRVIQEFEDVFQS-LQGLPPSRSDPFTIELEP 513 Query: 67784 GTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDY 67963 GT P+ PYR+ PAE+ E+K QL+DLL K FIR S S WGAP+LFVK+KD +CIDY Sbjct: 514 GTAPLSKAPYRMAPAEMTELKKQLEDLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDY 573 Query: 67964 RQLNKITIIN*YPIPRIDDLFD*LQGAS 68047 R LN +T+ N YP+PRID+L D L+GA+ Sbjct: 574 RGLNWVTVKNKYPLPRIDELLDQLRGAT 601 Score = 134 bits (334), Expect(2) = 2e-062 Identities = 86/208 (41%), Positives = 113/208 (53%), Gaps = 13/208 (6%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ+ + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 599 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSVF 658 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY-- 68391 +++ EEHE HLR V L+E+KL+ K SKC W QR Sbjct: 659 QEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFW---QREIGF 715 Query: 68392 ------HGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT 68538 G D + ++ +R L+ Y F S+A +T+LT Sbjct: 716 LGHIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLT 775 Query: 68539 *KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 K+V F+WS ECE F LK LT+ +L LP + ++VY Sbjct: 776 GKDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPYMVY 816 Score = 93.6 bits (229), Expect(3) = e-152 Identities = 42/85 (49%), Positives = 58/85 (67%) Frame = +3 Query: 57876 GKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSR 58055 G E G + + RVCVP+ ++L IL+EAH+S +SIHPGATKMY DLK+++ W Sbjct: 990 GSEYQFAANGTIFVYGRVCVPKDEELRREILSEAHASMFSIHPGATKMYRDLKRYYQWVG 1049 Query: 58056 MQHDIVDFVAQCPNCQQVKYEHQRP 58130 M+ D+ ++VA+C CQ VK EHQ P Sbjct: 1050 MKRDVANWVAECDVCQLVKAEHQVP 1074 Score = 86.6 bits (211), Expect(3) = e-156 Identities = 56/164 (34%), Positives = 80/164 (48%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q+R +SYAD RR L F V DR++L ++ ++G R KLSPRY+GPF I+ Sbjct: 1246 MKEAQARQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSILETKLSPRYMGPFRIVERV 1305 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+LP A H VF V M R + + VL +L +T V +L R Sbjct: 1306 GPVAYRLELPDVMRAFHKVFHVLMLRKCLHKDDEVLVKIPEDLQPNMTLEARPVRVLERR 1365 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + R+ L++ + W P R K+ F QV Sbjct: 1366 IKELRRKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQV 1409 Score = 48.0 bits (112), Expect = 0.020 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Frame = +1 Query: 54787 IHVSTHVGESVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCN 54966 +HV G+ + V + + G + DLII + +DVILGM WL LDC+ Sbjct: 363 LHVKVAGGQFLAVLGRAKGVDIQIAGESMPADLIISPVELYDVILGMDWLDHYRVHLDCH 422 Query: 54967 AKTVTLAKPGTDSLV*EGDYISTPVRIISCLRAKRMVSKGFLDFLSHIKDDTSKVSL-IE 55143 V+ +P LV +G ++ +IS ++AK+M+ KG +L I S + + Sbjct: 423 RGRVSFERP-EGRLVYQGVRPTSGSLVISAVQAKKMIEKGCEAYLVTISMPESLGQVAVS 481 Query: 55144 SLLIVREMIHSFASV 55188 + +++E F S+ Sbjct: 482 DIRVIQEFEDVFQSL 496 Score = 45.7 bits (106), Expect = 0.10 Identities = 48/187 (25%), Positives = 71/187 (37%), Gaps = 1/187 (0%) Frame = -3 Query: 40925 APVAAPDLYALLTQLLEAIGQMRQAPAPALQGNPVVAAPEV*SSLVHVAALPNLEVRGML 40746 A V L LL QLLE + + AP AP + + V A EV L Sbjct: 75 AQVPEVGLAGLLRQLLERLPGVVPVEAPV--------APRM--AEVQQRAAVAEEVPSYL 124 Query: 40745 LRE*KMIGVFQRLAPSIFS-GAIGEDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPA 40569 +M+ QR+ FS G E+A ++ S D H G A Sbjct: 125 ----RMMEQLQRIGTWYFSSGTSPEEADSWRSRVQRNFGSSRCPAEYRVDLAVHFLEGDA 180 Query: 40568 RQWWRTY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEAR 40389 WWR+ R +SW+ F F +++ P+ R+ F L G ++ EY+ Sbjct: 181 HLWWRSVTARRR--QADMSWADFVAEFNAKYFPQEALDRMEARFLELTQGEWSVREYDRE 238 Query: 40388 FHEFSRHA 40365 F+ +A Sbjct: 239 FNRLLAYA 246 Score = 41.4 bits (95), Expect = 2.0 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = +2 Query: 53759 FGVEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLS 53938 + V+ + + DA +WW+S + R M+WA F + F KY P DR FL Sbjct: 167 YRVDLAVHFLEGDAHLWWRSVTARR--RQADMSWADFVAEFNAKYFPQEALDRMEARFLE 224 Query: 53939 LEQG 53950 L QG Sbjct: 225 LTQG 228 Score = 40.6 bits (93), Expect(3) = e-156 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 641 FALTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 675 >gb|AAF07358.1|AC011665_17 (AC011665) transposase-like protein (TnpF); 32286-33077 [Arabidopsis thaliana] Length = 263 Score = 554 bits (1413), Expect = e-155 Identities = 263/263 (100%), Positives = 263/263 (100%) Frame = +1 Query: 20473 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQ 20652 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQ Sbjct: 1 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQ 60 Query: 20653 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL 20832 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL Sbjct: 61 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL 120 Query: 20833 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE 21012 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE Sbjct: 121 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE 180 Query: 21013 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY 21192 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY Sbjct: 181 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY 240 Query: 21193 RSPREYLRQRACNGLSDNRCLEI 21261 RSPREYLRQRACNGLSDNRCLEI Sbjct: 241 RSPREYLRQRACNGLSDNRCLEI 263 >gb|AAD44739.1|AF141323_10 (AF141323) TnpF [Shigella flexneri] Length = 263 Score = 554 bits (1411), Expect = e-154 Identities = 262/263 (99%), Positives = 263/263 (99%) Frame = +1 Query: 20473 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQ 20652 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYR+MRQ Sbjct: 1 MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQ 60 Query: 20653 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL 20832 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL Sbjct: 61 NALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREAL 120 Query: 20833 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE 21012 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE Sbjct: 121 HWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE 180 Query: 21013 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY 21192 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY Sbjct: 181 PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGY 240 Query: 21193 RSPREYLRQRACNGLSDNRCLEI 21261 RSPREYLRQRACNGLSDNRCLEI Sbjct: 241 RSPREYLRQRACNGLSDNRCLEI 263 >emb|CAA37924.1| (X53976) orf 2 [Arabidopsis thaliana] Length = 1084 Score = 296 bits (749), Expect(3) = e-151 Identities = 197/600 (32%), Positives = 319/600 (52%), Gaps = 17/600 (2%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M+++ S+++++NEF IV++L+S++IN +E++A++ ++ L + + + Sbjct: 39 YSFKMNDSKSINENVNEFLKIVAELSSLEINVVEEVRAILFLNGLSSRYSQLKHTLKY-- 96 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRD------SSGSALSVN*RRRSKTKGQI-NMVDQNQ 6453 G++ L ++DV+ S +RE+ + ++ + L N R R +T+ Q N Q + Sbjct: 97 GNKALS---LQDVISSARSLERELDEQKETDKNTSTVLYTNERGRPQTRNQNQNKEGQGR 153 Query: 6452 RIEE-NLRTDQT*LV*IVE---KNDTFGRAIQSQRRNRIKNLEMTMIL*IQQRTLGML*F 6285 I + N T E K D F R + + N + +T L + Sbjct: 154 GISKSNSNAKLTCWYCKKEGHVKKDCFARKRKLESENPGEAGVITEKLVFSEA------- 206 Query: 6284 LV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKT 6111 L L W+L SH S K+ F NF+ + L D+ +++ +G+G + I T Sbjct: 207 LSVNDLAVRDIWVLDSGCTSHMSARKDWFCNFRKDGGTTILLGDDHSVKSQGQGSIKIDT 266 Query: 6110 TLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLY 5931 L++V+Y+P +++NLIS G D GY G G + K RG LY Sbjct: 267 HGGTITVLENVKYVPELRRNLISTGTLDKRGYKHEGGDGKVRYFKNQKTALRGEIVNGLY 326 Query: 5930 TTLG--CINMDVVAESVSGSC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCV 5760 G ++ VAE G LWH+RLGHM MK+L KG + + ++ CE+CV Sbjct: 327 ILDGNTILSETCVAEGSKGKTELWHSRLGHMGLNNMKVLAGKGLVSKEEIRELDFCENCV 386 Query: 5759 MGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVS-SLGGSRFYVTFIYDFSRKVWVYFL 5583 MGK K+VSF + +L H D+WG + V+ SL G++++++ I D +RKVW+YFL Sbjct: 387 MGKAKKVSFNMGKHNS-EYVLSYVHADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLYFL 445 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 + + F F + K VENQ + KVK LR+DNG E+ F A+C GI Sbjct: 446 RSKDETFDRFCERKELVENQQNKKVKCLRTDNGLEFCNLKFDAYCKDHGIERHMTCTYTP 505 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 +QNG+ +RMN+ + E R M G+ + FWA +T AYLI+R P+ + + EE+W+ Sbjct: 506 QQNGVADRMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLISRSPASAIDHNVPEELWL 565 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 K+ Y HLR FG YVH+D + KL +A+K IGY S GY+ W + +K + Sbjct: 566 NKKPGYKHLRRFGSIAYVHID---QGKLKPRALKGIFIGYPSGTKGYKIWLLEEQKCVIS 622 Query: 5042 CDVTFDESVMYKDKEQK 4992 +V F E ++YKD +K Sbjct: 623 RNVLFHEELVYKDTIEK 639 Score = 209 bits (526), Expect(3) = e-151 Identities = 117/267 (43%), Positives = 173/267 (63%), Gaps = 20/267 (7%) Frame = -2 Query: 4947 EE*PINVEADTQPTP------TEESEEVTREQVLR-RSSRTIRAPDRYSH------SLHY 4807 EE +V+ + +P P T+ + + Q++R R R I P R++ +L Sbjct: 678 EESDESVDEEQEPEPQVELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVT 737 Query: 4806 LLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFR 4627 + + EP+S+ EA ++ KW+LA +E SL KN TWVL D P ++ + +W+F+ Sbjct: 738 VETLSMEEPQSYQEATSDKEWKKWKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFK 797 Query: 4626 IKT*PDGKR--RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQM 4465 +K+ G R+KA LV KG DY EIF+PV K TSIRIL+ +V +++ LEQM Sbjct: 798 MKSGIPGVEPVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQM 857 Query: 4464 DEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKS 4285 D KT FLHG+L++E+YM+QP GF+ E+ VC L +SLYGLKQ+PRQW K+F FM Sbjct: 858 DVKTTFLHGELEEELYMEQPDGFISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQ 917 Query: 4284 EFCKAEKDPCCYFKKY-TNSYVFLLLYLDDMLIEGSSMRENNNLDKV 4147 F ++E D C Y K+ +++LLLY+DDMLI G S E N ++++ Sbjct: 918 NFIRSEHDACVYVKQAGEQDHLYLLLYVDDMLIAGKSKSEINKVEQL 964 Score = 86.6 bits (211), Expect(3) = 6e-027 Identities = 44/131 (33%), Positives = 73/131 (55%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG +R ++ ++E R +L +S L +W E T YLI+R S + + + Sbjct: 503 YTPQQNGVADRMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLISRSPASAIDHNVPEE 562 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + NK P Y +L+ FG + + ++ + K +PR IF+GYP T GYK+ +K Sbjct: 563 LWLNKKPGYKHLRRFGSIAY--VHIDQGKLKPRALKGIFIGYPSGTKGYKIWLLEEQKCV 620 Query: 65343 VSRDVSFYENV 65375 +SR+V F+E + Sbjct: 621 ISRNVLFHEEL 631 Score = 83.9 bits (204), Expect(3) = e-151 Identities = 45/106 (42%), Positives = 63/106 (58%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKD+GPA +ILG+ I RDR L +SQ YI V+ RF + +AK +P+ Sbjct: 963 QLSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQARYIHNVVQRFNMAEAKVTRSPIGA 1022 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYL 3834 HFKL+ + + N VPYA A+ S++ M+ TRPD Y + Sbjct: 1023 HFKLAAVRDDDECIDNND---VPYASAVGSIMYAMIGTRPDLAYVI 1065 Score = 65.2 bits (156), Expect = 1e-007 Identities = 68/238 (28%), Positives = 96/238 (39%), Gaps = 11/238 (4%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS-----IDK 88393 W +DS C+ HM+ K F + + + D H ++ Sbjct: 218 WVLDSGCTSHMSARKDWFCNFRK-DGGTTILLGDDHSVKSQGQGSIKIDTHGGTITVLEN 276 Query: 88392 VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 V YV L NL+S L DK G +V QK L G+ +Y +D +TI Sbjct: 277 VKYVPELRRNLISTGTL-DKRGYKHEGGDG-KVRYFKNQKTALRGEIVNGLYILDGNTIL 334 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + V K LWH RL H + L K LV K + +E CE C +GK Sbjct: 335 SETCVAEGSKGKTE-LWHSRLGHMGLNNMKVLAGKGLV---SKEEIRELDFCENCVMGKA 390 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRV-QSRGEKIYVFVLVDDYTRNT*RYM----- 87871 K SF + +S L +H DL G V S Y ++DD TR Y Sbjct: 391 KKVSFNMGKH-NSEYVLSYVHADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLYFLRSKD 449 Query: 87870 DSSAKICQR 87844 ++ + C+R Sbjct: 450 ETFDRFCER 458 Score = 57.0 bits (135), Expect(3) = 6e-027 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTH-NGYKYFLMIVDDFSR 64791 FC +C+ G+ + F + +S + DLW +V +G KYFL I+DD +R Sbjct: 381 FCENCVM-GKAKKVSFNM-GKHNSEYVLSYVHADLWGSTNVTPSLSGNKYFLSIIDDKTR 438 Query: 64792 STWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLK 64950 W L K T LV NQ +K +RT NGLEF + + + Y K Sbjct: 439 KVWLYFLRSKDETFDRFCERKELVENQQNKKVKCLRTDNGLEFCNLKFDAYCK 491 Score = 44.5 bits (103), Expect = 0.23 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Frame = -3 Query: 87863 QQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQKLYRGMIGSLLY-L 87702 Q +Y+ +++RF M +AK +PI KL D E I + Y +GS++Y + Sbjct: 997 QARYIHNVVQRFNMAEAKVTRSPIGAHFKLAAVRDDDECIDNN--DVPYASAVGSIMYAM 1054 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVK 87612 +RPD+ + + L +R+ P H +AVK Sbjct: 1055 IGTRPDLAYVICLVSRYMARPGNIHWEAVK 1084 Score = 41.0 bits (94), Expect = 2.6 Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 2/146 (1%) Frame = -1 Query: 90130 CGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQDM 89951 C + D + C SA ++W+TL + T+ + + ++ +FKM KS+ + Sbjct: 1 CSIEKDRY-----CKSAAEMWETLNKQYMETSLPNRIYVQ---LKFYSFKMNDSKSINEN 52 Query: 89950 ITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTN--MTLDELVR 89777 + F ++ EL SL E+V +L F + + ++ N ++L +++ Sbjct: 53 VNEFLKIVAELSSL--EINVVEEVRAIL--FLNGLSSRYSQLKHTLKYGNKALSLQDVIS 108 Query: 89776 NLKTYEMNVDKRGEGNKENFFGLKSTEQ 89693 + ++ E +D++ E +K L + E+ Sbjct: 109 SARSLERELDEQKETDKNTSTVLYTNER 136 Score = 27.0 bits (58), Expect(3) = 6e-027 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +2 Query: 64496 SCMSHGNS-TDYLWHNRLGHVSFIKMK 64573 +C++ G+ LWH+RLGH+ MK Sbjct: 337 TCVAEGSKGKTELWHSRLGHMGLNNMK 363 >emb|CAB78169.1| (AL161517) putative retrotransposon [Arabidopsis thaliana] Length = 1230 Score = 275 bits (696), Expect(4) = e-148 Identities = 189/601 (31%), Positives = 299/601 (49%), Gaps = 23/601 (3%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +M EN SV +I+EF +++ L + ++ DE +A++L+ SLP+ +D + + Sbjct: 120 LYSYKMQENLSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYG 179 Query: 6614 RGSEKLKFDEIRDVVLSKSIR----KREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRI 6447 G L DE+ + SK + K+ +R G A + + + +T+G ++ + Sbjct: 180 SGRTTLSVDEVVAAIYSKELELGSNKKSIR---GQAEGLYVKDKPETRGMSEQKEKGNKG 236 Query: 6446 EENLRTDQT*LV*IVEKNDTFGRAIQSQRRNRIKNLEMTM-----IL*IQQRTLGML*FL 6282 R+ I + F + ++ + + K + I+ T + Sbjct: 237 RSRSRSKGWKGCWICGEEGHFKTSCPNKGKQQNKGKDQASGSKGEAATIKGNTSEGSGYY 296 Query: 6281 V*TAL----LNHGF-WIL-----VHLSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGK 6132 V AL +N G W++ H++H KE F+ G V + + + Sbjct: 297 VSEALHSTDVNLGNEWVMDTGCNYHMTHK---KEWFEELSEDAGGTVRMGNKSTSKFR-- 351 Query: 6131 GDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARG 5952 V+YIP + +NL+S+G + GY+ G + +G + G Sbjct: 352 -----------------VKYIPDMDRNLLSMGTLEEHGYSFESKNGVLVVKEGTRTLLIG 394 Query: 5951 TNSGTLYTTLGCINMD---VVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM 5781 + LY G + V + LWH RLGH+S K M +LV KG L+G K + Sbjct: 395 SRHEKLYLLQGKPEVSHSMTVERRNDDTVLWHRRLGHISQKNMDILVKKGYLDGKKVSKL 454 Query: 5780 GLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSR 5604 LCE C+ GK +R+SF + L H+D+WG PS SLG +++++FI +SR Sbjct: 455 ELCEDCIYGKARRLSFVVATHNT-EDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSR 513 Query: 5603 KVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLM 5424 K WVYFLKH + F TF +W VENQ+ K+K LR DNG E+ F FC KGI Sbjct: 514 KTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRH 573 Query: 5423 RAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFK 5244 + +QNG+ ERMN + E R M G+PKTFWA +TV LIN+ PS + F+ Sbjct: 574 QTCAYTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFE 633 Query: 5243 ILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDK 5064 I ++ W K Y++L+ FGC + + D KL +A K +GY S GY+ W + Sbjct: 634 ISDKRWSGKSPVYNYLKRFGCVAFTYAD---EGKLVPRAKKGVFLGYLSGEKGYKVWLLE 690 Query: 5063 NRKILRHCDVTFDESVMYKDKEQK 4992 RK +VTF E+ +Y+D QK Sbjct: 691 ERKCSVSRNVTFQENAVYRDVMQK 714 Score = 182 bits (458), Expect(4) = e-148 Identities = 111/243 (45%), Positives = 152/243 (61%), Gaps = 8/243 (3%) Frame = -2 Query: 4899 EESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFD-EALQVEDSIKWELAM 4723 ++SEEV +RR IRAP R+ +Y D+ E ESF+ EAL Sbjct: 716 KDSEEVDTSSRVRRE---IRAPKRFDVEGYYSEFTDD-EEESFNVEAL------------ 759 Query: 4722 DDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG--KRRFKAHLVVKG*AT---- 4561 M SL KN TW + P G+R + KW+F+ K G + RFKA LV KG A Sbjct: 760 ---MDSLLKNHTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGI 816 Query: 4560 DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGK 4381 DY +IFSPVVK SIRILL IVA EN LEQ+D KT FLHGDL+++I+M+ P+G+ K Sbjct: 817 DYTDIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFK 876 Query: 4380 EHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTN-SYVFLLLYL 4204 + VC L +++YGLKQ+PR+W +KFDS+M + F ++ ++ C Y K + S V+LL+Y+ Sbjct: 877 QGEVCLLNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYV 936 Query: 4203 DDMLIEGSSMR 4171 DDML+ M+ Sbjct: 937 DDMLVAARDMQ 947 Score = 93.2 bits (228), Expect(4) = e-148 Identities = 49/104 (47%), Positives = 65/104 (62%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKDLG AK+ILGM+ISRDR TL LSQE Y+ KVL + V+ K TPL Sbjct: 955 KLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLETYNVDQCKFVVTPLGA 1014 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 H K+ + + + +M VPY+ A+ S++ M+ TRPD Y Sbjct: 1015 HLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMIDTRPDLAY 1058 Score = 85.4 bits (208), Expect(3) = 1e-025 Identities = 49/130 (37%), Positives = 69/130 (52%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER + ++E R +L S LP +W E T LIN+ +S ++ + + Sbjct: 578 YTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFEISDK 637 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P Y+YLK FGC+ F + + K PR +FLGY GYKV +K Sbjct: 638 RWSGKSPVYNYLKRFGCVAF--TYADEGKLVPRAKKGVFLGYLSGEKGYKVWLLEERKCS 695 Query: 65343 VSRDVSFYEN 65372 VSR+V+F EN Sbjct: 696 VSRNVTFQEN 705 Score = 80.4 bits (195), Expect(2) = 4e-022 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG I+ S Q V +S+ +A Y++ + +W+K L DFG + + V IFCD+ S Sbjct: 1102 LGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKTVEIFCDSQS 1161 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISM-NFCTMEEQIADIFT 87142 AI + KN V H RTKH+DI++H +R+ + G + + CT+ ADIFT Sbjct: 1162 AIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNS-ADIFT 1210 Score = 69.5 bits (167), Expect = 7e-009 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 2/226 (0%) Frame = -2 Query: 88560 QWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYV 88381 +W MD+ C+ HMT K F L E +V Y+ Sbjct: 311 EWVMDTGCNYHMTHKKEWFEELSEDAGGTVRMGNKSTSKF---------------RVKYI 355 Query: 88380 KGLIHNLLSISQLCDKENKVIFRS-TGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKK 88204 + NLLS+ L +E+ F S GV V+ T+ L LIG R + +Y + Sbjct: 356 PDMDRNLLSMGTL--EEHGYSFESKNGVLVVKEGTRTL-LIGSRHEKLYLLQGKPEVSHS 412 Query: 88203 LVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKS 88024 + + D +LWH+RL H SQ ++ L+ K + G K + ++CE C GK + Sbjct: 413 MT-VERRNDDTVLWHRRLGHISQKNMDILVKKGYLDG---KKVSKLELCEDCIYGKARRL 468 Query: 88023 SFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTRNT 87883 SF ++ L +H DL G P S G+ Y +D Y+R T Sbjct: 469 SFVVATH-NTEDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSRKT 515 Score = 54.7 bits (129), Expect(3) = 1e-025 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Frame = +1 Query: 64600 LTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIV 64776 ++K C C+ +G+ + F + + ++ + + DLW P L+ +YF+ + Sbjct: 451 VSKLELCEDCI-YGKARRLSFVVATHNTEDKL-NYVHSDLWGAPSVPLSLGKCQYFISFI 508 Query: 64777 DDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 D +SR TW L K T + +V NQ IK +R NGLEF + + N + K+K Sbjct: 509 DVYSRKTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEK 568 Score = 53.9 bits (127), Expect(2) = 4e-022 Identities = 35/131 (26%), Positives = 63/131 (47%), Gaps = 7/131 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAP------ATKLDLEGIGSTVEQKLYRGMIGSLL 87708 + Q+ Y+ ++L+ + +D K + TP+ AT+ L ++ Y +GS++ Sbjct: 987 LSQEDYLSKVLETYNVDQCKFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIM 1046 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ + VG+ +RF + PK G++ L GY Sbjct: 1047 YSMIDTRPDLAYCVGIISRFMSKPK--------------------------GADLTLRGY 1080 Query: 87530 ADVDYVGYLVDRKSTTGM 87477 D DY L +R+S +GM Sbjct: 1081 CDSDYAANLENRRSISGM 1098 Score = 47.6 bits (111), Expect(4) = e-148 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQIEDYL--------------------YQKDLHESLTGV 6986 M S+++E+EKFDG D+ +WK ++ ++ +++ ES G Sbjct: 1 MSSARVEMEKFDGHGDYTLWKEKLMAHMDLLGLTVALRETQSVSDPLESEEEGKESEKGD 60 Query: 6985 KPKSMTEEKWKLKDR*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVY 6806 K M E++ K A I L++S V KEKT +L+AL +Y + N++Y Sbjct: 61 KEALMEEKRQK-----ARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIY 115 Query: 6805 LMRRCSIYK 6779 L ++ YK Sbjct: 116 LKQKLYSYK 124 Score = 37.1 bits (84), Expect(2) = 2.8 Identities = 33/193 (17%), Positives = 78/193 (40%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y+ WK ++ + + +R T+ P ++ EG + K + + M K K Sbjct: 17 YTLWKEKLMAHMDLLGLTVALRETQSVSDPLESEEEGKESEK-----GDKEALMEEKRQK 71 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A+ +V + + +A + + L + + + Y KM+ Sbjct: 72 ARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIYLKQKLYSY---KMQEN 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 S++ I F +I +L + + + E+Q +L P+ ++ ++ T +++D Sbjct: 129 LSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYGSGRTTLSVD 188 Query: 89788 ELVRNLKTYEMNV 89750 E+V + + E+ + Sbjct: 189 EVVAAIYSKELEL 201 Score = 26.2 bits (56), Expect(3) = 1e-025 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVS 64558 N LWH RLGH+S Sbjct: 419 NDDTVLWHRRLGHIS 433 Score = 22.3 bits (46), Expect(2) = 2.8 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -2 Query: 89631 RGLNATKKSPPLKEKNPERSQNG-GCFKCGKTDHQIKDCP 89515 RG++ K+ K ++ RS+ GC+ CG+ H CP Sbjct: 224 RGMSEQKEKGN-KGRSRSRSKGWKGCWICGEEGHFKTSCP 262 >emb|CAB40039.1| (AL049524) putative retrotransposon [Arabidopsis thaliana] Length = 1230 Score = 275 bits (696), Expect(4) = e-148 Identities = 189/601 (31%), Positives = 299/601 (49%), Gaps = 23/601 (3%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +M EN SV +I+EF +++ L + ++ DE +A++L+ SLP+ +D + + Sbjct: 120 LYSYKMQENLSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYG 179 Query: 6614 RGSEKLKFDEIRDVVLSKSIR----KREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRI 6447 G L DE+ + SK + K+ +R G A + + + +T+G ++ + Sbjct: 180 SGRTTLSVDEVVAAIYSKELELGSNKKSIR---GQAEGLYVKDKPETRGMSEQKEKGNKG 236 Query: 6446 EENLRTDQT*LV*IVEKNDTFGRAIQSQRRNRIKNLEMTM-----IL*IQQRTLGML*FL 6282 R+ I + F + ++ + + K + I+ T + Sbjct: 237 RSRSRSKGWKGCWICGEEGHFKTSCPNKGKQQNKGKDQASGSKGEAATIKGNTSEGSGYY 296 Query: 6281 V*TAL----LNHGF-WIL-----VHLSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGK 6132 V AL +N G W++ H++H KE F+ G V + + + Sbjct: 297 VSEALHSTDVNLGNEWVMDTGCNYHMTHK---KEWFEELSEDAGGTVRMGNKSTSKFR-- 351 Query: 6131 GDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARG 5952 V+YIP + +NL+S+G + GY+ G + +G + G Sbjct: 352 -----------------VKYIPDMDRNLLSMGTLEEHGYSFESKNGVLVVKEGTRTLLIG 394 Query: 5951 TNSGTLYTTLGCINMD---VVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM 5781 + LY G + V + LWH RLGH+S K M +LV KG L+G K + Sbjct: 395 SRHEKLYLLQGKPEVSHSMTVERRNDDTVLWHRRLGHISQKNMDILVKKGYLDGKKVSKL 454 Query: 5780 GLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSR 5604 LCE C+ GK +R+SF + L H+D+WG PS SLG +++++FI +SR Sbjct: 455 ELCEDCIYGKARRLSFVVATHNT-EDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSR 513 Query: 5603 KVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLM 5424 K WVYFLKH + F TF +W VENQ+ K+K LR DNG E+ F FC KGI Sbjct: 514 KTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRH 573 Query: 5423 RAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFK 5244 + +QNG+ ERMN + E R M G+PKTFWA +TV LIN+ PS + F+ Sbjct: 574 QTCAYTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFE 633 Query: 5243 ILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDK 5064 I ++ W K Y++L+ FGC + + D KL +A K +GY S GY+ W + Sbjct: 634 ISDKRWSGKSPVYNYLKRFGCVAFTYAD---EGKLVPRAKKGVFLGYLSGEKGYKVWLLE 690 Query: 5063 NRKILRHCDVTFDESVMYKDKEQK 4992 RK +VTF E+ +Y+D QK Sbjct: 691 ERKCSVSRNVTFQENAVYRDVMQK 714 Score = 182 bits (458), Expect(4) = e-148 Identities = 111/243 (45%), Positives = 152/243 (61%), Gaps = 8/243 (3%) Frame = -2 Query: 4899 EESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFD-EALQVEDSIKWELAM 4723 ++SEEV +RR IRAP R+ +Y D+ E ESF+ EAL Sbjct: 716 KDSEEVDTSSRVRRE---IRAPKRFDVEGYYSEFTDD-EEESFNVEAL------------ 759 Query: 4722 DDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG--KRRFKAHLVVKG*AT---- 4561 M SL KN TW + P G+R + KW+F+ K G + RFKA LV KG A Sbjct: 760 ---MDSLLKNHTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGI 816 Query: 4560 DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGK 4381 DY +IFSPVVK SIRILL IVA EN LEQ+D KT FLHGDL+++I+M+ P+G+ K Sbjct: 817 DYTDIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFK 876 Query: 4380 EHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTN-SYVFLLLYL 4204 + VC L +++YGLKQ+PR+W +KFDS+M + F ++ ++ C Y K + S V+LL+Y+ Sbjct: 877 QGEVCLLNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYV 936 Query: 4203 DDMLIEGSSMR 4171 DDML+ M+ Sbjct: 937 DDMLVAARDMQ 947 Score = 93.2 bits (228), Expect(4) = e-148 Identities = 49/104 (47%), Positives = 65/104 (62%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKDLG AK+ILGM+ISRDR TL LSQE Y+ KVL + V+ K TPL Sbjct: 955 KLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLETYNVDQCKFVVTPLGA 1014 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 H K+ + + + +M VPY+ A+ S++ M+ TRPD Y Sbjct: 1015 HLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMIDTRPDLAY 1058 Score = 85.4 bits (208), Expect(3) = 1e-025 Identities = 49/130 (37%), Positives = 69/130 (52%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER + ++E R +L S LP +W E T LIN+ +S ++ + + Sbjct: 578 YTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFEISDK 637 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P Y+YLK FGC+ F + + K PR +FLGY GYKV +K Sbjct: 638 RWSGKSPVYNYLKRFGCVAF--TYADEGKLVPRAKKGVFLGYLSGEKGYKVWLLEERKCS 695 Query: 65343 VSRDVSFYEN 65372 VSR+V+F EN Sbjct: 696 VSRNVTFQEN 705 Score = 80.4 bits (195), Expect(2) = 4e-022 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG I+ S Q V +S+ +A Y++ + +W+K L DFG + + V IFCD+ S Sbjct: 1102 LGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKTVEIFCDSQS 1161 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISM-NFCTMEEQIADIFT 87142 AI + KN V H RTKH+DI++H +R+ + G + + CT+ ADIFT Sbjct: 1162 AIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNS-ADIFT 1210 Score = 69.5 bits (167), Expect = 7e-009 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 2/226 (0%) Frame = -2 Query: 88560 QWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYV 88381 +W MD+ C+ HMT K F L E +V Y+ Sbjct: 311 EWVMDTGCNYHMTHKKEWFEELSEDAGGTVRMGNKSTSKF---------------RVKYI 355 Query: 88380 KGLIHNLLSISQLCDKENKVIFRS-TGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKK 88204 + NLLS+ L +E+ F S GV V+ T+ L LIG R + +Y + Sbjct: 356 PDMDRNLLSMGTL--EEHGYSFESKNGVLVVKEGTRTL-LIGSRHEKLYLLQGKPEVSHS 412 Query: 88203 LVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKS 88024 + + D +LWH+RL H SQ ++ L+ K + G K + ++CE C GK + Sbjct: 413 MT-VERRNDDTVLWHRRLGHISQKNMDILVKKGYLDG---KKVSKLELCEDCIYGKARRL 468 Query: 88023 SFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTRNT 87883 SF ++ L +H DL G P S G+ Y +D Y+R T Sbjct: 469 SFVVATH-NTEDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSRKT 515 Score = 54.7 bits (129), Expect(3) = 1e-025 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Frame = +1 Query: 64600 LTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIV 64776 ++K C C+ +G+ + F + + ++ + + DLW P L+ +YF+ + Sbjct: 451 VSKLELCEDCI-YGKARRLSFVVATHNTEDKL-NYVHSDLWGAPSVPLSLGKCQYFISFI 508 Query: 64777 DDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 D +SR TW L K T + +V NQ IK +R NGLEF + + N + K+K Sbjct: 509 DVYSRKTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEK 568 Score = 53.9 bits (127), Expect(2) = 4e-022 Identities = 35/131 (26%), Positives = 63/131 (47%), Gaps = 7/131 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAP------ATKLDLEGIGSTVEQKLYRGMIGSLL 87708 + Q+ Y+ ++L+ + +D K + TP+ AT+ L ++ Y +GS++ Sbjct: 987 LSQEDYLSKVLETYNVDQCKFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIM 1046 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ + VG+ +RF + PK G++ L GY Sbjct: 1047 YSMIDTRPDLAYCVGIISRFMSKPK--------------------------GADLTLRGY 1080 Query: 87530 ADVDYVGYLVDRKSTTGM 87477 D DY L +R+S +GM Sbjct: 1081 CDSDYAANLENRRSISGM 1098 Score = 47.6 bits (111), Expect(4) = e-148 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQIEDYL--------------------YQKDLHESLTGV 6986 M S+++E+EKFDG D+ +WK ++ ++ +++ ES G Sbjct: 1 MSSARVEMEKFDGHGDYTLWKEKLMAHMDLLGLTVALRETQSVSDPLESEEEGKESEKGD 60 Query: 6985 KPKSMTEEKWKLKDR*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVY 6806 K M E++ K A I L++S V KEKT +L+AL +Y + N++Y Sbjct: 61 KEALMEEKRQK-----ARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIY 115 Query: 6805 LMRRCSIYK 6779 L ++ YK Sbjct: 116 LKQKLYSYK 124 Score = 37.1 bits (84), Expect(2) = 2.8 Identities = 33/193 (17%), Positives = 78/193 (40%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y+ WK ++ + + +R T+ P ++ EG + K + + M K K Sbjct: 17 YTLWKEKLMAHMDLLGLTVALRETQSVSDPLESEEEGKESEK-----GDKEALMEEKRQK 71 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A+ +V + + +A + + L + + + Y KM+ Sbjct: 72 ARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIYLKQKLYSY---KMQEN 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 S++ I F +I +L + + + E+Q +L P+ ++ ++ T +++D Sbjct: 129 LSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYGSGRTTLSVD 188 Query: 89788 ELVRNLKTYEMNV 89750 E+V + + E+ + Sbjct: 189 EVVAAIYSKELEL 201 Score = 26.2 bits (56), Expect(3) = 1e-025 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVS 64558 N LWH RLGH+S Sbjct: 419 NDDTVLWHRRLGHIS 433 Score = 22.3 bits (46), Expect(2) = 2.8 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -2 Query: 89631 RGLNATKKSPPLKEKNPERSQNG-GCFKCGKTDHQIKDCP 89515 RG++ K+ K ++ RS+ GC+ CG+ H CP Sbjct: 224 RGMSEQKEKGN-KGRSRSRSKGWKGCWICGEEGHFKTSCP 262 >dbj|BAB09923.1| (AB005236) copia-like retrotransposable element [Arabidopsis thaliana] Length = 1342 Score = 276 bits (698), Expect(3) = e-144 Identities = 204/688 (29%), Positives = 339/688 (48%), Gaps = 30/688 (4%) Frame = -3 Query: 7016 ERSSRIVDRGETKIHDGGEVETQGSLGSRVDSVDFVKKRGVTHRE-----GEDYVRSV-- 6858 E +V+ T+I DGG + + + D + +KRG G + +R V Sbjct: 39 EEEEAVVEDSTTEISDGGNQDPETATSKLEDKI-LKEKRGKARSTIILSLGNNVLRKVIK 97 Query: 6857 ----EGTVK-----HV*KTIGNEQGIFDA*MFNLQMSENGSVSDHINEFNIIVSQLNSVD 6705 G +K + K++ N + ++ +MSEN ++ +++N+F ++S L +V Sbjct: 98 QKTAAGMIKVLDQLFMAKSLPNRIYLKQR-LYGYKMSENMTMEENVNDFFKLISDLENVK 156 Query: 6704 INFEDEIKALILMSSLPESWDTVVAVISSSRGSEKLKFDEIRDVVLSKSIR---KREVRD 6534 + DE +A++L+ SLP +D + + + + L +EI + SK + ++ Sbjct: 157 VVVPDEDQAIVLLMSLPRQFDQLKETLKYCKTT--LHLEEITSAIRSKILELGASGKLLK 214 Query: 6533 SSGSALSVN*RRRSKTKGQINMVDQNQRIEENLRTDQT*LV*IVEKNDTFGRAIQSQRRN 6354 ++ L V R RS+T+G+ ++N+ ++ +T + E + + +R Sbjct: 215 NNSDGLFVQDRGRSETRGK--GPNKNKSRSKSKGAGKTCWICGKEGHFKKQCYVWKERNK 272 Query: 6353 RIKNLEMTMIL*IQQRTLGML*FLV*TALLNHG-----FWILVH--LSHSSPSKELFKNF 6195 + E + R +V ALL WIL H + K+ +F Sbjct: 273 QGSTSERGEASTVTARVTDAAALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKDWIIDF 332 Query: 6194 KYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGY 6015 K GKV + ++ E++G GDV IK + L DVRYIP + KNLIS+G + G Sbjct: 333 KETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGC 392 Query: 6014 AAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCI---NMDVVAESVSGSCLWHNRLGHMS 5844 KG I K + V G TLY G +V+ + + LWH+RLGH+ Sbjct: 393 WFESKKGILTIFKNDLTVLTGKKESTLYFLQGTTLAGEANVIDKEKDETSLWHSRLGHIG 452 Query: 5843 AKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPS 5664 AKG+++LV+KG L+ G + K L H+D+WG + Sbjct: 453 AKGLQVLVSKGHLDKNIMISFGAAKHVTKDK-----------------LDYVHSDLWGST 495 Query: 5663 PVS-SLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDN 5487 V S+G ++++TFI DF+R+ W+YF++ + F+ F +WK ++ENQ K+K L +DN Sbjct: 496 NVPFSIGKCQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDN 555 Query: 5486 GGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWA 5307 G E+ F +FC +G+ R +QNG+ ERMN+ + R M G+ K FWA Sbjct: 556 GLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWA 615 Query: 5306 NVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKA 5127 ST +LIN+ PS + F I EE W Y L+ FG Y+H D + KLN +A Sbjct: 616 EAASTAVFLINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSD---QGKLNPRA 672 Query: 5126 VKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKVLEITKQVGVEVE 4953 K +GY + ++ W ++RK + D+ F E+ MYK+ ++ + + EVE Sbjct: 673 KKGIFLGYPDGVKRFKVWLLEDRKCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVE 730 Score = 201 bits (506), Expect(3) = e-144 Identities = 115/244 (47%), Positives = 161/244 (65%), Gaps = 17/244 (6%) Frame = -2 Query: 4920 DTQPTPTEESEEVTREQVLRRSS--RTIRAPDRYSHSLHYLL-----LIDEGE---PESF 4771 D Q T+ ++ +L R R IRAP R+ L+ + ++GE PE++ Sbjct: 767 DKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVYEPETY 826 Query: 4770 DEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR--R 4597 +EA++ + KW+ A +EM S++KNDTW + D P GKR + KW+F+ K G R Sbjct: 827 EEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPR 886 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY EIFSPVVK SIR LL IV +M LEQ+D KT FLHG+LD Sbjct: 887 YKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLD 946 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 + I M QP+G+ VC L +SLYGLKQ+PRQW ++FDSFM S + +++ +PC Y Sbjct: 947 EYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVY 1006 Query: 4248 FKKYTN-SYVFLLLYLDDMLI 4189 ++ + SY++LLLY+DDMLI Sbjct: 1007 TQQLNDGSYIYLLLYVDDMLI 1027 Score = 89.3 bits (218), Expect(2) = 4e-034 Identities = 44/111 (39%), Positives = 68/111 (60%) Frame = -2 Query: 87465 GSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTSA 87286 G IS S Q VALST EAEY+A A + +W++ ++ G + + V + CD+ SA Sbjct: 1215 GGNTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSA 1274 Query: 87285 INIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 I + KN V H+RTKH+D+R+HF+R+ + G+I + + ADIFT ++ Sbjct: 1275 IALSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTV 1325 Score = 87.4 bits (213), Expect(3) = e-144 Identities = 46/103 (44%), Positives = 63/103 (60%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L+ FEMKDLGPA++ILGM+I+R+R L+LSQ Y+ VL F ++ +K TPL H Sbjct: 1042 LNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAH 1101 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 FKL + +M LVPY AI S++ M+ +RPD Y Sbjct: 1102 FKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAY 1144 Score = 85.0 bits (207), Expect(2) = 4e-034 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKL------DLEGIGSTVEQKLYRGMIGSLL 87708 + Q +YV +L+ F MD +K TP+ KL L ++ Y IGS++ Sbjct: 1073 LSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLARDAEYMKLVPYPNAIGSIM 1132 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + SRPD+ + VG+ +RF + P + H QAVK ++ Y+KGT D + + K F++ GY Sbjct: 1133 YSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGY 1192 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D DY L R+S TG Sbjct: 1193 CDSDYATDLDRRRSITG 1209 Score = 76.5 bits (185), Expect(4) = 9e-022 Identities = 44/130 (33%), Positives = 66/130 (49%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ ++ R +L +S L ++W E T +LIN+ +S + + Sbjct: 581 YTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEE 640 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 P Y LK FG + + ++S + K PR IFLGYP +KV +K Sbjct: 641 KWTGHPPDYKILKKFGSVAY--IHSDQGKLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCV 698 Query: 65343 VSRDVSFYEN 65372 VSRD+ F EN Sbjct: 699 VSRDIVFQEN 708 Score = 54.3 bits (128), Expect = 3e-004 Identities = 56/225 (24%), Positives = 87/225 (37%), Gaps = 5/225 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS----IDKV 88390 W +D+ CS HMT K + +E +E + V Sbjct: 312 WILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDV 371 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 Y+ + NL+S+ L DK F S + VL GK++ +Y + +T+ Sbjct: 372 RYIPEMSKNLISLGTLEDK--GCWFESKKGILTIFKNDLTVLTGKKESTLYFLQGTTLAG 429 Query: 88209 KKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*I 88030 + V + + + LWH RL H L L++K L K I Sbjct: 430 EANV-IDKEKDETSLWHSRLGHIGAKGLQVLVSKG-------------------HLDKNI 469 Query: 88029 KSSFKSKQMVSSTCSLELIHMDLCGPMRVQ-SRGEKIYVFVLVDDYTRNT 87883 SF + + V+ L+ +H DL G V S G+ Y +DD+TR T Sbjct: 470 MISFGAAKHVTKD-KLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRT 518 Score = 53.1 bits (125), Expect = 6e-004 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 24/108 (22%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQIEDYLYQKDLHESLTGVKPKSMTEEKW---------- 6956 M S + E+EKFDG D+ +WK ++ ++ L E L G + +++ E+ Sbjct: 1 MSSGRAEVEKFDGDGDYILWKEKLLAHMEMLGLLEGL-GEEEEAVVEDSTTEISDGGNQD 59 Query: 6955 ------KLKDR-------*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMN 6815 KL+D+ A I L+L NV ++K+KT +G++K L ++ S N Sbjct: 60 PETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPN 119 Query: 6814 KVYLMRRCSIYK 6779 ++YL +R YK Sbjct: 120 RIYLKQRLYGYK 131 Score = 48.0 bits (112), Expect(4) = 9e-022 Identities = 26/86 (30%), Positives = 43/86 (49%), Gaps = 1/86 (1%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGY-KYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQF 64875 D + DLW +V G +YF+ +DDF+R TW + K + + + NQ Sbjct: 485 DYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQ 544 Query: 64876 RVTIKSIRTYNGLEFISHETNIYLKKK 64956 +K + T NGLEF + E + + +K+ Sbjct: 545 DKKLKILITDNGLEFCNQEFDSFCRKE 571 Score = 35.6 bits (80), Expect(2) = 0.005 Identities = 34/171 (19%), Positives = 74/171 (42%) Frame = -1 Query: 90220 GNKVPKPADTYNEADYKMLGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEG 90041 GN+ P+ A + E D + K KA+ ++ LG + ++ +A + L Sbjct: 56 GNQDPETATSKLE-DKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMA 114 Query: 90040 TTQVRKFKIASLCSEYEAFKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRI 89861 + + + Y KM ++++ + F +I++L ++ V E+Q +L Sbjct: 115 KSLPNRIYLKQRLYGY---KMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMS 171 Query: 89860 FPRSWEIKVTAIREAKDLTNMTLDELVRNLKTYEMNVDKRGEGNKENFFGL 89708 PR ++ ++ K T + L+E+ +++ + + G+ K N GL Sbjct: 172 LPRQFDQLKETLKYCK--TTLHLEEITSAIRSKILELGASGKLLKNNSDGL 220 Score = 33.6 bits (75), Expect(2) = 0.005 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -2 Query: 89631 RGLNATKKSPPLKEKNPERSQNGG--CFKCGKTDHQIKDCPMW 89509 RG + T+ P K K+ +S+ G C+ CGK H K C +W Sbjct: 225 RGRSETRGKGPNKNKSRSKSKGAGKTCWICGKEGHFKKQCYVW 267 Score = 26.2 bits (56), Expect(4) = 9e-022 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 7/29 (24%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISS-------IHISFSPKKH 64615 LWH+RLGH+ ++ + S I ISF KH Sbjct: 443 LWHSRLGHIGAKGLQVLVSKGHLDKNIMISFGAAKH 478 Score = 21.6 bits (44), Expect(4) = 9e-022 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 Query: 64949 KKKGKIHQRSCPYAP 64993 +K+G I R+C Y P Sbjct: 569 RKEGVIRHRTCAYTP 583 >emb|CAB79135.1| (AL161554) putative transposable element [Arabidopsis thaliana] Length = 1308 Score = 271 bits (685), Expect(3) = e-140 Identities = 197/610 (32%), Positives = 305/610 (49%), Gaps = 20/610 (3%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +M +N S+ + +EF IV++L S+ I +E++A+++++SLP S+ + + Sbjct: 132 LYSFKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSYIQLKHTLKY- 190 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKRE-------VRDSSGSALSVN*RRRSKTKGQINMVDQN 6456 G++ L ++DVV S +RE +R + +AL R R +TK N Q Sbjct: 191 -GNKTLS---VQDVVSSAKSLERELSEQKETIRAPASTALYTAERGRPQTK---NTQGQG 243 Query: 6455 Q-RIEENLRTDQT*LV*IVE---KNDTFGRAIQSQRRNRIKNLEMTMIL*IQQRTLGML* 6288 + R N ++ T E K D + + + + K +T L + L M Sbjct: 244 KGRGRSNSKSRLTCWFCKKEGHVKKDCYAGKRKLENEGQGKAGVITEKL-VYSEALSMY- 301 Query: 6287 FLV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIK 6114 W++ H + + F F + L D+ +E +G G V + Sbjct: 302 -----DQEAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVN 356 Query: 6113 TTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTL 5934 T + R L +VR++P +++NLIS G D GY G G + K G L Sbjct: 357 THGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALCGNLVNGL 416 Query: 5933 YTTLG--CINMDVVAESVSGSC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 Y G +N + E + LWH RLGHMS MK+L KG LE ++ CE+C Sbjct: 417 YVLDGHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLEKKDIKELSFCENC 476 Query: 5762 VMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFL 5583 VMGK K++SF +VL H D+WG +++++ I D SRKVW+ FL Sbjct: 477 VMGKSKKLSFNVGKHITDEVL-GYIHADLWG---------KQYFLSIIDDKSRKVWLMFL 526 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 K + F F +WK VENQ + KVK LR+DNG E+ F FC GI R Sbjct: 527 KTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTP 586 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 +QNG+ +RMN+ L E R + G+ + FWA +T AYL+NR P+ + + EE+W+ Sbjct: 587 QQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWL 646 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 K+ Y HLR FGC YVH+D + KL +A+K +GY GY+ W K + Sbjct: 647 DKKPGYKHLRRFGCIAYVHLD---QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVIS 703 Query: 5042 CDVTFDESVMYKD----KEQKVLEITKQVG 4965 ++ F+E+ +YKD EQ V +I+ G Sbjct: 704 RNIVFNENQVYKDIRESSEQSVKDISDLEG 733 Score = 198 bits (497), Expect(3) = e-140 Identities = 112/264 (42%), Positives = 169/264 (63%), Gaps = 18/264 (6%) Frame = -2 Query: 4935 INVEADTQPTPTEE----SEEVTREQVLR-RSSRTIRAPDRYSHSLHYLLL------IDE 4789 I+ E+D++ + T+E S +++ Q R R R P + + H+ L I+ Sbjct: 758 IDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIES 817 Query: 4788 GEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PD 4609 EP+ + +A + + IKW M +E+ SL KN TW + + P ++ + +W+F++K Sbjct: 818 EEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIP 877 Query: 4608 G--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 G +R+KA LV +G DY E+F+PVVK SIRIL+ V ++M LEQMD KT F Sbjct: 878 GVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTF 937 Query: 4446 LHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 LHG+LD+ +YM+QP+GF V ++ VC L +SLYGLKQAPRQW KKF +FM +F ++E Sbjct: 938 LHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSE 997 Query: 4266 KDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 D C Y K+ +V+LLLY+DDML+ S E + L + + Sbjct: 998 HDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEAL 1039 Score = 91.3 bits (223), Expect(3) = 4e-028 Identities = 48/130 (36%), Positives = 73/130 (55%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG +R ++ L+E R LL +S L +W E T YL+NR S + + + Sbjct: 584 YTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEE 643 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + +K P Y +L+ FGC+ + L+ + K +PR +FLGYP T GYKV +K Sbjct: 644 LWLDKKPGYKHLRRFGCIAYVHLD--QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCV 701 Query: 65343 VSRDVSFYEN 65372 +SR++ F EN Sbjct: 702 ISRNIVFNEN 711 Score = 81.1 bits (197), Expect(2) = 9e-024 Identities = 40/118 (33%), Positives = 68/118 (56%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S S Q+ VALS+ +AE++A + +WI+ L D GL+ + ++CD+ S Sbjct: 1181 VGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQS 1240 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN H RTKHV+++ +F+RD +E G++ + AD+ T + + FE Sbjct: 1241 AICLSKNNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFE 1298 Score = 81.1 bits (197), Expect(3) = e-140 Identities = 46/103 (44%), Positives = 66/103 (63%), Gaps = 2/103 (1%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKD+G A +ILG+ I R+R TL LSQ Y++KV+ RFR+ DAK +TP+ H Sbjct: 1039 LSLKFEMKDMGAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAH 1098 Query: 3968 FKLSKEQSPKTVEERNHM--ALVPYALAICSLVSVMVCTRPDRLY 3840 FKL+ ++E + +VPY+ A+ S++ M+ T PD Y Sbjct: 1099 FKLT-----SLIDEIGSVDPEVVPYSSAVGSVMYAMIGTIPDVAY 1138 Score = 60.9 bits (145), Expect = 3e-006 Identities = 63/229 (27%), Positives = 91/229 (39%), Gaps = 7/229 (3%) Frame = -2 Query: 88575 RESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS-- 88402 +E+K +W +DS C+ HMT F E + + H Sbjct: 303 QEAKDKWVIDSGCTYHMTSRMDWFSEFNE-NETTMILLGDDHTVESKGSGTVKVNTHGGS 361 Query: 88401 ---IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVE--VINLNTQKLVLIGKRDKHIY 88237 + V +V L NL+S L +K+ ++ G + V K L G +Y Sbjct: 362 IRVLKNVRFVPNLRRNLISTGTL----DKLGYKHEGGDGKVRFYKENKTALCGNLVNGLY 417 Query: 88236 TVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVC 88057 +D T+ ++ EK LWH RL H S + L K L L K KE C Sbjct: 418 VLDGHTVVNENCNVEGSNEKTE-LWHCRLGHMSLNNMKILAEKGL---LEKKDIKELSFC 473 Query: 88056 EACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 E C +GK K SF + ++ L IH DL G K Y ++DD +R Sbjct: 474 ENCVMGKSKKLSFNVGKHITDEV-LGYIHADLWG---------KQYFLSIIDDKSR 519 Score = 58.6 bits (139), Expect(2) = 9e-024 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 5/140 (3%) Frame = -3 Query: 87899 IILGTPRGTW-IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLD--LEGIGSTVEQKL-Y 87732 II GT + Q +YV ++++RF+M DAK + TP+ KL ++ IGS + + Y Sbjct: 1059 IIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPEVVPY 1118 Query: 87731 RGMIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKG 87555 +GS++Y + + PD+ +++GL +RF + P G Sbjct: 1119 SSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP---------------------------G 1151 Query: 87554 SNFDLVGYADVDYVGYLVDRKSTTG 87480 +N ++ GY D D+ L R+S +G Sbjct: 1152 ANLEVQGYCDSDHAADLDKRRSISG 1176 Score = 56.6 bits (134), Expect(3) = 4e-028 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Frame = +1 Query: 64567 NERNLLYSYILLTKK-----TFCVHCLSHGQINTIIFPI-KNTTSSNRFFDLLRLDLWEP 64728 N +L LL KK +FC +C+ G+ + F + K+ T + + DLW Sbjct: 451 NNMKILAEKGLLEKKDIKELSFCENCVM-GKSKKLSFNVGKHIT--DEVLGYIHADLW-- 505 Query: 64729 YHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYN 64908 G +YFL I+DD SR W L K T + + LV NQ +K +RT N Sbjct: 506 -------GKQYFLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDN 558 Query: 64909 GLEFISHETNIYLKK 64953 GLEF + + + + K+ Sbjct: 559 GLEFCNLKFDEFCKQ 573 Score = 26.6 bits (57), Expect(3) = 4e-028 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMK 64573 N LWH RLGH+S MK Sbjct: 435 NEKTELWHCRLGHMSLNNMK 454 >emb|CAA20201.1| (AL031187) putative transposable element [Arabidopsis thaliana] Length = 1308 Score = 271 bits (685), Expect(3) = e-140 Identities = 197/610 (32%), Positives = 305/610 (49%), Gaps = 20/610 (3%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +M +N S+ + +EF IV++L S+ I +E++A+++++SLP S+ + + Sbjct: 132 LYSFKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSYIQLKHTLKY- 190 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKRE-------VRDSSGSALSVN*RRRSKTKGQINMVDQN 6456 G++ L ++DVV S +RE +R + +AL R R +TK N Q Sbjct: 191 -GNKTLS---VQDVVSSAKSLERELSEQKETIRAPASTALYTAERGRPQTK---NTQGQG 243 Query: 6455 Q-RIEENLRTDQT*LV*IVE---KNDTFGRAIQSQRRNRIKNLEMTMIL*IQQRTLGML* 6288 + R N ++ T E K D + + + + K +T L + L M Sbjct: 244 KGRGRSNSKSRLTCWFCKKEGHVKKDCYAGKRKLENEGQGKAGVITEKL-VYSEALSMY- 301 Query: 6287 FLV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIK 6114 W++ H + + F F + L D+ +E +G G V + Sbjct: 302 -----DQEAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVN 356 Query: 6113 TTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTL 5934 T + R L +VR++P +++NLIS G D GY G G + K G L Sbjct: 357 THGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALCGNLVNGL 416 Query: 5933 YTTLG--CINMDVVAESVSGSC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 Y G +N + E + LWH RLGHMS MK+L KG LE ++ CE+C Sbjct: 417 YVLDGHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLEKKDIKELSFCENC 476 Query: 5762 VMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFL 5583 VMGK K++SF +VL H D+WG +++++ I D SRKVW+ FL Sbjct: 477 VMGKSKKLSFNVGKHITDEVL-GYIHADLWG---------KQYFLSIIDDKSRKVWLMFL 526 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 K + F F +WK VENQ + KVK LR+DNG E+ F FC GI R Sbjct: 527 KTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTP 586 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 +QNG+ +RMN+ L E R + G+ + FWA +T AYL+NR P+ + + EE+W+ Sbjct: 587 QQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWL 646 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 K+ Y HLR FGC YVH+D + KL +A+K +GY GY+ W K + Sbjct: 647 DKKPGYKHLRRFGCIAYVHLD---QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVIS 703 Query: 5042 CDVTFDESVMYKD----KEQKVLEITKQVG 4965 ++ F+E+ +YKD EQ V +I+ G Sbjct: 704 RNIVFNENQVYKDIRESSEQSVKDISDLEG 733 Score = 198 bits (497), Expect(3) = e-140 Identities = 112/264 (42%), Positives = 169/264 (63%), Gaps = 18/264 (6%) Frame = -2 Query: 4935 INVEADTQPTPTEE----SEEVTREQVLR-RSSRTIRAPDRYSHSLHYLLL------IDE 4789 I+ E+D++ + T+E S +++ Q R R R P + + H+ L I+ Sbjct: 758 IDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIES 817 Query: 4788 GEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PD 4609 EP+ + +A + + IKW M +E+ SL KN TW + + P ++ + +W+F++K Sbjct: 818 EEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIP 877 Query: 4608 G--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 G +R+KA LV +G DY E+F+PVVK SIRIL+ V ++M LEQMD KT F Sbjct: 878 GVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTF 937 Query: 4446 LHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 LHG+LD+ +YM+QP+GF V ++ VC L +SLYGLKQAPRQW KKF +FM +F ++E Sbjct: 938 LHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSE 997 Query: 4266 KDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 D C Y K+ +V+LLLY+DDML+ S E + L + + Sbjct: 998 HDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEAL 1039 Score = 91.3 bits (223), Expect(3) = 4e-028 Identities = 48/130 (36%), Positives = 73/130 (55%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG +R ++ L+E R LL +S L +W E T YL+NR S + + + Sbjct: 584 YTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEE 643 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + +K P Y +L+ FGC+ + L+ + K +PR +FLGYP T GYKV +K Sbjct: 644 LWLDKKPGYKHLRRFGCIAYVHLD--QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCV 701 Query: 65343 VSRDVSFYEN 65372 +SR++ F EN Sbjct: 702 ISRNIVFNEN 711 Score = 81.1 bits (197), Expect(2) = 9e-024 Identities = 40/118 (33%), Positives = 68/118 (56%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S S Q+ VALS+ +AE++A + +WI+ L D GL+ + ++CD+ S Sbjct: 1181 VGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQS 1240 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN H RTKHV+++ +F+RD +E G++ + AD+ T + + FE Sbjct: 1241 AICLSKNNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFE 1298 Score = 81.1 bits (197), Expect(3) = e-140 Identities = 46/103 (44%), Positives = 66/103 (63%), Gaps = 2/103 (1%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKD+G A +ILG+ I R+R TL LSQ Y++KV+ RFR+ DAK +TP+ H Sbjct: 1039 LSLKFEMKDMGAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAH 1098 Query: 3968 FKLSKEQSPKTVEERNHM--ALVPYALAICSLVSVMVCTRPDRLY 3840 FKL+ ++E + +VPY+ A+ S++ M+ T PD Y Sbjct: 1099 FKLT-----SLIDEIGSVDPEVVPYSSAVGSVMYAMIGTIPDVAY 1138 Score = 60.9 bits (145), Expect = 3e-006 Identities = 63/229 (27%), Positives = 91/229 (39%), Gaps = 7/229 (3%) Frame = -2 Query: 88575 RESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS-- 88402 +E+K +W +DS C+ HMT F E + + H Sbjct: 303 QEAKDKWVIDSGCTYHMTSRMDWFSEFNE-NETTMILLGDDHTVESKGSGTVKVNTHGGS 361 Query: 88401 ---IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVE--VINLNTQKLVLIGKRDKHIY 88237 + V +V L NL+S L +K+ ++ G + V K L G +Y Sbjct: 362 IRVLKNVRFVPNLRRNLISTGTL----DKLGYKHEGGDGKVRFYKENKTALCGNLVNGLY 417 Query: 88236 TVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVC 88057 +D T+ ++ EK LWH RL H S + L K L L K KE C Sbjct: 418 VLDGHTVVNENCNVEGSNEKTE-LWHCRLGHMSLNNMKILAEKGL---LEKKDIKELSFC 473 Query: 88056 EACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 E C +GK K SF + ++ L IH DL G K Y ++DD +R Sbjct: 474 ENCVMGKSKKLSFNVGKHITDEV-LGYIHADLWG---------KQYFLSIIDDKSR 519 Score = 58.6 bits (139), Expect(2) = 9e-024 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 5/140 (3%) Frame = -3 Query: 87899 IILGTPRGTW-IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLD--LEGIGSTVEQKL-Y 87732 II GT + Q +YV ++++RF+M DAK + TP+ KL ++ IGS + + Y Sbjct: 1059 IIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPEVVPY 1118 Query: 87731 RGMIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKG 87555 +GS++Y + + PD+ +++GL +RF + P G Sbjct: 1119 SSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP---------------------------G 1151 Query: 87554 SNFDLVGYADVDYVGYLVDRKSTTG 87480 +N ++ GY D D+ L R+S +G Sbjct: 1152 ANLEVQGYCDSDHAADLDKRRSISG 1176 Score = 56.6 bits (134), Expect(3) = 4e-028 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Frame = +1 Query: 64567 NERNLLYSYILLTKK-----TFCVHCLSHGQINTIIFPI-KNTTSSNRFFDLLRLDLWEP 64728 N +L LL KK +FC +C+ G+ + F + K+ T + + DLW Sbjct: 451 NNMKILAEKGLLEKKDIKELSFCENCVM-GKSKKLSFNVGKHIT--DEVLGYIHADLW-- 505 Query: 64729 YHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYN 64908 G +YFL I+DD SR W L K T + + LV NQ +K +RT N Sbjct: 506 -------GKQYFLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDN 558 Query: 64909 GLEFISHETNIYLKK 64953 GLEF + + + + K+ Sbjct: 559 GLEFCNLKFDEFCKQ 573 Score = 26.6 bits (57), Expect(3) = 4e-028 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMK 64573 N LWH RLGH+S MK Sbjct: 435 NEKTELWHCRLGHMSLNNMK 454 >gb|AAF67363.1| (AF262041) Hypothetical protein T32B20.f [Arabidopsis thaliana] Length = 1504 Score = 434 bits (1105), Expect(2) = e-124 Identities = 246/546 (45%), Positives = 335/546 (61%), Gaps = 3/546 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EH+++LR V++ LR+++L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 776 VYSKSPEEHDVHLRRVMEKLREEKLFAKLSKCSFWQRKMGFLGHIVSVEGVSVDPEKIEA 835 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+GL YYRRFV+GF++ A T L +DV F+W +C+ F+ Sbjct: 836 IRDWPRPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFV-- 893 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 L+TS P+L L G + +Y DASGVG+ VLM++G I Y SR+L+ HE NYPT DL Sbjct: 894 -SLLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDL 952 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 953 EMAAV------------------FTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 994 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQ 38453 P K NMVA +LS K +V + L +I C V + V + Sbjct: 995 PSKANMVADALSCK----LVGAAPGQSVEALVSEIGALRLCAVAREPLGLEAV-----DR 1045 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILS 38273 + L R R Q +D L++ +G + +G + GR+ VP + + ILS Sbjct: 1046 ADLLTRVRLAQEKDEGLIA----ASKAEGSEYQFAANGTILVHGRVCVPKDEELRREILS 1101 Query: 38272 EAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRL 38093 EAH +SIH G KMYRDL+++Y W GM+ D+A++V+ C Q VK EH G + L Sbjct: 1102 EAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEHQVPGSMLQSL 1161 Query: 38092 SISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWE 37913 I +WKWD ITMDFV GLP S+ D+I+VIVD+LTKSA+FL ++ LA+ Y+ E Sbjct: 1162 PIPDWKWDFITMDFVVGLP-VSRTKDAIWVIVDRLTKSAYFLAIRKTDGATVLAKKYVSE 1220 Query: 37912 VVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDML 37733 +V+ HGVPVSI+SDR +FTS F FQ E+ T+V +S A+HPQTD QSE TIQ LEDML Sbjct: 1221 IVKLHGVPVSIVSDRDFKFTSAFWRAFQAEMDTKVQMSTAYHPQTDGQSERTIQTLEDML 1280 Query: 37732 HVCVLEFGG 37706 +CVL++GG Sbjct: 1281 RMCVLDWGG 1289 Score = 319 bits (808), Expect(3) = e-140 Identities = 155/277 (55%), Positives = 200/277 (71%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T P+S PYRM P E+ ELK QL++LLGKGFIR + +PW VLFVKKKD SFR+CI+YR Sbjct: 616 TAPLSKAPYRMVPVEMAELKKQLEDLLGKGFIRLNTSPWRTSVLFVKKKDGSFRLCIDYR 675 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 +LN+VT+KNKY +P ID+ D ++GA FSKIDLTSGY Q+ I +V KTAF TR GH+ Sbjct: 676 ELNRVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHF 735 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF+V FGL NAPAAFM LMN +F+ +L+ FVI+FIDDIL+YSKS + Sbjct: 736 EFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEHDVHLRRVMEKL 795 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 + L+AK KC F + FLGH+VS +GV VD KIEA++ W +PTN +++ SF+GLA Sbjct: 796 REEKLFAKLSKCSFWQRKMGFLGHIVSVEGVSVDPEKIEAIRDWPRPTNATEIRSFLGLA 855 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 YYRRF+ F+S+A +T LT ++VPF+WS ECEE F Sbjct: 856 GYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGF 892 Score = 284 bits (718), Expect = 2e-073 Identities = 211/586 (36%), Positives = 308/586 (52%), Gaps = 33/586 (5%) Frame = +2 Query: 67736 DVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPL 67915 ++PP F I+++ GT P+ PYR+ P E+ E+K QL+DLL K FIR + S W + Sbjct: 599 ELPPSRSDPFTIELEPGTAPLSKAPYRMVPVEMAELKKQLEDLLGKGFIRLNTSPWRTSV 658 Query: 67916 LFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRLT*DRAI----I 68083 LFVK+KD +CIDYR+LN++T+ N YP+PRID+L D L+GA+ ++ I Sbjct: 659 LFVKKKDGSFRLCIDYRELNRVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPI 718 Query: 68084 S*SLGRRISLRQLFKHVMAITSF**CILN*LTPMQLLWT**IERSDNIWI----PLLLYS 68251 + + R+ + R + H + M+L+ + E D I +L+YS Sbjct: 719 AEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYS 778 Query: 68252 LMIY*YNHAVRRNMSII*GPCLGF*RRK-SFTRSFQSVRFGLVSKEDIMVDPKKIETIKD 68428 ++ +RR M + L K SF + +VS E + VDP+KIE I+D Sbjct: 779 KSPEEHDVHLRRVMEKLREEKLFAKLSKCSFWQRKMGFLGHIVSVEGVSVDPEKIEAIRD 838 Query: 68429 WIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L------SCGLTSVRLVFK 68590 W RP + +I SFLGLAGYYRR + + + C V L+ Sbjct: 839 WPRPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSLLTS 898 Query: 68591 SSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHD 68770 + L L E E ++Y DAS +GLGCVLMQ+GKV+AYASRQL+ HE Y HD Sbjct: 899 TPVL--ALPEH-----GEPYMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHD 951 Query: 68771 LELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILY 68950 LE+ AVFT+H+SL+YIF Q +L LR+R W+EL+ DYD+ I Y Sbjct: 952 LEMA------------------AVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAY 993 Query: 68951 HPGKTNVVADALSLKAV-------------SMGSLAMLQVSKRPLAKDVQLLSNSFVLYI 69091 HP K N+VADALS K V +G+L + V++ PL + Sbjct: 994 HPSKANMVADALSCKLVGAAPGQSVEALVSEIGALRLCAVAREPLG-------------L 1040 Query: 69092 SESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGHIC 69271 + L+ R+ +Q+ D+G + K E + G + + G +C Sbjct: 1041 EAVDRADLLTRVR-------LAQEKDEGLIA-----ASKAEGSEYQFAANGTILVHGRVC 1088 Query: 69272 VPRTGI*LD*TWRRSIV---*VTLFI--QGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLN 69436 VP+ D RR I+ ++F G +Y DLK++Y MKRD+ ++V+ C Sbjct: 1089 VPK-----DEELRREILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWVAECDV 1143 Query: 69437 CQQVKHEHQKPGGVTLRIP 69493 CQ VK EHQ PG + +P Sbjct: 1144 CQLVKAEHQVPGSMLQSLP 1162 Score = 152 bits (380), Expect = 8e-034 Identities = 90/216 (41%), Positives = 126/216 (57%), Gaps = 2/216 (0%) Frame = +1 Query: 69259 GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCIS--MF 69432 G D +L R + E ++ +SIHP ATK L+ + ++ + + + Sbjct: 1085 GRVCVPKDEELRREILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWVAECDVC 1144 Query: 69433 ELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHF 69612 +L +E P + IP+WK + I +D VV L + K D IWVIV+RLTKSA+F Sbjct: 1145 QLVKAEHQVPGSML--QSLPIPDWKWDFITMDFVVGLPVSRTK-DAIWVIVDRLTKSAYF 1201 Query: 69613 VPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTF 69792 + ++ T LAK Y+ EIV+LHGV +SI+SDR KF S FW + E+ T+V +ST + Sbjct: 1202 LAIRKTDGATVLAKKYVSEIVKLHGVPVSIVSDRDFKFTSAFWRAFQAEMDTKVQMSTAY 1261 Query: 69793 HPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVE 69906 HPQTD QSE IQ LEDML CV+D+G HW L LV+ Sbjct: 1262 HPQTDGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVD 1299 Score = 128 bits (319), Expect = 1e-026 Identities = 85/208 (40%), Positives = 113/208 (53%), Gaps = 13/208 (6%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ+ + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 700 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVF 759 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYH- 68394 +++ EEH+ HLR V L+E+KL+ K SKC W QR+ Sbjct: 760 QEFLDEFVIIFIDDILVYSKSPEEHDVHLRRVMEKLREEKLFAKLSKCSFW---QRKMGF 816 Query: 68395 -------GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT 68538 G D + ++ +R L+ Y F S+A +T+LT Sbjct: 817 LGHIVSVEGVSVDPEKIEAIRDWPRPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLT 876 Query: 68539 *KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 K+V F+WS ECE F L LT+ +L LP E ++VY Sbjct: 877 GKDVPFVWSPECEEGFVSL---LTSTPVLALPEHGEPYMVY 914 Score = 128 bits (319), Expect(3) = e-140 Identities = 78/164 (47%), Positives = 100/164 (60%), Gaps = 15/164 (9%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL+ HE NYPTHDL++AAV Sbjct: 911 YMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAV------------- 957 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 +TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH KAN+VADALS K Sbjct: 958 -----FTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPSKANMVADALSCKLVGA 1012 Query: 57655 ---------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK--GGFFACVEARSS 57798 V +G+L V+R PL E A+ R+ + ++ G A +A S Sbjct: 1013 APGQSVEALVSEIGALRLCAVAREPLGLEAVDRADLLTRVRLAQEKDEGLIAASKAEGS 1071 Score = 101 bits (250), Expect(3) = e-140 Identities = 45/93 (48%), Positives = 64/93 (68%) Frame = +3 Query: 57876 GKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSR 58055 G E G +++ RVCVP+ ++L IL+EAH+S +SIHPGATKMY DLK+++ W Sbjct: 1070 GSEYQFAANGTILVHGRVCVPKDEELRREILSEAHASMFSIHPGATKMYRDLKRYYQWVG 1129 Query: 58056 MQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 M+ D+ ++VA+C CQ VK EHQ PG L+ +P Sbjct: 1130 MKRDVANWVAECDVCQLVKAEHQVPGSMLQSLP 1162 Score = 88.5 bits (216), Expect = 1e-014 Identities = 57/164 (34%), Positives = 80/164 (48%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q RH+SYAD R+ L F V D ++L ++ ++G R KLSPRYIGPF I+ Sbjct: 1339 MKEAQDRHRSYADKRKRELEFEVGDGVYLKMAMLRGPNRSISEIKLSPRYIGPFRIVERV 1398 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+LP A VF VSM R + + VL +L +T LV +L R Sbjct: 1399 GPVAYRLELPDVMRAFRKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARLVRVLERR 1458 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + R+ L++ + W P R K+ F QV Sbjct: 1459 IKELRRKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQV 1502 Score = 46.5 bits (108), Expect = 0.059 Identities = 40/144 (27%), Positives = 67/144 (45%) Frame = +1 Query: 54655 VITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGESVIVEKM 54834 V T LV VLFD G + + + A+ ++ D + V G+ + V + Sbjct: 440 VCVETLLVGGVEAHVLFDSGASHCFITPESASRGNIRGDPGEQLGAVKVAGGQFLAVLER 499 Query: 54835 *RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKPGTDSLV* 55014 + + G + LII + +DVILGM WL LDC+ V+ +P LV Sbjct: 500 AKGVDIQIAGESMPAHLIISPVELYDVILGMDWLDHYRVHLDCHHGRVSFERP-EGRLVY 558 Query: 55015 EGDYISTPVRIISCLRAKRMVSKG 55086 +G ++ +IS ++A++M+ KG Sbjct: 559 QGVRPTSGSLVISAVQAEKMIEKG 582 Score = 43.4 bits (100), Expect = 0.51 Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 1/187 (0%) Frame = -3 Query: 40925 APVAAPDLYALLTQLLEAIGQMRQAPAPALQGNPVVAAPEV*SSLVHVAALPNLEVRGML 40746 A + L LL QLLE + + AP AP V + V A EV L Sbjct: 91 AQIPEVGLAGLLRQLLERLPGVVPVEAPV--------APRV--AEVQQRAAVAEEVPSYL 140 Query: 40745 LRE*KMIGVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPA 40569 +M+ QR+ FSG E+A ++ S D H G A Sbjct: 141 ----RMMEQLQRIGTGYFSGGTSPEEADSWRSRVERNFGSSRCPAEYRVDLAVHFLEGDA 196 Query: 40568 RQWWRTY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEAR 40389 WWR+ R +SW+ F F +++ + R+ F L G ++ EY+ Sbjct: 197 HLWWRSVTARRR--QADMSWTDFVAEFNAKYFAQEALDRMEALFLELTQGERSVREYDQE 254 Query: 40388 FHEFSRHA 40365 F+ +A Sbjct: 255 FNRLLVYA 262 Score = 40.2 bits (92), Expect(2) = e-124 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 742 FGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 776 >dbj|BAA81778.1| (AP000364) Similar to Transposon MAGGY gag and pol gene homologues. (L35053) [Oryza sativa] Length = 1491 Score = 314 bits (796), Expect(3) = e-136 Identities = 160/278 (57%), Positives = 194/278 (69%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PIS PYRM EL ELK Q++EL KGF+RPS++PWGA VLFVKKKD S RMC++YR Sbjct: 725 TAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYR 784 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+KNKY +P IDD FD ++GA VFSKIDL SGY QLKI ++PKTAF TR G Y Sbjct: 785 SLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLY 844 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF V SFGL NAPA FM LMN +F YL+ FV+VFIDDILIYS+ + Sbjct: 845 EFTVLSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDILIYSRDEEEHAEHLRLVLEKL 904 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 LYAKF KCEF L V+FLGHV+S GV VD +K+EAV W P +V+++ SF+GLA Sbjct: 905 RKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 964 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRF S IA + L K+ F+WS +C+ESF+ Sbjct: 965 GYYRRFTEGLSKIARPMRQLLKKEKKFVWSEQCQESFE 1002 Score = 273 bits (691), Expect = 3e-070 Identities = 150/292 (51%), Positives = 187/292 (63%), Gaps = 15/292 (5%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW------------LYLWSWS 39323 YEF ++S GLT ++L++ +M Y +Y Sbjct: 844 YEFTVLSFGLTNAPAY------------FMNLMNKVFMDYLDKFVVVFIDDILIYSRDEE 891 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +LR+VL+ LR +LYAKFSKCEFWLK VAF GHV+S G+ VDP K+EA+ W P Sbjct: 892 EHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAP 951 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSAT---HLNLQDVSFMWLVKCDMSFLKLKELITSA 38972 SVTE+ SF+GL YYRRF EG S A L ++ F+W +C SF +LKE +TSA Sbjct: 952 KSVTEIRSFLGLAGYYRRFTEGLSKIARPMRQLLKKEKKFVWSEQCQESFEQLKEKLTSA 1011 Query: 38971 PILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVF 38792 PIL L F IYCDAS G+ VLM+ G + Y SR+L+ HE NYPT DLELA +V Sbjct: 1012 PILVLPDIRKDFVIYCDASRQGLGGVLMQDGKVVAYASRKLRPHEENYPTHDLELAAVVH 1071 Query: 38791 ALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMV 38612 AL IWRHYL G + YTDH SL+ I Q DLN R RW+EL+KDYDL + YH GK N+V Sbjct: 1072 ALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDLEVHYHLGKANVV 1131 Query: 38611 AYSLSRK 38591 A +LSRK Sbjct: 1132 ADALSRK 1138 Score = 183 bits (459), Expect = 4e-043 Identities = 105/209 (50%), Positives = 135/209 (64%), Gaps = 6/209 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 ++S + VDP K+E + +W P SV +I SFLGLAGYYRR S I+ P Sbjct: 929 VISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFTEGLSKIARPMRQLLKKE 988 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C + +L K + L+L R+ ++Y DAS+ GLG VLMQ GKV Sbjct: 989 KKFVWSEQCQESFEQLKEKLTSAPILVLP----DIRKDFVIYCDASRQGLGGVLMQDGKV 1044 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASR+L+ HE+ Y HDLEL VV ALKIW +YL G H ++T+H+SL+YIF Q DL Sbjct: 1045 VAYASRKLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLN 1104 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKA 68998 LR+R WLEL+KDYD+ + YH GK NVVADALS K+ Sbjct: 1105 LRQRRWLELIKDYDLEVHYHLGKANVVADALSRKS 1139 Score = 179 bits (449), Expect(3) = e-136 Identities = 81/119 (68%), Positives = 98/119 (82%) Frame = +1 Query: 57298 R*NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHY 57477 R +F++YCD S GLG VLM + V+ YASR+L+ HE NYPTHDL+LAAVV ALK WRHY Sbjct: 1020 RKDFVIYCDASRQGLGGVLMQDGKVVAYASRKLRPHEENYPTHDLELAAVVHALKIWRHY 1079 Query: 57478 LYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 L G C++YTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ + YHLGKANVVADALSRK Sbjct: 1080 LIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDLEVHYHLGKANVVADALSRK 1138 Score = 177 bits (445), Expect(2) = 7e-048 Identities = 114/329 (34%), Positives = 172/329 (51%), Gaps = 8/329 (2%) Frame = -1 Query: 38497 DIFYSRCVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGR 38318 DI+ L Y+ QS L R R W L+ D + +A + D + + S Sbjct: 1086 DIYTDHKSLKYIFTQSDLNLRQRRWL----ELIKDYDLEVHYHLGKANVVADALSRKSHC 1141 Query: 38317 ISVPTVGDSIQL--------ILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFV 38162 + T G + +L + EAHE YS+H G+ KMY+DL+ Y W M+ D+A++V Sbjct: 1142 NHLRTEGMAPELKEEIAQLNLHIEAHESAYSLHPGSTKMYQDLKDGYWWPNMKRDVAEYV 1201 Query: 38161 SRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTK 37982 + C Q+VK E+ R D+LTK Sbjct: 1202 ALCDVCQKVKAEYQRPA--------------------------------------DRLTK 1223 Query: 37981 SAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDL 37802 +A F+PV++ +S +L +Y+ +V HG+P IISDRG+QFTS F + LG+ + Sbjct: 1224 TARFIPVKTNYSSAKLVELYMTRIVCLHGIPKRIISDRGTQFTSHFWEKVHEALGSYLAF 1283 Query: 37801 SAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVA 37622 S A+HPQTD Q+E T QVLEDML C L+F ++ P +F+YN+ F +N++M A Sbjct: 1284 STAYHPQTDGQTERTNQVLEDMLRACALDFSKDWERCLPYTEFSYNNSFQANLKMSPNEA 1343 Query: 37621 LYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFK 37511 L+GR CR+ + W E+ + G D+IQ A E+VR+ + Sbjct: 1344 LFGRRCRTPLMWSETGERAVFGPDIIQEAEEKVRLIR 1380 Score = 151 bits (377), Expect(2) = 5e-040 Identities = 69/129 (53%), Positives = 94/129 (72%) Frame = +1 Query: 69586 NRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELG 69765 +RLTK+A F+PV+T Y+ KL ++Y+ IV LHG+ IISDRGT+F SHFW +H+ LG Sbjct: 1219 DRLTKTARFIPVKTNYSSAKLVELYMTRIVCLHGIPKRIISDRGTQFTSHFWEKVHEALG 1278 Query: 69766 TRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEM 69945 + + ST +HPQTD Q+E QVLEDML AC +DF W++ LP EF+YNNS+ + +M Sbjct: 1279 SYLAFSTAYHPQTDGQTERTNQVLEDMLRACALDFSKDWERCLPYTEFSYNNSFQANLKM 1338 Query: 69946 APFEALYGR 69972 +P EAL+GR Sbjct: 1339 SPNEALFGR 1347 Score = 147 bits (367), Expect(2) = 2e-067 Identities = 71/127 (55%), Positives = 92/127 (71%) Frame = +2 Query: 67682 ESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQD 67861 + I VV F +VFP DLP +PPD DI+F ID+ GT PI PYR+ EL+E+K Q+++ Sbjct: 690 KGIPVVQRFPDVFPEDLPGMPPDRDIEFLIDLIPGTAPISKRPYRMPVNELEELKKQIRE 749 Query: 67862 LLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQG 68041 L K F+R S S WGAP+LFVK+KD M MC+DYR LN++TI N YP+PRIDDLFD L+G Sbjct: 750 LQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKG 809 Query: 68042 ASVSPRL 68062 A V ++ Sbjct: 810 AKVFSKI 816 Score = 138 bits (345), Expect(2) = 2e-067 Identities = 93/208 (44%), Positives = 114/208 (54%), Gaps = 10/208 (4%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQLK+R DI KTAF TRYG YEF V+ F LTNA A FM+LMN F Sbjct: 809 GAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVLSFGLTNAPAYFMNLMNKVF 868 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRRYH 68394 Y +EEH HLR V L++ KLY KFSKCE WL V H Sbjct: 869 MDYLDKFVVVFIDDILIYSRDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGH 928 Query: 68395 ----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KE 68547 GG D + + +R L+ Y IA + +L KE Sbjct: 929 VISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFTEGLSKIARPMRQLLKKE 988 Query: 68548 VTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 F+WS++C+ SF++LK LT+A IL LP R+ FV+Y Sbjct: 989 KKFVWSEQCQESFEQLKEKLTSAPILVLPDIRKDFVIY 1026 Score = 74.9 bits (181), Expect = 2e-010 Identities = 31/59 (52%), Positives = 41/59 (68%) Frame = +3 Query: 57972 EAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKR 58148 EAH S YS+HPG+TKMY DLK + W M+ D+ ++VA C CQ+VK E+QRP L + Sbjct: 1165 EAHESAYSLHPGSTKMYQDLKDGYWWPNMKRDVAEYVALCDVCQKVKAEYQRPADRLTK 1223 Score = 67.9 bits (163), Expect = 2e-008 Identities = 36/91 (39%), Positives = 52/91 (56%), Gaps = 3/91 (3%) Frame = -3 Query: 40634 QSLGLLDSRGAD---FTAHQFRGPARQWWRTY*ESRPFGSPPISWSQFSKAFLSRFMPRS 40464 + L L+ R AD F A+Q GPA WW TY E+R + +W +F+ AF F+P + Sbjct: 265 KKLTLVRVREADKVIFEANQLEGPAGDWWDTYKEAREEDAGEPNWEEFTTAFRDNFVPAA 324 Query: 40463 VRYRLCDHFSRLEHGSMTISEYEARFHEFSRHAT 40362 V + F RL G+ T+ EY RF + +R+AT Sbjct: 325 VMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYAT 358 Score = 47.6 bits (111), Expect = 0.026 Identities = 23/64 (35%), Positives = 38/64 (58%) Frame = +1 Query: 66376 DFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEADRLIR 66555 +FT F FVP + M K+ EF L+QG +V E+ +F LAR+A+ E +++ + Sbjct: 311 EFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATGDLADEEEKIDK 370 Query: 66556 FVKG 66567 F++G Sbjct: 371 FIEG 374 Score = 45.7 bits (106), Expect = 0.10 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%) Frame = +1 Query: 54538 GGGQVGTTAAQLGRSNGQTGDKTHCYAFPRRSKVETSDAVITSTFLVCDCMTFVLFDPGY 54717 G G GT + G H R + + V+ F + VLFD G Sbjct: 515 GRGLFGTPQTNRTTTGFGRGQVNHV----RAEEAQEDQGVLMGMFSINSTPVKVLFDSGA 570 Query: 54718 TFSYESSSFATGLDLYCDLLDMPIHVSTHVGESVIVEKM*RSCLVIFVGSNTYV---DLI 54888 + S+ S + +L L P+ V + GE + +C+ + + V +L+ Sbjct: 571 SHSFISLKVSQQHNLTRVKLRQPMLVHSPGGEIAVDT----ACIDVPIRLRDVVFPSNLM 626 Query: 54889 ILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKP-GTD 55002 +L DVILGM WL+ + ++DC + VTL P G+D Sbjct: 627 VLMPQTLDVILGMDWLTKHRGVIDCRRREVTLTTPWGSD 665 Score = 43.8 bits (101), Expect(3) = e-136 Identities = 21/39 (53%), Positives = 25/39 (63%) Frame = +3 Query: 56307 QTSVSIVCEFLDVFPADLPSMPLDRDIDFCIDVERLLAP 56423 Q + +V F DVFP DLP MP DRDI+F ID+ AP Sbjct: 689 QKGIPVVQRFPDVFPEDLPGMPPDRDIEFLIDLIPGTAP 727 Score = 43.0 bits (99), Expect(2) = 7e-048 Identities = 20/39 (51%), Positives = 27/39 (68%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMK 37401 I+DRL++ QSR +SY D RR L F D ++L VSPM+ Sbjct: 1379 IRDRLKVAQSRQKSYTDTRRRNLEFKEGDYVYLKVSPMR 1417 Score = 43.0 bits (99), Expect(2) = 5e-040 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +2 Query: 69344 GLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKP 69469 G +Y DLK Y MKRD+ ++V+ C CQ+VK E+Q+P Sbjct: 1176 GSTKMYQDLKDGYWWPNMKRDVAEYVALCDVCQKVKAEYQRP 1217 >emb|CAB78181.1| (AL161517) putative reverse-transcriptase-like protein [Arabidopsis thaliana] Length = 1240 Score = 333 bits (845), Expect(2) = e-133 Identities = 178/372 (47%), Positives = 241/372 (63%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 LV++G + +IS + A++M+ K C YL+ ++ ++ + +V+EF DVF Sbjct: 409 LVYQGVRPISGSLVISAVQAEKMIEKGCEAYLVTISMPESVGQVAVSDIRVVQEFQDVFQ 468 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 + L S+ F T P+S PYRMAPAE+ ELK QL+ Sbjct: 469 S---LQGLPPSQSDP-------------FTIELEPGTAPLSKAPYRMAPAEMAELKKQLK 512 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 +LLGKGFIRPS +PWGA VLFVKKKD SFR+CI+YR+LN+VT+KN+Y +P ID+ D ++ Sbjct: 513 DLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQLR 572 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDLTSGY Q+ I +V KTAF TR GH+EF+V FGL NAPA FM LMN +F Sbjct: 573 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSVF 632 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FIDDIL+YSKS + + L+AK KC F + FLGH Sbjct: 633 QEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGH 692 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 +VS +GV VD KIEA++ W +PTN +++ SF+G A YYRRF+ F+S+A +T LT ++ Sbjct: 693 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKD 752 Query: 57206 VPFIWSGECEESF 57244 VPF+WS ECEE F Sbjct: 753 VPFVWSQECEEGF 765 Score = 272 bits (688), Expect(2) = 6e-075 Identities = 133/252 (52%), Positives = 177/252 (69%), Gaps = 3/252 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S E E++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 649 VYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 708 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+G YYRRFV+GF++ A T L +DV F+W +C+ F+ L Sbjct: 709 IRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSQECEEGFVSL 768 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DAS VG+ VLM+ G I Y SR+L HE NYPT DL Sbjct: 769 KEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHGKVIAYASRQLMKHEGNYPTHDL 828 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 829 EMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 888 Query: 38632 PGKKNMVAYSLSRKQ 38588 PGK N+V +LSRK+ Sbjct: 889 PGKANVVVDALSRKR 903 Score = 199 bits (502), Expect = 4e-048 Identities = 112/225 (49%), Positives = 147/225 (64%), Gaps = 21/225 (9%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + +I SFLG AGYYRR + + Sbjct: 693 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKD 752 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY ++Y DAS++GLGCVLMQ G Sbjct: 753 VPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPY------MVYTDASRVGLGCVLMQHG 806 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIF Q + Sbjct: 807 KVIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 866 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV-------------SMGSLAMLQ 69028 L LR+R W+EL+ DYD+ I YHPGK NVV DALS K V +G+L + Sbjct: 867 LNLRQRRWMELVADYDLEIAYHPGKANVVVDALSRKRVGAALGQSVEVLVSEIGALRLCA 926 Query: 69029 VSKRPL 69046 V++ PL Sbjct: 927 VAREPL 932 Score = 170 bits (426), Expect(2) = e-133 Identities = 89/152 (58%), Positives = 109/152 (71%), Gaps = 13/152 (8%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 787 YMVYTDASRVGLGCVLMQHGKVIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYG 846 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 K +V+TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH GKANVV DALSRK Sbjct: 847 GKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPGKANVVVDALSRKRVGA 906 Query: 57655 ---------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK 57762 V +G+L V+R PL E A+ R+ + +K Sbjct: 907 ALGQSVEVLVSEIGALRLCAVAREPLGLEAVDRADLLTRVRLAQK 951 Score = 139 bits (347), Expect(2) = 4e-062 Identities = 71/146 (48%), Positives = 99/146 (67%), Gaps = 1/146 (0%) Frame = +2 Query: 67610 QLVERECLAYMAHIG-DTSVETNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLG 67786 +++E+ C AY+ I SV + I VV EF +VF + L +PP F I+++ G Sbjct: 430 KMIEKGCEAYLVTISMPESVGQVAVSDIRVVQEFQDVFQS-LQGLPPSQSDPFTIELEPG 488 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 T P+ PYR+ PAE+ E+K QL+DLL K FIR S S WGAP+LFVK+KD +CIDYR Sbjct: 489 TAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDYR 548 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGAS 68047 +LN++T+ N YP+PRID+L D L+GA+ Sbjct: 549 ELNRVTVKNRYPLPRIDELLDQLRGAT 575 Score = 128 bits (319), Expect(2) = 4e-062 Identities = 81/208 (38%), Positives = 110/208 (51%), Gaps = 16/208 (7%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ+ + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 573 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSVF 632 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW---LSVQRR 68388 +++ EE E HLR V L+E+KL+ K SKC W + Sbjct: 633 QEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGH 692 Query: 68389 YHGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLST-------------IYDFLSIASTLT 68529 D +++ + + RP + F S+A +T Sbjct: 693 IVSAEGVSVDPEKIE------AIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMT 746 Query: 68530 RLT*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 +LT K+V F+WS ECE F LK LT+ +L LP + ++VY Sbjct: 747 KLTGKDVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVY 790 Score = 125 bits (312), Expect = 7e-026 Identities = 67/150 (44%), Positives = 95/150 (62%), Gaps = 2/150 (1%) Frame = -1 Query: 38242 LGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRI 38063 L KMYRDL+++Y W GM+ D+A++V+ C Q VK EH GG + L I EWKWD I Sbjct: 956 LRATKMYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFI 1015 Query: 38062 TMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVS 37883 TMD V GL + S+ D+I+VIVD+LTKSAHFL ++ LA+ ++ E+V+ HGVP++ Sbjct: 1016 TMDLVVGL-RVSRTKDAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEIVKLHGVPLN 1074 Query: 37882 I--ISDRGSQFTS*FKTTFQDELGTRVDLSAA 37793 + DR + + + E+G RV L A Sbjct: 1075 MKEAQDRQRSYADKRRRELEFEVGDRVYLKMA 1106 Score = 83.5 bits (203), Expect = 4e-013 Identities = 54/164 (32%), Positives = 79/164 (47%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R +SYAD RR L F V DR++L ++ ++G R KLSPRY+GPF+I+ Sbjct: 1075 MKEAQDRQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFKIVERV 1134 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 VAY L+LP A H VF VSM R + + L +L +T V +L R Sbjct: 1135 EPVAYRLELPDVMRAFHKVFHVSMLRKCLHKDDEALAKIPEDLQPNMTLEARPVRVLERR 1194 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + ++ L++ + W P R K+ F QV Sbjct: 1195 IKELRQKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQV 1238 Score = 71.8 bits (173), Expect(2) = 1e-016 Identities = 43/96 (44%), Positives = 60/96 (61%), Gaps = 2/96 (2%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IPEWK + I +D+VV L + K D IWVIV+RLTKSAHF+ ++ T LAK ++ EI Sbjct: 1007 IPEWKWDFITMDLVVGLRVSRTK-DAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEI 1065 Query: 69673 VRLHGVSISI--ISDRGTKFMSHFWLSMHKELGTRVDL 69780 V+LHGV +++ DR + + E+G RV L Sbjct: 1066 VKLHGVPLNMKEAQDRQRSYADKRRRELEFEVGDRVYL 1103 Score = 58.6 bits (139), Expect = 1e-005 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +3 Query: 58008 ATKMYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ATKMY DLK+++ W M+ D+ ++VA+C CQ VK EHQ GG L+ +P E Sbjct: 958 ATKMYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPE 1009 Score = 43.8 bits (101), Expect(2) = 1e-016 Identities = 20/46 (43%), Positives = 29/46 (62%) Frame = +2 Query: 69356 IYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +Y DLK++Y MK D+ ++V+ C CQ VK EHQ GG+ +P Sbjct: 961 MYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLP 1006 Score = 38.7 bits (88), Expect(2) = 6e-075 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F+ LM +F+ LD FVIIF+DDILV Sbjct: 615 FGLTNAPAVFMRLMNSVFQEFLDEFVIIFIDDILV 649 >emb|CAB40024.1| (AL049523) putative reverse-transcriptase-like protein [Arabidopsis thaliana] Length = 1240 Score = 333 bits (845), Expect(2) = e-133 Identities = 178/372 (47%), Positives = 241/372 (63%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 LV++G + +IS + A++M+ K C YL+ ++ ++ + +V+EF DVF Sbjct: 409 LVYQGVRPISGSLVISAVQAEKMIEKGCEAYLVTISMPESVGQVAVSDIRVVQEFQDVFQ 468 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 + L S+ F T P+S PYRMAPAE+ ELK QL+ Sbjct: 469 S---LQGLPPSQSDP-------------FTIELEPGTAPLSKAPYRMAPAEMAELKKQLK 512 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 +LLGKGFIRPS +PWGA VLFVKKKD SFR+CI+YR+LN+VT+KN+Y +P ID+ D ++ Sbjct: 513 DLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQLR 572 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDLTSGY Q+ I +V KTAF TR GH+EF+V FGL NAPA FM LMN +F Sbjct: 573 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSVF 632 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FIDDIL+YSKS + + L+AK KC F + FLGH Sbjct: 633 QEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGH 692 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 +VS +GV VD KIEA++ W +PTN +++ SF+G A YYRRF+ F+S+A +T LT ++ Sbjct: 693 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKD 752 Query: 57206 VPFIWSGECEESF 57244 VPF+WS ECEE F Sbjct: 753 VPFVWSQECEEGF 765 Score = 272 bits (688), Expect(2) = 6e-075 Identities = 133/252 (52%), Positives = 177/252 (69%), Gaps = 3/252 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S E E++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 649 VYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 708 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+G YYRRFV+GF++ A T L +DV F+W +C+ F+ L Sbjct: 709 IRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSQECEEGFVSL 768 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DAS VG+ VLM+ G I Y SR+L HE NYPT DL Sbjct: 769 KEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHGKVIAYASRQLMKHEGNYPTHDL 828 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 829 EMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 888 Query: 38632 PGKKNMVAYSLSRKQ 38588 PGK N+V +LSRK+ Sbjct: 889 PGKANVVVDALSRKR 903 Score = 199 bits (502), Expect = 4e-048 Identities = 112/225 (49%), Positives = 147/225 (64%), Gaps = 21/225 (9%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + +I SFLG AGYYRR + + Sbjct: 693 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKD 752 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY ++Y DAS++GLGCVLMQ G Sbjct: 753 VPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPY------MVYTDASRVGLGCVLMQHG 806 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIF Q + Sbjct: 807 KVIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 866 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV-------------SMGSLAMLQ 69028 L LR+R W+EL+ DYD+ I YHPGK NVV DALS K V +G+L + Sbjct: 867 LNLRQRRWMELVADYDLEIAYHPGKANVVVDALSRKRVGAALGQSVEVLVSEIGALRLCA 926 Query: 69029 VSKRPL 69046 V++ PL Sbjct: 927 VAREPL 932 Score = 170 bits (426), Expect(2) = e-133 Identities = 89/152 (58%), Positives = 109/152 (71%), Gaps = 13/152 (8%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 787 YMVYTDASRVGLGCVLMQHGKVIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYG 846 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 K +V+TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH GKANVV DALSRK Sbjct: 847 GKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPGKANVVVDALSRKRVGA 906 Query: 57655 ---------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK 57762 V +G+L V+R PL E A+ R+ + +K Sbjct: 907 ALGQSVEVLVSEIGALRLCAVAREPLGLEAVDRADLLTRVRLAQK 951 Score = 139 bits (347), Expect(2) = 4e-062 Identities = 71/146 (48%), Positives = 99/146 (67%), Gaps = 1/146 (0%) Frame = +2 Query: 67610 QLVERECLAYMAHIG-DTSVETNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLG 67786 +++E+ C AY+ I SV + I VV EF +VF + L +PP F I+++ G Sbjct: 430 KMIEKGCEAYLVTISMPESVGQVAVSDIRVVQEFQDVFQS-LQGLPPSQSDPFTIELEPG 488 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 T P+ PYR+ PAE+ E+K QL+DLL K FIR S S WGAP+LFVK+KD +CIDYR Sbjct: 489 TAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRPSTSPWGAPVLFVKKKDGSFRLCIDYR 548 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGAS 68047 +LN++T+ N YP+PRID+L D L+GA+ Sbjct: 549 ELNRVTVKNRYPLPRIDELLDQLRGAT 575 Score = 128 bits (319), Expect(2) = 4e-062 Identities = 81/208 (38%), Positives = 110/208 (51%), Gaps = 16/208 (7%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ+ + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 573 GATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSVF 632 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW---LSVQRR 68388 +++ EE E HLR V L+E+KL+ K SKC W + Sbjct: 633 QEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGH 692 Query: 68389 YHGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLST-------------IYDFLSIASTLT 68529 D +++ + + RP + F S+A +T Sbjct: 693 IVSAEGVSVDPEKIE------AIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMT 746 Query: 68530 RLT*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 +LT K+V F+WS ECE F LK LT+ +L LP + ++VY Sbjct: 747 KLTGKDVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVY 790 Score = 125 bits (312), Expect = 7e-026 Identities = 67/150 (44%), Positives = 95/150 (62%), Gaps = 2/150 (1%) Frame = -1 Query: 38242 LGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRI 38063 L KMYRDL+++Y W GM+ D+A++V+ C Q VK EH GG + L I EWKWD I Sbjct: 956 LRATKMYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFI 1015 Query: 38062 TMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVS 37883 TMD V GL + S+ D+I+VIVD+LTKSAHFL ++ LA+ ++ E+V+ HGVP++ Sbjct: 1016 TMDLVVGL-RVSRTKDAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEIVKLHGVPLN 1074 Query: 37882 I--ISDRGSQFTS*FKTTFQDELGTRVDLSAA 37793 + DR + + + E+G RV L A Sbjct: 1075 MKEAQDRQRSYADKRRRELEFEVGDRVYLKMA 1106 Score = 83.5 bits (203), Expect = 4e-013 Identities = 54/164 (32%), Positives = 79/164 (47%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R +SYAD RR L F V DR++L ++ ++G R KLSPRY+GPF+I+ Sbjct: 1075 MKEAQDRQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFKIVERV 1134 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 VAY L+LP A H VF VSM R + + L +L +T V +L R Sbjct: 1135 EPVAYRLELPDVMRAFHKVFHVSMLRKCLHKDDEALAKIPEDLQPNMTLEARPVRVLERR 1194 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + ++ L++ + W P R K+ F QV Sbjct: 1195 IKELRQKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQV 1238 Score = 71.8 bits (173), Expect(2) = 1e-016 Identities = 43/96 (44%), Positives = 60/96 (61%), Gaps = 2/96 (2%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IPEWK + I +D+VV L + K D IWVIV+RLTKSAHF+ ++ T LAK ++ EI Sbjct: 1007 IPEWKWDFITMDLVVGLRVSRTK-DAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEI 1065 Query: 69673 VRLHGVSISI--ISDRGTKFMSHFWLSMHKELGTRVDL 69780 V+LHGV +++ DR + + E+G RV L Sbjct: 1066 VKLHGVPLNMKEAQDRQRSYADKRRRELEFEVGDRVYL 1103 Score = 58.6 bits (139), Expect = 1e-005 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +3 Query: 58008 ATKMYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ATKMY DLK+++ W M+ D+ ++VA+C CQ VK EHQ GG L+ +P E Sbjct: 958 ATKMYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPE 1009 Score = 43.8 bits (101), Expect(2) = 1e-016 Identities = 20/46 (43%), Positives = 29/46 (62%) Frame = +2 Query: 69356 IYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +Y DLK++Y MK D+ ++V+ C CQ VK EHQ GG+ +P Sbjct: 961 MYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLP 1006 Score = 38.7 bits (88), Expect(2) = 6e-075 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F+ LM +F+ LD FVIIF+DDILV Sbjct: 615 FGLTNAPAVFMRLMNSVFQEFLDEFVIIFIDDILV 649 >emb|CAB71063.1| (AL137898) copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 263 bits (666), Expect(5) = e-132 Identities = 150/404 (37%), Positives = 221/404 (54%), Gaps = 10/404 (2%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H K +F G V L D +E++GKG++ I+ + + + +V YIP +K Sbjct: 343 NHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKT 402 Query: 6053 NLISVGQFDSTGY--------AAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 N++S+GQ GY ++ + S I K + R C+ M Sbjct: 403 NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYK 462 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFTKT 5724 ES LWH R GH++ G+++L K + GL + +CE C++GKQ ++SF K Sbjct: 463 EES----WLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKE 518 Query: 5723 PREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKW 5544 + L++ HTDV GP SLG S +++ FI DFSRK WVYFLK S+VF FKK+ Sbjct: 519 SSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKF 578 Query: 5543 KAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKIL 5364 KA VE +S L +K +RSD GGE+ F +C GIR VP +QNG+ ER N+ + Sbjct: 579 KAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTI 638 Query: 5363 NEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFG 5184 E ARSM + +PK WA V+ YL+NR P+ + K +E W ++ SHLR FG Sbjct: 639 LEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698 Query: 5183 CTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + HV EKR+KL+ K+ K IGY +N GY+ ++ +K + ++ FDE Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752 Score = 178 bits (448), Expect(5) = e-132 Identities = 97/256 (37%), Positives = 153/256 (58%), Gaps = 8/256 (3%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEES--EEVTREQVLR-RSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 E P + E T PT S EE + E+ R RS + + +L L E EP Sbjct: 781 EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMD 840 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RR 4597 F +A++ + W AMD+E++S++KNDTW LT LP G +A+ KWV++ K G+ R Sbjct: 841 FQKAIEKKT---WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY E+F+PV +L ++R+++ + A + QMD K+ FL+GDL+ Sbjct: 898 YKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP+G++V G+E V +L + LYGLKQAPR W + D + + +F K + Y Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017 Query: 4248 FKKYTNSYVFLLLYLDDMLIEGSS 4177 K + LY+DD++ G++ Sbjct: 1018 IKIQKEDILIACLYVDDLIFTGNN 1041 Score = 122 bits (304), Expect(2) = 2e-050 Identities = 58/133 (43%), Positives = 91/133 (67%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G +I Q+ Y KE+LK+FK+DD+ + TP+ KL + G V+ ++ ++GSL YLT Sbjct: 1078 GIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT 1137 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RPDI+++VG+ +R+ +P +H +A KRIL Y+KGT + G+ Y S++ LVGY+D D Sbjct: 1138 CTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSD 1197 Query: 87518 YVGYLVDRKSTTG 87480 + G + DRKST+G Sbjct: 1198 WGGDVDDRKSTSG 1210 Score = 108 bits (268), Expect = 1e-020 Identities = 65/236 (27%), Positives = 112/236 (46%), Gaps = 5/236 (2%) Frame = -2 Query: 88590 FQEEVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG--- 88420 ++++ ++ +WY+DS S HM G K++F L+E Sbjct: 324 YKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRL 383 Query: 88419 -RSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKH 88243 D I VYY+ + N+LS+ QL +K + + + + + + + + Sbjct: 384 KNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNR 443 Query: 88242 IYTVDTSTIYDKKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKED 88066 ++ ++ I + CL + K+ LWH R H + L L K++V GLP + Sbjct: 444 MFVLN---IRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHP-N 499 Query: 88065 KVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRN 87886 +VCE C LGK K SF + + LELIH D+CGP++ +S G+ Y + +DD++R Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559 Query: 87885 T 87883 T Sbjct: 560 T 560 Score = 108 bits (267), Expect(2) = 2e-021 Identities = 67/212 (31%), Positives = 112/212 (52%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y W RM+ + A D +W + KG + P ++EG+ D ++ + + K Sbjct: 18 YDNWSLRMKAILGAHD--VWEIVEKGFIEP---ENEGSLSQTQKDGLRDSRKR----DKK 68 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A C++ GL D F ++ TSAK+ W+ L+ S++G QV+K ++ +L E+EA +MK G Sbjct: 69 ALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEG 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 + + D +R TV N L G+ ++KVLR +E VT I E KDL MT++ Sbjct: 129 ELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIE 188 Query: 89788 ELVRNLKTYEMNVDKRGEGNKENFFGLKSTEQ 89693 +L+ +L+ YE K+ E E ++ T++ Sbjct: 189 QLLGSLQAYE-EKKKKKEDIAEQVLNMQITKE 219 Score = 106 bits (261), Expect(2) = 2e-050 Identities = 54/129 (41%), Positives = 77/129 (58%), Gaps = 1/129 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDN 87295 ++G + SKKQ V LST EAEYVAA C +W++ L + L E+ IF DN Sbjct: 1214 YIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDN 1273 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SAI + KN V H R+KH+D R+H++R+ V K + + + +Q+AD FT L RE+F Sbjct: 1274 KSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFI 1333 Query: 87114 RNRLELGMMK 87085 + R LG+ K Sbjct: 1334 KMRSLLGVAK 1343 Score = 90.1 bits (220), Expect(3) = 7e-028 Identities = 49/146 (33%), Positives = 81/146 (54%), Gaps = 2/146 (1%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG VERK++ +LE+AR++L +LP W E + YL+NR + K + Sbjct: 626 QQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVS 65348 + P S+L+VFG + + K K + ++ +IF+GY N+ GYK+ + TKK +S Sbjct: 686 GRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIIS 745 Query: 65349 RDVSF-YENVFPFTLFEVDFSFSTTLEK 65429 R++ F E + + E D++F E+ Sbjct: 746 RNIVFDEEGEWDWNSNEEDYNFFPHFEE 773 Score = 57.4 bits (136), Expect(3) = 7e-028 Identities = 33/105 (31%), Positives = 53/105 (50%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C CL Q + FP ++++ + + +L+ D+ P + YFL+ +DDFSR T Sbjct: 502 CEGCLLGKQFK-MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKT 560 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 W L KS + K F + V + + IK++R+ G EF S E Sbjct: 561 WVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKE 605 Score = 56.6 bits (134), Expect(5) = e-132 Identities = 31/103 (30%), Positives = 58/103 (56%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM D+G LG+++ ++ + + ++QE Y ++VL +F+++D+ P TP+ Sbjct: 1052 MTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKIDDSNPVCTPMECG 1109 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 KLSK++ + V+ +LV + + CTRPD LY Sbjct: 1110 IKLSKKEEGEGVDPTTFKSLV-------GSLRYLTCTRPDILY 1145 Score = 39.5 bits (90), Expect(5) = e-132 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 10/85 (11%) Frame = -2 Query: 6489 DERTNQHG*SKSKN*GK--PPNR---SNVTCLNCGEK*HFWTSYTKPKKKQNQKFGDDND 6325 ++ TNQ G + S+ GK P +R S+V C NCG+ H+ + P N+KF + Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP---SNKKFEEKAH 307 Query: 6324 SVNSTEDIGDALILSVNSPVE-----SWILDSGAS 6235 V D L+++ E W LDSGAS Sbjct: 308 YVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGAS 342 Score = 28.6 bits (62), Expect(5) = e-132 Identities = 24/102 (23%), Positives = 56/102 (54%), Gaps = 3/102 (2%) Frame = -3 Query: 6815 QGIFDA*MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFE--DEIKAL-ILMSSLPESW 6645 +G F+A LQM E VSD+ F+ +++ N++ N E D+++ + ++ SL + Sbjct: 117 RGEFEA----LQMKEGELVSDY---FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKF 169 Query: 6644 DTVVAVISSSRGSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSV 6510 + +V VI ++ E + +++ + + +K++ D + L++ Sbjct: 170 EHIVTVIEETKDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNM 214 Score = 26.2 bits (56), Expect(3) = 7e-028 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 64472 LNFYNPLMSCMSHGNSTD-YLWHNRLGHVSF 64561 LN N + C+ + +LWH R GH++F Sbjct: 447 LNIRNDIAQCLKMCYKEESWLWHLRFGHLNF 477 Score = 23.5 bits (49), Expect(2) = 2e-021 Identities = 10/39 (25%), Positives = 18/39 (45%) Frame = -2 Query: 89634 KRGLNATKKSPPLKEKNPERSQNGGCFKCGKTDHQIKDC 89518 +RG N+++ K+ + C+ CGK H +C Sbjct: 256 QRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294 >gb|AAD38284.1|AC007789_10 (AC007789) putative polyprotein [Oryza sativa] Length = 1220 Score = 406 bits (1032), Expect(2) = e-115 Identities = 212/466 (45%), Positives = 297/466 (63%), Gaps = 3/466 (0%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EHE +LR+VL+ L++ +LYAKFSKC+FWL V F GH+++ +G+ VD +E++ W P Sbjct: 749 EHEQHLRLVLEKLKEHQLYAKFSKCDFWLSEVKFLGHIITAQGVAVDSSNVESVTKWTPP 808 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSA 38972 +V+++ SF+GL YYRRF+E FS A T L +D F W +CD SF +LK+ + SA Sbjct: 809 KTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSA 868 Query: 38971 PILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVF 38792 P+L L + F +YCDAS G+ VLM++G + Y SR+L+ HE NYPT DLELAV+V Sbjct: 869 PVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAVVVH 928 Query: 38791 ALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMV 38612 AL IWRHYL G + E YTDH SL+ I Q DLN R RW+EL+KDYD+SI YHPGK N+V Sbjct: 929 ALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVV 988 Query: 38611 AYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRN 38432 A +LSRK + +C E L+ + + I R V A + + +L D+ Sbjct: 989 ADALSRKSYCNALCTEDMCEELQQELE-------RLNVGIVEHRFVAA-LEARPTLVDQF 1040 Query: 38431 RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRY 38252 R Q D ++ L+ + G D + R+ VP + LIL+EAH+ +Y Sbjct: 1041 RAAQVNDPEIVELKKNMRVGKARDFLEDEHRTIWMGERLCVPDDKELKDLILTEAHQTQY 1100 Query: 38251 SIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKW 38072 SIH G+ KMY+DL++ + W MR +IA+FV+ C Q+VK EH R G F+ L I +WKW Sbjct: 1101 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPVGLFQPLQIPKWKW 1160 Query: 38071 DRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARI 37925 + I MDF+ GLP+TS G DSI+V+VD+LTK AHF+PV + ++ +LA + Sbjct: 1161 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKKLAEL 1209 Score = 300 bits (761), Expect(3) = e-132 Identities = 152/278 (54%), Positives = 192/278 (68%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T PI PYRMA EL E+K Q+ E L KG+IRPS +PWGA V+FV+KKD++ RMC++YR Sbjct: 582 TAPIYKRPYRMAANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYR 641 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+KNKY +P IDD FD ++GA VFSKIDL SGY QL+I ++PKTAF T+ G Y Sbjct: 642 ALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTQYGLY 701 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E V SFGL NAPA FM LMN +F +L+ FV+VFIDDILIYSK + Sbjct: 702 ECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKLEEEHEQHLRLVLEKL 761 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 LYAKF KC+F L+ V FLGH+++ GV VD S +E+V W P VS + SF+GLA Sbjct: 762 KEHQLYAKFSKCDFWLSEVKFLGHIITAQGVAVDSSNVESVTKWTPPKTVSQIRSFLGLA 821 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRFI FS IA +T L K++ F W+ EC++SF+ Sbjct: 822 GYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFE 859 Score = 216 bits (545), Expect = 3e-053 Identities = 145/374 (38%), Positives = 215/374 (56%), Gaps = 11/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +++ + + VD +E++ W P +V QI SFLGLAGYYRR S I+ P Sbjct: 786 IITAQGVAVDSSNVESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKD 845 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + C + L K L+L P Q ++ +Y DAS+ GLGCVLMQ+G+V Sbjct: 846 EKFKWTAECDKSFEELKKKLVSAPVLIL---PDQMKD-FQVYCDASRHGLGCVLMQEGRV 901 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLEL VV ALKIW +YL G V+T+H+SL+YIF Q DL Sbjct: 902 VAYASRQLRPHEGNYPTHDLELAVVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLN 961 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV--SMGSLAMLQVSKRPLAK-DVQL 69064 LR+R WLEL+KDYDM+I YHPGK NVVADALS K+ ++ + M + ++ L + +V + Sbjct: 962 LRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCNALCTEDMCEELQQELERLNVGI 1021 Query: 69065 LSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEG 69244 + + FV + + L+ +F + Q +D ++ +++ + +A+ + D Sbjct: 1022 VEHRFVAAL--EARPTLV--------DQFRAAQVNDPEIVELKKNMRVGKARDFLEDEHR 1071 Query: 69245 VLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVS 69424 + + +CVP D + G +Y DLK+ + M+R+I +FV+ Sbjct: 1072 TIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVA 1131 Query: 69425 RCLNCQQVKHEHQKPGGV--TLRIP 69493 C CQ+VK EHQ+P G+ L+IP Sbjct: 1132 LCDVCQRVKAEHQRPVGLFQPLQIP 1156 Score = 182 bits (458), Expect(3) = e-132 Identities = 98/193 (50%), Positives = 128/193 (65%), Gaps = 1/193 (0%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F VYCD S GLG VLM E V+ YASRQL+ HE NYPTHDL+LA VV ALK WRHYL Sbjct: 879 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAVVVHALKIWRHYLI 938 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 G +CEVYTDH+SL Y+FTQ DLNLR+RRW+EL+KD D++I YH GKANVVADALSRK Sbjct: 939 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRK--- 995 Query: 57664 MGSLAHSQVSRRPLAREVQTLANDFMRLEV-LEKGGFFACVEARSSFLEKIKGNQFDDEK 57840 S + + L + RL V + + F A +EAR + +++ + Q +D + Sbjct: 996 ------SYCNALCTEDMCEELQQELERLNVGIVEHRFVAALEARPTLVDQFRAAQVNDPE 1049 Query: 57841 LRRI*DMVLRGEAK 57882 + + + G+A+ Sbjct: 1050 IVELKKNMRVGKAR 1063 Score = 141 bits (351), Expect(2) = 1e-065 Identities = 67/128 (52%), Positives = 91/128 (70%) Frame = +2 Query: 67679 LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQ 67858 LE I +V E+ EVFP DL +PP +I+F ID+ GT PI+ PYR+ EL E+K Q+ Sbjct: 546 LEEIPIVCEYPEVFPEDLTTMPPKREIEFRIDLAPGTAPIYKRPYRMAANELAEVKKQVD 605 Query: 67859 DLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQ 68038 + L K +IR S S WGAP++FV++KD+ MC+DYR LN++TI N YP+PRIDDLFD L+ Sbjct: 606 EQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLK 665 Query: 68039 GASVSPRL 68062 GA V ++ Sbjct: 666 GAKVFSKI 673 Score = 138 bits (345), Expect(2) = 1e-065 Identities = 91/208 (43%), Positives = 118/208 (55%), Gaps = 11/208 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQL++REEDI KTAF T+YG YE VM F LTNA A FM+LMN F Sbjct: 666 GAKVFSKIDLRSGYHQLRIREEDIPKTAFTTQYGLYECTVMSFGLTNAPAFFMNLMNKVF 725 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 ++ +EEHE HLR V LKE +LY KFSKC+ WLS + ++ G Sbjct: 726 MEFLDKFVVVFIDDILIYSKLEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLS-EVKFLG 784 Query: 68398 ------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*K 68544 G D N + +R L+ Y +F IA +T+L K Sbjct: 785 HIITAQGVAVDSSNVESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKK 844 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 + F W+ EC+ SF++LK L +A +L LP + + F VY Sbjct: 845 DEKFKWTAECDKSFEELKKKLVSAPVLILPDQMKDFQVY 883 Score = 100 bits (246), Expect = 4e-018 Identities = 51/100 (51%), Positives = 65/100 (65%) Frame = +3 Query: 57837 EAETNLRYGIARRGKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATK 58016 E + N+R G AR E DE + + ER+CVP +L IL EAH ++YSIHPG+TK Sbjct: 1052 ELKKNMRVGKARDFLE---DEHRTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTK 1108 Query: 58017 MYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGG 58136 MY DLK+ F W M+ +I +FVA C CQ+VK EHQRP G Sbjct: 1109 MYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPVG 1148 Score = 78.8 bits (191), Expect = 1e-011 Identities = 48/138 (34%), Positives = 70/138 (49%), Gaps = 1/138 (0%) Frame = +1 Query: 69259 GSYMC-SSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFE 69435 G +C D++L L + E + YSIHP +TK L+ + + + + F Sbjct: 1076 GERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDV 1135 Query: 69436 LSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFV 69615 +A + IP+WK E I +D + L RT D IWV+V+RLTK AHF+ Sbjct: 1136 CQRVKAEHQRPVGLFQPLQIPKWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFI 1195 Query: 69616 PVQTTYN*KKLAKIYIREI 69672 PV TTY KKLA++ + I Sbjct: 1196 PVHTTYTGKKLAELCLARI 1214 Score = 53.9 bits (127), Expect = 3e-004 Identities = 33/118 (27%), Positives = 55/118 (45%), Gaps = 1/118 (0%) Frame = -3 Query: 40718 FQRLAPSIFSGAIGE-DAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY*E 40542 F R+ P FS A+++ ++L L D F HQ +GPA WW + Sbjct: 95 FLRVRPPTFSSTTNPMKANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDNHMT 154 Query: 40541 SRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFSRHA 40365 +RP G+ ++W++F + F + V + F L G+ T++EY F +R+A Sbjct: 155 TRPPGT-EVTWAEFCRNFRKAQVLDGVVAQKKREFRALHQGNRTVTEYLHEFDRLARYA 212 Score = 51.2 bits (120), Expect = 0.002 Identities = 39/126 (30%), Positives = 57/126 (44%) Frame = +1 Query: 54634 KVETSDAVITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGE 54813 + + + V+ TF V VLFD G S+ F L + L P+ V T Sbjct: 390 EAQAAPEVVLGTFPVNSIPATVLFDSGAMHSFIYKKFVGMHGLIREELSTPMRVHTPGNS 449 Query: 54814 SVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKP 54993 S V+ S + S +LI+L+ D DVILGM WL+ ++DC TVTL Sbjct: 450 STSVQFS-PSVTIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCANCTVTLINE 508 Query: 54994 GTDSLV 55011 +++V Sbjct: 509 KGETVV 514 Score = 43.4 bits (100), Expect = 0.51 Identities = 34/110 (30%), Positives = 46/110 (40%) Frame = +3 Query: 55758 EVETCDVVITCTLLVCDCMTFVLFDPRYTFSYVSSSFATGLDLYCDFLDIPIRVSTTVGE 55937 E + V+ T V VLFD S++ F L + L P+RV T G Sbjct: 390 EAQAAPEVVLGTFPVNSIPATVLFDSGAMHSFIYKKFVGMHGLIREELSTPMRVHTP-GN 448 Query: 55938 SVIVVKVYRSCLVTFVGSNTYVDFIILEMVVFDVIQGMTWLSPNFAIIDC 56087 S V+ S + S + I+LE DVI GM WL+ +IDC Sbjct: 449 SSTSVQFSPSVTIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDC 498 Score = 41.4 bits (95), Expect = 2.0 Identities = 26/101 (25%), Positives = 48/101 (46%), Gaps = 1/101 (0%) Frame = +2 Query: 53648 KFLKLKPPVFKGAESE-DAYDFLVDCHELLHKMDIVERFGVEFVTYQFKRDAKMWWQSYV 53824 +FL+++PP F + A D+L + L+ + ++ V F T+Q + A WW +++ Sbjct: 94 EFLRVRPPTFSSTTNPMKANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDNHM 153 Query: 53825 EFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLSLEQG 53950 +P + WA F F + + + EF +L QG Sbjct: 154 TTRPP-GTEVTWAEFCRNFRKAQVLDGVVAQKKREFRALHQG 194 Score = 39.5 bits (90), Expect(3) = e-132 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = +3 Query: 56316 VSIVCEFLDVFPADLPSMPLDRDIDFCIDVERLLAP 56423 + IVCE+ +VFP DL +MP R+I+F ID+ AP Sbjct: 549 IPIVCEYPEVFPEDLTTMPPKREIEFRIDLAPGTAP 584 Score = 38.3 bits (87), Expect(2) = e-115 Identities = 16/35 (45%), Positives = 25/35 (70%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F++LM ++F LD FV++F+DDIL+ Sbjct: 708 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILI 742 >emb|CAB50739.1| (AJ243722) putative transposase [Ralstonia sp. CH34] Length = 411 Score = 331 bits (840), Expect(2) = e-131 Identities = 165/280 (58%), Positives = 196/280 (69%) Frame = +1 Query: 20377 LIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTY 20556 L+ARG + V L V+R+ + R+ +W DGRR+R DDT ++ IH ++ LPTY Sbjct: 127 LLARGRPMKTVCDVLGVARSAVAAKQARSSEWRDGRRARQYDDTALVAEIHELVAGLPTY 186 Query: 20557 GYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESN 20736 GYRRVWALLRR EL G +NAKRVYR+M + LLL R+P R H GRVAV SN Sbjct: 187 GYRRVWALLRRSHELSGASPVNAKRVYRVMHDHQLLL-RRPGRRLDTRRHDGRVAVDRSN 245 Query: 20737 QRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGN 20916 RWCSDGFEF CD+G LRVTFALDC DREA+ WA TTGG + + V+DVML AVE+RFG Sbjct: 246 TRWCSDGFEFRCDDGSPLRVTFALDCHDREAISWAATTGGHSGDIVRDVMLAAVEQRFGA 305 Query: 20917 DLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYIS 21096 +EWL+DNGS Y + TR FAR LGLEP T VRSP+SNG+AESFVKT+KRDYI+ Sbjct: 306 VQTEQTIEWLSDNGSAYIDHRTRTFARELGLEPLTTPVRSPQSNGMAESFVKTMKRDYIA 365 Query: 21097 IMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLR 21216 M KPD TA L AFE YN+WHPH AL YRSPRE+ R Sbjct: 366 FMNKPDVPTALSQLTVAFEQYNDWHPHKALKYRSPREFRR 405 Score = 168 bits (422), Expect(2) = e-131 Identities = 81/110 (73%), Positives = 97/110 (87%) Frame = +2 Query: 20054 PEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQ 20233 PE+RRRR+ QEK+AIVQ++ EPG TVS VAR+HG+ +Q+F WRKQYQEGSL AV+AGE Sbjct: 19 PERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFAWRKQYQEGSLAAVSAGEA 78 Query: 20234 VVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLL 20383 VVPAS+LAAAMK+I+ELQRLLGKKT E E+LKEAVEYGR+K WIA +PLL Sbjct: 79 VVPASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKNWIARSPLL 128 >gb|AAD50001.1|AC007259_14 (AC007259) Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 263 bits (666), Expect(4) = e-130 Identities = 150/404 (37%), Positives = 221/404 (54%), Gaps = 10/404 (2%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H K +F G V L D +E++GKG++ I+ + + + +V YIP +K Sbjct: 343 NHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKT 402 Query: 6053 NLISVGQFDSTGY--------AAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 N++S+GQ GY ++ + S I K + R C+ M Sbjct: 403 NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYK 462 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFTKT 5724 ES LWH R GH++ G+++L K + GL + +CE C++GKQ ++SF K Sbjct: 463 EES----WLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKE 518 Query: 5723 PREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKW 5544 + L++ HTDV GP SLG S +++ FI DFSRK WVYFLK S+VF FKK+ Sbjct: 519 SSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKF 578 Query: 5543 KAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKIL 5364 KA VE +S L +K +RSD GGE+ F +C GIR VP +QNG+ ER N+ + Sbjct: 579 KAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTI 638 Query: 5363 NEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFG 5184 E ARSM + +PK WA V+ YL+NR P+ + K +E W ++ SHLR FG Sbjct: 639 LEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698 Query: 5183 CTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + HV EKR+KL+ K+ K IGY +N GY+ ++ +K + ++ FDE Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752 Score = 178 bits (448), Expect(4) = e-130 Identities = 97/256 (37%), Positives = 153/256 (58%), Gaps = 8/256 (3%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEES--EEVTREQVLR-RSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 E P + E T PT S EE + E+ R RS + + +L L E EP Sbjct: 781 EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMD 840 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RR 4597 F +A++ + W AMD+E++S++KNDTW LT LP G +A+ KWV++ K G+ R Sbjct: 841 FQKAIEKKT---WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY E+F+PV +L ++R+++ + A + QMD K+ FL+GDL+ Sbjct: 898 YKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP+G++V G+E V +L + LYGLKQAPR W + D + + +F K + Y Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017 Query: 4248 FKKYTNSYVFLLLYLDDMLIEGSS 4177 K + LY+DD++ G++ Sbjct: 1018 IKIQKEDILIACLYVDDLIFTGNN 1041 Score = 124 bits (308), Expect(2) = 8e-051 Identities = 59/133 (44%), Positives = 91/133 (68%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G +I Q+ Y KE+LK+FKMDD+ + TP+ KL + G V+ ++ ++GSL YLT Sbjct: 1078 GIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT 1137 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RPDI+++VG+ +R+ +P +H +A KRIL Y+KGT + G+ Y S++ LVGY+D D Sbjct: 1138 CTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSD 1197 Query: 87518 YVGYLVDRKSTTG 87480 + G + DRKST+G Sbjct: 1198 WGGDVDDRKSTSG 1210 Score = 108 bits (268), Expect = 1e-020 Identities = 65/236 (27%), Positives = 112/236 (46%), Gaps = 5/236 (2%) Frame = -2 Query: 88590 FQEEVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG--- 88420 ++++ ++ +WY+DS S HM G K++F L+E Sbjct: 324 YKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRL 383 Query: 88419 -RSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKH 88243 D I VYY+ + N+LS+ QL +K + + + + + + + + Sbjct: 384 KNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNR 443 Query: 88242 IYTVDTSTIYDKKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKED 88066 ++ ++ I + CL + K+ LWH R H + L L K++V GLP + Sbjct: 444 MFVLN---IRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHP-N 499 Query: 88065 KVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRN 87886 +VCE C LGK K SF + + LELIH D+CGP++ +S G+ Y + +DD++R Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559 Query: 87885 T 87883 T Sbjct: 560 T 560 Score = 108 bits (266), Expect = 2e-020 Identities = 64/196 (32%), Positives = 105/196 (52%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y W RM+ + A D +W + KG + P ++EG+ D ++ + + K Sbjct: 18 YDNWSLRMKAILGAHD--VWEIVEKGFIEP---ENEGSLSQTQKDGLRDSRKR----DKK 68 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A C++ GL D F ++ TSAK+ W+ L+ S++G QV+K ++ +L E+EA +MK G Sbjct: 69 ALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEG 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 + + D +R TV N L G+ ++KVLR +E VT I E KDL MT++ Sbjct: 129 ELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIE 188 Query: 89788 ELVRNLKTYEMNVDKR 89741 +L+ +L+ YE K+ Sbjct: 189 QLLGSLQAYEEKKKKK 204 Score = 106 bits (261), Expect(2) = 8e-051 Identities = 54/129 (41%), Positives = 77/129 (58%), Gaps = 1/129 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDN 87295 ++G + SKKQ V LST EAEYVAA C +W++ L + L E+ IF DN Sbjct: 1214 YIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDN 1273 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SAI + KN V H R+KH+D R+H++R+ V K + + + +Q+AD FT L RE+F Sbjct: 1274 KSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFI 1333 Query: 87114 RNRLELGMMK 87085 + R LG+ K Sbjct: 1334 KMRSLLGVAK 1343 Score = 90.1 bits (220), Expect(3) = 7e-028 Identities = 49/146 (33%), Positives = 81/146 (54%), Gaps = 2/146 (1%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG VERK++ +LE+AR++L +LP W E + YL+NR + K + Sbjct: 626 QQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVS 65348 + P S+L+VFG + + K K + ++ +IF+GY N+ GYK+ + TKK +S Sbjct: 686 GRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIIS 745 Query: 65349 RDVSF-YENVFPFTLFEVDFSFSTTLEK 65429 R++ F E + + E D++F E+ Sbjct: 746 RNIVFDEEGEWDWNSNEEDYNFFPHFEE 773 Score = 57.4 bits (136), Expect(3) = 7e-028 Identities = 33/105 (31%), Positives = 53/105 (50%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C CL Q + FP ++++ + + +L+ D+ P + YFL+ +DDFSR T Sbjct: 502 CEGCLLGKQFK-MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKT 560 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 W L KS + K F + V + + IK++R+ G EF S E Sbjct: 561 WVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKE 605 Score = 55.8 bits (132), Expect(4) = e-130 Identities = 31/103 (30%), Positives = 58/103 (56%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM D+G LG+++ ++ + + ++QE Y ++VL +F+++D+ P TP+ Sbjct: 1052 MTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKMDDSNPVCTPMECG 1109 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 KLSK++ + V+ +LV + + CTRPD LY Sbjct: 1110 IKLSKKEEGEGVDPTTFKSLV-------GSLRYLTCTRPDILY 1145 Score = 40.2 bits (92), Expect(4) = e-130 Identities = 31/85 (36%), Positives = 46/85 (53%), Gaps = 10/85 (11%) Frame = -2 Query: 6489 DERTNQHG*SKSKN*GK--PPNR---SNVTCLNCGEK*HFWTSYTKPKKKQNQKFGDDND 6325 ++ TNQ G + S+ GK P +R S+V C NCG+ H+ + P N+KF + + Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP---SNKKFEEKAN 307 Query: 6324 SVNSTEDIGDALILSVNSPVE-----SWILDSGAS 6235 V D L+++ E W LDSGAS Sbjct: 308 YVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGAS 342 Score = 26.2 bits (56), Expect(3) = 7e-028 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 64472 LNFYNPLMSCMSHGNSTD-YLWHNRLGHVSF 64561 LN N + C+ + +LWH R GH++F Sbjct: 447 LNIRNDIAQCLKMCYKEESWLWHLRFGHLNF 477 >gb|AAC26240.1| (AF077407) contains similarity to reverse transcriptases (PFam: rvt.hmm, score: 116.22) [Arabidopsis thaliana] Length = 1322 Score = 323 bits (820), Expect(2) = e-127 Identities = 176/372 (47%), Positives = 237/372 (63%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 LV++G ++ +IS L A++M+ K C YL+ ++ ++ + +V+EF DVF Sbjct: 441 LVYQGVRPTSGSLVISALQAEKMIEKGCEAYLMTISMPESVGQVAVSDIRVVQEFEDVFQ 500 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 + L SR F T +S PYRMAPAE+ ELK QL+ Sbjct: 501 S---LQELPPSRSDP-------------FTIELEPGTASLSKAPYRMAPAEMAELKKQLE 544 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 + LGK FIRPS +PW A +LF+KKKD SFR+CI+YR LN+VT+KNKY +P ID+ D ++ Sbjct: 545 DFLGKRFIRPSTSPWRAPMLFMKKKDGSFRLCIDYRGLNQVTVKNKYPLPRIDELLDQLR 604 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDLTS Y Q+ I +V KTAF TR GH+EF+V FGL NAPAAFM LMN +F Sbjct: 605 GATCFSKIDLTSDYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVF 664 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FIDDIL+YSKS + + L+AK KC F + FLGH Sbjct: 665 QEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVKEKLREQKLFAKLSKCSFWQREMGFLGH 724 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 +VS +GV VD KIEA++ W +PTN ++ SF+GLA YYRRF+ F+S+A +T LT ++ Sbjct: 725 IVSAEGVSVDPEKIEAIRDWPRPTNAVEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKD 784 Query: 57206 VPFIWSGECEESF 57244 VPF+WS ECEE F Sbjct: 785 VPFVWSPECEEGF 797 Score = 279 bits (706), Expect(2) = 2e-077 Identities = 134/252 (53%), Positives = 181/252 (71%), Gaps = 3/252 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V + LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 681 VYSKSPEEHEVHLRRVKEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 740 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ E+ SF+GL YYRRFV+GF++ A T L +DV F+W +C+ F+ L Sbjct: 741 IRDWPRPTNAVEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 800 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G +++Y DASGVG+ VLM++G I Y SR+L+ HE NYPT DL Sbjct: 801 KEMLTSTPVLALPEHGEPYSVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDL 860 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 861 EMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 920 Query: 38632 PGKKNMVAYSLSRKQ 38588 PGK N++ +LSRK+ Sbjct: 921 PGKANVIVDALSRKR 935 Score = 201 bits (507), Expect = 1e-048 Identities = 107/210 (50%), Positives = 139/210 (65%), Gaps = 8/210 (3%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + ++I SFLGLAGYYRR + + Sbjct: 725 IVSAEGVSVDPEKIEAIRDWPRPTNAVEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKD 784 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY +Y DAS +GLGCVLMQ+G Sbjct: 785 VPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPYS------VYTDASGVGLGCVLMQRG 838 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL+ HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIF Q + Sbjct: 839 KVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 898 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV 69001 L LR+R W+EL+ DYD+ I YHPGK NV+ DALS K V Sbjct: 899 LNLRQRRWMELVADYDLEIAYHPGKANVIVDALSRKRV 936 Score = 185 bits (464), Expect(2) = 2e-062 Identities = 103/242 (42%), Positives = 140/242 (57%) Frame = -1 Query: 38230 KMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDF 38051 KMYRDL+++Y W GM+ D+A++V+ C Q VK EH GG + L I EWKWD ITMDF Sbjct: 952 KMYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEHQVPGGVLQSLPIPEWKWDFITMDF 1011 Query: 38050 VAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISD 37871 V GLP S+ D+I+VIVD+LTKSAHFL ++ R+ G Sbjct: 1012 VVGLP-VSRTKDAIWVIVDRLTKSAHFLAIRK---------------NRWSG-------- 1047 Query: 37870 RGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQF 37691 E+GT+V +S A+HPQ D QSE TIQ LEDML +CVL++GG+ Sbjct: 1048 -------------GAEMGTKVQMSTAYHPQRDGQSERTIQTLEDMLRMCVLDWGGRWADH 1094 Query: 37690 SPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFK 37511 L +FAYN+ + +I M F LYGR CR+ + W + + G D +Q LE++RV K Sbjct: 1095 FSLVEFAYNNSYQMSIGMTPFETLYGRPCRTPLCWTQVGERSIYGADYVQETLERIRVLK 1154 Query: 37510 ID 37505 ++ Sbjct: 1155 LN 1156 Score = 162 bits (406), Expect(2) = e-127 Identities = 77/116 (66%), Positives = 91/116 (78%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GLG VLM VI YASRQL+ HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 819 YSVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYG 878 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 K +V+TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH GKANV+ DALSRK Sbjct: 879 GKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPGKANVIVDALSRK 934 Score = 132 bits (328), Expect(2) = 4e-060 Identities = 87/208 (41%), Positives = 113/208 (53%), Gaps = 14/208 (6%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ+ + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 605 GATCFSKIDLTSDYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVF 664 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 +++ EEHE HLR V L+E+KL+ K SKC W +R G Sbjct: 665 QEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVKEKLREQKLFAKLSKCSFW----QREMG 720 Query: 68398 ---------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRL 68535 G D + ++ +R L+ Y F S+A +T+L Sbjct: 721 FLGHIVSAEGVSVDPEKIEAIRDWPRPTNAVEIRSFLGLAGYYRRFVKGFASMAQPMTKL 780 Query: 68536 T*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 T K+V F+WS ECE F LK LT+ +L LP E + VY Sbjct: 781 TGKDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPYSVY 822 Score = 129 bits (321), Expect(2) = 4e-060 Identities = 67/146 (45%), Positives = 96/146 (64%), Gaps = 1/146 (0%) Frame = +2 Query: 67610 QLVERECLAYMAHIG-DTSVETNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLG 67786 +++E+ C AY+ I SV + I VV EF +VF + L ++PP F I+++ G Sbjct: 462 KMIEKGCEAYLMTISMPESVGQVAVSDIRVVQEFEDVFQS-LQELPPSRSDPFTIELEPG 520 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 T + PYR+ PAE+ E+K QL+D L K FIR S S W AP+LF+K+KD +CIDYR Sbjct: 521 TASLSKAPYRMAPAEMAELKKQLEDFLGKRFIRPSTSPWRAPMLFMKKKDGSFRLCIDYR 580 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGAS 68047 LN++T+ N YP+PRID+L D L+GA+ Sbjct: 581 GLNQVTVKNKYPLPRIDELLDQLRGAT 607 Score = 122 bits (302), Expect(2) = 1e-033 Identities = 71/160 (44%), Positives = 86/160 (53%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IPEWK + I +D VV L + K D IWVIV+RLTKSAHF+ ++ Sbjct: 999 IPEWKWDFITMDFVVGLPVSRTK-DAIWVIVDRLTKSAHFLAIR---------------- 1041 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 + W S E+GT+V +ST +HPQ D QSE IQ LEDML Sbjct: 1042 -------------------KNRW-SGGAEMGTKVQMSTAYHPQRDGQSERTIQTLEDMLR 1081 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 CV+D+G W LVEFAYNNSY +S M PFE LYGR Sbjct: 1082 MCVLDWGGRWADHFSLVEFAYNNSYQMSIGMTPFETLYGR 1121 Score = 84.3 bits (205), Expect(2) = 2e-062 Identities = 55/164 (33%), Positives = 79/164 (47%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R +SYAD RR L F V DR++L ++ ++G R KLSPRY+GPF I+ Sbjct: 1157 MKEAQDRKRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFRIVERV 1216 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+L A H VF +SM R + + VL +L +T V +L R Sbjct: 1217 GPVAYRLELLDVMRAFHKVFHLSMLRKCLHKDDEVLAKIPEDLQPNMTLETRPVRVLERR 1276 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + R+ L++ + W P R K+ F QV Sbjct: 1277 IKELRRKKIPLIKVLWDCDGVTEETWEPEARMKARFKTWFEKQV 1320 Score = 64.4 bits (154), Expect = 2e-007 Identities = 40/109 (36%), Positives = 54/109 (48%) Frame = +3 Query: 57837 EAETNLRYGIARRGKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATK 58016 + E NLR RR E V D + + VD L + A ATK Sbjct: 896 QPELNLRQ---RRWMELVADYDLEIAYHPGKANVIVDALSRKRVGAAPGQSVEALVRATK 952 Query: 58017 MYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 MY DLK+++ W M+ D+ ++VA+C CQ VK EHQ PGG L+ +P E Sbjct: 953 MYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEHQVPGGVLQSLPIPE 1001 Score = 51.2 bits (120), Expect(2) = 1e-033 Identities = 23/46 (50%), Positives = 31/46 (67%) Frame = +2 Query: 69356 IYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +Y DLK++Y MKRD+ ++V+ C CQ VK EHQ PGGV +P Sbjct: 953 MYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEHQVPGGVLQSLP 998 Score = 47.6 bits (111), Expect = 0.026 Identities = 39/136 (28%), Positives = 68/136 (49%), Gaps = 2/136 (1%) Frame = +1 Query: 54787 IHVSTHVGESVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCN 54966 +HV G+ + V + + G + DLII + +DVILGM WL LDC+ Sbjct: 369 LHVKVAGGQVLAVLGRAKGVDIQIAGESMPADLIISLVELYDVILGMDWLDHYRVHLDCH 428 Query: 54967 AKTVTLAKPGTDSLV*EGDYISTPVRIISCLRAKRMVSKGFLDFLSHIK--DDTSKVSLI 55140 V+ +P LV +G ++ +IS L+A++M+ KG +L I + +V+ + Sbjct: 429 RGRVSFERP-EGRLVYQGVRPTSGSLVISALQAEKMIEKGCEAYLMTISMPESVGQVA-V 486 Query: 55141 ESLLIVREMIHSFASVHK 55194 + +V+E F S+ + Sbjct: 487 SDIRVVQEFEDVFQSLQE 504 Score = 40.2 bits (92), Expect(2) = 2e-077 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 647 FGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 681 >gb|AAC74650.1| (AE000253) orf, hypothetical protein [Escherichia coli] Length = 218 Score = 460 bits (1172), Expect = e-126 Identities = 218/218 (100%), Positives = 218/218 (100%) Frame = +1 Query: 20608 MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGER 20787 MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGER Sbjct: 1 MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGER 60 Query: 20788 LRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCY 20967 LRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCY Sbjct: 61 LRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCY 120 Query: 20968 RANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEA 21147 RANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEA Sbjct: 121 RANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEA 180 Query: 21148 FEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI 21261 FEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI Sbjct: 181 FEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI 218 >emb|CAB75469.1| (AL138659) copia-type reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1272 Score = 266 bits (672), Expect(4) = e-125 Identities = 151/404 (37%), Positives = 221/404 (54%), Gaps = 10/404 (2%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H K +F G V L D +E++GKG++ I+ + + + +V YIP +K Sbjct: 343 NHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKT 402 Query: 6053 NLISVGQFDSTGY--------AAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 N++S+GQ GY ++ K S I K + R C+ M Sbjct: 403 NILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYK 462 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFTKT 5724 ES LWH R GH++ G+++L K + GL + +CE C++G Q ++SF K Sbjct: 463 EES----WLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKE 518 Query: 5723 PREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKW 5544 + L++ HTDV GP SLG S +++ FI DFSRK WVYFLK S+VF FKK+ Sbjct: 519 SSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKF 578 Query: 5543 KAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKIL 5364 KA VE +S L +K +RSD+GGE+ F +C GIR VP +QNG+ ER N+ + Sbjct: 579 KAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTI 638 Query: 5363 NEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFG 5184 E ARSM + +PK WA V+ YL+NR P+ + K +E W ++ SHLR FG Sbjct: 639 LEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698 Query: 5183 CTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + HV EKRNKL+ K+ K IGY +N GY+ ++ +K + ++ FDE Sbjct: 699 SIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752 Score = 180 bits (453), Expect(4) = e-125 Identities = 99/256 (38%), Positives = 153/256 (59%), Gaps = 8/256 (3%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEES--EEVTREQVLR-RSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 E P + E T PT S EE + E+ R RS + + +L L E EP Sbjct: 781 EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMD 840 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RR 4597 F EA++ + W AMD+E++S++KNDTW LT LP G +A+ KWV++ K G+ R Sbjct: 841 FQEAIEKKT---WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY EIF+PV +L ++R+++ + A + QMD K+ FL+GDL+ Sbjct: 898 YKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP+G++V G+E V +L + LYGLKQAPR W + D + + +F K + Y Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017 Query: 4248 FKKYTNSYVFLLLYLDDMLIEGSS 4177 K + LY+DD++ G++ Sbjct: 1018 IKIQKEDILIACLYVDDLIFTGNN 1041 Score = 108 bits (267), Expect = 1e-020 Identities = 65/236 (27%), Positives = 111/236 (46%), Gaps = 5/236 (2%) Frame = -2 Query: 88590 FQEEVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG--- 88420 ++++ +E +WY+DS S HM G K++F L+E Sbjct: 324 YKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRL 383 Query: 88419 -RSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKH 88243 D I VYY+ + N+LS+ QL +K + + + + + + + + Sbjct: 384 KNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNR 443 Query: 88242 IYTVDTSTIYDKKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKED 88066 ++ ++ I + CL + K+ LWH R H + L L K++V GLP + Sbjct: 444 MFVLN---IRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHP-N 499 Query: 88065 KVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRN 87886 +VCE C LG K SF + + LELIH D+CGP++ +S G+ Y + +DD++R Sbjct: 500 QVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559 Query: 87885 T 87883 T Sbjct: 560 T 560 Score = 108 bits (266), Expect = 2e-020 Identities = 64/196 (32%), Positives = 105/196 (52%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y W RM+ + A D +W + KG + P ++EG+ D ++ + + K Sbjct: 18 YDNWSLRMKAILGAHD--VWEIVEKGFIEP---ENEGSLSQTQKDGLRDSRKR----DKK 68 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A C++ GL D F ++ TSAK+ W+ L+ S++G QV+K ++ +L E+EA +MK G Sbjct: 69 ALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEG 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 + + D +R TV N L G+ ++KVLR +E VT I E KDL MT++ Sbjct: 129 ELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIE 188 Query: 89788 ELVRNLKTYEMNVDKR 89741 +L+ +L+ YE K+ Sbjct: 189 QLLGSLQAYEEKKKKK 204 Score = 88.9 bits (217), Expect(3) = 7e-028 Identities = 48/146 (32%), Positives = 81/146 (54%), Gaps = 2/146 (1%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG ERK++ +LE+AR++L +LP W E + YL+NR + K + Sbjct: 626 QQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVS 65348 + P S+L+VFG + + K +K + ++ +IF+GY N+ GYK+ + TKK +S Sbjct: 686 GRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIIS 745 Query: 65349 RDVSF-YENVFPFTLFEVDFSFSTTLEK 65429 R++ F E + + E D++F E+ Sbjct: 746 RNIVFDEEGEWDWNSNEEDYNFFPHFEE 773 Score = 79.2 bits (192), Expect = 8e-012 Identities = 42/114 (36%), Positives = 64/114 (55%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G +I Q+ Y KE+LK+FKMDD+ ++GSL YLT Sbjct: 1078 GIFITQEGYAKEVLKKFKMDDSNP--------------------------SLVGSLRYLT 1111 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 +RPDI+++VG+ +R+ +P +H +A KRIL Y+KGT + G+ Y S++ LV Sbjct: 1112 CTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1165 Score = 78.8 bits (191), Expect = 1e-011 Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%) Frame = -2 Query: 87381 LCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNTSAINIVKNLVQHKRTKHVDIRHHFLRDNV 87205 L +W++ L + L E+ IF DN SAI + KN V H R+KH+D R+H++R+ V Sbjct: 1164 LVVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1223 Query: 87204 EKGQISMNFCTMEEQIADIFTMSLAREHFERNRLELGMMK 87085 K + + + +Q+ADIFT L RE F + R LG+ K Sbjct: 1224 SKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAK 1263 Score = 58.6 bits (139), Expect(3) = 7e-028 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C CL Q + FP ++++ + + +L+ D+ P + YFL+ +DDFSR T Sbjct: 502 CEGCLLGNQFK-MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKT 560 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 W L KS + K F + V + + IK++R+ +G EF S E Sbjct: 561 WVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKE 605 Score = 40.2 bits (92), Expect(4) = e-125 Identities = 31/85 (36%), Positives = 46/85 (53%), Gaps = 10/85 (11%) Frame = -2 Query: 6489 DERTNQHG*SKSKN*GK--PPNR---SNVTCLNCGEK*HFWTSYTKPKKKQNQKFGDDND 6325 ++ TNQ G + S+ GK P +R S+V C NCG+ H+ + P N+KF + + Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP---SNKKFKEKAN 307 Query: 6324 SVNSTEDIGDALILSVNSPVE-----SWILDSGAS 6235 V D L+++ E W LDSGAS Sbjct: 308 YVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGAS 342 Score = 34.8 bits (78), Expect(4) = e-125 Identities = 15/52 (28%), Positives = 34/52 (64%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKP 3993 ++ FEM D+G LG+++ ++ + + ++QE Y ++VL +F+++D+ P Sbjct: 1052 MTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKMDDSNP 1101 Score = 26.2 bits (56), Expect(3) = 7e-028 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 64472 LNFYNPLMSCMSHGNSTD-YLWHNRLGHVSF 64561 LN N + C+ + +LWH R GH++F Sbjct: 447 LNIRNDIAQCLKMCYKEESWLWHLRFGHLNF 477 >dbj|BAA89559.1| (AP001072) Similar to polyprotein. (AF061282) [Oryza sativa] Length = 1021 Score = 298 bits (755), Expect(2) = e-123 Identities = 165/337 (48%), Positives = 209/337 (61%) Frame = +2 Query: 56237 DDTSKVPSIESVSIVREFLDVFSADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVT 56416 + TSK +E + IVRE+ +VF DL ++ R F T Sbjct: 479 EKTSK--KLEDIPIVREYPEVFPDDLT--TMPPKRDIE-------------FWIDLALGT 521 Query: 56417 RPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQ 56596 PI PYRM EL E+K Q+ E L KG+IRPS +PWGA V+FV+KKD++ RMC++YR Sbjct: 522 APIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRA 581 Query: 56597 LNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYE 56776 LN+VT+KNKY +P IDD FD ++GA +FSKIDL SGY QL+I ++PKTAF G +E Sbjct: 582 LNEVTIKNKYPLPRIDDLFDQLKGATMFSKIDLRSGYHQLRIREEDIPKTAFIIHYGLFE 641 Query: 56777 FLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXX 56956 V SFGL NAPA FM LMN +F +L+ FV+VFIDDILIYSKS++ Sbjct: 642 CTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVMVFIDDILIYSKSKEEHEQHLRLVLEKLK 701 Query: 56957 XKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLAS 57136 LYAKF KC+F L V FLGH+V+ GV VD + +E+V W P V+ V SF+GLA Sbjct: 702 EHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAG 761 Query: 57137 YYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRFI FS IA +T L K+ FIWS EC SF+ Sbjct: 762 YYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFE 798 Score = 272 bits (687), Expect(2) = 2e-074 Identities = 134/265 (50%), Positives = 181/265 (67%), Gaps = 3/265 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE +LR+VL+ L++ +LYAKFSKC+FWLK V F GH+V+ +G+ VDP +E+ Sbjct: 681 IYSKSKEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVES 740 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W P +VT+V SF+GL YYRRF+E FS A T L ++ F+W +C+ SF +L Sbjct: 741 VTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEEL 800 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K + SAP+L L + F +YCDAS G+ V+M+ G + Y SR+L+ HE NYPT DL Sbjct: 801 KRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVVMQDGKVVAYASRQLRPHEGNYPTHDL 860 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 +LA +V AL IWRHYL G + E YTDH SL+ I Q DLN R RW+EL+KDYD+ I Y+ Sbjct: 861 KLAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQADLNLRQRRWLELIKDYDMGIHYY 920 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGE 38549 PGK N+VA +LSRK V + +C E Sbjct: 921 PGKANVVADALSRKSYCNVAWVEELCCE 948 Score = 182 bits (457), Expect = 7e-043 Identities = 105/209 (50%), Positives = 135/209 (64%), Gaps = 6/209 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +V+ + + VDP +E++ W P +V Q+ SFLGLAGYYRR S I+ P Sbjct: 725 IVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKE 784 Query: 68537 XXXX*LS-CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + C + L + L+L P Q ++ +Y DAS+ GLGCV+MQ GKV Sbjct: 785 EKFIWSAECNRSFEELKRRLVSAPVLIL---PDQTKD-FQVYCDASRQGLGCVVMQDGKV 840 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDL+L VV ALKIW +YL G V+T+H+SL+YIF Q DL Sbjct: 841 VAYASRQLRPHEGNYPTHDLKLAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQADLN 900 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKA 68998 LR+R WLEL+KDYDM I Y+PGK NVVADALS K+ Sbjct: 901 LRQRRWLELIKDYDMGIHYYPGKANVVADALSRKS 935 Score = 172 bits (431), Expect(2) = e-123 Identities = 82/117 (70%), Positives = 95/117 (81%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F VYCD S GLG V+M + V+ YASRQL+ HE NYPTHDL LAAVV ALK WRHYL Sbjct: 818 DFQVYCDASRQGLGCVVMQDGKVVAYASRQLRPHEGNYPTHDLKLAAVVHALKIWRHYLI 877 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 G +CEVYTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ I Y+ GKANVVADALSRK Sbjct: 878 GNRCEVYTDHKSLKYIFTQADLNLRQRRWLELIKDYDMGIHYYPGKANVVADALSRK 934 Score = 145 bits (363), Expect(2) = 2e-066 Identities = 71/137 (51%), Positives = 99/137 (71%), Gaps = 2/137 (1%) Frame = +2 Query: 67652 GDTSVE--TNMLESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITP 67825 G+ +VE + LE I +V E+ EVFP DL +PP DI+F+ID+ LGT PI PYR+ Sbjct: 474 GEVAVEKTSKKLEDIPIVREYPEVFPDDLTTMPPKRDIEFWIDLALGTAPIHKRPYRMGA 533 Query: 67826 AELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPI 68005 EL E+K Q+ + L K +IR S S WGAP++FV++KD+ MC+DYR LN++TI N YP+ Sbjct: 534 NELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPL 593 Query: 68006 PRIDDLFD*LQGASVSPRL 68062 PRIDDLFD L+GA++ ++ Sbjct: 594 PRIDDLFDQLKGATMFSKI 612 Score = 137 bits (341), Expect(2) = 2e-066 Identities = 93/208 (44%), Positives = 114/208 (54%), Gaps = 10/208 (4%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDLRS YHQL++REEDI KTAF YG +E VM F LTNA A FM+LMN F Sbjct: 605 GATMFSKIDLRSGYHQLRIREEDIPKTAFIIHYGLFECTVMSFGLTNAPAFFMNLMNKVF 664 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRRYH 68394 ++ KEEHE HLR V LKE +LY KFSKC+ WL VQ H Sbjct: 665 MEFLDKFVMVFIDDILIYSKSKEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGH 724 Query: 68395 ----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KE 68547 G D N + +R L+ Y +F IA +T+L KE Sbjct: 725 IVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKE 784 Query: 68548 VTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 F+WS EC SF++LK L +A +L LP + + F VY Sbjct: 785 EKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVY 822 Score = 59.7 bits (142), Expect = 6e-006 Identities = 26/44 (59%), Positives = 31/44 (70%) Frame = +3 Query: 58011 TKMYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTL 58142 TKMY DLK+ F W M+ +I +FVA C CQ+VK EHQRP G L Sbjct: 978 TKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLL 1021 Score = 54.7 bits (129), Expect = 2e-004 Identities = 38/125 (30%), Positives = 58/125 (46%) Frame = +1 Query: 54610 CYAFPRRSKVETSDAVITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPI 54789 C + +++ +I TF V +LFD G T S+ S FA L L +P+ Sbjct: 324 CVNHASAEEAQSAPEIILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPM 383 Query: 54790 HVSTHVGESVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNA 54969 V T G + S V G +LI+L+ D DVILGM WL+ + ++ C + Sbjct: 384 RVHTP-GGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIHCVS 442 Query: 54970 KTVTL 54984 +T+ L Sbjct: 443 RTIKL 447 Score = 48.8 bits (114), Expect = 0.012 Identities = 26/93 (27%), Positives = 44/93 (46%) Frame = -3 Query: 40643 EQLQSLGLLDSRGADFTAHQFRGPARQWWRTY*ESRPFGSPPISWSQFSKAFLSRFMPRS 40464 ++L L D F HQ GPA W Y +RP G+ ++WS+F ++F +P Sbjct: 80 KKLNLLQCNDQENVAFATHQLEGPASVWRDNYMVTRPAGT-EVTWSEFCQSFNKAQVPEG 138 Query: 40463 VRYRLCDHFSRLEHGSMTISEYEARFHEFSRHA 40365 + + F + G+ + EY F+ +R+A Sbjct: 139 IVAQKKREFRSPQQGTRAVIEYLHEFNRLARYA 171 Score = 46.5 bits (108), Expect = 0.059 Identities = 35/110 (31%), Positives = 48/110 (42%) Frame = +3 Query: 55758 EVETCDVVITCTLLVCDCMTFVLFDPRYTFSYVSSSFATGLDLYCDFLDIPIRVSTTVGE 55937 E ++ +I T V +LFD T S++S FA L L IP+RV T G Sbjct: 332 EAQSAPEIILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP-GG 390 Query: 55938 SVIVVKVYRSCLVTFVGSNTYVDFIILEMVVFDVIQGMTWLSPNFAIIDC 56087 + S V G + I+LE DVI GM WL+ + +I C Sbjct: 391 GMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIHC 440 Score = 45.7 bits (106), Expect = 0.10 Identities = 20/41 (48%), Positives = 28/41 (67%) Frame = -1 Query: 38230 KMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGG 38108 KMY+DL++ + W MR +IA+FV+ C Q+VK EH R G Sbjct: 979 KMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAG 1019 Score = 45.7 bits (106), Expect = 0.10 Identities = 19/41 (46%), Positives = 29/41 (70%) Frame = +2 Query: 69356 IYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGV 69478 +Y DLK+ + M+R+I +FV+ C CQ+VK EHQ+P G+ Sbjct: 980 MYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGL 1020 Score = 41.0 bits (94), Expect = 2.6 Identities = 24/67 (35%), Positives = 36/67 (52%) Frame = +1 Query: 66367 TIMDFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEADR 66546 T +F Q F VP + K+ EF QQG +V E+ +F+ LAR+A T+A+R Sbjct: 122 TWSEFCQSFNKAQVPEGIVAQKKREFRSPQQGTRAVIEYLHEFNRLARYAPEDVRTDAER 181 Query: 66547 LIRFVKG 66567 +F+ G Sbjct: 182 QEKFLSG 188 Score = 37.5 bits (85), Expect(2) = 2e-074 Identities = 16/35 (45%), Positives = 25/35 (70%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F++LM ++F LD FV++F+DDIL+ Sbjct: 647 FGLTNAPAFFMNLMNKVFMEFLDKFVMVFIDDILI 681 >dbj|BAA90794.1| (AP001168) Similar to 22 kDa kafirin cluster; Ty3-Gypsy type (AF061282) [Oryza sativa] Length = 607 Score = 372 bits (946), Expect(2) = e-122 Identities = 210/495 (42%), Positives = 291/495 (58%) Frame = -1 Query: 38995 LKELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRD 38816 +K+ +T+AP+LTL F I+ DAS G+ VLM++ + Y SR+L+ HE+NYPT D Sbjct: 1 MKKRLTTAPVLTLPDIRKDFEIFYDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHD 60 Query: 38815 LELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILY 38636 LELA +V AL IWRHYL G + E YTDH SL+ I Q +LN R RW+EL+KDYDL I Y Sbjct: 61 LELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHY 120 Query: 38635 HPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV 38456 HPGK N+VA +LS K AY + Sbjct: 121 HPGKANVVADALSHK----------------------------------------AYCNI 140 Query: 38455 QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLIL 38276 D++R + L LR V+ D DQ G + RI VP + LIL Sbjct: 141 AQIRPDQDRLCR----ELEKLRLTVVQSD-DQ------GTVWCGPRICVPAKKELRDLIL 189 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 EAHE YSIH G+ KMY+D++ ++ W+GM+ D+A++V+ C Q+VK EH R G + Sbjct: 190 KEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQP 249 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I EWKW+ I MDF+ LP+T G DSI+VIVD+LTKSAHF+PV++ F +LA +Y+ Sbjct: 250 LPIPEWKWEEIGMDFITDLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTFDGKKLAELYMT 309 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 VV G P I+SDRG+QFTS F + LGT ++ S A+HP TD Q+E Q+LEDM Sbjct: 310 HVVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPHTDGQTERVNQILEDM 369 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRG 37556 L C L+F G D+ P A+F+YN+ + ++I+M A++GR CR+ + W E + G Sbjct: 370 LRACALDFEGTWDRCLPYAEFSYNNSYQASIKMSPNEAMFGRKCRTPLCWNEVGEALVFG 429 Query: 37555 TDLIQGALEQVRVFK 37511 D+++ A EQV++ + Sbjct: 430 PDILKSAEEQVKLIR 444 Score = 196 bits (492), Expect = 6e-047 Identities = 102/241 (42%), Positives = 150/241 (61%), Gaps = 6/241 (2%) Frame = +1 Query: 69250 ED*GSYMCS------SDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHS 69411 +D G+ C + ++L L ++E + +YSIHP +TK ++A + ++ + Sbjct: 165 DDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVA 224 Query: 69412 RFCISMFELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNR 69591 + +A + IPEWK E I +D + +L RT +D IWVIV+R Sbjct: 225 EYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITDLPRTPSGYDSIWVIVDR 284 Query: 69592 LTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTR 69771 LTKSAHFVPV+TT++ KKLA++Y+ +V G I+SDRGT+F S FW +H+ LGT Sbjct: 285 LTKSAHFVPVKTTFDGKKLAELYMTHVVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTD 344 Query: 69772 VDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAP 69951 ++ ST +HP TD Q+E + Q+LEDML AC +DF WD+ LP EF+YNNSY S +M+P Sbjct: 345 LNFSTAYHPHTDGQTERVNQILEDMLRACALDFEGTWDRCLPYAEFSYNNSYQASIKMSP 404 Query: 69952 FEALYGR 69972 EA++GR Sbjct: 405 NEAMFGR 411 Score = 180 bits (452), Expect(2) = 5e-043 Identities = 108/280 (38%), Positives = 154/280 (54%) Frame = +2 Query: 68654 LYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVH 68833 ++ DAS+ GLGCVLMQ+ KVVAYASRQL+ HE Y HDLEL VV ALKIW +YL G Sbjct: 22 IFYDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNR 81 Query: 68834 FAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGS 69013 V+T+H+SL+YIF Q +L +R+R WLEL+KDYD+ I YHPGK NVVADALS KA + Sbjct: 82 CEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSHKAYC--N 139 Query: 69014 LAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIR 69193 +A ++ + L ++++ L + V+ + G W R+ P ++R Sbjct: 140 IAQIRPDQDRLCRELEKLRLT-VVQSDDQGTVWCGPRICVPAKK-------------ELR 185 Query: 69194 DKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLK 69373 D +LK ++A G + +Y D+K Sbjct: 186 DLILKEAHESAYSIHPGSTK----------------------------------MYQDIK 211 Query: 69374 QHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 ++ MKRD+ ++V+ C CQ+VK EHQ+P G+ +P Sbjct: 212 AYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLP 251 Score = 172 bits (432), Expect = 6e-040 Identities = 86/143 (60%), Positives = 108/143 (75%) Frame = +1 Query: 57298 R*NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHY 57477 R +F ++ D S GLG VLM ER V+ YASRQL+ HE NYPTHDL+LAAVV ALK WRHY Sbjct: 17 RKDFEIFYDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHY 76 Query: 57478 LYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKV 57657 L G +CEVYTDH+SL Y+FTQ +LN+R+RRW+EL+KD D+ I YH GKANVVADALS K Sbjct: 77 LIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSHK- 135 Query: 57658 GSMGSLAHSQVSRRPLAREVQTL 57726 + ++A + + L RE++ L Sbjct: 136 -AYCNIAQIRPDQDRLCRELEKL 157 Score = 102 bits (252), Expect = 8e-019 Identities = 45/90 (50%), Positives = 61/90 (67%) Frame = +3 Query: 57894 DEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIV 58073 D++G + R+CVP +L IL EAH S YSIHPG+TKMY D+K +F W+ M+ D+ Sbjct: 165 DDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVA 224 Query: 58074 DFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++VA C CQ+VK EHQRP G L+ +P E Sbjct: 225 EYVALCDICQRVKAEHQRPAGLLQPLPIPE 254 Score = 96.0 bits (235), Expect(2) = e-122 Identities = 56/164 (34%), Positives = 84/164 (51%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEI 37338 I++RL+ QSR ++YAD RR L F D ++L VSP++G+ RFG KL+PRYIGP+ I Sbjct: 443 IRERLKTAQSRQKNYADNRRRDLEFEKGDHVYLRVSPLRGMRRFGMSSKLAPRYIGPYLI 502 Query: 37337 LRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVI 37158 GEVAY+L+LP + +H VF VS + + + +EL+ LT+ E + + Sbjct: 503 TARRGEVAYQLELPEGLADVHNVFHVSQLKKCLRVPEEQVPLGNIELERNLTYKERPIKV 562 Query: 37157 LARY*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACL 37026 L R+ + S W ++ FP L Sbjct: 563 LEETERQTRRKTIKFYKVQWSNHSEDEATWEREDLLRAEFPELL 606 Score = 23.9 bits (50), Expect(2) = 5e-043 Identities = 11/23 (47%), Positives = 16/23 (68%) Frame = +1 Query: 68593 LKT*LTTARILTLPVEREGFVVY 68661 +K LTTA +LTLP R+ F ++ Sbjct: 1 MKKRLTTAPVLTLPDIRKDFEIF 23 >gb|AAF18642.1|AC006228_13 (AC006228) F5J5.15 [Arabidopsis thaliana] Length = 1617 Score = 403 bits (1024), Expect(3) = e-121 Identities = 244/613 (39%), Positives = 336/613 (54%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V++ LR+Q+L+AK KC FW + + F GH+VS EG+ VDP +IEA Sbjct: 724 VYFKSPEEHEVHLRRVMEKLREQKLFAKLGKCSFWQREMDFLGHIVSAEGVLVDPEQIEA 783 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKLKEL 38984 I W +PT+ TE+ SF+GL YYRRF EG + SF + F + + Sbjct: 784 IRDWPKPTNATEIRSFLGLAGYYRRF-EGVCE-------EGYSFCVVTGVRGGFRESEGD 835 Query: 38983 ITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELA 38804 + +++ + +Y DAS VG+ VLM++G I Y SR+L+ HE NYPT DLE+A Sbjct: 836 VDEYTSVSI-ARAEPYMVYTDASRVGLGCVLMQRGKVIVYASRQLRKHEGNYPTHDLEMA 894 Query: 38803 VIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGK 38624 I+FAL IW YLYG + + +TDH SL+DI Q +LN R RW+EL+ DYDL I YHPGK Sbjct: 895 AIIFALKIWGSYLYGGKVQVFTDHKSLKDIFTQPELNLRQRRWMELVADYDLEIAYHPGK 954 Query: 38623 KNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSL 38444 N+VA +LSRK+ G+ AL + A +RL CV+A ++ Sbjct: 955 TNVVADALSRKR------VGAAPGQSVEALVSEIGA---LRL------CVVAREPLKLEA 999 Query: 38443 YDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAH 38264 DR +G + R+ +P + + ILSEAH Sbjct: 1000 VDRAA----------------------------NGTILVHERVCLPKDEELRREILSEAH 1031 Query: 38263 EFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSIS 38084 +SIH G KMYRDL++HY W GM+ D+A++V+ C Q VK EH GG + L IS Sbjct: 1032 ASMFSIHPGATKMYRDLKRHYQWVGMKRDVANWVTECDVCQLVKAEHQVPGGLLQSLPIS 1091 Query: 38083 EWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVR 37904 EWK T A LP + Y+ E+V+ Sbjct: 1092 EWK----------------------------KTDGAAVLPKK-----------YVSEIVK 1112 Query: 37903 FHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVC 37724 HGVPVSI+S R S+FTS F FQ E+GT+V +S A+HPQTD QSE TIQ LEDML +C Sbjct: 1113 LHGVPVSILSHRDSKFTSAFWRAFQVEMGTKVQMSTAYHPQTDGQSERTIQTLEDMLQMC 1172 Query: 37723 VLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLI 37544 VL++GG L +FAYN+ + ++I M F ALYGR CR+L+ W + + G D + Sbjct: 1173 VLDWGGHWADHLSLVKFAYNNSYQASIGMAPFEALYGRPCRTLLCWTQVGEKSIYGADYV 1232 Query: 37543 QGALEQVRVFKID 37505 Q E++RV K++ Sbjct: 1233 QETTERIRVLKLN 1245 Score = 298 bits (756), Expect = 6e-078 Identities = 219/605 (36%), Positives = 311/605 (51%), Gaps = 16/605 (2%) Frame = +2 Query: 67679 LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQ 67858 + I VV EF +VF + L +PP F I+++LGT P+ PYR+ PAE+ E+K QL+ Sbjct: 547 VSDIWVVQEFEDVFQS-LQGLPPSRSDPFTIELELGTAPLSKTPYRMVPAEIAELKKQLE 605 Query: 67859 DLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQ 68038 DLL K FIR S S WGAP LN++T+ N YP+PRID+L D L+ Sbjct: 606 DLLGKGFIRPSTSRWGAP------------------GLNRVTLKNKYPLPRIDELLDQLR 647 Query: 68039 GASVSPRLT*DRAI----IS*SLGRRISLRQLFKHV-MAITSF**CILN*LTPMQLLWT* 68203 GA+ ++ I+ + R+ + R + H + F + N T + L Sbjct: 648 GATCFSKIDLTPGYHQFPIAEADVRKTAFRTRYGHFEFVVMPF--GLTNAPTALMRLMNS 705 Query: 68204 *IERSDNIWIPLLLYSLMIY*YN---HAV--RRNMSII*GPCLGF*RRK-SFTRSFQSVR 68365 + + ++ + + +++Y + H V RR M + L K SF + Sbjct: 706 VFQEFLDEFVIIFIDDILVYFKSPEEHEVHLRRVMEKLREQKLFAKLGKCSFWQREMDFL 765 Query: 68366 FGLVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXX 68545 +VS E ++VDP++IE I+DW +P + +I SFLGLAGYYRR Sbjct: 766 GHIVSAEGVLVDPEQIEAIRDWPKPTNATEIRSFLGLAGYYRRFEGVCEEGYSF------ 819 Query: 68546 X*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAYA 68725 C +T VR F+ S + E ++Y DAS++GLGCVLMQ+GKV+ YA Sbjct: 820 ----CVVTGVRGGFRESEGDVDEYTSVSIARAEPYMVYTDASRVGLGCVLMQRGKVIVYA 875 Query: 68726 SRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKR 68905 SRQL+ HE Y HDLE+ ++FALKIW +YLYG VFT+H+SL+ IF Q +L LR+R Sbjct: 876 SRQLRKHEGNYPTHDLEMAAIIFALKIWGSYLYGGKVQVFTDHKSLKDIFTQPELNLRQR 935 Query: 68906 IWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSNSFVL 69085 W+EL+ DYD+ I YHPGKTNVVADALS K V S Sbjct: 936 RWMELVADYDLEIAYHPGKTNVVADALSRKRVGAAP------------------GQSVEA 977 Query: 69086 YISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGH 69265 +SE G LC + + LK EA + G + + Sbjct: 978 LVSEIGAL----------------------RLCVVAREPLKLEAVDRA--ANGTILVHER 1013 Query: 69266 ICVPRTGI*LD*TWRRSIV---*VTLFI--QGLLNIYLDLKQHYLCCRMKRDIVDFVSRC 69430 +C+P+ D RR I+ ++F G +Y DLK+HY MKRD+ ++V+ C Sbjct: 1014 VCLPK-----DEELRREILSEAHASMFSIHPGATKMYRDLKRHYQWVGMKRDVANWVTEC 1068 Query: 69431 LNCQQVKHEHQKPGGVTLRIP 69493 CQ VK EHQ PGG+ +P Sbjct: 1069 DVCQLVKAEHQVPGGLLQSLP 1089 Score = 241 bits (608), Expect = 1e-060 Identities = 125/246 (50%), Positives = 158/246 (63%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T P+S PYRM PAE+ ELK QL++LLGKGFIRPS + WGA Sbjct: 582 TAPLSKTPYRMVPAEIAELKKQLEDLLGKGFIRPSTSRWGA------------------P 623 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VTLKNKY +P ID+ D ++GA FSKIDLT GY Q I +V KTAF TR GH+ Sbjct: 624 GLNRVTLKNKYPLPRIDELLDQLRGATCFSKIDLTPGYHQFPIAEADVRKTAFRTRYGHF 683 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF+V FGL NAP A M LMN +F+ +L+ FVI+FIDDIL+Y KS + Sbjct: 684 EFVVMPFGLTNAPTALMRLMNSVFQEFLDEFVIIFIDDILVYFKSPEEHEVHLRRVMEKL 743 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 + L+AK KC F + FLGH+VS +GV+VD +IEA++ W KPTN +++ SF+GLA Sbjct: 744 REQKLFAKLGKCSFWQREMDFLGHIVSAEGVLVDPEQIEAIRDWPKPTNATEIRSFLGLA 803 Query: 57134 SYYRRF 57151 YYRRF Sbjct: 804 GYYRRF 809 Score = 160 bits (401), Expect = 3e-036 Identities = 83/136 (61%), Positives = 101/136 (74%), Gaps = 13/136 (9%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL+ HE NYPTHDL++AA++FALK W YLYG Sbjct: 850 YMVYTDASRVGLGCVLMQRGKVIVYASRQLRKHEGNYPTHDLEMAAIIFALKIWGSYLYG 909 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 K +V+TDH+SL +FTQ +LNLR+RRWMEL+ D D+ I YH GK NVVADALSRK Sbjct: 910 GKVQVFTDHKSLKDIFTQPELNLRQRRWMELVADYDLEIAYHPGKTNVVADALSRKRVGA 969 Query: 57655 ---------VGSMGSLAHSQVSRRPLARE 57714 V +G+L V+R PL E Sbjct: 970 APGQSVEALVSEIGALRLCVVAREPLKLE 998 Score = 143 bits (358), Expect = 3e-031 Identities = 91/231 (39%), Positives = 116/231 (49%) Frame = +1 Query: 69280 DRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFELSASEA*T 69459 D +L R + E ++ +SIHP ATK L K H + Sbjct: 1019 DEELRREILSEAHASMFSIHPGATKMYRDL----------KRHYQ--------------- 1053 Query: 69460 PKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN* 69639 W D + W +EC +V + G L +S + T Sbjct: 1054 ---WVGMKRD-VANWVTECDVCQLVKAEHQVPGG----------LLQSLPISEWKKTDGA 1099 Query: 69640 KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSE 69819 L K Y+ EIV+LHGV +SI+S R +KF S FW + E+GT+V +ST +HPQTD QSE Sbjct: 1100 AVLPKKYVSEIVKLHGVPVSILSHRDSKFTSAFWRAFQVEMGTKVQMSTAYHPQTDGQSE 1159 Query: 69820 WIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 IQ LEDML CV+D+G HW L LV+FAYNNSY S MAPFEALYGR Sbjct: 1160 RTIQTLEDMLQMCVLDWGGHWADHLSLVKFAYNNSYQASIGMAPFEALYGR 1210 Score = 106 bits (261), Expect = 7e-020 Identities = 45/87 (51%), Positives = 64/87 (72%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ ERVC+P+ ++L IL+EAH+S +SIHPGATKMY DLK+H+ W M+ D+ ++V Sbjct: 1006 GTILVHERVCLPKDEELRREILSEAHASMFSIHPGATKMYRDLKRHYQWVGMKRDVANWV 1065 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 +C CQ VK EHQ PGG L+ +P E Sbjct: 1066 TECDVCQLVKAEHQVPGGLLQSLPISE 1092 Score = 100 bits (247), Expect = 3e-018 Identities = 51/111 (45%), Positives = 62/111 (54%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL YHQ + E D+ KTAF+TRYGH+EF+VM F LTNA M LMN F Sbjct: 648 GATCFSKIDLTPGYHQFPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPTALMRLMNSVF 707 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW 68370 +++ EEHE HLR V L+E+KL+ K KC W Sbjct: 708 QEFLDEFVIIFIDDILVYFKSPEEHEVHLRRVMEKLREQKLFAKLGKCSFW 758 Score = 47.3 bits (110), Expect(3) = e-121 Identities = 43/156 (27%), Positives = 60/156 (37%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R +SYAD RR L F V G RW P+ Sbjct: 1246 MKEAQDRQRSYADKRRRELEFEV------------GTECISRW---------PY--CERV 1282 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+LP A H VF VSM R + + VL +L +T V +L R Sbjct: 1283 GPVAYRLELPDVMRAFHNVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPVRVLERR 1342 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 + R+ +++ + W P R K+ F Sbjct: 1343 IKEVRRKKIPMIKVLWDCDGVTEETWEPEARIKARF 1378 Score = 37.9 bits (86), Expect(3) = e-121 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+A + LM +F+ LD FVIIF+DDILV Sbjct: 690 FGLTNAPTALMRLMNSVFQEFLDEFVIIFIDDILV 724 >emb|CAB46045.1| (Z97342) retrotransposon like protein [Arabidopsis thaliana] Length = 687 Score = 385 bits (978), Expect(2) = e-121 Identities = 224/518 (43%), Positives = 316/518 (60%), Gaps = 9/518 (1%) Frame = -1 Query: 39061 THLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQ 38882 T L +D +F W +C+ SFL+LK ++T+AP+L L EG +T+Y DAS VG+ VL+++ Sbjct: 6 TQLTGKDTAFNWSEECERSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVGLGCVLIQK 65 Query: 38881 GWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQR 38702 G I Y SR+L+ HE NYPT DLE+A +VFAL IWR YLYG + + +TDH SL+ I Q Sbjct: 66 GSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYLYGAKVQIFTDHKSLKYIFTQP 125 Query: 38701 DLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQF 38522 +LN R RWI+L+ DYDL+I YHPGK N V +LSR + V V ER + Sbjct: 126 ELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSRLRTV-------VEAERNQVNLV-- 176 Query: 38521 SANCMVRLDIFYSRCVLAYMGV----QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQAT 38354 N M L + + +G+ Q+ L R R Q RD+ + G Sbjct: 177 --NMMGTLHLNALSKEVEPLGLRAANQADLLSRIRSAQE--------RDEEIKGWAQNNK 226 Query: 38353 LDF----DGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGM 38186 ++ +G + +GR+ P + IL EAH+ ++SIH G+ KMYRDL+++Y W GM Sbjct: 227 TEYQSSNNGTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKRYYHWVGM 286 Query: 38185 R*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGV-DSI 38009 + D+A +V+ K EH G + L I EWKWD I MDFV GLP K +++ Sbjct: 287 KKDVARWVA--------KEEHQVPSGMLQNLPIPEWKWDHIMMDFVTGLPTGIKSKHNAV 338 Query: 38008 YVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQ 37829 +V+VD+LTKSAHF+ + + +A YI E+VR HG+PVSI+SDR ++FTS F FQ Sbjct: 339 WVVVDRLTKSAHFMAISDKDAAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKPFQ 398 Query: 37828 DELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHS 37649 LGTRV+LS A+HPQTD QSE TIQ LEDML CVL++GG +++ L +FAYN+ F + Sbjct: 399 KVLGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQA 458 Query: 37648 NIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 +I M + ALYGR R+ + W + R G ++ ++++ KI Sbjct: 459 SIGMSPYEALYGRAGRTPLCWTPVGERRLFGPAVVDETTKKMKFLKI 505 Score = 191 bits (481), Expect = 1e-045 Identities = 111/261 (42%), Positives = 155/261 (58%), Gaps = 1/261 (0%) Frame = +1 Query: 69196 QGVKTRSQGCNS***GSFED*GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEA 69375 Q KT Q N+ G+ G +D+ L ++E + +SIHP + K L+ Sbjct: 223 QNNKTEYQSSNN---GTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKR 279 Query: 69376 ALFVLPYEKGHSRFCISMFELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTL 69555 + +K +R+ ++ E P + IPEWK + I +D V L + Sbjct: 280 YYHWVGMKKDVARW------VAKEEHQVPSGMLQNLP--IPEWKWDHIMMDFVTGLPTGI 331 Query: 69556 -GKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMS 69732 K + +WV+V+RLTKSAHF+ + + +A+ YI EIVRLHG+ +SI+SDR T+F S Sbjct: 332 KSKHNAVWVVVDRLTKSAHFMAISDKDAAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTS 391 Query: 69733 HFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFA 69912 FW K LGTRV+LST +HPQTD QSE IQ LEDML ACV+D+G +W+++L LVEFA Sbjct: 392 KFWKPFQKVLGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFA 451 Query: 69913 YNNSYHLSFEMAPFEALYGRGG 69978 YNNS+ S M+P+EALYGR G Sbjct: 452 YNNSFQASIGMSPYEALYGRAG 473 Score = 164 bits (411), Expect(2) = 2e-046 Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 13/284 (4%) Frame = +2 Query: 68642 ERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 E +Y DAS +GLGCVL+QKG V+AYASRQL+ HEK Y +DLE+ VVFALKIW +YL Sbjct: 45 EPYTVYTDASIVGLGCVLIQKGSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYL 104 Query: 68822 YGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS-LKA 68998 YG +FT+H+SL+YIF Q +L LR+R W++L+ DYD+ I YHPGK N V DALS L+ Sbjct: 105 YGAKVQIFTDHKSLKYIFTQPELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSRLRT 164 Query: 68999 V------------SMGSLAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYW 69142 V MG+L + +SK ++ + + +L Sbjct: 165 VVEAERNQVNLVNMMGTLHLNALSKEVEPLGLRAANQADLL------------------- 205 Query: 69143 SRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV 69322 SR S Q D ++ K + K E +++ + G + + G +C P + + + Sbjct: 206 SRIRSAQERDEEI-KGWAQNNKTEYQSS---NNGTIVVNGRVCGPNDKALKEEILKEAHQ 261 Query: 69323 *VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 G +Y DLK++Y MK+D+ +V+ K EHQ P G+ +P Sbjct: 262 SKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVA--------KEEHQVPSGMLQNLP 310 Score = 157 bits (394), Expect(3) = 2e-053 Identities = 86/180 (47%), Positives = 121/180 (66%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GLG VL+ + +VI YASRQL+ HE NYPT+DL++AAVVFALK WR YLYG Sbjct: 47 YTVYTDASIVGLGCVLIQKGSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYLYG 106 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K +++TDH+SL Y+FTQ +LNLR+RRW++L+ D D+ I YH GKAN V DALSR + Sbjct: 107 AKVQIFTDHKSLKYIFTQPELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSR----L 162 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 ++ ++ ++ L + TL + + EV E G A +A L +I+ Q DE+++ Sbjct: 163 RTVVEAERNQVNLVNMMGTLHLNALSKEV-EPLGLRAANQA--DLLSRIRSAQERDEEIK 219 Score = 81.1 bits (197), Expect(2) = e-121 Identities = 50/158 (31%), Positives = 77/158 (48%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KL PRY+GP++++ Sbjct: 506 KLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLRPRYVGPYKVIER 565 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILAR 37149 G VAY+LDLPP A H VF VS R + ++ + L + +T V I+ + Sbjct: 566 VGAVAYKLDLPPKLDAFHNVFHVSQLRKCLSEQEESMEDVPPGLKENMTVEAWPVRIMDQ 625 Query: 37148 Y*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFP 37035 + LL+ + + W + K++FP Sbjct: 626 MKKGTRGKSMDLLKILWNCGGREEYTWETETKMKANFP 663 Score = 73.7 bits (178), Expect(3) = 2e-053 Identities = 37/87 (42%), Positives = 51/87 (58%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVC P L IL EAH S++SIHPG+ KMY DLK+++ W M+ D+ +V Sbjct: 235 GTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWV 294 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A K EHQ P G L+ +P E Sbjct: 295 A--------KEEHQVPSGMLQNLPIPE 313 Score = 51.5 bits (121), Expect(2) = 2e-046 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +1 Query: 68512 IASTLTRLT*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 +A +T+LT K+ F WS+ECE SF +LK LT A +L LP E E + VY Sbjct: 1 MAQPMTQLTGKDTAFNWSEECERSFLELKAMLTNAPVLVLPEEGEPYTVY 50 Score = 28.6 bits (62), Expect(3) = 2e-053 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 57170 IALQLTNLTKQNVPFIWSGECEESF 57244 +A +T LT ++ F WS ECE SF Sbjct: 1 MAQPMTQLTGKDTAFNWSEECERSF 25 >emb|CAB80961.1| (AL161545) retrotransposon like protein [Arabidopsis thaliana] Length = 687 Score = 385 bits (978), Expect(2) = e-121 Identities = 224/518 (43%), Positives = 316/518 (60%), Gaps = 9/518 (1%) Frame = -1 Query: 39061 THLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQ 38882 T L +D +F W +C+ SFL+LK ++T+AP+L L EG +T+Y DAS VG+ VL+++ Sbjct: 6 TQLTGKDTAFNWSEECERSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVGLGCVLIQK 65 Query: 38881 GWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQR 38702 G I Y SR+L+ HE NYPT DLE+A +VFAL IWR YLYG + + +TDH SL+ I Q Sbjct: 66 GSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYLYGAKVQIFTDHKSLKYIFTQP 125 Query: 38701 DLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQF 38522 +LN R RWI+L+ DYDL+I YHPGK N V +LSR + V V ER + Sbjct: 126 ELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSRLRTV-------VEAERNQVNLV-- 176 Query: 38521 SANCMVRLDIFYSRCVLAYMGV----QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQAT 38354 N M L + + +G+ Q+ L R R Q RD+ + G Sbjct: 177 --NMMGTLHLNALSKEVEPLGLRAANQADLLSRIRSAQE--------RDEEIKGWAQNNK 226 Query: 38353 LDF----DGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGM 38186 ++ +G + +GR+ P + IL EAH+ ++SIH G+ KMYRDL+++Y W GM Sbjct: 227 TEYQSSNNGTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKRYYHWVGM 286 Query: 38185 R*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGV-DSI 38009 + D+A +V+ K EH G + L I EWKWD I MDFV GLP K +++ Sbjct: 287 KKDVARWVA--------KEEHQVPSGMLQNLPIPEWKWDHIMMDFVTGLPTGIKSKHNAV 338 Query: 38008 YVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQ 37829 +V+VD+LTKSAHF+ + + +A YI E+VR HG+PVSI+SDR ++FTS F FQ Sbjct: 339 WVVVDRLTKSAHFMAISDKDAAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKPFQ 398 Query: 37828 DELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHS 37649 LGTRV+LS A+HPQTD QSE TIQ LEDML CVL++GG +++ L +FAYN+ F + Sbjct: 399 KVLGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQA 458 Query: 37648 NIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 +I M + ALYGR R+ + W + R G ++ ++++ KI Sbjct: 459 SIGMSPYEALYGRAGRTPLCWTPVGERRLFGPAVVDETTKKMKFLKI 505 Score = 191 bits (481), Expect = 1e-045 Identities = 111/261 (42%), Positives = 155/261 (58%), Gaps = 1/261 (0%) Frame = +1 Query: 69196 QGVKTRSQGCNS***GSFED*GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEA 69375 Q KT Q N+ G+ G +D+ L ++E + +SIHP + K L+ Sbjct: 223 QNNKTEYQSSNN---GTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKR 279 Query: 69376 ALFVLPYEKGHSRFCISMFELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTL 69555 + +K +R+ ++ E P + IPEWK + I +D V L + Sbjct: 280 YYHWVGMKKDVARW------VAKEEHQVPSGMLQNLP--IPEWKWDHIMMDFVTGLPTGI 331 Query: 69556 -GKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMS 69732 K + +WV+V+RLTKSAHF+ + + +A+ YI EIVRLHG+ +SI+SDR T+F S Sbjct: 332 KSKHNAVWVVVDRLTKSAHFMAISDKDAAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTS 391 Query: 69733 HFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFA 69912 FW K LGTRV+LST +HPQTD QSE IQ LEDML ACV+D+G +W+++L LVEFA Sbjct: 392 KFWKPFQKVLGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFA 451 Query: 69913 YNNSYHLSFEMAPFEALYGRGG 69978 YNNS+ S M+P+EALYGR G Sbjct: 452 YNNSFQASIGMSPYEALYGRAG 473 Score = 164 bits (411), Expect(2) = 2e-046 Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 13/284 (4%) Frame = +2 Query: 68642 ERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 E +Y DAS +GLGCVL+QKG V+AYASRQL+ HEK Y +DLE+ VVFALKIW +YL Sbjct: 45 EPYTVYTDASIVGLGCVLIQKGSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYL 104 Query: 68822 YGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS-LKA 68998 YG +FT+H+SL+YIF Q +L LR+R W++L+ DYD+ I YHPGK N V DALS L+ Sbjct: 105 YGAKVQIFTDHKSLKYIFTQPELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSRLRT 164 Query: 68999 V------------SMGSLAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYW 69142 V MG+L + +SK ++ + + +L Sbjct: 165 VVEAERNQVNLVNMMGTLHLNALSKEVEPLGLRAANQADLL------------------- 205 Query: 69143 SRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV 69322 SR S Q D ++ K + K E +++ + G + + G +C P + + + Sbjct: 206 SRIRSAQERDEEI-KGWAQNNKTEYQSS---NNGTIVVNGRVCGPNDKALKEEILKEAHQ 261 Query: 69323 *VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 G +Y DLK++Y MK+D+ +V+ K EHQ P G+ +P Sbjct: 262 SKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVA--------KEEHQVPSGMLQNLP 310 Score = 157 bits (394), Expect(3) = 2e-053 Identities = 86/180 (47%), Positives = 121/180 (66%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GLG VL+ + +VI YASRQL+ HE NYPT+DL++AAVVFALK WR YLYG Sbjct: 47 YTVYTDASIVGLGCVLIQKGSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYLYG 106 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K +++TDH+SL Y+FTQ +LNLR+RRW++L+ D D+ I YH GKAN V DALSR + Sbjct: 107 AKVQIFTDHKSLKYIFTQPELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSR----L 162 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 ++ ++ ++ L + TL + + EV E G A +A L +I+ Q DE+++ Sbjct: 163 RTVVEAERNQVNLVNMMGTLHLNALSKEV-EPLGLRAANQA--DLLSRIRSAQERDEEIK 219 Score = 81.1 bits (197), Expect(2) = e-121 Identities = 50/158 (31%), Positives = 77/158 (48%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KL PRY+GP++++ Sbjct: 506 KLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLRPRYVGPYKVIER 565 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILAR 37149 G VAY+LDLPP A H VF VS R + ++ + L + +T V I+ + Sbjct: 566 VGAVAYKLDLPPKLDAFHNVFHVSQLRKCLSEQEESMEDVPPGLKENMTVEAWPVRIMDQ 625 Query: 37148 Y*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFP 37035 + LL+ + + W + K++FP Sbjct: 626 MKKGTRGKSMDLLKILWNCGGREEYTWETETKMKANFP 663 Score = 73.7 bits (178), Expect(3) = 2e-053 Identities = 37/87 (42%), Positives = 51/87 (58%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVC P L IL EAH S++SIHPG+ KMY DLK+++ W M+ D+ +V Sbjct: 235 GTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWV 294 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A K EHQ P G L+ +P E Sbjct: 295 A--------KEEHQVPSGMLQNLPIPE 313 Score = 51.5 bits (121), Expect(2) = 2e-046 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +1 Query: 68512 IASTLTRLT*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 +A +T+LT K+ F WS+ECE SF +LK LT A +L LP E E + VY Sbjct: 1 MAQPMTQLTGKDTAFNWSEECERSFLELKAMLTNAPVLVLPEEGEPYTVY 50 Score = 28.6 bits (62), Expect(3) = 2e-053 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 57170 IALQLTNLTKQNVPFIWSGECEESF 57244 +A +T LT ++ F WS ECE SF Sbjct: 1 MAQPMTQLTGKDTAFNWSEECERSF 25 >dbj|BAA18885.1| (D90852) ORF_ID:o251#1~similar to [SwissProt Accession Number P19777] [Escherichia coli] Length = 207 Score = 437 bits (1113), Expect = e-120 Identities = 206/207 (99%), Positives = 207/207 (99%) Frame = +1 Query: 20641 IMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCD 20820 +MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCD Sbjct: 1 MMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCD 60 Query: 20821 REALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARM 21000 REALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARM Sbjct: 61 REALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARM 120 Query: 21001 LGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHS 21180 LGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHS Sbjct: 121 LGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHS 180 Query: 21181 ALGYRSPREYLRQRACNGLSDNRCLEI 21261 ALGYRSPREYLRQRACNGLSDNRCLEI Sbjct: 181 ALGYRSPREYLRQRACNGLSDNRCLEI 207 >dbj|BAA15305.1| (D90800) ORF_ID:o309#9~similar to [SwissProt Accession Number P19777] [Escherichia coli] Length = 206 Score = 437 bits (1112), Expect = e-119 Identities = 206/206 (100%), Positives = 206/206 (100%) Frame = +1 Query: 20644 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR 20823 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR Sbjct: 1 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR 60 Query: 20824 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML 21003 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML Sbjct: 61 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML 120 Query: 21004 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA 21183 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA Sbjct: 121 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA 180 Query: 21184 LGYRSPREYLRQRACNGLSDNRCLEI 21261 LGYRSPREYLRQRACNGLSDNRCLEI Sbjct: 181 LGYRSPREYLRQRACNGLSDNRCLEI 206 >dbj|BAA15283.1| (D90799) ORF_ID:o309#9~similar to [SwissProt Accession Number P19777] [Escherichia coli] Length = 206 Score = 437 bits (1112), Expect = e-119 Identities = 206/206 (100%), Positives = 206/206 (100%) Frame = +1 Query: 20644 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR 20823 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR Sbjct: 1 MRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDR 60 Query: 20824 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML 21003 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML Sbjct: 61 EALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARML 120 Query: 21004 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA 21183 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA Sbjct: 121 GLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSA 180 Query: 21184 LGYRSPREYLRQRACNGLSDNRCLEI 21261 LGYRSPREYLRQRACNGLSDNRCLEI Sbjct: 181 LGYRSPREYLRQRACNGLSDNRCLEI 206 >gb|AAC69377.1| (AC005398) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1328 Score = 289 bits (732), Expect(2) = e-118 Identities = 150/277 (54%), Positives = 189/277 (68%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T P+S PYRMAPAE+ ELK QL++LLG A VLFVKKKD SFR+CI+YR Sbjct: 476 TAPLSKAPYRMAPAEMAELKKQLEDLLG------------APVLFVKKKDGSFRLCIDYR 523 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN VT+KNKY +P ID+ D ++GA FSKIDLTSGY + I +V KTAF TR GH+ Sbjct: 524 GLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHLIPIAEADVRKTAFRTRYGHF 583 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF+V FGL NAPAAFM LMN +F+ L+ FVI+FIDDIL+YSKS + Sbjct: 584 EFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDILVYSKSLEEHEVHLRRVMEKL 643 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 + L+AK KC F + FLGH+VS +GV VD KIEA++ W PTN +++ SF+GLA Sbjct: 644 REQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWHTPTNATEIRSFLGLA 703 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 YYRRF+ F+S+A +T LT ++VPF+WS ECEE F Sbjct: 704 GYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGF 740 Score = 282 bits (714), Expect(2) = 7e-079 Identities = 135/252 (53%), Positives = 181/252 (71%), Gaps = 3/252 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 624 VYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 683 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I WH PT+ TE+ SF+GL YYRRFV+GF++ A T L +DV F+W +C+ F+ L Sbjct: 684 IRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 743 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DASGVG+ VLM++G I Y SR+L+ HE NYPT DL Sbjct: 744 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDL 803 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + +TDH SL+ I Q +LN R +W+EL+ DYDL I YH Sbjct: 804 EMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYDLEIAYH 863 Query: 38632 PGKKNMVAYSLSRKQ 38588 PGK N+VA +LS K+ Sbjct: 864 PGKANVVADALSHKR 878 Score = 277 bits (700), Expect = 2e-071 Identities = 186/448 (41%), Positives = 261/448 (57%), Gaps = 30/448 (6%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFI 67882 EF +VF + L +PP F I+++ GT P+ PYR+ PAE+ E+K QL+DLL Sbjct: 449 EFEDVFQS-LQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLL----- 502 Query: 67883 RTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 GAP+LFVK+KD +CIDYR LN +T+ N YP+PRID+L D L+GA+ ++ Sbjct: 503 -------GAPVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKI 555 Query: 68063 T*DRAI----IS*SLGRRISLRQLFKHVMAITSF**CILN*LTPMQLLWT**IERSDNIW 68230 I+ + R+ + R + H + M+L+ + E D Sbjct: 556 DLTSGYHLIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFV 615 Query: 68231 I----PLLLYSLMIY*YNHAVRRNMSII*GPCLGF*RRK-SFTRSFQSVRFGLVSKEDIM 68395 I +L+YS + + +RR M + L K SF + +VS E + Sbjct: 616 IIFIDDILVYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVS 675 Query: 68396 VDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L------S 68557 VDP+KIE I+DW P + +I SFLGLAGYYRR + + + Sbjct: 676 VDPEKIEAIRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPE 735 Query: 68558 C--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAYASR 68731 C G S++ + S+ + L PY ++Y DAS +GLGCVLMQ+GKV+AYASR Sbjct: 736 CEEGFVSLKEMLTSTPVLALPEHGEPY------MVYTDASGVGLGCVLMQRGKVIAYASR 789 Query: 68732 QLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIW 68911 QL+ HE Y HDLE+ V+FALKIW +YLYG + VFT+H+SL+YIF Q +L LR+R W Sbjct: 790 QLRKHEGNYPTHDLEMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQW 849 Query: 68912 LELLKDYDMTILYHPGKTNVVADALSLKAV-------------SMGSLAMLQVSKRPL 69046 +EL+ DYD+ I YHPGK NVVADALS K V +G+L + V++ PL Sbjct: 850 MELVADYDLEIAYHPGKANVVADALSHKRVGAAPGQSVEALVSEIGALRLCAVAREPL 907 Score = 210 bits (529), Expect(2) = 2e-071 Identities = 110/225 (48%), Positives = 149/225 (65%) Frame = -1 Query: 38179 DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVI 38000 D+A++V+ C Q VK EH GG + L I EWKWD IT+DFV GLP S+ D+I+VI Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFVVGLP-VSRTKDAIWVI 1000 Query: 37999 VDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDEL 37820 VD+LTKSAHFL ++ LA+ Y+ E+V+ HGVPVSI+SDR S+FTS F FQ E+ Sbjct: 1001 VDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEM 1060 Query: 37819 GTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQ 37640 GT+V +S A+HPQT QSE TIQ LEDML +CVL++GG L +FAYN+ + ++I Sbjct: 1061 GTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYPASIG 1120 Query: 37639 MVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKID 37505 M F ALY R CR+ + + + G D +Q E++RV K++ Sbjct: 1121 MAPFEALYERPCRTPLCLTQVGERSIYGADYVQETTERIRVLKLN 1165 Score = 185 bits (464), Expect(2) = 1e-047 Identities = 94/160 (58%), Positives = 113/160 (69%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IPEWK + I +D VV L + K D IWVIV+RLTKSAHF+ ++ T LAK Y+ EI Sbjct: 972 IPEWKWDFITIDFVVGLPVSRTK-DAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKYVSEI 1030 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 V+LHGV +SI+SDR +KF S FW + E+GT+V +ST +HPQT QSE IQ LEDML Sbjct: 1031 VKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTKVQMSTAYHPQTYGQSERTIQTLEDMLR 1090 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 CV+D+G HW L LVEFAYNNSY S MAPFEALY R Sbjct: 1091 MCVLDWGGHWADHLSLVEFAYNNSYPASIGMAPFEALYER 1130 Score = 166 bits (417), Expect(2) = e-118 Identities = 90/164 (54%), Positives = 114/164 (68%), Gaps = 15/164 (9%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG VLM VI YASRQL+ HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 762 YMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYG 821 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK---- 57654 +V+TDH+SL Y+FTQ +LNLR+R+WMEL+ D D+ I YH GKANVVADALS K Sbjct: 822 GNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYDLEIAYHPGKANVVADALSHKRVGA 881 Query: 57655 ---------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK--GGFFACVEARSS 57798 V +G+L V+R PL E A+ R+ + ++ G A +A S Sbjct: 882 APGQSVEALVSEIGALRLCAVAREPLGLEAVDRADLLTRVRLAQEKDEGLIAAYKAEGS 940 Score = 132 bits (328), Expect = 9e-028 Identities = 86/208 (41%), Positives = 113/208 (53%), Gaps = 14/208 (6%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YH + + E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 548 GATCFSKIDLTSGYHLIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVF 607 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 ++ EEHE HLR V L+E+KL+ K SKC W +R G Sbjct: 608 QEVLDEFVIIFIDDILVYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFW----QREMG 663 Query: 68398 ---------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRL 68535 G D + + ++ +R L+ Y F S+A +T+L Sbjct: 664 FLGHIVSAEGVSVDPEKIEAIRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKL 723 Query: 68536 T*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 T K+V F+WS ECE F LK LT+ +L LP E ++VY Sbjct: 724 TGKDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPYMVY 765 Score = 88.9 bits (217), Expect(2) = 2e-071 Identities = 55/156 (35%), Positives = 79/156 (50%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R +SYAD RR L F V DR++L ++ ++G R KLSPRY+GPF I+ Sbjct: 1166 MKEAQDRQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFRIVERV 1225 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+LP A H VF VSM R + + VL +L +T V +L R Sbjct: 1226 GPVAYRLELPDVMRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPVRVLERR 1285 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 + R+ L++ + + W P R K+ F Sbjct: 1286 IKELRRKKIPLIKVLWDCDGVTKETWEPEARMKARF 1321 Score = 51.9 bits (122), Expect = 0.001 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 3/148 (2%) Frame = +1 Query: 54655 VITSTFLVCDCMTFVLFDPGYTFSYESSSFATGLDLYCDLLDMPIHVSTHVGESVIVEKM 54834 V T LV VLFD G + + + A+ ++ D + V G+ V V Sbjct: 301 VCVGTLLVGGVEAHVLFDSGASHCFITPESASRGNIRGDPGEQLGAVKVAGGQFVAVLGR 360 Query: 54835 *RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLAKPGTDSLV* 55014 + + G + DLII + +DVILGM WL LDC+ V+ +P SLV Sbjct: 361 TKGVDIQIAGESMPADLIISPVELYDVILGMDWLDHYRVHLDCHRGRVSFERP-EGSLVY 419 Query: 55015 EGDYISTPVRIISCLRAKRMVSKG---FLDF 55098 +G ++ +IS ++A++M+ KG +L+F Sbjct: 420 QGVRPTSGSLVISAVQAEKMIEKGCEAYLEF 450 Score = 42.2 bits (97), Expect = 1.1 Identities = 47/167 (28%), Positives = 62/167 (36%), Gaps = 1/167 (0%) Frame = -3 Query: 40904 LYALLTQLLEAIGQMRQAPAPALQGNPVVAAPEV*SSLVHVAALPNLEVRGMLLRE*KMI 40725 L LL QLLE + + AP AP V + V A EV L +M+ Sbjct: 100 LAGLLRQLLERLAGVVPVEAPV--------APRV--AEVQQRAAVAEEVPSYL----RMM 145 Query: 40724 GVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY 40548 QR+ FSG E A ++ S D H G A WWR+ Sbjct: 146 EQLQRIGTGYFSGGTSPEVADSWRSRVERNFGSSRCPAEYRIDLAVHFLEGDAHLWWRSV 205 Query: 40547 *ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTIS 40404 R ISW+ F F +++ P+ R+ HF L G IS Sbjct: 206 TARRR--QADISWADFVAEFNAKYFPQEALDRMEAHFLELTQGRGDIS 251 Score = 41.8 bits (96), Expect(2) = 7e-079 Identities = 22/41 (53%), Positives = 27/41 (65%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+AF+ LM +F+ LD FVIIF+DDILV LE Sbjct: 590 FGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDILVYSKSLE 630 Score = 41.4 bits (95), Expect = 2.0 Identities = 21/65 (32%), Positives = 32/65 (48%) Frame = +2 Query: 53759 FGVEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLS 53938 + ++ + + DA +WW+S + R ++WA F + F KY P DR FL Sbjct: 185 YRIDLAVHFLEGDAHLWWRSVTARR--RQADISWADFVAEFNAKYFPQEALDRMEAHFLE 242 Query: 53939 LEQGR 53953 L QGR Sbjct: 243 LTQGR 247 Score = 40.6 bits (93), Expect = 3.4 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 58065 DIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 D+ ++VA+C CQ VK EHQ PGG L+ +P E Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPE 974 Score = 34.8 bits (78), Expect(2) = 1e-047 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +2 Query: 69404 DIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 D+ ++V+ C CQ VK EHQ PGG+ +P Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLP 971 >emb|CAA32025.1| (X13777) ORF [Nicotiana tabacum] Length = 1328 Score = 393 bits (998), Expect(2) = e-118 Identities = 225/592 (38%), Positives = 340/592 (57%), Gaps = 16/592 (2%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 ++ L MSE + H+N FN +++QL ++ + E+E KA++L++SLP S+D + I Sbjct: 107 LYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHG 166 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENL 6435 + + +LK D ++L++ +RK+ ++ G AL R RS + N R + Sbjct: 167 KTTIELK-DVTSALLLNEKMRKKP--ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKN 223 Query: 6434 RT-DQT*LV*IVEKNDTFGRAIQSQRRNR-----IKNLEMTMIL*IQQRTLGML*FLV*T 6273 R+ + + F R + R+ + KN + T + Q ++ F+ Sbjct: 224 RSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAM--VQNNDNVVLFINEE 281 Query: 6272 ALLNH-----GFWILVHLS--HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIK 6114 H W++ + H++P ++LF + G+FG V + + +I G GD+CIK Sbjct: 282 EECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIK 341 Query: 6113 TTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTL 5934 T + L DVR++P ++ NLIS D GY + F W++ KG +V+A+G GTL Sbjct: 342 TNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTL 401 Query: 5933 YTTLGCI---NMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 Y T I ++ + +S LWH R+GHMS KG+++L K + K + C+ C Sbjct: 402 YRTNAEICQGELNAAQDEISVD-LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYC 460 Query: 5762 VMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFL 5583 + GKQ RVSF +T E +L + ++DV GP + S+GG++++VTFI D SRK+WVY L Sbjct: 461 LFGKQHRVSF-QTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYIL 519 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 K VF F+K+ A VE ++ K+KRLRSDNGGEY F +C++ GIR + VPG Sbjct: 520 KTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTP 579 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 + NG+ ERMN+ + E RSM +PK+FW V T YLINR PSVPL F+I E VW Sbjct: 580 QHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWT 639 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 KE+ YSHL+ FGC + HV E+R KL+ K++ C IGYG FGYR WD +K++R Sbjct: 640 NKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRS 699 Query: 5042 CDVTFDES 5019 DV F ES Sbjct: 700 RDVVFRES 707 Score = 250 bits (631), Expect(2) = 1e-094 Identities = 138/256 (53%), Positives = 174/256 (67%), Gaps = 6/256 (2%) Frame = -2 Query: 4950 GEE*PINVEADTQPTPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESF 4771 GE+ VE PT EE + Q LRRS R R R S Y+L+ D+ EPES Sbjct: 761 GEQLDEGVEEVEHPTQGEE-----QHQPLRRSERP-RVESRRYPSTEYVLISDDREPESL 814 Query: 4770 DEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR-RF 4594 E L + + AM +EM SL+KN T+ L +LP GKR L KWVF++K D K R+ Sbjct: 815 KEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRY 874 Query: 4593 KAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDK 4426 KA LVVKG D+ EIFSPVVK+TSIR +L + AS ++ +EQ+D KT FLHGDL++ Sbjct: 875 KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 934 Query: 4425 EIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYF 4246 EIYM+QP+GF V GK+HMVCKL +SLYGLKQAPRQWY KFDSFM + K DPC YF Sbjct: 935 EIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYF 994 Query: 4245 KKYT-NSYVFLLLYLDDMLIEG 4183 K+++ N+++ LLLY+DDMLI G Sbjct: 995 KRFSENNFIILLLYVDDMLIVG 1016 Score = 126 bits (314), Expect(2) = 1e-094 Identities = 63/100 (63%), Positives = 79/100 (79%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS +F+MKDLGPA+QILGMKI R+R++ L LSQE YIE+VL RF + +AKP +TPLA H Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 KLSK+ P TVEE+ +MA VPY+ A+ SL+ MVCTRPD Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128 Score = 102 bits (251), Expect(2) = 1e-040 Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 7/136 (5%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQK------LYRG 87726 T R W+ Q+KY++ +L+RF M +AK + TP+A KL + +TVE+K Y Sbjct: 1054 TSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSS 1113 Query: 87725 MIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSN 87549 +GSL+Y + +RPDI +VG+ +RF NP + H +AVK IL YL+GT+ + + GS+ Sbjct: 1114 AVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF-GGSD 1172 Query: 87548 FDLVGYADVDYVGYLVDRKSTTG 87480 L GY D D G + +RKS+TG Sbjct: 1173 PILKGYTDADMAGDIDNRKSSTG 1195 Score = 94.4 bits (231), Expect(2) = 1e-040 Identities = 47/121 (38%), Positives = 76/121 (61%) Frame = -2 Query: 87453 IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTSAINIV 87274 IS SK Q VALST EAEY+AA +++W+K+ L + GL ++ ++CD+ SAI++ Sbjct: 1205 ISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLS 1264 Query: 87273 KNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERNRLELG 87094 KN + H RTKH+D+R+H++R+ V+ + + + E AD+ T + R FE + +G Sbjct: 1265 KNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVG 1324 Query: 87093 M 87091 M Sbjct: 1325 M 1325 Score = 90.5 bits (221), Expect(3) = 3e-027 Identities = 51/129 (39%), Positives = 75/129 (57%), Gaps = 1/129 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T Q NG ER ++ ++E R++L +KLP +WGE + T YLINR + L + +V Sbjct: 578 TPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERV 637 Query: 65166 LYNK*PAYSYLKVFGCLCFPTL-NSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 NK +YS+LKVFGC F + + K + ++ P IF+GY GY++ D KK+ Sbjct: 638 WTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVI 697 Query: 65343 VSRDVSFYEN 65372 SRDV F E+ Sbjct: 698 RSRDVVFRES 707 Score = 62.5 bits (149), Expect(2) = e-118 Identities = 37/103 (35%), Positives = 56/103 (53%), Gaps = 3/103 (2%) Frame = -1 Query: 7102 MDSSKLEIEKFDGSD-FRIWKMQIEDYLYQKDLHESLT--GVKPKSMTEEKWKLKDR*AL 6932 M K E+ KF+G + F W+ ++ D L Q+ LH+ L KP +M E W D A Sbjct: 1 MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60 Query: 6931 GLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVYLMRR 6794 IRL LS +V +I+ E T G+ L ++Y + NK+YL ++ Sbjct: 61 SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQ 106 Score = 57.4 bits (136), Expect(3) = 3e-027 Identities = 37/121 (30%), Positives = 56/121 (45%) Frame = +1 Query: 64582 LYSYILLTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKY 64761 L SY T C +CL G+ + + F + N DL+ D+ P + + G KY Sbjct: 445 LISYAKGTTVKPCDYCL-FGKQHRVSFQTSSERKLN-ILDLVYSDVCGPMEIESMGGNKY 502 Query: 64762 FLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNI 64941 F+ +DD SR W +L K Q + F +LV + +K +R+ NG E+ S E Sbjct: 503 FVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEE 562 Query: 64942 Y 64944 Y Sbjct: 563 Y 563 Score = 55.8 bits (132), Expect = 9e-005 Identities = 32/93 (34%), Positives = 47/93 (50%) Frame = -2 Query: 88167 LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTC 87988 LWHKR+ H S+ L L K L+ K K C+ C GK + SF++ Sbjct: 424 LWHKRMGHMSEKGLQILAKKSLI---SYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNI 480 Query: 87987 SLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 L+L++ D+CGPM ++S G Y +DD +R Sbjct: 481 -LDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 512 Score = 23.5 bits (49), Expect(3) = 3e-027 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +2 Query: 64529 LWHNRLGHVS 64558 LWH R+GH+S Sbjct: 424 LWHKRMGHMS 433 >dbj|BAA22288.1| (D85597) polyprotein [Oryza australiensis] Length = 1317 Score = 194 bits (487), Expect(3) = e-117 Identities = 112/258 (43%), Positives = 157/258 (60%), Gaps = 8/258 (3%) Frame = -2 Query: 4947 EE*PINVEADTQPTPTEES--EEVTREQVLRRSSRTIRAPDRYSHSLHY-LLLIDEGEPE 4777 +E P V A T+P ++S V RRS R+ RAPDRY+ + +LL+D EP+ Sbjct: 737 QETPETVSATTEPQQEDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDNDEPK 796 Query: 4776 SFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKRR 4597 +++EA+ DS KW AM E+ S+ N W L D P G + + KW+F+ K DG Sbjct: 797 TYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVH 856 Query: 4596 -FKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDL 4432 +KA LV KG DY E FSPV L SIRI+L I A + + QMD KT FL+G+L Sbjct: 857 IYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNL 916 Query: 4431 DKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCC 4252 +++YM QP+GFV P +CKL +S+YGLKQA R W +FD + F K E++ C Sbjct: 917 SEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACV 976 Query: 4251 YFKKYTNSYVFLLLYLDDMLIEGSSM 4174 Y K ++ VFL+LY+DD+L+ G+ + Sbjct: 977 YKKVSGSAIVFLILYVDDILLIGNDI 1002 Score = 173 bits (434), Expect(3) = e-117 Identities = 96/283 (33%), Positives = 148/283 (51%) Frame = -3 Query: 5900 VAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTP 5721 ++ ++ + +WH RLGH++ K M+ L G L CESC++GK + FT Sbjct: 430 LSNDINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHS 489 Query: 5720 REP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWK 5541 LL + HTDV GP ++ GG ++++TF DFSR ++Y ++H S+ F FK+++ Sbjct: 490 ERA-SDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQ 548 Query: 5540 AEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILN 5361 EV+N +K LRSD GGEY F GI PG + NG+ ER N+ L Sbjct: 549 NEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLL 608 Query: 5360 EHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGC 5181 + RSM +P +FW + T A +NR PS + K E+W + S L+ +GC Sbjct: 609 DMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSVE-KTPYEIWTGQPPSLSFLKIWGC 667 Query: 5180 TTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKI 5052 Y V + +KL K+ KC+++GY GY F++ + K+ Sbjct: 668 EAY--VKRLQSDKLTPKSDKCFVVGYPKETKGYYFYNREQAKV 708 Score = 106 bits (262), Expect(3) = e-117 Identities = 54/110 (49%), Positives = 74/110 (67%) Frame = -3 Query: 4163 TIWTRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTT 3984 ++ + L +F MKDLG A ILG++I RDRS + LSQ YI+KVL RF ++D+K Sbjct: 1007 SVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFL 1066 Query: 3983 PLANHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYL 3834 P+++ LSK Q P+T +ERN M +VPYA AI S++ M+CTRPD Y L Sbjct: 1067 PMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYAL 1116 Score = 78.4 bits (190), Expect(2) = 1e-026 Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 7/135 (5%) Frame = -2 Query: 87495 KKHYRNDSFLGSCL----IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGL 87328 K YR+ S CL +S S KQ++VA ST EAEY+AA+ + +WIK+ +S+ G+ Sbjct: 1171 KDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGV 1230 Query: 87327 KIEQ---VPIFCDNTSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQI 87157 + ++CDN+ AI K H+++KH+ R+H +R+ V++G + + + I Sbjct: 1231 MTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNI 1290 Query: 87156 ADIFTMSLAREHFERNRLELGM 87091 AD T L + E + +G+ Sbjct: 1291 ADPLTKPLPQPKHEAHTRAMGI 1312 Score = 74.9 bits (181), Expect(2) = 1e-021 Identities = 40/131 (30%), Positives = 69/131 (52%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T Q NG ER+++ LL++ R+++ QS LP +WG + T +NR+ + + K +++ Sbjct: 593 TPQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSV-EKTPYEI 651 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHV 65345 + P+ S+LK++GC + DK P++ +GYP T GY + K+ V Sbjct: 652 WTGQPPSLSFLKIWGCEAY-VKRLQSDKLTPKSDKCFVVGYPKETKGYYFYNREQAKVFV 710 Query: 65346 SRDVSFYENVF 65378 +R F E F Sbjct: 711 ARHGVFLEKEF 721 Score = 71.0 bits (171), Expect(2) = 1e-026 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 9/130 (6%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGM------IGSLL 87708 + Q Y+ ++LKRF M D+K+ P++ L T +++ GM IGS++ Sbjct: 1043 LSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIM 1102 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV-- 87537 Y + +RPD+ +++ +R+Q++P E H AVK IL YL+ T D+ + Y G DLV Sbjct: 1103 YAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVY--GGEEDLVVS 1160 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 GY D + D +S +G Sbjct: 1161 GYTDASFQTDKDDYRSQSG 1179 Score = 58.2 bits (138), Expect = 2e-005 Identities = 33/93 (35%), Positives = 48/93 (51%) Frame = -2 Query: 88167 LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTC 87988 +WH RL H ++ ++ KL L L F+ + CE+C LGK K+ F +S Sbjct: 439 IWHCRLGHINKKRMEKLHKDGL---LHSFDFESFETCESCLLGKMTKAPFTGHSERASDL 495 Query: 87987 SLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 L L+H D+CGPM +RG Y DD++R Sbjct: 496 -LALVHTDVCGPMSSTARGGYQYFITFTDDFSR 527 Score = 57.8 bits (137), Expect(2) = 1e-021 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 3/124 (2%) Frame = +1 Query: 64579 LLYSYILLTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRL---DLWEPYHVLTHN 64749 LL+S+ + +T C CL G++ F T S R DLL L D+ P Sbjct: 460 LLHSFDFESFET-CESCLL-GKMTKAPF----TGHSERASDLLALVHTDVCGPMSSTARG 513 Query: 64750 GYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISH 64929 GY+YF+ DDFSR + L+ KS + + K F + V N TIK +R+ G E++S Sbjct: 514 GYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQ 573 Query: 64930 ETNIYLK 64950 E +LK Sbjct: 574 EFGNHLK 580 >dbj|BAA11674.1| (D83003) ORF(AA 1-1338) [Nicotiana tabacum] Length = 1338 Score = 410 bits (1042), Expect = e-111 Identities = 239/654 (36%), Positives = 376/654 (56%), Gaps = 25/654 (3%) Frame = -3 Query: 6914 FVKKRGVTHREGEDYVRSVEGTVKHV*KT-IGNEQGIFDA*MFNLQMSENGSVSDHINEF 6738 FV+ H G + RS+ ++ + + GN + + + ++ E +V+DH+NE Sbjct: 64 FVEDNVYNHISGVTHARSLWDKLEELYASKTGNNKLFYLTKLMQVKYVEGTTVADHLNEI 123 Query: 6737 NIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSRGSEKLKFDEIRDVVLSKS 6558 IV QL+ + I F+DE+ AL+++++LPESW+T+ I++S + + + ++ +L++ Sbjct: 124 QGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNSAPNGVVNMETVKSGILNEE 183 Query: 6557 IRKREVRDSSGSA--LSVN*RRRSKTKGQINMVDQNQRIEENLRTDQT*LV*IVEKNDTF 6384 +R+R SS + L+V R RS+ K Q N D+++ + F Sbjct: 184 MRRRSQGTSSSQSEVLAVTTRGRSQNKSQSNR-DKSRGKSNKFANVECHYCKKKGHIKRF 242 Query: 6383 GRAIQS-QRRNRIKNLEMTMIL*IQQRTLGML*FLV*TALLN----HGFWILVHLS--HS 6225 R Q+ Q++N+ K ++ + + G + ++N W++ + H+ Sbjct: 243 CRQFQNDQKKNKGKKVKPEESSDDETNSFGEFNVVYDDDIINLTTQEMTWVIDSGATIHA 302 Query: 6224 SPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLI 6045 +P +ELF ++ G+FG+V + + + GKGDVC++T + L DVR++P ++ NLI Sbjct: 303 TPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLI 362 Query: 6044 SVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDV--VAESVSGSCL 5871 SV + D GY F G WK+ KG ++VARGT LY T I+ V VAE+ S L Sbjct: 363 SVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASISQQVINVAENDSNIKL 422 Query: 5870 WHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKM 5691 WH RLGHMS K M LV K AL GL + C C+ GKQ RVSF + P + +L + Sbjct: 423 WHRRLGHMSEKSMARLVKKNALPGLNQIQLKKCADCLAGKQNRVSFKRFPPSRRQNVLDL 482 Query: 5690 THTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLK 5511 H+DV GP SLGG+R++VTFI D SRK WVY LK VF FK++ VE ++ K Sbjct: 483 VHSDVCGPFK-KSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGKK 541 Query: 5510 VKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINC 5331 +K +R+DNGGEY F A+C GIR P + NG+ ERMN+ L E R + + Sbjct: 542 LKCIRTDNGGEYQGQ-FDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHS 600 Query: 5330 GMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEK 5151 +PK FW + T AY++N P VPL +K E++W+ +++ Y LR FGC YVHV ++ Sbjct: 601 KLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDE 660 Query: 5150 RNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTF--DESVMYKDKEQKVLE-- 4983 R+KL+VK +C IGYG ++ GY+F+D +K++R DV F D+++ DK +K + Sbjct: 661 RSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDS 720 Query: 4982 ---------ITKQVGVEVE 4953 + +QVG +V+ Sbjct: 721 AEFELPPTVVPRQVGDDVQ 739 Score = 238 bits (601), Expect(2) = 9e-090 Identities = 128/235 (54%), Positives = 165/235 (69%), Gaps = 6/235 (2%) Frame = -2 Query: 4860 RSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWV 4681 RS R ++ RYS Y+LL D GEP+SF+EA+ E KW AM DE++SL +N T+ Sbjct: 787 RSGRVVQQSTRYSPH-EYVLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFE 845 Query: 4680 LTDLPAGKRALLNKWVFRIKT*PDGKR-RFKAHLVVKG*----ATDYAEIFSPVVKLTSI 4516 L LP GKRAL NKWVF++K RFKA LVVKG D+ EIFSPVVK+TSI Sbjct: 846 LVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSI 905 Query: 4515 RILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLK 4336 R +L + AS N+ +EQMD KT FLHGDL++EIYM+QP GF GKE VC+L +SLYGLK Sbjct: 906 RTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLK 965 Query: 4335 QAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNN 4159 QAPRQWYKKF+S M + + K D C + +K++ + ++ LLLY+DDMLI G ++ N+ Sbjct: 966 QAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINS 1025 Query: 4158 L 4156 L Sbjct: 1026 L 1026 Score = 122 bits (302), Expect(2) = 9e-090 Identities = 63/101 (62%), Positives = 73/101 (71%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS F MKDLGPAKQILGM+I RDR A L LSQE YIEKVL RF + K + PLAN Sbjct: 1029 QLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLAN 1088 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 HF+LS +QSP T +ER M +PYA A+ SL+ MVCTRPD Sbjct: 1089 HFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPD 1129 Score = 96.3 bits (236), Expect(2) = 3e-039 Identities = 47/131 (35%), Positives = 80/131 (60%) Frame = -2 Query: 87453 IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTSAINIV 87274 +S SK Q VALST EAE++AA C +++W+K+ L++ G + +FCD+ SAI++ Sbjct: 1206 VSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLA 1265 Query: 87273 KNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERNRLELG 87094 KN H R+KH+D+R++++RD +EK + + +E +D+ T +L + FE R G Sbjct: 1266 KNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCREAAG 1325 Query: 87093 MMKINYELEAE 87061 ++ Y + E Sbjct: 1326 IVDPPYSWKGE 1336 Score = 95.6 bits (234), Expect(2) = 3e-039 Identities = 54/131 (41%), Positives = 84/131 (63%), Gaps = 7/131 (5%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMIGSL 87711 W+ Q+KY++++L+RF M+ K + P+A +L + ST +++ Y +GSL Sbjct: 1060 WLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSL 1119 Query: 87710 LY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVG 87534 +Y + +RPDI +VG+ +RF +NP + H AVK IL YL+GTS L + + + N LVG Sbjct: 1120 MYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGE-DNPVLVG 1178 Query: 87533 YADVDYVGYLVDRKSTTG 87480 Y D D G + RKST+G Sbjct: 1179 YTDADMAGDVDSRKSTSG 1196 Score = 80.4 bits (195), Expect(3) = 2e-024 Identities = 46/129 (35%), Positives = 69/129 (52%), Gaps = 1/129 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T Q NG ER ++ L+E R LL SKLP +WGE ++T Y++N L K ++ Sbjct: 575 TPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKI 634 Query: 65166 LYNK*PAYSYLKVFGCLCFPTL-NSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + +Y L+VFGC + + + K + +T +F+GY + GYK D KK+ Sbjct: 635 WLGRDISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLV 694 Query: 65343 VSRDVSFYEN 65372 SRDV F E+ Sbjct: 695 RSRDVVFVED 704 Score = 62.1 bits (148), Expect = 1e-006 Identities = 37/130 (28%), Positives = 67/130 (51%) Frame = -2 Query: 88272 LVLIGKRDKHIYTVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIG 88093 +V G + +Y S ++++ ++ + + LWH+RL H S+ + +L+ K+ + G Sbjct: 389 MVARGTKQSKLYVTQASI--SQQVINVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPG 446 Query: 88092 LPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVF 87913 L + + K+ C C GK + SFK L+L+H D+CGP + +S G Y Sbjct: 447 LNQIQLKK---CADCLAGKQNRVSFKRFPPSRRQNVLDLVHSDVCGPFK-KSLGGARYFV 502 Query: 87912 VLVDDYTRNT 87883 +DD++R T Sbjct: 503 TFIDDHSRKT 512 Score = 56.6 bits (134), Expect(3) = 2e-024 Identities = 33/101 (32%), Positives = 49/101 (47%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C CL+ G+ N + F + DL+ D+ P+ + G +YF+ +DD SR T Sbjct: 455 CADCLA-GKQNRVSFKRFPPSRRQNVLDLVHSDVCGPFKK-SLGGARYFVTFIDDHSRKT 512 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 W L K Q K F++LV + +K IRT NG E+ Sbjct: 513 WVYTLKTKDQVFQVFKQFLTLVERETGKKLKCIRTDNGGEY 553 Score = 44.1 bits (102), Expect = 0.30 Identities = 22/103 (21%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Frame = -1 Query: 7102 MDSSKLEIEKFDGSDFRIWKMQIEDYLYQKDLHESL-TGVKPKSMTEEKWKLKDR*ALGL 6926 M++ ++ +G+++ +W+ +++D L+ +H + + KP+ ++E W+ + G Sbjct: 1 MEARTSKMVNLNGTNYHLWRNKMKDLLFVTKMHLPVFSSQKPEDKSDEDWEFEHNQVCGY 60 Query: 6925 IRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVYLMRR 6794 IR + NV HI L L +Y + NK++ + + Sbjct: 61 IRQFVEDNVYNHISGVTHARSLWDKLEELYASKTGNNKLFYLTK 104 Score = 25.1 bits (53), Expect(3) = 2e-024 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 Query: 64502 MSHGNSTDYLWHNRLGHVS 64558 ++ +S LWH RLGH+S Sbjct: 413 VAENDSNIKLWHRRLGHMS 431 >gb|AAF16534.1|AC013482_8 (AC013482) T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 218 bits (549), Expect(3) = e-111 Identities = 135/404 (33%), Positives = 203/404 (49%), Gaps = 10/404 (2%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H K +F G V L D +E++GKG++ I+ + + + +V YIP +K Sbjct: 305 NHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKT 364 Query: 6053 NLISVGQFDSTGY--------AAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 N++S+GQ GY ++ + S I K + R C+ M Sbjct: 365 NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYK 424 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFTKT 5724 ES LWH R GH++ G+++L K + GL + +CE C++GKQ ++SF K Sbjct: 425 EES----WLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKE 480 Query: 5723 PREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKW 5544 + L++ HTDV GP SL S+VF FKK+ Sbjct: 481 SSSRAQKPLELIHTDVCGPIKPKSL-----------------------EKSEVFKIFKKF 517 Query: 5543 KAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKIL 5364 KA VE +S L +K +RSD GGE+ F +C GIR VP +QNG+ ER N+ + Sbjct: 518 KAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTI 577 Query: 5363 NEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFG 5184 E ARSM + +PK WA V+ YL+NR P+ + K +E W ++ SHLR FG Sbjct: 578 LEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 637 Query: 5183 CTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + HV EKR+KL+ K+ K IGY +N GY+ ++ +K + ++ FDE Sbjct: 638 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 691 Score = 179 bits (450), Expect(3) = e-111 Identities = 97/256 (37%), Positives = 153/256 (58%), Gaps = 8/256 (3%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEES--EEVTREQVLR-RSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 E P + E T+PT S EE + E+ R RS + + +L L E EP Sbjct: 720 EEPPSEEPTTRPTSLTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMD 779 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RR 4597 F EA++ + W AMD+E++S++KNDTW LT LP G +A+ KWV++ K G+ R Sbjct: 780 FQEAIEKKT---WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 836 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY E+F+PV +L ++R+++ + A + QMD K FL+GD + Sbjct: 837 YKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFE 896 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP+G++V G+E V +L ++LYGLKQAPR W + D + + +F K + Y Sbjct: 897 EEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 956 Query: 4248 FKKYTNSYVFLLLYLDDMLIEGSS 4177 K + LY+DD++ G++ Sbjct: 957 IKIQKEDILIACLYVDDLIFTGNN 980 Score = 119 bits (295), Expect(2) = 2e-049 Identities = 57/131 (43%), Positives = 89/131 (67%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLTAS 87693 +I Q+ Y KE+LK+FKMDD+ + TP+ KL + G V+ ++ ++GSL YLT + Sbjct: 1019 FITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCT 1078 Query: 87692 RPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVDYV 87513 RPDI+++VG+ +R+ +P +H +A KRIL Y+KGT + G+ Y S++ LVGY+D D+ Sbjct: 1079 RPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWG 1138 Query: 87512 GYLVDRKSTTG 87480 + DRKST+G Sbjct: 1139 RDVDDRKSTSG 1149 Score = 106 bits (263), Expect(2) = 2e-049 Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDN 87295 ++G + SKKQ V LST EAEYVAA C +W++ L + L E+ IF DN Sbjct: 1153 YIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDN 1212 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SAI + KN V H R+KH+D R+H++R+ V K + + + +Q+ADIFT L RE F Sbjct: 1213 KSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFI 1272 Query: 87114 RNRLELGMMK 87085 + R LG+ K Sbjct: 1273 KMRSLLGVAK 1282 Score = 106 bits (263), Expect = 4e-020 Identities = 66/212 (31%), Positives = 112/212 (52%) Frame = -1 Query: 90328 YSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAK 90149 Y W +M+ + A D +W + KG + P ++EG+ D ++ + + K Sbjct: 18 YDNWSLQMKAILGAHD--VWEIVEKGFIEP---ENEGSLSQTQKDGLRDSRKR----DKK 68 Query: 90148 AKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSG 89969 A C++ GL D F ++ TSAK+ W+ L+ S++G QV+K ++ +L E+EA +MK G Sbjct: 69 ALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGEFEALQMKEG 128 Query: 89968 KSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLD 89789 + + D +R TV N L G+ ++KVLR +E VT I E KDL MT++ Sbjct: 129 ELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIE 188 Query: 89788 ELVRNLKTYEMNVDKRGEGNKENFFGLKSTEQ 89693 +L+ +L+ YE K+ E E ++ T++ Sbjct: 189 QLLGSLQAYE-EKKKKKEDIVEQVLNMRITKE 219 Score = 96.3 bits (236), Expect = 6e-017 Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 5/226 (2%) Frame = -2 Query: 88590 FQEEVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG--- 88420 ++++ +E +WY+DS S HM G K++F L+E Sbjct: 286 YKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRL 345 Query: 88419 -RSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKH 88243 D I VYY+ + N+LS+ QL +K + + + + + + + + Sbjct: 346 KNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNR 405 Query: 88242 IYTVDTSTIYDKKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKED 88066 ++ ++ I + CL + K+ LWH R H + L L K++V GLP + Sbjct: 406 MFVLN---IRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHP-N 461 Query: 88065 KVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVF 87913 +VCE C LGK K SF + + LELIH D+CGP++ +S EK VF Sbjct: 462 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL-EKSEVF 511 Score = 88.5 bits (216), Expect = 1e-014 Identities = 48/146 (32%), Positives = 80/146 (53%), Gaps = 2/146 (1%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG ERK++ +LE+AR++L +LP W E + YL+NR + K + Sbjct: 565 QQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 624 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVS 65348 + P S+L+VFG + + K K + ++ +IF+GY N+ GYK+ + TKK +S Sbjct: 625 GRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIIS 684 Query: 65349 RDVSF-YENVFPFTLFEVDFSFSTTLEK 65429 R++ F E + + E D++F E+ Sbjct: 685 RNIVFDEEGEWDWNSNEEDYNFFPHFEE 712 Score = 55.4 bits (131), Expect(3) = e-111 Identities = 31/103 (30%), Positives = 58/103 (56%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM D+G LG+++ ++ + + ++QE Y ++VL +F+++D+ P TP+ Sbjct: 991 MTKEFEMTDIGLMSYYLGIEVKQEDNR--IFITQEGYAKEVLKKFKMDDSNPVCTPMECG 1048 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 KLSK++ + V+ +LV + + CTRPD LY Sbjct: 1049 IKLSKKEEGEGVDPTTFKSLV-------GSLRYLTCTRPDILY 1084 >emb|CAB75932.1| (AL138658) putative protein [Arabidopsis thaliana] Length = 1339 Score = 231 bits (583), Expect(3) = e-110 Identities = 140/431 (32%), Positives = 221/431 (50%), Gaps = 14/431 (3%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H + SKE F + G V L ++ + + GKG V +K Q + +V Y+P ++ Sbjct: 308 NHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQ-VIPEVYYVPELRN 366 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKIV---KGVIVVARGTNSGTLYTTLG-------CINMD 5904 NL+S+GQ G A + G+ K+ KG I+ + + + C+ + Sbjct: 367 NLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTE 426 Query: 5903 VVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFT 5730 V + + LWH R GH++ +G+K+L K + GL +C C+ GKQ R S + Sbjct: 427 EVMDKENH--LWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMS 484 Query: 5729 KTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFK 5550 K L++ H+D+ GP S G R+ ++FI DF+RK WVYFL S+ FATFK Sbjct: 485 KKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFK 544 Query: 5549 KWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNK 5370 +KA VE + + LR+D GGE+ + F FC + GI +QNG+ ER N+ Sbjct: 545 IFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNR 604 Query: 5369 ILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRT 5190 + RSM +PK FW+ ++ NR P+ + EE W ++ + R Sbjct: 605 TIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRV 664 Query: 5189 FGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE--SV 5016 FGC YVH+ +KR+KL+ K+ KC +G +R +D +KI+ DV FDE S Sbjct: 665 FGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSW 724 Query: 5015 MYKDKEQKVLEITKQVGVEVELEKS 4941 + + + E+T + G E + + S Sbjct: 725 DWDQADVEAKEVTLECGDEDDEKNS 749 Score = 173 bits (434), Expect(3) = e-110 Identities = 98/261 (37%), Positives = 156/261 (59%), Gaps = 9/261 (3%) Frame = -2 Query: 4923 ADTQPTPTEESEEVTREQVLRRSSRTIRAPD----RYSHSLHYLLLIDEGEPESFDEALQ 4756 A + P P+ + +VTRE+ + + S+ L+++ E +P FD+A Sbjct: 776 APSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDA-- 833 Query: 4755 VEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLV 4579 V+D I W AM+ E+ S+ KN+TW LT LP G + KWV++ K DG+ ++KA LV Sbjct: 834 VKDKI-WREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLV 892 Query: 4578 VKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQ 4411 KG A DY E+F+PV +L ++R +L I + N + Q+D K+ FLHG+L +E+Y++ Sbjct: 893 AKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVR 952 Query: 4410 QPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTN 4231 QP+GF+ G+E V KL ++LYGLKQAPR WY + +++ K EF + + + K Sbjct: 953 QPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVG 1012 Query: 4230 SYVFLLLYLDDMLIEGSSMRENNNLDKVVC 4141 + + + LY+DD++ GS DK +C Sbjct: 1013 NILIVSLYVDDLIFTGS--------DKAMC 1034 Score = 126 bits (313), Expect(2) = 3e-053 Identities = 60/133 (45%), Positives = 92/133 (69%), Gaps = 2/133 (1%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G +I Q++Y +E+L RF MD++ + PI P TKL + G V++ +++ ++GSL+YLT Sbjct: 1067 GIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLT 1126 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSN--FDLVGYAD 87525 +RPD+++ V L +RF +NP+ SH A KRIL YLKGT +LG++Y + N L+ + D Sbjct: 1127 VTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTD 1186 Query: 87524 VDYVGYLVDRKSTTG 87480 DY G L DR+ST+G Sbjct: 1187 SDYAGDLNDRRSTSG 1201 Score = 112 bits (277), Expect(2) = 3e-053 Identities = 55/130 (42%), Positives = 82/130 (62%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF-CDNT 87292 + S I SKKQ VALST EAEY+AAA C Q +W+++ L G + + + CDN+ Sbjct: 1206 MASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNS 1265 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 S I + K+ V H ++KH+++R H+LRD V + + +C E+Q+ADIFT L E FE+ Sbjct: 1266 STIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEK 1325 Query: 87111 NRLELGMMKIN 87079 R LGM+ ++ Sbjct: 1326 LRALLGMVNMS 1336 Score = 108 bits (268), Expect = 1e-020 Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 6/225 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG---RSDEHSIDKVY 88387 W++DS CS HMTG+K F LEE I +VY Sbjct: 300 WFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVY 359 Query: 88386 YVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDK 88207 YV L +NLLS+ QL ++ ++ R +V + + ++ ++ + S K Sbjct: 360 YVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKP-QK 418 Query: 88206 KLVCLS---VLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK 88036 +CL V++K+ LWH R H +Q L L K +VIGLP K ++ +C C GK Sbjct: 419 NSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKE-ICAICLTGK 477 Query: 88035 *IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 + S K S+ L+L+H D+CGP+ S K Y+ +DD+TR T Sbjct: 478 QHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKT 528 Score = 88.2 bits (215), Expect = 2e-014 Identities = 55/199 (27%), Positives = 102/199 (50%) Frame = -1 Query: 90343 FNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKML 90164 F+G YY +W ME+F+++ ELW + +G IP I EA K L Sbjct: 15 FDG-YYDFWSMTMENFLRSR--ELWRLVEEG--IPAIVVGTTPVSEAQRSAVEEAKLKDL 69 Query: 90163 GKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAF 89984 K K L + + I +++K IW++++ ++G+T+V++ ++ +L E+E Sbjct: 70 ----KVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELL 125 Query: 89983 KMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLT 89804 MK G+ + + R TV+N++ + G+V V K+LR + V +I E+ DL+ Sbjct: 126 AMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLS 185 Query: 89803 NMTLDELVRNLKTYEMNVD 89747 +++DEL +L +E ++ Sbjct: 186 TLSIDELHGSLLVHEQRLN 204 Score = 69.5 bits (167), Expect(3) = 2e-021 Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T QQNG ERK++ ++ R++L + ++P +W E + ++ NR + + + Sbjct: 592 TPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEA 651 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + P Y +VFGC+ + + K K + ++ +FLG + +++ D KKI Sbjct: 652 WSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIV 711 Query: 65343 VSRDVSFYEN 65372 +S+DV F E+ Sbjct: 712 ISKDVVFDED 721 Score = 60.5 bits (144), Expect(3) = 2e-021 Identities = 36/113 (31%), Positives = 54/113 (46%) Frame = +1 Query: 64594 ILLTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMI 64773 IL K C CL+ G+ + K + S+ L+ D+ P ++H+G +Y L Sbjct: 462 ILKATKEICAICLT-GKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSF 520 Query: 64774 VDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 +DDF+R TW L KS T K F + V + + +RT G EF S+E Sbjct: 521 IDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNE 573 Score = 46.5 bits (108), Expect(3) = e-110 Identities = 28/99 (28%), Positives = 50/99 (50%) Frame = -3 Query: 4136 FEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLS 3957 FEM DLG K LG+++ + + + Q Y +VL+RF ++++ P+ KL+ Sbjct: 1045 FEMSDLGKMKHFLGIEVKQSDGG--IFICQRRYAREVLARFGMDESNAVKNPIVPGTKLT 1102 Query: 3956 KEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 K+++ + V+E LV + + TRPD +Y Sbjct: 1103 KDENGEKVDETMFKQLV-------GSLMYLTVTRPDLMY 1134 Score = 21.6 bits (44), Expect(3) = 2e-021 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = +2 Query: 64523 DYLWHNRLGHVS 64558 ++LWH R GH++ Sbjct: 433 NHLWHCRFGHLN 444 >gb|AAD17414.1| (AC006248) copia-like retroelement pol polyprotein [Arabidopsis thaliana] Length = 1166 Score = 226 bits (570), Expect(2) = e-107 Identities = 123/286 (43%), Positives = 163/286 (56%) Frame = -3 Query: 5861 RLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHT 5682 RLGHMS K M +LV +G L G + + CESCV+GK + SF HT Sbjct: 344 RLGHMSLKNMNVLVEEGYLSGKEVDKLEFCESCVLGKSHKQSFPTAK-----------HT 392 Query: 5681 DVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKR 5502 SLGG R++V+FI DFS+KVWVYFLK + + F++WK VENQ+ K+K Sbjct: 393 TK------ESLGGCRYFVSFIDDFSKKVWVYFLKTKDEAYHKFREWKQAVENQTGKKIKY 446 Query: 5501 LRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMP 5322 LR+DNG E+ + F C GI+ R +QNG+ ERMNK + + RSM GM Sbjct: 447 LRTDNGLEFYNTQFDNLCKEDGIKRHRTCTYTPQQNGVSERMNKTIMDIVRSMLAETGMS 506 Query: 5321 KTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNK 5142 + FWA ST YLINR P+ +GFK+ EEVW + SHLR FGC+ YVHV ++K Sbjct: 507 QEFWAEATSTAVYLINRTPNSFIGFKLPEEVWTGTKPDLSHLRRFGCSAYVHV---TQDK 563 Query: 5141 LNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKD 5004 + +AVK +GY + GYR W K K +V F+E+ +YKD Sbjct: 564 TSPRAVKGVFMGYPCGIKGYRVWLPKEGKCTTSRNVVFNETELYKD 609 Score = 191 bits (480), Expect(2) = e-107 Identities = 113/282 (40%), Positives = 171/282 (60%), Gaps = 13/282 (4%) Frame = -2 Query: 5019 CHVQGQRAEGSRDYKASGS*G*VGEE*PINVEADTQPTPTEESEEVTREQVLRRSSRTIR 4840 C + ++G +S EE +N E + + + RRS+ IR Sbjct: 650 CDLDDSSSQGGETSSSSSESSENLEESEMNEEVVGSENEQSLDDYLLARDMKRRSN--IR 707 Query: 4839 APDRYSHS--LHYLLL----IDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVL 4678 P R+ + Y L ++E EP+S++EAL+ +WE AM +EM S +K+ TW L Sbjct: 708 PPSRFEDEDFVAYALATAEDLEEEEPKSYEEALKSSKRKQWENAMKEEMDSHKKSHTWDL 767 Query: 4677 TDLPAGKRALLNKWVFRIKT*PDG--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSI 4516 + P ++ + KW+F++K G K+R+KA LV KG + DY E+FS VVK SI Sbjct: 768 IEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGIDYNEVFSLVVKHVSI 827 Query: 4515 RILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLK 4336 R++L ++ + + LEQMD KT FLHG+L++ I M QP+GF+ G E+ VC L +SLYGLK Sbjct: 828 RLMLSLMVNMDYELEQMDVKTAFLHGNLEERILMSQPEGFIQEGNENKVCLLRKSLYGLK 887 Query: 4335 QAPRQWYKKFDSFMTKSEFCKAEKDPCCYFK-KYTNSYVFLLLYLDDMLIEGSSM 4174 Q+PR W ++FD+FM +F ++ DPC Y + T+ ++LLLY+DDMLI +M Sbjct: 888 QSPRLWNQRFDAFMKDQKFERSCYDPCVYMRDTQTDKAIYLLLYVDDMLIASGNM 942 Score = 81.5 bits (198), Expect(2) = 2e-020 Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER +K ++++ R++L ++ + +W E T YLINR NS + K + Sbjct: 477 YTPQQNGVSERMNKTIMDIVRSMLAETGMSQEFWAEATSTAVYLINRTPNSFIGFKLPEE 536 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 V P S+L+ FGC + ++ +DK PR +F+GYP GY+V K Sbjct: 537 VWTGTKPDLSHLRRFGCSAY--VHVTQDKTSPRAVKGVFMGYPCGIKGYRVWLPKEGKCT 594 Query: 65343 VSRDVSFYE-NVFPFTLFEVD 65402 SR+V F E ++ TL D Sbjct: 595 TSRNVVFNETELYKDTLSSAD 615 Score = 69.9 bits (168), Expect(2) = 2e-023 Identities = 37/90 (41%), Positives = 54/90 (59%), Gaps = 1/90 (1%) Frame = -3 Query: 87749 VEQKLYRGMIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLG 87573 +E+ Y ++GSL+Y + SRPD+ F VG +RF ++P H AVK +L YLKG Sbjct: 982 MERIPYANVVGSLMYAMVGSRPDLAFVVGFISRFMSSPGREHWSAVKWVLRYLKGAYTQN 1041 Query: 87572 VWYLKGSNFDLVGYADVDYVGYLVDRKSTTG 87480 + + K S F + G++D DY L R+S TG Sbjct: 1042 LIFKKDSKFCIEGFSDSDYATDLDRRRSVTG 1072 Score = 68.7 bits (165), Expect(2) = 2e-023 Identities = 33/80 (41%), Positives = 49/80 (61%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G IS S Q+ VALST EAEY+A + +W+K S+ G K + V + CD+ S Sbjct: 1077 VGGNTISWKSSLQSVVALSTTEAEYMALTEAVKEAIWLKGLCSELGFKQDNVMVHCDSQS 1136 Query: 87288 AINIVKNLVQHKRTKHVDIR 87229 A+ + KN V H+RT+H+D + Sbjct: 1137 ALALAKNSVHHERTEHIDTK 1156 Score = 47.3 bits (110), Expect(2) = 2e-020 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +1 Query: 64750 GYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 G +YF+ +DDFS+ W L K + + V NQ IK +RT NGLEF Sbjct: 399 GCRYFVSFIDDFSKKVWVYFLKTKDEAYHKFREWKQAVENQTGKKIKYLRTDNGLEF 455 Score = 41.0 bits (94), Expect = 2.6 Identities = 23/93 (24%), Positives = 46/93 (48%) Frame = -1 Query: 90160 KNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFK 89981 K+ KAK ++V +G +I +C +A +W TL+ + T+ + L ++ +K Sbjct: 79 KSEKAKDLIVLNVGNQVLRKIKNCETAAAMWSTLKRLYMETSLPNRI---YLQLKFYTYK 135 Query: 89980 MKSGKSLQDMITRFTTVINELISLGKVYTTEEQ 89882 M +S+ + F ++ +L ++G T E Q Sbjct: 136 MTDSRSIDGNVDDFLKLVTDLNNIGVDVTEEVQ 168 Score = 40.2 bits (92), Expect = 4.4 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -3 Query: 4004 DAKPRTTPLANHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 +++P TP A HFK + E HM +PYA + SL+ MV +RPD Sbjct: 953 NSRPVITPTAAHFKFRSLSEEEKKTEAVHMERIPYANVVGSLMYAMVGSRPD 1004 >emb|CAA69272.1| (Y08010) lectin receptor kinase [Arabidopsis thaliana] Length = 623 Score = 202 bits (508), Expect(3) = e-104 Identities = 104/242 (42%), Positives = 142/242 (57%) Frame = -3 Query: 5747 KRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSD 5568 KRV F T +++ HTDV GP SLG S +++ FI DFSRK WVYFLK S+ Sbjct: 14 KRVKFKSTKT------VELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 67 Query: 5567 VFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGI 5388 VF FKK+KA VE +S L +K +RSD+GGE+ F +C GIR VP +QNG+ Sbjct: 68 VFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 127 Query: 5387 DERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELK 5208 ER N+ + E ARSM + +PK WA V+ YL+NR P+ + K +E W ++ Sbjct: 128 AERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 187 Query: 5207 YSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTF 5028 SHLR FG + HV EKRNKL+ K+ K IGY +N GY+ ++ +K + ++ F Sbjct: 188 VSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVF 247 Query: 5027 DE 5022 DE Sbjct: 248 DE 249 Score = 180 bits (453), Expect(3) = e-104 Identities = 99/256 (38%), Positives = 153/256 (59%), Gaps = 8/256 (3%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEES--EEVTREQVLR-RSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 E P + E T PT S EE + E+ R RS + + +L L E EP Sbjct: 278 EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMD 337 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RR 4597 F EA++ + W AMD+E++S++KNDTW LT LP G +A+ KWV++ K G+ R Sbjct: 338 FQEAIEKKT---WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 394 Query: 4596 FKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLD 4429 +KA LV KG + DY EIF+PV +L ++R+++ + A + QMD K+ FL+GDL+ Sbjct: 395 YKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 454 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP+G++V G+E V +L + LYGLKQAPR W + D + + +F K + Y Sbjct: 455 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 514 Query: 4248 FKKYTNSYVFLLLYLDDMLIEGSS 4177 K + LY+DD++ G++ Sbjct: 515 IKIQKEDILIACLYVDDLIFTGNN 538 Score = 88.9 bits (217), Expect(2) = 1e-024 Identities = 48/146 (32%), Positives = 81/146 (54%), Gaps = 2/146 (1%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG ERK++ +LE+AR++L +LP W E + YL+NR + K + Sbjct: 123 QQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 182 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVS 65348 + P S+L+VFG + + K +K + ++ +IF+GY N+ GYK+ + TKK +S Sbjct: 183 GRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIIS 242 Query: 65349 RDVSF-YENVFPFTLFEVDFSFSTTLEK 65429 R++ F E + + E D++F E+ Sbjct: 243 RNIVFDEEGEWDWNSNEEDYNFFPHFEE 270 Score = 53.9 bits (127), Expect(2) = 1e-024 Identities = 32/90 (35%), Positives = 48/90 (52%), Gaps = 6/90 (6%) Frame = +1 Query: 64663 PIKNTTS------SNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKS 64824 PI+N S S + +L+ D+ P + YFL+ +DDFSR TW L KS Sbjct: 7 PIQNELSKRVKFKSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKS 66 Query: 64825 NTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 + K F + V + + IK++R+ +G EF S E Sbjct: 67 EVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKE 102 Score = 47.3 bits (110), Expect(3) = e-104 Identities = 23/76 (30%), Positives = 47/76 (61%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM D+G LG+++ ++ + + ++QE Y ++VL +F+++D+ P TP+ Sbjct: 549 MTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKMDDSNPVCTPMECG 606 Query: 3968 FKLSKEQSPKTVEERN 3921 KLSK++ + V+ N Sbjct: 607 IKLSKKEEGEGVDPTN 622 Score = 45.7 bits (106), Expect = 0.10 Identities = 19/52 (36%), Positives = 33/52 (62%) Frame = -2 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 K I++ + ST ++ELIH D+CGP++ +S G+ Y + +DD++R T Sbjct: 6 KPIQNELSKRVKFKSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKT 57 Score = 39.9 bits (91), Expect = 5.8 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVE 87744 G +I Q+ Y KE+LK+FKMDD+ + TP+ KL + G V+ Sbjct: 575 GIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVD 619 >gb|AAD37020.1|AC007730_2 (AC007730) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 949 Score = 326 bits (828), Expect(2) = e-104 Identities = 183/372 (49%), Positives = 235/372 (62%), Gaps = 1/372 (0%) Frame = +2 Query: 56129 LVWEGDYISTPVRIISCLCAKRMVSKVC-LYLLAHLTDDTSKVPSIESVSIVREFLDVFS 56305 L ++G ++ +IS + A+RM+ K C YL T + ++ + IV EF DVF+ Sbjct: 72 LKFQGIRTTSGSLVISAIQAERMLGKGCEAYLATITTKEVGASAELKDILIVNEFSDVFA 131 Query: 56306 ADLCFDSL*VSRCFSCRPS*YATG*GY*FLY*CGTVTRPISIPPYRMAPAELRELKAQLQ 56485 A VS R + T PIS PYRMAPAE+ ELK QL+ Sbjct: 132 A--------VSGVPPDRSDPFTIE--------LEPGTTPISKAPYRMAPAEMAELKKQLE 175 Query: 56486 ELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQ 56665 ELL KGFIRPS++PWGA VLFVKKKD SFR+CI+YR LNKVT+KNKY +P ID+ D + Sbjct: 176 ELLAKGFIRPSSSPWGAPVLFVKKKDGSFRLCIDYRGLNKVTVKNKYPLPRIDELMDQLG 235 Query: 56666 GACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIF 56845 GA FSKIDL SGY Q+ I T+V KTAF TR GH+EF+V FGL NAPAAFM +MNG+F Sbjct: 236 GAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVF 295 Query: 56846 KPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGH 57025 + +L+ FVI+FIDDIL++SKS + L+AK K F SV FLGH Sbjct: 296 RDFLDEFVIIFIDDILVHSKSWEAHQEHLRAVLERLREHELFAKLSKFSFWQRSVGFLGH 355 Query: 57026 VVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQN 57205 V+S GV VD KI ++K W +P N +++ SF+GLA YYRRF+ F+S+A LT LT ++ Sbjct: 356 VISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKD 415 Query: 57206 VPFIWSGECEESF 57244 F WS ECE+SF Sbjct: 416 TAFNWSDECEKSF 428 Score = 259 bits (655), Expect(2) = 1e-084 Identities = 132/279 (47%), Positives = 184/279 (65%), Gaps = 1/279 (0%) Frame = -1 Query: 38344 DGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADF 38165 +G + +GR+ VP + IL EAH+ ++SIH G+ KMYRDL+++Y W GMR D+A + Sbjct: 534 NGTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMRKDVARW 593 Query: 38164 VSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGV-DSIYVIVDQL 37988 V++C Q VK EH G + L ISEWKWD ITMDFV LP K ++++V+VD+L Sbjct: 594 VAKCPTCQLVKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRL 653 Query: 37987 TKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRV 37808 TKSAHF+ + +A YI E++R HG+PVSI+SDR ++FTS F FQ LGTRV Sbjct: 654 TKSAHFMAISDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRV 713 Query: 37807 DLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 +LS A+HPQTD QSE TIQ LEDML CVL++GG +++ L +FAYN+ F ++I M + Sbjct: 714 NLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPY 773 Query: 37627 VALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 ALYGR CR+ + W + R G ++ E+++ KI Sbjct: 774 EALYGRACRTPLCWTPVGERRLFGPTIVDETTERMKFLKI 813 Score = 203 bits (512), Expect(2) = 4e-055 Identities = 100/195 (51%), Positives = 134/195 (68%), Gaps = 3/195 (1%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 SW H+ +LR VL+ LR+ L+AK SK FW +SV F GHV+S +G+ VDP KI +I W Sbjct: 316 SWEAHQEHLRAVLERLREHELFAKLSKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEW 375 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELI 38981 RP + TE+ SF+GL YYRRFV F++ A T L +D +F W +C+ SFL+LK ++ Sbjct: 376 PRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAML 435 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAV 38801 +AP+L L EG +T+Y DAS VG+ VLM++G I Y SR+L+ HE NYPT DLE+A Sbjct: 436 INAPVLVLPEEGEPYTVYTDASIVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAA 495 Query: 38800 IVFALMIWRHYLYGVQYE 38747 +VFAL IWR YL + E Sbjct: 496 VVFALKIWRSYLIRLAQE 513 Score = 187 bits (470), Expect = 2e-044 Identities = 108/256 (42%), Positives = 152/256 (59%), Gaps = 3/256 (1%) Frame = +1 Query: 69205 KTRSQGCNS***GSFED*GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALF 69384 KT Q N+ G+ G +DR L + E + +SIHP + K L+ Sbjct: 526 KTEYQTSNN---GTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYH 582 Query: 69385 VLPYEKGHSRFCISM--FELSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTL- 69555 + K +R+ +L +E P + I EWK + I +D V L + Sbjct: 583 WVGMRKDVARWVAKCPTCQLVKAEHQVPSGLLQNLP--ISEWKWDHITMDFVTRLPTGIK 640 Query: 69556 GKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSH 69735 K + +WV+V+RLTKSAHF+ + + +A+ YI EI+RLHG+ +SI+SDR T+F S Sbjct: 641 SKHNAVWVVVDRLTKSAHFMAISDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSK 700 Query: 69736 FWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAY 69915 FW + K LGTRV+LST +HPQTD QSE IQ LEDML ACV+D+G +W+++L L+EFAY Sbjct: 701 FWNAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAY 760 Query: 69916 NNSYHLSFEMAPFEALYGR 69972 NNS+ S M+P+EALYGR Sbjct: 761 NNSFQASIGMSPYEALYGR 779 Score = 138 bits (345), Expect(2) = 3e-062 Identities = 73/145 (50%), Positives = 99/145 (67%), Gaps = 1/145 (0%) Frame = +2 Query: 67610 QLVERECLAYMAHIGDTSVETNM-LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLG 67786 +++ + C AY+A I V + L+ IL+V+EF +VF + VPPD F I+++ G Sbjct: 93 RMLGKGCEAYLATITTKEVGASAELKDILIVNEFSDVFAA-VSGVPPDRSDPFTIELEPG 151 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 T PI PYR+ PAE+ E+K QL++LL K FIR S S WGAP+LFVK+KD +CIDYR Sbjct: 152 TTPISKAPYRMAPAEMAELKKQLEELLAKGFIRPSSSPWGAPVLFVKKKDGSFRLCIDYR 211 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGA 68044 LNK+T+ N YP+PRID+L D L GA Sbjct: 212 GLNKVTVKNKYPLPRIDELMDQLGGA 237 Score = 129 bits (322), Expect(2) = 3e-062 Identities = 88/210 (41%), Positives = 110/210 (51%), Gaps = 10/210 (4%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G FSKIDL S YHQ+ + D+ KTAF+TRYGH+EF+VM F LTNA A FM +MN Sbjct: 234 LGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNG 293 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW-LSVQRR 68388 FR + E H+ HLR V L+E +L+ K SK W SV Sbjct: 294 VFRDFLDEFVIIFIDDILVHSKSWEAHQEHLRAVLERLREHELFAKLSKFSFWQRSVGFL 353 Query: 68389 YH----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT* 68541 H G D + R + +R L+ Y F S+A LTRLT Sbjct: 354 GHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTG 413 Query: 68542 KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 K+ F WSDECE SF +LK L A +L LP E E + VY Sbjct: 414 KDTAFNWSDECEKSFLELKAMLINAPVLVLPEEGEPYTVY 453 Score = 122 bits (303), Expect = 8e-025 Identities = 69/150 (46%), Positives = 93/150 (62%), Gaps = 4/150 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S + + VDP+KI +IK+W RP + +I SFLGLAGYYRR ++S+ Sbjct: 356 VISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKD 415 Query: 68552 LSCGLTSVR----LVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVA 68719 + + L K+ +N +L + E +Y DAS +GLGCVLMQKG V+A Sbjct: 416 TAFNWSDECEKSFLELKAMLINAPVLVL--PEEGEPYTVYTDASIVGLGCVLMQKGSVIA 473 Query: 68720 YASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 YASRQL+ HEK Y HDLE+ VVFALKIW +YL Sbjct: 474 YASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYL 507 Score = 96.7 bits (237), Expect = 4e-017 Identities = 43/87 (49%), Positives = 58/87 (66%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVCVP L IL EAH S++SIHPG+ KMY DLK+++ W M+ D+ +V Sbjct: 535 GTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMRKDVARWV 594 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A+CP CQ VK EHQ P G L+ +P E Sbjct: 595 AKCPTCQLVKAEHQVPSGLLQNLPISE 621 Score = 83.9 bits (204), Expect(2) = 1e-084 Identities = 42/93 (45%), Positives = 57/93 (61%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KLSPRY+GP++++ Sbjct: 814 KLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIER 873 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDE 37230 G VAY+LDLPP + H VF VS R Y+ D+ Sbjct: 874 VGAVAYKLDLPPKLNVFHNVFHVSQLRKYLSDQ 906 Score = 81.5 bits (198), Expect(2) = e-104 Identities = 39/58 (67%), Positives = 45/58 (77%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYL 57480 + VY D S GLG VLM + +VI YASRQL+ HE NYPTHDL++AAVVFALK WR YL Sbjct: 450 YTVYTDASIVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYL 507 Score = 52.7 bits (124), Expect = 8e-004 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Frame = +1 Query: 54808 GESVIVEKM*RSCLVIFVGSNTYVDLIILDMVDFDVILGMTWLSPNFEILDCNAKTVTLA 54987 G+++ ++ R V+ G N DLII+ + DVILGM WL +DC+ + + Sbjct: 7 GQAMYPTRLVRGISVVVNGVNMPADLIIVPLKKHDVILGMDWLGKYKGHIDCHRERIQFE 66 Query: 54988 KPGTDSLV*EGDYISTPVRIISCLRAKRMVSKGFLDFLSHI-KDDTSKVSLIESLLIVRE 55164 + L +G ++ +IS ++A+RM+ KG +L+ I + + ++ +LIV E Sbjct: 67 R-DEGMLKFQGIRTTSGSLVISAIQAERMLGKGCEAYLATITTKEVGASAELKDILIVNE 125 Query: 55165 MIHSFASV 55188 FA+V Sbjct: 126 FSDVFAAV 133 Score = 41.0 bits (94), Expect(2) = 4e-055 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ +M +FR LD FVIIF+DDILV Sbjct: 278 FGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILV 312 >dbj|BAB11200.1| (AB022213) copia-type polyprotein [Arabidopsis thaliana] Length = 1334 Score = 240 bits (607), Expect(2) = e-104 Identities = 139/404 (34%), Positives = 205/404 (50%), Gaps = 15/404 (3%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H ++E F G V L D++ + +EGKG + ++ R Q + DV ++PG+K Sbjct: 305 NHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGLKN 363 Query: 6053 NLISVGQFDSTGYAAVFGKGS----WKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESV 5886 NL SVGQ G + +G W + +V+ ++ + E Sbjct: 364 NLFSVGQLQQKGLRFII-EGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEET 422 Query: 5885 -------SGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG----LCESCVMGKQKRV 5739 + +WH R GH++ +G++ L K ++GL FD+G +C+ C+ GKQ R Sbjct: 423 RCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 482 Query: 5738 SFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFA 5559 S K +L++ HTD+ GP +S G R+ + FI DFSRK W Y L S+ F Sbjct: 483 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQ 542 Query: 5558 TFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDER 5379 FK++KAEVE +S K+ LRSD GGEY+ F +C GI+ +QNG+ ER Sbjct: 543 FFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAER 602 Query: 5378 MNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSH 5199 N+ + R M + +P+ FW V Y++NR PS L EE W + H Sbjct: 603 KNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEH 662 Query: 5198 LRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 LR FG Y V +KR KL+ K++KC + G YR +D KIL DV FDE Sbjct: 663 LRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDE 721 Score = 167 bits (418), Expect(2) = e-104 Identities = 101/259 (38%), Positives = 154/259 (58%), Gaps = 28/259 (10%) Frame = -2 Query: 4950 GEE*P-INVEADTQPTPTEESEEVTREQV-----------LRRSSRTIRAPDRYSHSLHY 4807 GEE P IN TEE EE E V +R+ + + D + Sbjct: 747 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 806 Query: 4806 LLLIDE-----------GEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAG 4660 L+ DE G+P F+EA Q+E W AM+ E+ S+E+N+TW L +LP Sbjct: 807 LITQDEEDEVLALFIGPGDPVCFEEAAQLE---VWRKAMEAEITSIEENNTWELVELPEE 863 Query: 4659 KRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIV 4495 + + KW+F+ K G+ +FKA LV KG D+ E+F+PV K +IR++L + Sbjct: 864 AKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLA 923 Query: 4494 ASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWY 4315 A + + Q+D K+ FLHGDL ++++++QPKGF V + V KL ++LYGLKQAPR WY Sbjct: 924 AEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWY 983 Query: 4314 KKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 + + F K F K + + KK + ++ + +Y+DD++ GSSM Sbjct: 984 SRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSM 1030 Score = 134 bits (334), Expect(2) = 2e-055 Identities = 62/139 (44%), Positives = 92/139 (65%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 ++ RG +I+Q+KY E++K++ M+ + PI P KL G G V+ ++ +IG Sbjct: 1060 VIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIG 1119 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 SL YLT +RPD++FSV L +R+ +P E H+ AVKRIL Y++GT DLG+ Y +G +LV Sbjct: 1120 SLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELV 1179 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 G+ D DY G + DRKST+G Sbjct: 1180 GFVDSDYAGDVDDRKSTSG 1198 Score = 119 bits (295), Expect = 7e-024 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 9/269 (3%) Frame = -2 Query: 88677 QMGS*KSYSPFFSKQRTQANLGS*I*PLIFQEEVR-ESKQQWYMDSACSRHMTGNKTLFL 88501 +MG K+ P + K+ + + + E++ E KQ W++DS CS HM G + FL Sbjct: 256 KMGHYKAECPSWEKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFL 315 Query: 88500 SLEEXXXXXXXXXXXXXXXXXXXXXXGRSDE---HSIDKVYYVKGLIHNLLSISQLCDKE 88330 L+ + I VY+V GL +NL S+ QL K Sbjct: 316 ELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKG 375 Query: 88329 NKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLV----CLSVLEKDPLLW 88162 + I EV + +++V+ K+ V + + K CL V+ K +W Sbjct: 376 LRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMW 435 Query: 88161 HKRLRHASQVQLNKLITKDLVIGLPK-NKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCS 87985 HKR H + L L K++V GLPK + +E+ VC+ C GK I+ S + ST Sbjct: 436 HKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQV 495 Query: 87984 LELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 L+L+H D+CGP+ S K Y+ +DD++R Y+ Sbjct: 496 LQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYL 533 Score = 111 bits (274), Expect(2) = 2e-055 Identities = 55/128 (42%), Positives = 84/128 (64%), Gaps = 1/128 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG I+ SKKQ V LST EAE+V+A+ Q +W++ L + G + E +FCDN+ Sbjct: 1203 LGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNS 1262 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 S I + KN V H R+KH+ +R+HFLR+ V++G I +++CT +Q+ADI T ++ RE FE Sbjct: 1263 STIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEE 1322 Query: 87111 NRLELGMMK 87085 R +G+ + Sbjct: 1323 LRGRMGVRR 1331 Score = 71.4 bits (172), Expect(3) = 2e-022 Identities = 36/129 (27%), Positives = 70/129 (53%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ERK++ ++ + R +L + +P ++W E + Y++NR + L++ + Sbjct: 592 YTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEE 651 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKD-KFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 + P+ +L++FG L + + K K + ++ + G + Y++ D +T KI Sbjct: 652 KWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKI 711 Query: 65340 HVSRDVSFYE 65369 +SRDV F E Sbjct: 712 LISRDVQFDE 721 Score = 69.9 bits (168), Expect = 5e-009 Identities = 47/200 (23%), Positives = 96/200 (47%) Frame = -1 Query: 90343 FNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKML 90164 F+G Y W ME+ I+++++ W I G I E N + A A+ + Sbjct: 12 FDGDY-EHWAMLMENLIRSKEW--WDIIETG-----IPRPERNVILTGAQRTELAEKTV- 62 Query: 90163 GKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAF 89984 K+ K K L + I ++K +W++++ ++G +V+ ++ L +E Sbjct: 63 -KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVL 121 Query: 89983 KMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLT 89804 +MK G+++ +R + N++ +LG+ + V+K+LR + V AI E+ ++ Sbjct: 122 EMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIK 181 Query: 89803 NMTLDELVRNLKTYEMNVDK 89744 +T+D L +L +E N+ + Sbjct: 182 ELTVDGLQSSLMVHEQNLSR 201 Score = 60.5 bits (144), Expect(3) = 2e-022 Identities = 37/116 (31%), Positives = 58/116 (49%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 ++ C CL QI I P ++ S + L+ D+ P + + +G +Y L +DDF Sbjct: 467 EEAVCDICLKGKQIRESI-PKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 SR WT LL+ KS T Q K F + V + + +R+ G E+ S E + Y K+ Sbjct: 526 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKE 581 Score = 23.1 bits (48), Expect(3) = 2e-022 Identities = 11/45 (24%), Positives = 23/45 (50%), Gaps = 6/45 (13%) Frame = +2 Query: 64499 CMSHGNSTDYLWHNRLGHVSFIKMKGISSIH-ISFSPK-----KHFVCTVC 64633 C+ + +WH R GH++ ++ ++ + PK + VC +C Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDIC 474 >gb|AAF25964.1|AC017118_1 (AC017118) F6N18.1 [Arabidopsis thaliana] Length = 1463 Score = 240 bits (607), Expect(2) = e-103 Identities = 139/404 (34%), Positives = 205/404 (50%), Gaps = 15/404 (3%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H ++E F G V L D++ + +EGKG + ++ R Q + DV ++PG+K Sbjct: 210 NHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGLKN 268 Query: 6053 NLISVGQFDSTGYAAVFGKGS----WKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESV 5886 NL SVGQ G + +G W + +V+ ++ + E Sbjct: 269 NLFSVGQLQQKGLRFII-EGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEET 327 Query: 5885 -------SGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG----LCESCVMGKQKRV 5739 + +WH R GH++ +G++ L K ++GL FD+G +C+ C+ GKQ R Sbjct: 328 RCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 387 Query: 5738 SFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFA 5559 S K +L++ HTD+ GP +S G R+ + FI DFSRK W Y L S+ F Sbjct: 388 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQ 447 Query: 5558 TFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDER 5379 FK++KAEVE +S K+ LRSD GGEY+ F +C GI+ +QNG+ ER Sbjct: 448 FFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAER 507 Query: 5378 MNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSH 5199 N+ + R M + +P+ FW V Y++NR PS L EE W + H Sbjct: 508 KNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEH 567 Query: 5198 LRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 LR FG Y V +KR KL+ K++KC + G YR +D KIL DV FDE Sbjct: 568 LRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDE 626 Score = 164 bits (411), Expect(2) = e-103 Identities = 100/259 (38%), Positives = 153/259 (58%), Gaps = 28/259 (10%) Frame = -2 Query: 4950 GEE*P-INVEADTQPTPTEESEEVTREQV-----------LRRSSRTIRAPDRYSHSLHY 4807 GEE P IN TEE EE E V +R+ + + D + Sbjct: 652 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 711 Query: 4806 LLLIDE-----------GEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAG 4660 L+ DE +P F+EA Q+E W AM+ E+ S+E+N+TW L +LP Sbjct: 712 LITQDEEDEVLALFIGPDDPVCFEEAAQLE---VWRKAMEAEITSIEENNTWELVELPEE 768 Query: 4659 KRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIV 4495 + + KW+F+ K G+ +FKA LV KG D+ E+F+PV K +IR++L + Sbjct: 769 AKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLA 828 Query: 4494 ASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWY 4315 A + + Q+D K+ FLHGDL ++++++QPKGF V + V KL ++LYGLKQAPR WY Sbjct: 829 AEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWY 888 Query: 4314 KKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 + + F K F K + + KK + ++ + +Y+DD++ GSSM Sbjct: 889 SRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSM 935 Score = 119 bits (295), Expect = 7e-024 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 9/269 (3%) Frame = -2 Query: 88677 QMGS*KSYSPFFSKQRTQANLGS*I*PLIFQEEVR-ESKQQWYMDSACSRHMTGNKTLFL 88501 +MG K+ P + K+ + + + E++ E KQ W++DS CS HM G + FL Sbjct: 161 KMGHYKAECPSWEKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFL 220 Query: 88500 SLEEXXXXXXXXXXXXXXXXXXXXXXGRSDE---HSIDKVYYVKGLIHNLLSISQLCDKE 88330 L+ + I VY+V GL +NL S+ QL K Sbjct: 221 ELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKG 280 Query: 88329 NKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLV----CLSVLEKDPLLW 88162 + I EV + +++V+ K+ V + + K CL V+ K +W Sbjct: 281 LRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMW 340 Query: 88161 HKRLRHASQVQLNKLITKDLVIGLPK-NKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCS 87985 HKR H + L L K++V GLPK + +E+ VC+ C GK I+ S + ST Sbjct: 341 HKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQV 400 Query: 87984 LELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 L+L+H D+CGP+ S K Y+ +DD++R Y+ Sbjct: 401 LQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYL 438 Score = 85.4 bits (208), Expect(2) = 2e-028 Identities = 46/139 (33%), Positives = 69/139 (49%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 ++ RG +I+Q+KY E++K++ M+ + PI P KL Sbjct: 965 VIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLT------------------ 1006 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 G +R+ +P E H+ AVKRIL Y++GT DLG+ Y +G +LV Sbjct: 1007 --------------KAGAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELV 1052 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 G+ D DY G + DRKST+G Sbjct: 1053 GFVDSDYAGDVDDRKSTSG 1071 Score = 71.4 bits (172), Expect(3) = 2e-022 Identities = 36/129 (27%), Positives = 70/129 (53%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ERK++ ++ + R +L + +P ++W E + Y++NR + L++ + Sbjct: 497 YTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEE 556 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKD-KFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 + P+ +L++FG L + + K K + ++ + G + Y++ D +T KI Sbjct: 557 KWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKI 616 Query: 65340 HVSRDVSFYE 65369 +SRDV F E Sbjct: 617 LISRDVQFDE 626 Score = 70.2 bits (169), Expect(2) = 2e-028 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDNT 87292 LG I+ SKKQ V LST EAE+V+A+ Q +W++ L + G + E +FCDN+ Sbjct: 1076 LGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNS 1135 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTM 87139 S I + KN V H R IRH F DN + + +NF +Q + + ++ Sbjct: 1136 STIKLSKNPVLHGRI----IRHIFFPDNNQNISVLINFLMSNKQSSQLISL 1182 Score = 60.5 bits (144), Expect(3) = 2e-022 Identities = 37/116 (31%), Positives = 58/116 (49%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 ++ C CL QI I P ++ S + L+ D+ P + + +G +Y L +DDF Sbjct: 372 EEAVCDICLKGKQIRESI-PKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 430 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 SR WT LL+ KS T Q K F + V + + +R+ G E+ S E + Y K+ Sbjct: 431 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKE 486 Score = 53.9 bits (127), Expect = 3e-004 Identities = 25/106 (23%), Positives = 57/106 (53%) Frame = -1 Query: 90061 LQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQ 89882 ++ ++G +V+ ++ L +E +MK G+++ +R + N++ +LG+ + Sbjct: 1 MKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKV 60 Query: 89881 VDKVLRIFPRSWEIKVTAIREAKDLTNMTLDELVRNLKTYEMNVDK 89744 V+K+LR + V AI E+ ++ +T+D L +L +E N+ + Sbjct: 61 VEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNLSR 106 Score = 23.1 bits (48), Expect(3) = 2e-022 Identities = 11/45 (24%), Positives = 23/45 (50%), Gaps = 6/45 (13%) Frame = +2 Query: 64499 CMSHGNSTDYLWHNRLGHVSFIKMKGISSIH-ISFSPK-----KHFVCTVC 64633 C+ + +WH R GH++ ++ ++ + PK + VC +C Sbjct: 329 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDIC 379 >gb|AAG12968.1|AC055769_6 (AC055769) copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana] Length = 1334 Score = 240 bits (607), Expect(2) = e-103 Identities = 139/404 (34%), Positives = 205/404 (50%), Gaps = 15/404 (3%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H ++E F G V L D++ + +EGKG + ++ R Q + DV ++PG+K Sbjct: 305 NHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGLKN 363 Query: 6053 NLISVGQFDSTGYAAVFGKGS----WKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESV 5886 NL SVGQ G + +G W + +V+ ++ + E Sbjct: 364 NLFSVGQLQQKGLRFII-EGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEET 422 Query: 5885 -------SGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG----LCESCVMGKQKRV 5739 + +WH R GH++ +G++ L K ++GL FD+G +C+ C+ GKQ R Sbjct: 423 RCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 482 Query: 5738 SFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFA 5559 S K +L++ HTD+ GP +S G R+ + FI DFSRK W Y L S+ F Sbjct: 483 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQ 542 Query: 5558 TFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDER 5379 FK++KAEVE +S K+ LRSD GGEY+ F +C GI+ +QNG+ ER Sbjct: 543 FFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAER 602 Query: 5378 MNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSH 5199 N+ + R M + +P+ FW V Y++NR PS L EE W + H Sbjct: 603 KNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEH 662 Query: 5198 LRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 LR FG Y V +KR KL+ K++KC + G YR +D KIL DV FDE Sbjct: 663 LRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDE 721 Score = 164 bits (411), Expect(2) = e-103 Identities = 100/259 (38%), Positives = 153/259 (58%), Gaps = 28/259 (10%) Frame = -2 Query: 4950 GEE*P-INVEADTQPTPTEESEEVTREQV-----------LRRSSRTIRAPDRYSHSLHY 4807 GEE P IN TEE EE E V +R+ + + D + Sbjct: 747 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 806 Query: 4806 LLLIDE-----------GEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAG 4660 L+ DE +P F+EA Q+E W AM+ E+ S+E+N+TW L +LP Sbjct: 807 LITQDEEDEVLALFIGPDDPVCFEEAAQLE---VWRKAMEAEITSIEENNTWELVELPEE 863 Query: 4659 KRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIV 4495 + + KW+F+ K G+ +FKA LV KG D+ E+F+PV K +IR++L + Sbjct: 864 AKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLA 923 Query: 4494 ASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWY 4315 A + + Q+D K+ FLHGDL ++++++QPKGF V + V KL ++LYGLKQAPR WY Sbjct: 924 AEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWY 983 Query: 4314 KKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 + + F K F K + + KK + ++ + +Y+DD++ GSSM Sbjct: 984 SRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSM 1030 Score = 134 bits (334), Expect(2) = 2e-055 Identities = 62/139 (44%), Positives = 92/139 (65%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 ++ RG +I+Q+KY E++K++ M+ + PI P KL G G V+ ++ +IG Sbjct: 1060 VIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIG 1119 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 SL YLT +RPD++FSV L +R+ +P E H+ AVKRIL Y++GT DLG+ Y +G +LV Sbjct: 1120 SLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELV 1179 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 G+ D DY G + DRKST+G Sbjct: 1180 GFVDSDYAGDVDDRKSTSG 1198 Score = 119 bits (295), Expect = 7e-024 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 9/269 (3%) Frame = -2 Query: 88677 QMGS*KSYSPFFSKQRTQANLGS*I*PLIFQEEVR-ESKQQWYMDSACSRHMTGNKTLFL 88501 +MG K+ P + K+ + + + E++ E KQ W++DS CS HM G + FL Sbjct: 256 KMGHYKAECPSWEKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFL 315 Query: 88500 SLEEXXXXXXXXXXXXXXXXXXXXXXGRSDE---HSIDKVYYVKGLIHNLLSISQLCDKE 88330 L+ + I VY+V GL +NL S+ QL K Sbjct: 316 ELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKG 375 Query: 88329 NKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLV----CLSVLEKDPLLW 88162 + I EV + +++V+ K+ V + + K CL V+ K +W Sbjct: 376 LRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMW 435 Query: 88161 HKRLRHASQVQLNKLITKDLVIGLPK-NKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCS 87985 HKR H + L L K++V GLPK + +E+ VC+ C GK I+ S + ST Sbjct: 436 HKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQV 495 Query: 87984 LELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 L+L+H D+CGP+ S K Y+ +DD++R Y+ Sbjct: 496 LQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYL 533 Score = 111 bits (274), Expect(2) = 2e-055 Identities = 55/128 (42%), Positives = 84/128 (64%), Gaps = 1/128 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG I+ SKKQ V LST EAE+V+A+ Q +W++ L + G + E +FCDN+ Sbjct: 1203 LGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNS 1262 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 S I + KN V H R+KH+ +R+HFLR+ V++G I +++CT +Q+ADI T ++ RE FE Sbjct: 1263 STIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEE 1322 Query: 87111 NRLELGMMK 87085 R +G+ + Sbjct: 1323 LRGRMGVRR 1331 Score = 71.4 bits (172), Expect(3) = 2e-022 Identities = 36/129 (27%), Positives = 70/129 (53%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ERK++ ++ + R +L + +P ++W E + Y++NR + L++ + Sbjct: 592 YTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEE 651 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKD-KFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 + P+ +L++FG L + + K K + ++ + G + Y++ D +T KI Sbjct: 652 KWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKI 711 Query: 65340 HVSRDVSFYE 65369 +SRDV F E Sbjct: 712 LISRDVQFDE 721 Score = 69.9 bits (168), Expect = 5e-009 Identities = 47/200 (23%), Positives = 96/200 (47%) Frame = -1 Query: 90343 FNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKML 90164 F+G Y W ME+ I+++++ W I G I E N + A A+ + Sbjct: 12 FDGDY-EHWAMLMENLIRSKEW--WDIIETG-----IPRPERNVILTGAQRTELAEKTV- 62 Query: 90163 GKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAF 89984 K+ K K L + I ++K +W++++ ++G +V+ ++ L +E Sbjct: 63 -KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVL 121 Query: 89983 KMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLT 89804 +MK G+++ +R + N++ +LG+ + V+K+LR + V AI E+ ++ Sbjct: 122 EMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIK 181 Query: 89803 NMTLDELVRNLKTYEMNVDK 89744 +T+D L +L +E N+ + Sbjct: 182 ELTVDGLQSSLMVHEQNLSR 201 Score = 60.5 bits (144), Expect(3) = 2e-022 Identities = 37/116 (31%), Positives = 58/116 (49%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 ++ C CL QI I P ++ S + L+ D+ P + + +G +Y L +DDF Sbjct: 467 EEAVCDICLKGKQIRESI-PKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 SR WT LL+ KS T Q K F + V + + +R+ G E+ S E + Y K+ Sbjct: 526 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKE 581 Score = 23.1 bits (48), Expect(3) = 2e-022 Identities = 11/45 (24%), Positives = 23/45 (50%), Gaps = 6/45 (13%) Frame = +2 Query: 64499 CMSHGNSTDYLWHNRLGHVSFIKMKGISSIH-ISFSPK-----KHFVCTVC 64633 C+ + +WH R GH++ ++ ++ + PK + VC +C Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDIC 474 >emb|CAA30503.1| (X07656) pol polypeptide (AA 1-982) [Drosophila melanogaster] Length = 982 Score = 213 bits (536), Expect(3) = e-101 Identities = 136/405 (33%), Positives = 204/405 (49%), Gaps = 3/405 (0%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 SH + +F F+ + K+ LA N L +G G V +KT L L++V ++P + Sbjct: 21 SHMCCDRSVFTEFEE-HTEKISLAGNGFLLAKGIGTVKLKTDLCTL-VLNNVLFVPDLNG 78 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC 5874 N +SV + FG +++ + R +G LY G N A GS Sbjct: 79 NFMSVSRAAQYKCFVNFGPHYADVIQEGERILRVMRAGNLYMFQGKHNSCFAAVDADGS- 137 Query: 5873 LWHNRLGHMSAKGMKMLVAKGALEGLKSFDM---GLCESCVMGKQKRVSFTKTPREP*KV 5703 LWH R GH++ ++ +V K + G++ +C++C++ K F KT R + Sbjct: 138 LWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDAVCKTCMLAKIHVQPFPKTTRSRAEE 197 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 LL M H+D+ GP SL GS++++TFI D SR+++VYFL+ +VF F ++K VE Q Sbjct: 198 LLDMIHSDLCGPFSTPSLAGSKYFLTFIDDKSRRIFVYFLRKKDEVFTKFVEFKKLVERQ 257 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 + K+K +RSDNGGE+ + F + A GI +P +QNG+ ER N+ L E AR M Sbjct: 258 TGRKIKCIRSDNGGEFVNNVFDDYLKAHGIARQLTIPHTPQQNGVAERANRTLVEMARCM 317 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 + + + WA ++T YL NR S L K E W K SHLR FG Sbjct: 318 LLQSELGEALWAEAINTAVYLRNRSTSRALQSKTPMEEWTGKIPAVSHLRVFGAIAVALD 377 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 + K K + +IGY GYR +D + R ++ DV FDES Sbjct: 378 KGVHKGKFESKGKEYRMIGYSIAAKGYRLFDKEKRCVIEKQDVLFDES 425 Score = 157 bits (392), Expect(3) = e-101 Identities = 90/261 (34%), Positives = 141/261 (53%), Gaps = 7/261 (2%) Frame = -2 Query: 4938 PINVEADTQPTPTEESEEVTREQVLRRSSRTIRA--PDRYSHSLHYLLLIDEGEPESFDE 4765 P+ D + E EV + RT R P + + L L+ D P+S++E Sbjct: 461 PVGSSDDYESAAEAEEAEVHVGPGRPKIVRTGRPGRPKKQYNVLGVLMASDVEIPKSYEE 520 Query: 4764 ALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKA 4588 A+ + S KWE AM E ++L N+TW L DLP +R + KWV+ +K G+ RFKA Sbjct: 521 AINSQYSAKWEEAMGLEYKALLANETWKLADLPRNRRCVACKWVYSLKRDVSGRIERFKA 580 Query: 4587 HLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEI 4420 LV KG + DY E FSPV +L S+R++L + A ++L MD T +L+ +L + Sbjct: 581 RLVAKGCSQKFGVDYFETFSPVCRLESVRLILALAAEMQLYLHHMDVCTAYLNSELKDTV 640 Query: 4419 YMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKK 4240 YM+QP+GF V L +++YGLKQ+ R+W K D + F +PC Y + Sbjct: 641 YMKQPQGFTDAANPDQVLLLRKAIYGLKQSGREWNSKLDGVLKDLGFKACNHEPCLYQQS 700 Query: 4239 YTNSYVFLLLYLDDMLIEGSSMRENNNL 4156 + + +L+Y+DD+++ S + +L Sbjct: 701 GQGNLMLILVYVDDLILACQSREDMEDL 728 Score = 87.8 bits (214), Expect(3) = 2e-025 Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 1/130 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 HT QQNG ER ++ L+E+AR +L QS+L W E I T YL NR T+ L +K + Sbjct: 295 HTPQQNGVAERANRTLVEMARCMLLQSELGEALWAEAINTAVYLRNRSTSRALQSKTPME 354 Query: 65163 VLYNK*PAYSYLKVFGCLCFP-TLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 K PA S+L+VFG + HK KFE + + +GY GY++ D + + Sbjct: 355 EWTGKIPAVSHLRVFGAIAVALDKGVHKGKFESKGKEYRMIGYSIAAKGYRLFDKEKRCV 414 Query: 65340 HVSRDVSFYEN 65372 +DV F E+ Sbjct: 415 IEKQDVLFDES 425 Score = 86.2 bits (210), Expect = 6e-014 Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 2/226 (0%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSI--DK 88393 K QW +DS + HM ++++F EE ++D ++ + Sbjct: 10 KTQWCLDSGATSHMCCDRSVFTEFEEHTEKISLAGNGFLLAKGIGTVKLKTDLCTLVLNN 69 Query: 88392 VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 V +V L N +S+S+ + V F +VI + L ++ + +++ Sbjct: 70 VLFVPDLNGNFMSVSRAAQYKCFVNFGPHYADVIQEGERILRVMRAGNLYMFQ------- 122 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 K C + ++ D LWHKR H + L +++ K +V G+ K FK D VC+ C L K Sbjct: 123 GKHNSCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDAVCKTCMLAKI 182 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 F + L++IH DLCGP S Y +DD +R Sbjct: 183 HVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFLTFIDDKSR 230 Score = 67.1 bits (161), Expect(2) = 4e-019 Identities = 45/126 (35%), Positives = 70/126 (54%), Gaps = 3/126 (2%) Frame = -3 Query: 87857 KYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIG-STVEQKLYRGMIGSLLYL-TASRPD 87684 +Y+KELL+ + ++ + TP+ ++ G V+ Y+ IG L++L +RPD Sbjct: 767 QYIKELLRDYGSENCRPATTPLDAGHQVLCAGEQCQKVDAGQYQSTIGELMWLGLTTRPD 826 Query: 87683 IVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLK-GSNFDLVGYADVDYVGY 87507 ++ SV A+ +P H+ AVK IL YL T D+ + Y K G F G+ D D+ G Sbjct: 827 MLHSVAKLAQRNQDPHSEHMVAVKHILRYLASTVDVKLHYQKCGQAF--TGFVDADWGGD 884 Query: 87506 LVDRKSTTG 87480 +DRKS TG Sbjct: 885 RLDRKSYTG 893 Score = 57.0 bits (135), Expect(2) = 4e-019 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF---GLKIEQVPIFC 87301 FL +S S+KQ SVALS+ EAEY+A C + + +++ + + LK V Sbjct: 897 FLSGGPVSWRSEKQQSVALSSTEAEYMALTTACKEAIALRRLIVEIVCGDLKTPTVMHGD 956 Query: 87300 DNTSAINIVKNLVQHKRTKHVDIRHH 87223 + A + KN V H RTKH+DIR+H Sbjct: 957 NLKCAAQLAKNPVHHSRTKHIDIRYH 982 Score = 54.3 bits (128), Expect(3) = 2e-025 Identities = 35/111 (31%), Positives = 51/111 (45%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C C+ +I+ FP + + D++ DL P+ + G KYFL +DD SR Sbjct: 174 CKTCML-AKIHVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFLTFIDDKSRRI 232 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLK 64950 + L K F LV Q IK IR+ NG EF+++ + YLK Sbjct: 233 FVYFLRKKDEVFTKFVEFKKLVERQTGRKIKCIRSDNGGEFVNNVFDDYLK 283 Score = 48.8 bits (114), Expect(3) = e-101 Identities = 32/104 (30%), Positives = 51/104 (48%), Gaps = 1/104 (0%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPL-A 3975 ++S +FE D GP LGM++ RD + L YI+++L + + +P TTPL A Sbjct: 731 KISESFECTDKGPLHLFLGMEVQRDGDLGEITLGHSQYIKELLRDYGSENCRPATTPLDA 790 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 H L + + V+ Y I L+ + + TRPD L+ Sbjct: 791 GHQVLCAGEQCQKVDAGQ------YQSTIGELMWLGLTTRPDMLH 829 Score = 23.5 bits (49), Expect(3) = 2e-025 Identities = 14/46 (30%), Positives = 24/46 (51%), Gaps = 7/46 (15%) Frame = +2 Query: 64496 SCMSHGNSTDYLWHNRLGHVS------FIKMKGISSIH-ISFSPKKHFVCTVC 64633 SC + ++ LWH R GH++ ++ K + + + F P VC C Sbjct: 127 SCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDA--VCKTC 177 >dbj|BAA90795.1| (AP001168) Similar to 22 kDa kafirin cluster; Ty3-Gypsy type (AF061282) [Oryza sativa] Length = 963 Score = 280 bits (708), Expect(2) = 4e-097 Identities = 141/324 (43%), Positives = 209/324 (63%) Frame = -1 Query: 38482 RCVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPT 38303 R +A + + +L D+ R Q D + ++ + G D G + RI VP Sbjct: 466 RGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPD 525 Query: 38302 VGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEH 38123 D IL EAH+ YSIH G+ KMY+DLR+ + W+ M+ +IA++V+ C Q+VK EH Sbjct: 526 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLRERFWWASMKREIAEYVAVCDVCQRVKAEH 585 Query: 38122 LRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSV 37943 + G + L I EWKW+ I MDF+ GLP+TS G DSI+VIVD+LTK AHF+PV++ +S Sbjct: 586 QKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSG 645 Query: 37942 VRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSE 37763 RLA +Y+ +V HGVP I+SDRGSQFTS F Q+E+G++++ S A+HPQTD Q+E Sbjct: 646 SRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTE 705 Query: 37762 HTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWF 37583 Q+LEDML C L+FGG D+ P A+F+YN+ + +++QM + ALYGR CR+ + W Sbjct: 706 RVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWD 765 Query: 37582 ESMDPRPRGTDLIQGALEQVRVFK 37511 ++ + + GTD+++ A E+V+V + Sbjct: 766 QTGERQVFGTDILREAEEKVKVIQ 789 Score = 206 bits (519), Expect = 4e-050 Identities = 106/238 (44%), Positives = 148/238 (61%), Gaps = 1/238 (0%) Frame = +1 Query: 69259 GSYMCSSD-RDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFE 69435 G +C D +DL ++E + YSIHP +TK L + ++ + + Sbjct: 518 GERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLRERFWWASMKREIAEYVAVCDV 577 Query: 69436 LSASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFV 69615 +A K IPEWK E I +D + L RT D IWVIV+RLTK AHF+ Sbjct: 578 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 637 Query: 69616 PVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFH 69795 PV+TTY+ +LA++Y+ IV LHGV I+SDRG++F S+FW + +E+G++++ ST +H Sbjct: 638 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 697 Query: 69796 PQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 PQTD Q+E + Q+LEDML AC +DFG WD+ LP EF+YNNSY S +MAP+EALYGR Sbjct: 698 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 756 Score = 104 bits (258), Expect(2) = 4e-097 Identities = 52/121 (42%), Positives = 81/121 (65%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEI 37338 IQ+RLR+ QSRH+SYAD R L F D ++L V+P++GV RF GKL+PR++GP++I Sbjct: 788 IQERLRVAQSRHKSYADNRHRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKI 847 Query: 37337 LRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVI 37158 GEVAY+L+LP + + +H VF VS + + + + + +E+ + LT+VE+ + I Sbjct: 848 ASRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRI 907 Query: 37157 L 37155 L Sbjct: 908 L 908 Score = 103 bits (254), Expect = 4e-019 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 2/98 (2%) Frame = +3 Query: 57870 RRGKEA--VIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHF 58043 RRGK + DE+G + + ER+CVP DL IL EAH + YSIHPG+TKMY DL++ F Sbjct: 500 RRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLRERF 559 Query: 58044 LWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 W+ M+ +I ++VA C CQ+VK EHQ+P G L+ + E Sbjct: 560 WWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPE 599 Score = 60.9 bits (145), Expect = 3e-006 Identities = 35/118 (29%), Positives = 56/118 (46%), Gaps = 1/118 (0%) Frame = -3 Query: 40718 FQRLAPSIFSGAIGE-DAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWRTY*E 40542 F R+ P +FS +A ++ ++L L D F +HQ GPA +WW + Sbjct: 63 FLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRL 122 Query: 40541 SRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFSRHA 40365 +R P I+W +F+ AF +P V F L GS +++EY F+ +R+A Sbjct: 123 NRTTAEP-ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYA 180 >dbj|BAA24920.1| (AB011023) transposase [Burkholderia glumae] Length = 401 Score = 355 bits (902), Expect = 5e-095 Identities = 176/288 (61%), Positives = 212/288 (73%), Gaps = 1/288 (0%) Frame = +1 Query: 20353 KKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHH 20532 KK+DSA A++A G V LV L VSR+ + R W DGR+ R T D V+ I Sbjct: 107 KKMDSALAIVAGGQPVKLVCEVLGVSRSNVSARRSREATWRDGRQPRSTHDAPVVEAIER 166 Query: 20533 VIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTG 20712 VI +LP+YGYRRVW LRR+ G +NAKR+YR+MR + LL++R+ A +R H G Sbjct: 167 VISDLPSYGYRRVWGTLRRERIAAGQAPLNAKRIYRVMRTHGLLMQRRAAPVRPQRRHDG 226 Query: 20713 RVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLG 20892 +VAV+ SNQRWCSDGFEF CDNGE LRVTFALDCCDREA+ WA TT G + + V+DVML Sbjct: 227 KVAVERSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWAATTAGHSGDIVRDVMLA 286 Query: 20893 AVERRFGNDL-PSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFV 21069 AVE RFG+ L S +EWL+DNGS Y A ETRQFA +LGL+P T V SP+SNG+AESFV Sbjct: 287 AVESRFGDVLHTESEIEWLSDNGSGYTAEETRQFAALLGLKPLTTPVCSPQSNGMAESFV 346 Query: 21070 KTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLR 21216 KT+KRDY++IMPKPD TAA+NLA AFEHYNE HPHSAL YRSPRE+ R Sbjct: 347 KTMKRDYVAIMPKPDAATAARNLAIAFEHYNEKHPHSALKYRSPREFRR 395 Score = 160 bits (401), Expect = 3e-036 Identities = 80/117 (68%), Positives = 102/117 (86%), Gaps = 1/117 (0%) Frame = +2 Query: 20039 IDVL-GPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 +DVL GPE+RRR T ++K+A+V++SFEPG +VS+VARQHGV +QLF WRK YQ+GSL+A Sbjct: 1 MDVLTGPERRRRWTAEQKLAMVRESFEPGKSVSMVARQHGVNPNQLFHWRKLYQDGSLSA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPG 20389 V AGE+VVPASELA A+KQI+ELQR+LGKKTMENE+L+EAVEYGRAKK + ++ G Sbjct: 61 VKAGEEVVPASELADALKQIRELQRMLGKKTMENEILREAVEYGRAKKMDSALAIVAG 118 >gb|AAC28238.1| (AF076274) contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 19.54) and CCHC-type zinc fingers (Pfam: zf-CCHC.hmm, score: 12.35) [Arabidopsis thaliana] Length = 1104 Score = 179 bits (450), Expect(3) = 3e-093 Identities = 124/413 (30%), Positives = 191/413 (46%), Gaps = 2/413 (0%) Frame = -3 Query: 6173 VYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKG 5994 + L D+ +E G G + + T R L +VRY+P +++NLIS G S GY G+G Sbjct: 261 ILLGDDHTVESRGCGTIKLNTHGGLIRMLKNVRYVPNLRRNLISTGTLHSLGYKHEGGEG 320 Query: 5993 SWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGM-KMLVA 5817 + K G LY G V E+ + SAK K+L+ Sbjct: 321 KLRFYKNGKTALCGYLMNGLYILDG---HTVATETCNAE----------SAKNSTKLLIE 367 Query: 5816 KGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGS 5640 K + D+ CE VMGK K++SF + + +L H D+WG P+ S+ G Sbjct: 368 KKEFK-----DLDFCEHYVMGKSKKLSFN-VGKHVTEDILGYVHADLWGSPNVTPSISGK 421 Query: 5639 RFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*F 5460 +++++ I D SRKVW+ FLK + F F +WK VEN KVK LR+DNG E+ + F Sbjct: 422 QYFLSIIDDKSRKVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRF 481 Query: 5459 TAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYL 5280 +CA GI R +QNG+ +RMN+ + E RS Sbjct: 482 NDYCAKTGIERHRTCTYTPQQNGVTKRMNRTIMEKVRS---------------------- 519 Query: 5279 INRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYG 5100 P+ + + E++W+ +E Y HLR F YVH +++ KL + +K +GY Sbjct: 520 ----PASAVDHNVPEQLWLNREPGYKHLRRFSSIAYVH---QEQGKLKPRVLKGVFLGYP 572 Query: 5099 SNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKVLEITKQVGVEVELEKSNP 4935 GY+ W K + +V F+E ++KD + + + V E ++E P Sbjct: 573 QGTKGYKVWLIDEEKCVISRNVVFNEDSVFKDLQSGSKDEDETVTQESQIEIETP 627 Score = 142 bits (354), Expect(3) = 3e-093 Identities = 88/234 (37%), Positives = 132/234 (55%), Gaps = 14/234 (5%) Frame = -2 Query: 4929 VEADTQPTPTEESEEVTREQV--------LRRSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 +E +T P +SE T+ QV L S + ++ +L ++ EP Sbjct: 622 IEIETPP----KSELETQNQVQGGATQVQLNDSEDEYNDVEGFAFALVMAEEVESEEPVC 677 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR-- 4600 F + + +D KW M +EM SL KN TW + D P ++ + W+++ K G Sbjct: 678 FHDVKEDKDWEKWHGGMIEEMDSLLKNATWDIVDKPKNQKVISCHWLYKKKLGIPGVELP 737 Query: 4599 RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDL 4432 R+KA LV +G + DY E+FSPVVK TSIRILL ++ E+M LEQMD KT FLHG+L Sbjct: 738 RYKARLVARGFSHREGIDYQEVFSPVVKHTSIRILLSLMVKEDMELEQMDVKTAFLHGEL 797 Query: 4431 DKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCC 4252 D+ ++M+QP+GF +APRQW K+F++FM +F ++ D C Sbjct: 798 DQTLFMEQPEGF--------------------EAPRQWNKRFNAFMMDQKFSRSVSDSCV 837 Query: 4251 YFKKYTNS 4228 Y K+ +N+ Sbjct: 838 YVKEVSNA 845 Score = 71.8 bits (173), Expect(3) = 3e-093 Identities = 42/91 (46%), Positives = 57/91 (62%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKD+G A + LG+ I R+RS TL LSQ Y+E+V+ +FR++ AK TP+ H Sbjct: 858 LSREFEMKDMGAASRKLGIDIIRNRSEGTLCLSQTSYLERVIQKFRMDGAKVVNTPIGAH 917 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLV 3876 FKLS S +ER VPY+ + SL+ Sbjct: 918 FKLS---SVHNDDERVGSEKVPYSSVVGSLM 945 Score = 61.7 bits (147), Expect(2) = 1e-011 Identities = 47/140 (33%), Positives = 70/140 (49%), Gaps = 6/140 (4%) Frame = -3 Query: 87899 IILGTPRGTW-IHQQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQK 87738 II GT + Q Y++ ++++F+MD AK ++TPI KL D E +GS E+ Sbjct: 878 IIRNRSEGTLCLSQTSYLERVIQKFRMDGAKVVNTPIGAHFKLSSVHNDDERVGS--EKV 935 Query: 87737 LYRGMIGSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLK 87558 Y ++GSL+ F + E H AVK +L YLK + L + Y K Sbjct: 936 PYSSVVGSLM------------------FMSKQGEVHWTAVKWLLRYLKWSIGLNLMYTK 977 Query: 87557 GSNFDLVGYADVDYVGYLVDRKSTTG 87480 G +F + GY D D+ L S +G Sbjct: 978 GFDFKVQGYCDSDHAADLDKNMSISG 1003 Score = 56.2 bits (133), Expect(2) = 1e-014 Identities = 35/113 (30%), Positives = 53/113 (45%), Gaps = 1/113 (0%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIVDDFSR 64791 FC H + G+ + F + + + + DLW P + +G +YFL I+DD SR Sbjct: 376 FCEHYVM-GKSKKLSFNVGKHVTED-ILGYVHADLWGSPNVTPSISGKQYFLSIIDDKSR 433 Query: 64792 STWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 W L K T + +V N +K++RT NGLEF ++ N Y K Sbjct: 434 KVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRFNDYCAK 487 Score = 52.7 bits (124), Expect(2) = 1e-014 Identities = 38/130 (29%), Positives = 62/130 (47%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG +R ++ ++E R+ PA ++V HN Q Sbjct: 498 YTPQQNGVTKRMNRTIMEKVRS-------PA------------------SAVDHNVPE-Q 531 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + N+ P Y +L+ F + + ++ + K +PR +FLGYP T GYKV +K Sbjct: 532 LWLNREPGYKHLRRFSSIAY--VHQEQGKLKPRVLKGVFLGYPQGTKGYKVWLIDEEKCV 589 Query: 65343 VSRDVSFYEN 65372 +SR+V F E+ Sbjct: 590 ISRNVVFNED 599 Score = 37.1 bits (84), Expect(2) = 1e-011 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPI 87307 +G ++S S Q VALST EAEY+A + +WI+ L D L E + Sbjct: 1008 VGGNIVSWKSCLQPVVALSTTEAEYIALTKAVKEAMWIRNLLDDMMLGTETAEV 1061 >emb|CAB77896.1| (AL161499) putative transposon protein [Arabidopsis thaliana] Length = 1104 Score = 179 bits (450), Expect(3) = 3e-093 Identities = 124/413 (30%), Positives = 191/413 (46%), Gaps = 2/413 (0%) Frame = -3 Query: 6173 VYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKG 5994 + L D+ +E G G + + T R L +VRY+P +++NLIS G S GY G+G Sbjct: 261 ILLGDDHTVESRGCGTIKLNTHGGLIRMLKNVRYVPNLRRNLISTGTLHSLGYKHEGGEG 320 Query: 5993 SWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGM-KMLVA 5817 + K G LY G V E+ + SAK K+L+ Sbjct: 321 KLRFYKNGKTALCGYLMNGLYILDG---HTVATETCNAE----------SAKNSTKLLIE 367 Query: 5816 KGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGS 5640 K + D+ CE VMGK K++SF + + +L H D+WG P+ S+ G Sbjct: 368 KKEFK-----DLDFCEHYVMGKSKKLSFN-VGKHVTEDILGYVHADLWGSPNVTPSISGK 421 Query: 5639 RFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*F 5460 +++++ I D SRKVW+ FLK + F F +WK VEN KVK LR+DNG E+ + F Sbjct: 422 QYFLSIIDDKSRKVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRF 481 Query: 5459 TAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYL 5280 +CA GI R +QNG+ +RMN+ + E RS Sbjct: 482 NDYCAKTGIERHRTCTYTPQQNGVTKRMNRTIMEKVRS---------------------- 519 Query: 5279 INRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYG 5100 P+ + + E++W+ +E Y HLR F YVH +++ KL + +K +GY Sbjct: 520 ----PASAVDHNVPEQLWLNREPGYKHLRRFSSIAYVH---QEQGKLKPRVLKGVFLGYP 572 Query: 5099 SNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKVLEITKQVGVEVELEKSNP 4935 GY+ W K + +V F+E ++KD + + + V E ++E P Sbjct: 573 QGTKGYKVWLIDEEKCVISRNVVFNEDSVFKDLQSGSKDEDETVTQESQIEIETP 627 Score = 142 bits (354), Expect(3) = 3e-093 Identities = 88/234 (37%), Positives = 132/234 (55%), Gaps = 14/234 (5%) Frame = -2 Query: 4929 VEADTQPTPTEESEEVTREQV--------LRRSSRTIRAPDRYSHSLHYLLLIDEGEPES 4774 +E +T P +SE T+ QV L S + ++ +L ++ EP Sbjct: 622 IEIETPP----KSELETQNQVQGGATQVQLNDSEDEYNDVEGFAFALVMAEEVESEEPVC 677 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR-- 4600 F + + +D KW M +EM SL KN TW + D P ++ + W+++ K G Sbjct: 678 FHDVKEDKDWEKWHGGMIEEMDSLLKNATWDIVDKPKNQKVISCHWLYKKKLGIPGVELP 737 Query: 4599 RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDL 4432 R+KA LV +G + DY E+FSPVVK TSIRILL ++ E+M LEQMD KT FLHG+L Sbjct: 738 RYKARLVARGFSHREGIDYQEVFSPVVKHTSIRILLSLMVKEDMELEQMDVKTAFLHGEL 797 Query: 4431 DKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCC 4252 D+ ++M+QP+GF +APRQW K+F++FM +F ++ D C Sbjct: 798 DQTLFMEQPEGF--------------------EAPRQWNKRFNAFMMDQKFSRSVSDSCV 837 Query: 4251 YFKKYTNS 4228 Y K+ +N+ Sbjct: 838 YVKEVSNA 845 Score = 71.8 bits (173), Expect(3) = 3e-093 Identities = 42/91 (46%), Positives = 57/91 (62%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKD+G A + LG+ I R+RS TL LSQ Y+E+V+ +FR++ AK TP+ H Sbjct: 858 LSREFEMKDMGAASRKLGIDIIRNRSEGTLCLSQTSYLERVIQKFRMDGAKVVNTPIGAH 917 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLV 3876 FKLS S +ER VPY+ + SL+ Sbjct: 918 FKLS---SVHNDDERVGSEKVPYSSVVGSLM 945 Score = 61.7 bits (147), Expect(2) = 1e-011 Identities = 47/140 (33%), Positives = 70/140 (49%), Gaps = 6/140 (4%) Frame = -3 Query: 87899 IILGTPRGTW-IHQQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQK 87738 II GT + Q Y++ ++++F+MD AK ++TPI KL D E +GS E+ Sbjct: 878 IIRNRSEGTLCLSQTSYLERVIQKFRMDGAKVVNTPIGAHFKLSSVHNDDERVGS--EKV 935 Query: 87737 LYRGMIGSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLK 87558 Y ++GSL+ F + E H AVK +L YLK + L + Y K Sbjct: 936 PYSSVVGSLM------------------FMSKQGEVHWTAVKWLLRYLKWSIGLNLMYTK 977 Query: 87557 GSNFDLVGYADVDYVGYLVDRKSTTG 87480 G +F + GY D D+ L S +G Sbjct: 978 GFDFKVQGYCDSDHAADLDKNMSISG 1003 Score = 56.2 bits (133), Expect(2) = 1e-014 Identities = 35/113 (30%), Positives = 53/113 (45%), Gaps = 1/113 (0%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIVDDFSR 64791 FC H + G+ + F + + + + DLW P + +G +YFL I+DD SR Sbjct: 376 FCEHYVM-GKSKKLSFNVGKHVTED-ILGYVHADLWGSPNVTPSISGKQYFLSIIDDKSR 433 Query: 64792 STWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 W L K T + +V N +K++RT NGLEF ++ N Y K Sbjct: 434 KVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRFNDYCAK 487 Score = 52.7 bits (124), Expect(2) = 1e-014 Identities = 38/130 (29%), Positives = 62/130 (47%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG +R ++ ++E R+ PA ++V HN Q Sbjct: 498 YTPQQNGVTKRMNRTIMEKVRS-------PA------------------SAVDHNVPE-Q 531 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + N+ P Y +L+ F + + ++ + K +PR +FLGYP T GYKV +K Sbjct: 532 LWLNREPGYKHLRRFSSIAY--VHQEQGKLKPRVLKGVFLGYPQGTKGYKVWLIDEEKCV 589 Query: 65343 VSRDVSFYEN 65372 +SR+V F E+ Sbjct: 590 ISRNVVFNED 599 Score = 37.1 bits (84), Expect(2) = 1e-011 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPI 87307 +G ++S S Q VALST EAEY+A + +WI+ L D L E + Sbjct: 1008 VGGNIVSWKSCLQPVVALSTTEAEYIALTKAVKEAMWIRNLLDDMMLGTETAEV 1061 >gb|AAD13304.1| (AF119040) polyprotein [Lycopersicon esculentum] Length = 1542 Score = 295 bits (747), Expect(2) = 2e-091 Identities = 200/619 (32%), Positives = 303/619 (48%), Gaps = 9/619 (1%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHN--LIHLLSSSWMTYW----LYLWSWSEHELYL 39305 YEFL+M GLT P ++ C+ N L L + Y +Y + EH +L Sbjct: 729 YEFLVMPFGLTNA-PATF-----CNLMNNVLFDYLDDFVVVYLDDIVIYSRTLEEHVNHL 782 Query: 39304 RIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEV 39125 +VL LR LY K KCEF + + F GH+VSK +R+DP K++AI W P V ++ Sbjct: 783 SLVLSQLRKYTLYVKMEKCEFAQQEIKFLGHLVSKNQVRMDPKKVQAIVDWQAPRHVKDL 842 Query: 39124 HSFVGLVSYYRRFVEGFS---TSATHLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLL 38954 SF+GL +YYR+F+ G+S S T L +D ++W +C+ +F LK I S PIL L Sbjct: 843 RSFLGLANYYRKFIAGYSKKAASLTDLLKKDAKWVWSEQCEKAFQNLKNAIASEPILKLP 902 Query: 38953 VEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWR 38774 F ++ DAS + VL+++G + + SR+L E Y T + E+ +V L +WR Sbjct: 903 DFELPFEVHTDASDKAIGGVLVQEGHPVAFESRKLNDAEQRYSTHEKEMVAVVHCLQVWR 962 Query: 38773 HYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSR 38594 YL G ++ TD+++ Q+ L+ + RW E L +YD + PGK N VA +LSR Sbjct: 963 VYLLGTRFVVRTDNVANTFFKTQKKLSPKQARWQEFLAEYDFMWEHKPGKHNQVADALSR 1022 Query: 38593 KQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFE 38414 K+ VY + +++ YDR R Sbjct: 1023 KEVFVAVY---------------------------------SISKLETDFYDRIRLCAAN 1049 Query: 38413 D*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGT 38234 D + QV G + ++ D + GRI VP G + ++ EA++ ++ H G Sbjct: 1050 DSLYVKWMGQVQDGTMRRYWIEDDLLYFKGGRIVVPNQGGLRKDLMKEAYDSAWAGHPGV 1109 Query: 38233 AKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMD 38054 +M L + Y W M DI +V C Q K E + G + L I E W ++MD Sbjct: 1110 ERMLALLSRVYFWPKMEDDIEAYVKTCHVCQVDKTERKKEAGLLQPLPIPERPWLSVSMD 1169 Query: 38053 FVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIIS 37874 F++G P+ G SI V+VD+ +K + F+ L S A ++ V+++ GVP I+S Sbjct: 1170 FISGFPKVD-GKASIMVVVDRFSKYSVFIAAPELCSSEVAAELFYKHVIKYFGVPADIVS 1228 Query: 37873 DRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQ 37694 DR ++FT F T + +GT + S A HPQTD Q+E +LE+ L V + Sbjct: 1229 DRDTRFTGRFWTALFNMMGTELKFSTANHPQTDGQTERINHLLEEYLRHYVTASQRNWVE 1288 Query: 37693 FSPLAQFAYNSIFHSNIQMVLFVALYGR 37610 AQF YN S +M F + G+ Sbjct: 1289 LLDTAQFCYNLHKSSATEMSPFEIVLGK 1316 Score = 268 bits (677), Expect(2) = 1e-087 Identities = 132/271 (48%), Positives = 179/271 (65%) Frame = +2 Query: 56435 PYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTL 56614 PYRMAP EL EL+ QL ELL G I+PS AP+GA VLF KK+D + RMC++YR LNK T+ Sbjct: 617 PYRMAPKELVELRKQLNELLDAGLIQPSKAPYGAPVLFQKKQDGTMRMCVDYRALNKATI 676 Query: 56615 KNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSF 56794 KNKY +P + D D + AC F+K+DL +GY Q++I + PKT TR G YEFLV F Sbjct: 677 KNKYSVPLVQDLMDRLSKACWFTKLDLRAGYWQVRIAEGDEPKTTCVTRYGSYEFLVMPF 736 Query: 56795 GLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYA 56974 GL NAPA F LMN + YL+ FV+V++DDI+IYS++ + LY Sbjct: 737 GLTNAPATFCNLMNNVLFDYLDDFVVVYLDDIVIYSRTLEEHVNHLSLVLSQLRKYTLYV 796 Query: 56975 KFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI 57154 K KCEF + FLGH+VSK+ V +D K++A+ W P +V D+ SF+GLA+YYR+FI Sbjct: 797 KMEKCEFAQQEIKFLGHLVSKNQVRMDPKKVQAIVDWQAPRHVKDLRSFLGLANYYRKFI 856 Query: 57155 *VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 +S A LT+L K++ ++WS +CE++FQ Sbjct: 857 AGYSKKAASLTDLLKKDAKWVWSEQCEKAFQ 887 Score = 121 bits (301), Expect = 1e-024 Identities = 110/380 (28%), Positives = 172/380 (44%), Gaps = 12/380 (3%) Frame = +2 Query: 68354 QSVRF--GLVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXX 68527 Q ++F LVSK + +DPKK++ I DW P V + SFLGLA YYR+ + Y Sbjct: 806 QEIKFLGHLVSKNQVRMDPKKVQAIVDWQAPRHVKDLRSFLGLANYYRKFIAGYSKKAAS 865 Query: 68528 XXXXXXX*LS------CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGC 68689 C L K++ + +L+ ++ V + DAS +G Sbjct: 866 LTDLLKKDAKWVWSEQCEKAFQNL--KNAIASEPILKLPDFELPFEV--HTDASDKAIGG 921 Query: 68690 VLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQY 68869 VL+Q+G VA+ SR+L E++Y H+ E+V VV L++W YL G F V T++ + + Sbjct: 922 VLVQEGHPVAFESRKLNDAEQRYSTHEKEMVAVVHCLQVWRVYLLGTRFVVRTDNVANTF 981 Query: 68870 IFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSK--RP 69043 Q+ L ++ W E L +YD + PGK N VADALS K V +A+ +SK Sbjct: 982 FKTQKKLSPKQARWQEFLAEYDFMWEHKPGKHNQVADALSRKEV---FVAVYSISKLETD 1038 Query: 69044 LAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCK--IRDKVLKREA 69217 ++L + + LY+ W Q DG + + I D +L + Sbjct: 1039 FYDRIRLCAANDSLYVK-------------------WMGQVQDGTMRRYWIEDDLLYFKG 1079 Query: 69218 KAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRM 69397 ++ ++G LR D W G+ + L + Y +M Sbjct: 1080 GRIVVPNQGGLR------KDLMKEAYDSAWAGH--------PGVERMLALLSRVYFWPKM 1125 Query: 69398 KRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 + DI +V C CQ K E +K G+ +P Sbjct: 1126 EDDIEAYVKTCHVCQVDKTERKKEAGLLQPLP 1157 Score = 97.9 bits (240), Expect(2) = 5e-040 Identities = 51/117 (43%), Positives = 74/117 (62%), Gaps = 1/117 (0%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPD-VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLN 67870 ++ ++ +V P +LP +PP DID I++ GT PYR+ P EL E++ QL +LL+ Sbjct: 578 LLKQYADVMPPELPKKLPPRRDIDHKIELLPGTVAPAQAPYRMAPKELVELRKQLNELLD 637 Query: 67871 KVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGA 68044 I+ S + +GAP+LF K++D M MC+DYR LNK TI N Y +P + DL D L A Sbjct: 638 AGLIQPSKAPYGAPVLFQKKQDGTMRMCVDYRALNKATIKNKYSVPLVQDLMDRLSKA 695 Score = 96.3 bits (236), Expect(2) = 5e-040 Identities = 72/195 (36%), Positives = 99/195 (49%), Gaps = 12/195 (6%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+K+DLR+ Y Q+++ E D KT TRYG YEFLVM F LTNA ATF +LMN Y Sbjct: 698 FTKLDLRAGYWQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNNVLFDYL 757 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHGGSEK 68409 EEH +HL V L++ LY K KCE + Q G Sbjct: 758 DDFVVVYLDDIVIYSRTLEEHVNHLSLVLSQLRKYTLYVKMEKCE--FAQQEIKFLGHLV 815 Query: 68410 D*DN*RLD*TCF-------SYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVT 68553 + R+D + +K LR L+ Y + A++LT L K+ Sbjct: 816 SKNQVRMDPKKVQAIVDWQAPRHVKDLRSFLGLANYYRKFIAGYSKKAASLTDLLKKDAK 875 Query: 68554 FLWSDECEVSFQKLKT*LTTARILTLP 68634 ++WS++CE +FQ LK + + IL LP Sbjct: 876 WVWSEQCEKAFQNLKNAIASEPILKLP 902 Score = 95.6 bits (234), Expect = 1e-016 Identities = 59/223 (26%), Positives = 105/223 (46%) Frame = +1 Query: 69304 MEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFELSASEA*TPKAWRCDS 69483 M+E Y +++ HP + L+ L F E + + + K Sbjct: 1095 MKEAYDSAWAGHPGVERMLALLSRVYFWPKMEDDIEAYVKTCHVCQVDKTERKKEAGLLQ 1154 Query: 69484 EDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYI 69663 IPE +++D + + GK ++ V+V+R +K + F+ + + A+++ Sbjct: 1155 PLPIPERPWLSVSMDFISGFPKVDGKASIM-VVVDRFSKYSVFIAAPELCSSEVAAELFY 1213 Query: 69664 REIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLED 69843 + +++ GV I+SDR T+F FW ++ +GT + ST HPQTD Q+E I +LE+ Sbjct: 1214 KHVIKYFGVPADIVSDRDTRFTGRFWTALFNMMGTELKFSTANHPQTDGQTERINHLLEE 1273 Query: 69844 ML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 L V +W + L +F YN + EM+PFE + G+ Sbjct: 1274 YLRHYVTASQRNWVELLDTAQFCYNLHKSSATEMSPFEIVLGK 1316 Score = 85.4 bits (208), Expect(2) = 1e-087 Identities = 47/116 (40%), Positives = 67/116 (57%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F V+ D S +G VL+ E + + + SR+L E Y TH+ ++ AVV L+ WR YL G Sbjct: 908 FEVHTDASDKAIGGVLVQEGHPVAFESRKLNDAEQRYSTHEKEMVAVVHCLQVWRVYLLG 967 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 + V TD+ + + TQK L+ ++ RW E L + D + GK N VADALSRK Sbjct: 968 TRFVVRTDNVANTFFKTQKKLSPKQARWQEFLAEYDFMWEHKPGKHNQVADALSRK 1023 Score = 71.0 bits (171), Expect(2) = 2e-091 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Frame = -3 Query: 37514 QDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPM--KGVMRFGRWGKLSPRYIGPFE 37341 QD LR Q R + YAD R + FSV D++ L ++P K ++ R L P+Y GPFE Sbjct: 1351 QDSLRKAQQRMKKYADQHRRSVEFSVGDKVLLKLTPQIWKQIVSKTRHRGLIPKYDGPFE 1410 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDE 37230 +++ GEVAY L LP IHP F VS + Y DE Sbjct: 1411 VVKRVGEVAYRLKLPERLK-IHPTFHVSFLKPYFADE 1446 Score = 55.4 bits (131), Expect = 1e-004 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Frame = +3 Query: 57897 EEGILMIKE-RVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIV 58073 E+ +L K R+ VP L ++ EA+ S ++ HPG +M L + + W +M+ DI Sbjct: 1071 EDDLLYFKGGRIVVPNQGGLRKDLMKEAYDSAWAGHPGVERMLALLSRVYFWPKMEDDIE 1130 Query: 58074 DFVAQCPNCQQVKYEHQRPGGTLKRMPFLELD*LSI 58181 +V C CQ K E ++ G L+ +P E LS+ Sbjct: 1131 AYVKTCHVCQVDKTERKKEAGLLQPLPIPERPWLSV 1166 >gb|AAD32898.1|AC007289_5 (AC007289) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1307 Score = 173 bits (435), Expect(3) = 3e-091 Identities = 116/396 (29%), Positives = 190/396 (47%), Gaps = 6/396 (1%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H + + + F GKV D+ ++I+GKG + + T ++TL DV +IP +K Sbjct: 288 NHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTDVYFIPDLKS 347 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC 5874 N+IS+GQ G V + TL+ GC+ ++ + S + Sbjct: 348 NIISLGQATEAGCD----------------VRMKDDQLTLHDREGCL---LLRATRSRNR 388 Query: 5873 LWHNRLGHMSAKGMKM----LVAKGALEGLKSF--DMGLCESCVMGKQKRVSFTKTPREP 5712 L+ L + K +++ +V K + G+ + + C SC++GKQ R F K Sbjct: 389 LYKVDLNVENVKCLQLEAATMVRKELVIGISNIPKEKETCGSCLLGKQARQPFPKATTYR 448 Query: 5711 *KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEV 5532 +L++ H D+ GP S+ R+ + I D +R +W LK S+ F F+ +K +V Sbjct: 449 ASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKV 508 Query: 5531 ENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHA 5352 E +S +K+K R+D GGE+ F FCA +GI P +QNG+ ER N+ L Sbjct: 509 EQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMT 568 Query: 5351 RSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTY 5172 RS+ + MP W V Y+INR + L + EV+ +++ HLR FGC Y Sbjct: 569 RSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGY 628 Query: 5171 VHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILR 5046 ++ KL+ ++ +G YR D NRKI++ Sbjct: 629 AKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIK 670 Score = 167 bits (419), Expect(3) = 3e-091 Identities = 102/289 (35%), Positives = 161/289 (55%), Gaps = 12/289 (4%) Frame = -2 Query: 5007 GQRAEGSRDYKASGS*G*VGEE*PINVEADTQPTPTEESEEVTREQVLRRSSRTIRAPDR 4828 G+ +E S + + E+ I+ E +TQP+ T LRRS+R + P+ Sbjct: 709 GEESENSHEEEGENE---HNEQEQIDAE-ETQPS------HATPLPTLRRSTRQVGKPNY 758 Query: 4827 YSHSL-------HYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDL 4669 + +LL EP F EA ++++ W A +E+ S+EKN TW L DL Sbjct: 759 LDDYVLMAEIEGEQVLLAINDEPWDFKEANKLKE---WRDACKEEILSIEKNKTWSLIDL 815 Query: 4668 PAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILL 4504 P ++ + KWVF+IK DG ++KA LV KG DY E+F+ V ++ +IR+++ Sbjct: 816 PVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVII 875 Query: 4503 IIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPR 4324 + AS + +D KT FLHG+L +++Y+ QP+GF E V KL ++LYGLKQAPR Sbjct: 876 ALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPR 935 Query: 4323 QWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 W K + + + F K K+P Y ++ + + +Y+DD+L+ GSS LD ++ Sbjct: 936 AWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSS------LDLIL 989 Query: 4143 C 4141 C Sbjct: 990 C 990 Score = 95.2 bits (233), Expect(2) = 7e-037 Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 4/147 (2%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF-GLKIEQVPIFCDN 87295 +L C I+ S+KQ VALS+ EAE++AA Q +W++ ++ G E+V I DN Sbjct: 1157 YLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDN 1216 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SAI + KNLV H R+KH+ R+HF+R+ VE + ++ EQ ADI T L R F Sbjct: 1217 KSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKFR 1276 Query: 87114 RNRLELG---MMKINYELEAEGIGLSKSSLH 87031 R +G +++ +++L+ E +G+S S++ Sbjct: 1277 EMRELVGVQCVLEDDFKLKGEFVGISMKSIN 1307 Score = 88.5 bits (216), Expect(2) = 7e-037 Identities = 46/139 (33%), Positives = 77/139 (55%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 +L G + Q++Y ++++ M + + P+A +L + ++ YR MIG Sbjct: 1015 VLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIG 1074 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 L Y+ +RPD+ + VG+ +R+ P+ESH A+K++L YLKGT G++ +G LV Sbjct: 1075 CLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLV 1134 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 GY+D + L D KST G Sbjct: 1135 GYSDSSHSADLDDGKSTAG 1153 Score = 84.3 bits (205), Expect(2) = 5e-024 Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 8/162 (4%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VER+++ LL + R++L K+P WGE + +TY+INR+ L N+ ++ Sbjct: 549 YTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYE 608 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNS-HKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 V + P +L+VFGC+ + + H K + R+ ++LG + Y++LD + +KI Sbjct: 609 VFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKI 668 Query: 65340 -------HVSRDVSFYENVFPFTLFEVDFSFSTTLEKLSINQNILHSTNS 65468 +RD+S F TL E + + + +N S NS Sbjct: 669 IKWNNSDSETRDIS---GTFSLTLGEFGNNGIQESDDIETEKNGEESENS 715 Score = 81.9 bits (199), Expect = 1e-012 Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDK- 88393 S WY+D+ S HMTGN F L E + I K Sbjct: 276 SDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKT 335 Query: 88392 ---VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTS 88222 VY++ L N++S+ Q + V + + + + L+ + +Y VD + Sbjct: 336 LTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKVDLN 395 Query: 88221 TIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTL 88042 + + CL Q++ ++ K+LVIG+ N KE + C +C L Sbjct: 396 V---ENVKCL------------------QLEAATMVRKELVIGI-SNIPKEKETCGSCLL 433 Query: 88041 GK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 GK + F ++ LEL+H DLCGP+ + +K Y+ VL+DD+TR Sbjct: 434 GKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTR 484 Score = 61.3 bits (146), Expect = 2e-006 Identities = 33/146 (22%), Positives = 73/146 (49%), Gaps = 1/146 (0%) Frame = -1 Query: 90160 KNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFK 89981 KN A+ +L + ++ ++K +W+ ++ + G +V++ K+ +L +E++ Sbjct: 23 KNDMARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLN 82 Query: 89980 MKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIK-VTAIREAKDLT 89804 MK +++ + + R + + + SLG+ + V K L+ PR I + A+ + DL Sbjct: 83 MKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLN 142 Query: 89803 NMTLDELVRNLKTYEMNVDKRGEGNKE 89723 +++V +KTYE V + +E Sbjct: 143 TTGFEDIVGRMKTYEDRVCDEDDSPEE 169 Score = 56.2 bits (133), Expect(2) = 5e-024 Identities = 37/120 (30%), Positives = 57/120 (46%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 +K C CL Q FP T +++ +L+ DL P T +Y L+++DD Sbjct: 424 EKETCGSCLLGKQARQP-FPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDH 482 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKKRKN 64965 +R W+ LL KS + + F + V + V IK+ RT G EF+S E + K+ N Sbjct: 483 TRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGIN 542 Score = 45.7 bits (106), Expect(3) = 3e-091 Identities = 28/103 (27%), Positives = 50/103 (48%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM DLG LG+++ ++ + L QE Y K++ +++ P P+A Sbjct: 995 MAGKFEMSDLGQLTYYLGIEVLHRKNG--IILRQERYAMKIIEEAGMSNCNPVLIPMAAG 1052 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 +L K Q K + ER++ ++ + +V TRPD Y Sbjct: 1053 LELCKAQEEKCITERDYRRMI-------GCLRYIVHTRPDLSY 1088 >gb|AAG12877.1|AC069473_8 (AC069473) gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] Length = 1499 Score = 281 bits (712), Expect(4) = 3e-089 Identities = 185/579 (31%), Positives = 288/579 (48%), Gaps = 2/579 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EH +L+ V + +R +L+AK SKC F + V + GH +S +GI DP KI+A Sbjct: 759 VYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKA 818 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA--THLNLQDVSFMWLVKCDMSFLKLK 38990 + W +PT++ ++ F+GL YYRRFV F A H + +F W +F LK Sbjct: 819 VKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLK 878 Query: 38989 ELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLE 38810 + AP+L+L + F + DA G G+ VLM++G + Y+SR+LK +L+ + E Sbjct: 879 AALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKE 938 Query: 38809 LAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHP 38630 L ++FA+ WRHYL + TD SL+ ++ QR +W+ L ++D I Y Sbjct: 939 LLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQ 998 Query: 38629 GKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQS 38450 GK+N+VA +LSR + V++ + E L DIQ A S Sbjct: 999 GKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQ------------------AGYANDS 1040 Query: 38449 SLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSE 38270 L D Q RD D + +L+ +I VP + IL Sbjct: 1041 QLQDIITALQ---------RDP----DSKKYFSWSQNILRRKSKIVVPANDNIKNTILLW 1087 Query: 38269 AHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLS 38090 H H G ++ ++ + W GM DI ++ C QQ K + S G + L Sbjct: 1088 LHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLP 1147 Query: 38089 ISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEV 37910 I + W ++MDF+ GLP S G I V+VD+L+K+AHF+ + +S + +A Y+ V Sbjct: 1148 IPDTIWSEVSMDFIEGLP-VSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNV 1206 Query: 37909 VRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLH 37730 + HG P SI+SDR FTS F F G + L++A+HPQ+D Q+E + LE L Sbjct: 1207 FKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLR 1266 Query: 37729 VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRI 37607 + ++ LA++ YN+ +HS+ +M F +YG++ Sbjct: 1267 CMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQV 1307 Score = 239 bits (604), Expect(2) = 1e-081 Identities = 118/278 (42%), Positives = 177/278 (63%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 + P++ PYR + + E+ +++LL G ++ S++P+ + V+ VKKKD ++R+C++YR Sbjct: 599 SNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYR 658 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 +LN +T+K+ + IP I+D D + GA +FSKIDL +GY Q+++ ++ KTAF T GH+ Sbjct: 659 ELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHF 718 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E+LV FGL NAPA F GLMN IFKP+L FV+VF DDIL+YS S + Sbjct: 719 EYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVM 778 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 L+AK KC F + V +LGH +S G+ D +KI+AVK W +PT + + F+GLA Sbjct: 779 RANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLA 838 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYRRF+ F IA L LTK + F W+ +++F+ Sbjct: 839 GYYRRFVRSFGVIAGPLHALTKTDA-FEWTAVAQQAFE 875 Score = 121 bits (301), Expect = 1e-024 Identities = 80/229 (34%), Positives = 122/229 (52%), Gaps = 3/229 (1%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 +S + I DP KI+ +K+W +P ++ Q+ FLGLAGYYRR + S+ Sbjct: 804 ISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDA 863 Query: 68555 SCGLTSVRLVF---KSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAYA 68725 + F K++ +L + ++ ++ DA G+G VLMQ+G +AY Sbjct: 864 FEWTAVAQQAFEDLKAALCQAPVLSLPLFD--KQFVVETDACGQGIGAVLMQEGHPLAYI 921 Query: 68726 SRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKR 68905 SRQLK + I++ EL+ V+FA++ W +YL HF + T+ RSL+Y+ QR ++ Sbjct: 922 SRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQ 981 Query: 68906 IWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQ 69061 WL L ++D I Y GK NVVADALS S + V + L KD+Q Sbjct: 982 QWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQ 1033 Score = 109 bits (269), Expect = 8e-021 Identities = 58/160 (36%), Positives = 90/160 (56%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IP+ +++D + L + GK VI V+V+RL+K+AHF+ + Y+ +A Y+ + Sbjct: 1148 IPDTIWSEVSMDFIEGLPVSGGK-TVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNV 1206 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 +LHG SI+SDR F S FW G + L++ +HPQ+D Q+E + + LE L Sbjct: 1207 FKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLR 1266 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 D W ++L L E+ YN +YH S M PFE +YG+ Sbjct: 1267 CMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ 1306 Score = 108 bits (268), Expect = 1e-020 Identities = 80/209 (38%), Positives = 109/209 (51%), Gaps = 10/209 (4%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G FSKIDLR+ YHQ+++ +DI KTAF+T GH+E+LVM F LTNA ATF LMN Sbjct: 681 LGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNF 740 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRR 68388 F+ + EEH HL+ VF +++ KL+ K SKC + V+ Sbjct: 741 IFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYL 800 Query: 68389 YH----GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT* 68541 H G E D + + LK LR L+ Y F IA L LT Sbjct: 801 GHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALT- 859 Query: 68542 KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVV 68658 K F W+ + +F+ LK L A +L+LP+ + FVV Sbjct: 860 KTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVV 898 Score = 94.0 bits (230), Expect(2) = 1e-081 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F+V D G+GAVLM E + + Y SRQLK + + ++ +L AV+FA+++WRHYL Sbjct: 896 FVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQ 955 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + TD RSL Y+ Q+ +++W+ L + D I Y GK NVVADALSR GS Sbjct: 956 SHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSE 1015 Query: 57667 GSLAHSQVSRRPLAREVQT-LANDFMRLEVL 57756 V L +++Q AND +++ Sbjct: 1016 VLHMAMTVVECDLLKDIQAGYANDSQLQDII 1046 Score = 75.3 bits (182), Expect = 1e-010 Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 2/132 (1%) Frame = +2 Query: 67667 ETNMLESILVVSEFLEVF--PTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKE 67840 E +++E +L +E+ ++F PT LP P + I + G+ P+ PYR + + E Sbjct: 561 EESVVEEVL--NEYPDIFIEPTALP--PFREKHNHKIKLLEGSNPVNQRPYRYSIHQKNE 616 Query: 67841 MKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDD 68020 + ++DLL ++ S S + +P++ VK+KD +C+DYR+LN +T+ + +PIP I+D Sbjct: 617 IDKLVEDLLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIED 676 Query: 68021 LFD*LQGASVSPRL 68062 L D L GA + ++ Sbjct: 677 LMDELGGAVIFSKI 690 Score = 63.2 bits (151), Expect(4) = 3e-089 Identities = 42/111 (37%), Positives = 65/111 (57%), Gaps = 3/111 (2%) Frame = -3 Query: 37493 QSRHQSYADLRR*PLRFSVRDRLFLHVSPMKG---VMRFGRWGKLSPRYIGPFEILRIAG 37323 Q R + +AD R F + D +++ + P + VMR + KLSP+Y GP++I+ G Sbjct: 1346 QHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQ--KLSPKYFGPYKIIDRCG 1403 Query: 37322 EVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVV 37161 EVAY+L L P++S +HPVF VS + + + S +H +V + D V E VV Sbjct: 1404 EVAYKLAL-PSYSQVHPVFHVSQLKVLVGNVSTTVHLPSV-MQDVFEKVPEKVV 1455 Score = 50.0 bits (117), Expect = 0.005 Identities = 27/85 (31%), Positives = 40/85 (46%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDF 58079 + IL K ++ VP D++ +TIL H S H G + +K F W M DI + Sbjct: 1063 QNILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAY 1122 Query: 58080 VAQCPNCQQVKYEHQRPGGTLKRMP 58154 + C CQQ K + G L+ +P Sbjct: 1123 IRSCGTCQQCKSDPAASPGLLQPLP 1147 Score = 34.8 bits (78), Expect(4) = 3e-089 Identities = 18/41 (43%), Positives = 23/41 (55%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+ F LM +F+ L FV++F DDILV LE Sbjct: 725 FGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLE 765 Score = 21.6 bits (44), Expect(4) = 3e-089 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 Query: 37113 VKVCWKHH*VEKATLETEQEMQEQFP 37036 V V W + +E+AT E ++Q+ FP Sbjct: 1470 VLVKWSNEPLEEATWEFLFDLQKTFP 1495 >gb|AAD17356.1| (AF128395) contains similarity to retrovirus-related polyproteins [Arabidopsis thaliana] Length = 611 Score = 334 bits (848), Expect = 1e-088 Identities = 198/462 (42%), Positives = 269/462 (57%) Frame = -1 Query: 38890 MKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIM 38711 M++G I Y SR+LK HE NYPT DLE+A + +TDH SL+ I Sbjct: 1 MQRGKVIAYGSRQLKKHEGNYPTHDLEMAAV------------------FTDHKSLKYIF 42 Query: 38710 IQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALD 38531 Q +LN R RW++L+ DYDL I YHPGK N+V +LSRK+ V + L ++ Sbjct: 43 TQLELNLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKR----VGAAPGQSVETLVIE 98 Query: 38530 IQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATL 38351 I C V + V Q+ L R + Q +D L++ +G + Sbjct: 99 IGALRLCAVAREPLGLEAV-----DQTDLLSRVQLAQEKDEGLIAASK----AEGFEYQF 149 Query: 38350 DFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIA 38171 +G + GR+ VP + Q ILSEAH +SIH G KMYRDL+++Y W GM+ D+ Sbjct: 150 AANGTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVG 209 Query: 38170 DFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQ 37991 ++V C Q VK+EH SG + L I EWKWD ITMDFV GLP S+ D+I+VIVD+ Sbjct: 210 NWVEECDVCQLVKIEHQVSGSLLQSLPIPEWKWDFITMDFVVGLP-VSRTKDAIWVIVDR 268 Query: 37990 LTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTR 37811 LTKSAHFL ++ LA+ Y+ E+V+ HGVPVSI+SDR S+FTS F FQ E+GT+ Sbjct: 269 LTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTK 328 Query: 37810 VDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVL 37631 V +S A+HPQTD QSE TIQ LEDML +CVL++ G L +FAYN+ + ++I M Sbjct: 329 VQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVEFAYNNSYQASIGMAP 388 Query: 37630 FVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKID 37505 F LYGR CR+L W + + G D +Q E++RV K++ Sbjct: 389 FEVLYGRPCRTLC-WTQVGERSIYGADYVQEITERIRVLKLN 429 Score = 189 bits (474), Expect = 7e-045 Identities = 106/238 (44%), Positives = 139/238 (57%) Frame = +1 Query: 69259 GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFEL 69438 G D++L + + E ++ +SIHP ATK L+ + ++ + Sbjct: 159 GRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVGNWVEECDVC 218 Query: 69439 SASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVP 69618 + + IPEWK + I +D VV L + K D IWVIV+RLTKSAHF+ Sbjct: 219 QLVKIEHQVSGSLLQSLPIPEWKWDFITMDFVVGLPVSRTK-DAIWVIVDRLTKSAHFLA 277 Query: 69619 VQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHP 69798 ++ T LAK Y+ EIV+LHGV +SI+SDR +KF S FW + E+GT+V +ST +HP Sbjct: 278 IRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTKVQMSTAYHP 337 Query: 69799 QTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 QTD QSE IQ LEDML CV+D+ HW L LVEFAYNNSY S MAPFE LYGR Sbjct: 338 QTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVEFAYNNSYQASIGMAPFEVLYGR 395 Score = 132 bits (329), Expect = 7e-028 Identities = 96/266 (36%), Positives = 136/266 (51%), Gaps = 22/266 (8%) Frame = +2 Query: 68696 MQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIF 68875 MQ+GKV+AY SRQLK HE Y HDLE+ AVFT+H+SL+YIF Sbjct: 1 MQRGKVIAYGSRQLKKHEGNYPTHDLEMA------------------AVFTDHKSLKYIF 42 Query: 68876 NQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLK-------------AVSMGSL 69016 Q +L LR R W++L+ DYD+ I YHPGK NVV DALS K + +G+L Sbjct: 43 TQLELNLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKRVGAAPGQSVETLVIEIGAL 102 Query: 69017 AMLQVSKRPLAKD----VQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLC 69184 + V++ PL + LLS + +Q+ D+G + Sbjct: 103 RLCAVAREPLGLEAVDQTDLLSRVQL------------------------AQEKDEGLIA 138 Query: 69185 KIRDKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV---*VTLFI--QGL 69349 K E + G + + G +CVP+ D R+ I+ ++F G Sbjct: 139 -----ASKAEGFEYQFAANGTILVHGRVCVPK-----DKELRQEILSEAHASMFSIHPGA 188 Query: 69350 LNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +Y DLK++Y MKRD+ ++V C CQ VK EHQ G + +P Sbjct: 189 TKMYRDLKRYYQWVGMKRDVGNWVEECDVCQLVKIEHQVSGSLLQSLP 236 Score = 110 bits (273), Expect(2) = 3e-043 Identities = 64/131 (48%), Positives = 82/131 (61%), Gaps = 13/131 (9%) Frame = +1 Query: 57370 VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGVKCEVYTDHRSLPYVFTQKDL 57549 VI Y SRQLK HE NYPTHDL++AAV +TDH+SL Y+FTQ +L Sbjct: 6 VIAYGSRQLKKHEGNYPTHDLEMAAV------------------FTDHKSLKYIFTQLEL 47 Query: 57550 NLRRRRWMELLKDNDITILYHLGKANVVADALSRK-------------VGSMGSLAHSQV 57690 NLR RRWM+L+ D D+ I YH GKANVV DALSRK V +G+L V Sbjct: 48 NLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKRVGAAPGQSVETLVIEIGALRLCAV 107 Query: 57691 SRRPLAREVQTLANDFMRLEVLEK 57762 +R PL E + R+++ ++ Sbjct: 108 AREPLGLEAVDQTDLLSRVQLAQE 131 Score = 94.4 bits (231), Expect(2) = 3e-043 Identities = 44/96 (45%), Positives = 62/96 (63%) Frame = +3 Query: 57876 GKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSR 58055 G E G +++ RVCVP+ +L IL+EAH+S +SIHPGATKMY DLK+++ W Sbjct: 144 GFEYQFAANGTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVG 203 Query: 58056 MQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 M+ D+ ++V +C CQ VK EHQ G L+ +P E Sbjct: 204 MKRDVGNWVEECDVCQLVKIEHQVSGSLLQSLPIPE 239 Score = 47.3 bits (110), Expect = 0.034 Identities = 48/162 (29%), Positives = 70/162 (42%), Gaps = 7/162 (4%) Frame = -3 Query: 37523 ESIQDRLRI-------TQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLS 37365 + I +R+R+ Q+R +SYAD RR L F V D VS V R S Sbjct: 417 QEITERIRVLKLNMKEAQNRQRSYADKRRKELEFEVGDS----VSQDGHVAR-------S 465 Query: 37364 PRYIGPFEILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRL 37185 + +GP VA+ L+L A H VF VSM R + + VL +L + Sbjct: 466 EQRVGP---------VAFRLELSDVMRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNM 516 Query: 37184 TFVEELVVILARY*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 T V +L R + R+ L++ + + W P R K+ F Sbjct: 517 TLEARPVRVLERRIKELRRKKIPLIKVLRNCDGVTEETWEPEARLKARF 565 >emb|CAB77942.1| (AL161507) putative reverse transcriptase [Arabidopsis thaliana] Length = 611 Score = 334 bits (848), Expect = 1e-088 Identities = 198/462 (42%), Positives = 269/462 (57%) Frame = -1 Query: 38890 MKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIM 38711 M++G I Y SR+LK HE NYPT DLE+A + +TDH SL+ I Sbjct: 1 MQRGKVIAYGSRQLKKHEGNYPTHDLEMAAV------------------FTDHKSLKYIF 42 Query: 38710 IQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALD 38531 Q +LN R RW++L+ DYDL I YHPGK N+V +LSRK+ V + L ++ Sbjct: 43 TQLELNLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKR----VGAAPGQSVETLVIE 98 Query: 38530 IQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATL 38351 I C V + V Q+ L R + Q +D L++ +G + Sbjct: 99 IGALRLCAVAREPLGLEAV-----DQTDLLSRVQLAQEKDEGLIAASK----AEGFEYQF 149 Query: 38350 DFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIA 38171 +G + GR+ VP + Q ILSEAH +SIH G KMYRDL+++Y W GM+ D+ Sbjct: 150 AANGTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVG 209 Query: 38170 DFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQ 37991 ++V C Q VK+EH SG + L I EWKWD ITMDFV GLP S+ D+I+VIVD+ Sbjct: 210 NWVEECDVCQLVKIEHQVSGSLLQSLPIPEWKWDFITMDFVVGLP-VSRTKDAIWVIVDR 268 Query: 37990 LTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTR 37811 LTKSAHFL ++ LA+ Y+ E+V+ HGVPVSI+SDR S+FTS F FQ E+GT+ Sbjct: 269 LTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTK 328 Query: 37810 VDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVL 37631 V +S A+HPQTD QSE TIQ LEDML +CVL++ G L +FAYN+ + ++I M Sbjct: 329 VQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVEFAYNNSYQASIGMAP 388 Query: 37630 FVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKID 37505 F LYGR CR+L W + + G D +Q E++RV K++ Sbjct: 389 FEVLYGRPCRTLC-WTQVGERSIYGADYVQEITERIRVLKLN 429 Score = 189 bits (474), Expect = 7e-045 Identities = 106/238 (44%), Positives = 139/238 (57%) Frame = +1 Query: 69259 GSYMCSSDRDLTRLNMEEVYSLSYSIHPRATKYLS*LEAALFVLPYEKGHSRFCISMFEL 69438 G D++L + + E ++ +SIHP ATK L+ + ++ + Sbjct: 159 GRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVGNWVEECDVC 218 Query: 69439 SASEA*TPKAWRCDSEDTIPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVP 69618 + + IPEWK + I +D VV L + K D IWVIV+RLTKSAHF+ Sbjct: 219 QLVKIEHQVSGSLLQSLPIPEWKWDFITMDFVVGLPVSRTK-DAIWVIVDRLTKSAHFLA 277 Query: 69619 VQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHP 69798 ++ T LAK Y+ EIV+LHGV +SI+SDR +KF S FW + E+GT+V +ST +HP Sbjct: 278 IRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTKVQMSTAYHP 337 Query: 69799 QTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 QTD QSE IQ LEDML CV+D+ HW L LVEFAYNNSY S MAPFE LYGR Sbjct: 338 QTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVEFAYNNSYQASIGMAPFEVLYGR 395 Score = 132 bits (329), Expect = 7e-028 Identities = 96/266 (36%), Positives = 136/266 (51%), Gaps = 22/266 (8%) Frame = +2 Query: 68696 MQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIF 68875 MQ+GKV+AY SRQLK HE Y HDLE+ AVFT+H+SL+YIF Sbjct: 1 MQRGKVIAYGSRQLKKHEGNYPTHDLEMA------------------AVFTDHKSLKYIF 42 Query: 68876 NQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLK-------------AVSMGSL 69016 Q +L LR R W++L+ DYD+ I YHPGK NVV DALS K + +G+L Sbjct: 43 TQLELNLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKRVGAAPGQSVETLVIEIGAL 102 Query: 69017 AMLQVSKRPLAKD----VQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLC 69184 + V++ PL + LLS + +Q+ D+G + Sbjct: 103 RLCAVAREPLGLEAVDQTDLLSRVQL------------------------AQEKDEGLIA 138 Query: 69185 KIRDKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV---*VTLFI--QGL 69349 K E + G + + G +CVP+ D R+ I+ ++F G Sbjct: 139 -----ASKAEGFEYQFAANGTILVHGRVCVPK-----DKELRQEILSEAHASMFSIHPGA 188 Query: 69350 LNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +Y DLK++Y MKRD+ ++V C CQ VK EHQ G + +P Sbjct: 189 TKMYRDLKRYYQWVGMKRDVGNWVEECDVCQLVKIEHQVSGSLLQSLP 236 Score = 110 bits (273), Expect(2) = 3e-043 Identities = 64/131 (48%), Positives = 82/131 (61%), Gaps = 13/131 (9%) Frame = +1 Query: 57370 VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGVKCEVYTDHRSLPYVFTQKDL 57549 VI Y SRQLK HE NYPTHDL++AAV +TDH+SL Y+FTQ +L Sbjct: 6 VIAYGSRQLKKHEGNYPTHDLEMAAV------------------FTDHKSLKYIFTQLEL 47 Query: 57550 NLRRRRWMELLKDNDITILYHLGKANVVADALSRK-------------VGSMGSLAHSQV 57690 NLR RRWM+L+ D D+ I YH GKANVV DALSRK V +G+L V Sbjct: 48 NLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKRVGAAPGQSVETLVIEIGALRLCAV 107 Query: 57691 SRRPLAREVQTLANDFMRLEVLEK 57762 +R PL E + R+++ ++ Sbjct: 108 AREPLGLEAVDQTDLLSRVQLAQE 131 Score = 94.4 bits (231), Expect(2) = 3e-043 Identities = 44/96 (45%), Positives = 62/96 (63%) Frame = +3 Query: 57876 GKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSR 58055 G E G +++ RVCVP+ +L IL+EAH+S +SIHPGATKMY DLK+++ W Sbjct: 144 GFEYQFAANGTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVG 203 Query: 58056 MQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 M+ D+ ++V +C CQ VK EHQ G L+ +P E Sbjct: 204 MKRDVGNWVEECDVCQLVKIEHQVSGSLLQSLPIPE 239 Score = 47.3 bits (110), Expect = 0.034 Identities = 48/162 (29%), Positives = 70/162 (42%), Gaps = 7/162 (4%) Frame = -3 Query: 37523 ESIQDRLRI-------TQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLS 37365 + I +R+R+ Q+R +SYAD RR L F V D VS V R S Sbjct: 417 QEITERIRVLKLNMKEAQNRQRSYADKRRKELEFEVGDS----VSQDGHVAR-------S 465 Query: 37364 PRYIGPFEILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRL 37185 + +GP VA+ L+L A H VF VSM R + + VL +L + Sbjct: 466 EQRVGP---------VAFRLELSDVMRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNM 516 Query: 37184 TFVEELVVILARY*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 T V +L R + R+ L++ + + W P R K+ F Sbjct: 517 TLEARPVRVLERRIKELRRKKIPLIKVLRNCDGVTEETWEPEARLKARF 565 >gb|AAD19773.1| (AC006528) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1335 Score = 331 bits (839), Expect = 1e-087 Identities = 210/596 (35%), Positives = 319/596 (53%), Gaps = 23/596 (3%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 + +M EN + ++I++F IV+ LN + I+ DE++A++L+SSLP +D +V + S Sbjct: 98 YTFKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSN 157 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENLR 6432 EKL+ D DV+++ ++RE+ ++ + + R N ++ + + Sbjct: 158 SREKLRLD---DVMVAARDKERELSQNNRPVVEGHFARGRPDGKNNNQGNKGKNRSRSKS 214 Query: 6431 TDQT*LV*I--------------VEKNDTFGRAIQSQRRNRIKNLEM---TMIL*IQQRT 6303 D + I +E+N + + + + K+ E M+L T Sbjct: 215 ADGKRVCWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDET 274 Query: 6302 LGML*FLV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKG 6129 L +V ++ N W+L H +P K+ FK+FK + G V + ++ ++G G Sbjct: 275 L-----VVTDSIANE--WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIG 327 Query: 6128 DVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGT 5949 + I+ + +Q L DVRY+P + +NLIS+G + G G KIVKG + +G Sbjct: 328 SIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQ 387 Query: 5948 NSGTLYTTLGCIN---MDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG 5778 TLY G AE + LWH+RLGHMS KGM++LV KG L ++ Sbjct: 388 KRDTLYILDGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELE 447 Query: 5777 LCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRK 5601 CE CV GKQ RVSF K L H+D+WG P +SLG S+++++F+ D+SRK Sbjct: 448 FCEDCVYGKQHRVSFAPAQHVT-KEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRK 506 Query: 5600 VWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMR 5421 VW+YFL+ + F F +WK VENQS KVK+LR+DNG EY F FC +GI + Sbjct: 507 VWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHK 566 Query: 5420 AVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKI 5241 +QNGI ER+N+ + + RSM GM K FWA ST YLINR PS + F + Sbjct: 567 TCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDL 626 Query: 5240 LEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKN 5061 EE W S LR FGC Y+H D + KLN ++ K Y + GY+ W ++ Sbjct: 627 PEEKWTGALPDLSSLRKFGCLAYIHAD---QGKLNPRSKKGIFTSYPEGVKGYKVWVLED 683 Query: 5060 RKILRHCDVTFDESVMYKD 5004 +K + +V F E VM+KD Sbjct: 684 KKCVISRNVIFREQVMFKD 702 Score = 199 bits (500), Expect(2) = 1e-072 Identities = 118/261 (45%), Positives = 164/261 (62%), Gaps = 13/261 (4%) Frame = -2 Query: 4926 EADTQPTPTEESEEVTREQVLR-RSSRTIRAPDRYSHS-----LHYLLLIDEGEPESFDE 4765 + +++ ++ E+++ Q++R R RTI+A +Y+ S +Y + EP+S+ E Sbjct: 762 DEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSEDDGKPEPKSYQE 821 Query: 4764 ALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR--RFK 4591 AL D KW AM +EM S+ KN TW L P + + +WVF K G RF Sbjct: 822 ALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFI 881 Query: 4590 AHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKE 4423 A LV KG DY EIFSPVVK SIR LL +V NM L+QMD KT FLHG L++E Sbjct: 882 ARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEE 941 Query: 4422 IYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFK 4243 IYM QP+GF + + VC L RSLYGLKQ+PRQW +FD FM ++ ++ D C YFK Sbjct: 942 IYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFK 1001 Query: 4242 KYT-NSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 K ++Y++LLLY+DDMLI ++ E N L +++ Sbjct: 1002 KCNGDTYIYLLLYVDDMLIASANKSEVNELKQLL 1035 Score = 104 bits (256), Expect(2) = 1e-072 Identities = 56/105 (53%), Positives = 71/105 (67%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKDLG AK+ILGM+ISRDR A L LSQE Y++KVL F++++AKP +TPL H Sbjct: 1035 LSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIH 1094 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYL 3834 FKL + E+ M +VPYA I S++ M+ TRPD Y L Sbjct: 1095 FKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSL 1139 Score = 87.8 bits (214), Expect(2) = 3e-033 Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIA------PATKLDLEGIGSTVEQKLYRGMIGSLL 87708 + Q+ YVK++L+ F+MD+AK + TP+ AT + E ++ Y IGS++ Sbjct: 1066 LSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIM 1125 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ +S+G+ +RF + P + H QAVK +L Y++GT + + K +F L GY Sbjct: 1126 YSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGY 1185 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D DY R+S TG Sbjct: 1186 CDSDYGSNFDTRRSITG 1202 Score = 83.9 bits (204), Expect(2) = 3e-033 Identities = 47/118 (39%), Positives = 67/118 (55%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G IS SK Q VA+S+ EAEY+A + LW+K ++ G + V + D+ S Sbjct: 1207 VGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQS 1266 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN V H+RTKH+DIR HF+RD + G I + E A+IFT ++ FE Sbjct: 1267 AITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFE 1324 Score = 79.2 bits (192), Expect(3) = 2e-024 Identities = 44/131 (33%), Positives = 70/131 (52%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ +++ R++L +S + ++W E T YLINR ++ ++ + Sbjct: 570 YTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEE 629 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 P S L+ FGCL + +++ + K PR+ IF YP GYKV KK Sbjct: 630 KWTGALPDLSSLRKFGCLAY--IHADQGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCV 687 Query: 65343 VSRDVSFYENV 65375 +SR+V F E V Sbjct: 688 ISRNVIFREQV 698 Score = 67.9 bits (163), Expect = 2e-008 Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 5/224 (2%) Frame = -2 Query: 88560 QWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXX-XXXXXXXXGRSDEHS---IDK 88393 +W +D+ CS HMT K F +E R+ + S + Sbjct: 284 EWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTD 343 Query: 88392 VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 V Y+ + NL+S+ L D+ F+S + + +L G++ +Y +D T Sbjct: 344 VRYMPNMTRNLISLGTLEDR--GCWFKSQDGILKIVKGCSTILKGQKRDTLYILDGVTEE 401 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + V + + LWH RL H SQ + L+ K L + KE + CE C GK Sbjct: 402 GESHSSAEV-KDETALWHSRLGHMSQKGMEILVKKGC---LRREVIKELEFCEDCVYGKQ 457 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTR 87889 + SF Q V+ L +H DL G P S G Y VDDY+R Sbjct: 458 HRVSFAPAQHVTKE-KLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSR 505 Score = 57.8 bits (137), Expect(3) = 2e-024 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIVDDFSR 64791 FC C+ Q P ++ T + + DLW P++ + +YF+ VDD+SR Sbjct: 448 FCEDCVYGKQHRVSFAPAQHVTKEKLAY--VHSDLWGSPHNPASLGNSQYFISFVDDYSR 505 Query: 64792 STWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 W L K + + +V NQ +K +RT NGLE+ +H + K++ Sbjct: 506 KVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEE 560 Score = 39.5 bits (90), Expect(2) = 0.061 Identities = 33/146 (22%), Positives = 60/146 (40%), Gaps = 6/146 (4%) Frame = -1 Query: 90151 KAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCS------EYE 89990 KAK ++ + +I C +A + W+TL R F I SL + Sbjct: 48 KAKNVIFLNVADKVLRKIELCKTAAEAWETLD---------RLFMIRSLPHRVYTQLSFY 98 Query: 89989 AFKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKD 89810 FKM+ K + + I F ++ +L L T E Q +L P ++ V ++ + Sbjct: 99 TFKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNS 158 Query: 89809 LTNMTLDELVRNLKTYEMNVDKRGEGNKENFF 89714 + LD+++ + E + + E F Sbjct: 159 REKLRLDDVMVAARDKERELSQNNRPVVEGHF 190 Score = 25.8 bits (55), Expect(2) = 0.061 Identities = 13/29 (44%), Positives = 16/29 (54%), Gaps = 4/29 (13%) Frame = -2 Query: 89595 KEKNPERSQNGG----CFKCGKTDHQIKDCPMW 89509 K KN RS++ C+ CGK H K C W Sbjct: 205 KGKNRSRSKSADGKRVCWICGKEGHFKKQCYKW 237 Score = 24.7 bits (52), Expect(3) = 2e-024 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = +2 Query: 64529 LWHNRLGHVS 64558 LWH+RLGH+S Sbjct: 416 LWHSRLGHMS 425 >dbj|BAA89466.1| (AB033235) gag-pol polyprotein [Oryza sativa] Length = 1587 Score = 314 bits (797), Expect(2) = 3e-086 Identities = 197/582 (33%), Positives = 300/582 (50%), Gaps = 4/582 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S +H +LR V LRD RL+ KC F V+F G+VV+ +GI VD K+EA Sbjct: 904 IYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEA 963 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSAT---HLNLQDVSFMWLVKCDMSFLKL 38993 I W PT++T+V SF+GL +YRRFV+ FST A L ++V+F W +F L Sbjct: 964 IHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTL 1023 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K+ +T AP+L L F + CDASG+G+ VL+++G + Y S +L LNY T D Sbjct: 1024 KDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDK 1083 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL +V L W+HYL+ ++ ++DH SL+ I Q N R +W+E ++ + I + Sbjct: 1084 ELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKHNRRHAKWVEFIESFPYVIKHK 1143 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQ 38453 GK+N++A +LSR+ S+ G++ Sbjct: 1144 KGKENVIADALSRRY-------------------------------AMLSQLDFKIFGLE 1172 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQL-IL 38276 + F+D LL+ ++ G + +G + + ++ +P S+ + +L Sbjct: 1173 TIKEQYAHDDDFKD-VLLNCKE----GRTWNKFVLTNGFVFRANKLCIP--ASSVHMLLL 1225 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 EAH H G KM L H+ W R D+ FV+RC Q+ K L G + Sbjct: 1226 QEAHGGGLMGHFGVKKMEDILADHFFWPKKRRDVERFVARCTTCQKAK-SRLNPHGLYMP 1284 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L + W+ I+MDFV GLP+T KG DSI+V+VD+ +K AHF+P +A ++ Sbjct: 1285 LPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFR 1344 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 E+VR HGVP +I+SDR ++F S F T +LGT++ S HPQTD Q+E + L M Sbjct: 1345 EIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTM 1404 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRS 37598 L + + ++ P +FAYN HS + F +YG + R+ Sbjct: 1405 LRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRA 1450 Score = 244 bits (616), Expect(2) = 3e-082 Identities = 122/270 (45%), Positives = 172/270 (63%) Frame = +2 Query: 56435 PYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTL 56614 PYR P E +E++ Q+QELL KG++R S +P VL V KKD S+RMC++ R +N +T+ Sbjct: 751 PYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITI 810 Query: 56615 KNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSF 56794 + ++ IP +DD D + G+ VFSKIDL SGY Q+++ + KTAF T+ G YE+LV F Sbjct: 811 RYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPF 870 Query: 56795 GLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYA 56974 GL NAP+ FM LMN + + ++ FV+V+ DDILIYS+S + L+ Sbjct: 871 GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFG 930 Query: 56975 KFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI 57154 KC FC VSFLG+VV+ G+ VD +K+EA+ W PT ++ V SF+GLA +YRRF+ Sbjct: 931 NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFV 990 Query: 57155 *VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 FS+IA L LTK+NV F W+ +F Sbjct: 991 KDFSTIAAPLHELTKRNVTFTWAAAQRNAF 1020 Score = 140 bits (349), Expect(2) = 2e-058 Identities = 72/159 (45%), Positives = 103/159 (64%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 +P E I++D V+ L RT D I+V+V+R +K AHF+P + + +A ++ REI Sbjct: 1287 VPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREI 1346 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 VRLHGV +I+SDR TKF+SHFW ++ +LGT++ STT HPQTD Q+E + + L ML Sbjct: 1347 VRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLR 1406 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 A + W++ LP VEFAYN S H + + PFE +YG Sbjct: 1407 AVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYG 1445 Score = 115 bits (285), Expect(2) = 2e-058 Identities = 100/374 (26%), Positives = 160/374 (42%), Gaps = 8/374 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +V+ + I VD K+E I W P ++ Q+ SFLGLAG+YRR + + Sbjct: 948 VVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRN 1007 Query: 68552 LSCGLTSVRL----VFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVA 68719 ++ + + K + LL+ + + L DAS IGLG VL+Q+GK VA Sbjct: 1008 VTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFN--KTFELECDASGIGLGGVLLQEGKPVA 1065 Query: 68720 YASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLR 68899 Y S +L Y +D EL +V L+ W +YL+ F + ++H SL++I +Q R Sbjct: 1066 YFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKHNRR 1125 Query: 68900 KRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAM----LQVSKRPLAKDVQLL 69067 W+E ++ + I + GK NV+ADALS + + L L+ K A D Sbjct: 1126 HAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFK 1185 Query: 69068 SNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGV 69247 VL + G+ W + L + + F LC + +L Sbjct: 1186 D---VLLNCKEGRTWNKFVLTNGF-------VFRANKLC-----IPASSVHMLLLQEAHG 1230 Query: 69248 LRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSR 69427 + GH G+ + L H+ + +RD+ FV+R Sbjct: 1231 GGLMGHF-------------------------GVKKMEDILADHFFWPKKRRDVERFVAR 1265 Query: 69428 CLNCQQVKHEHQKPGGVTLRIP 69493 C CQ+ K P G+ + +P Sbjct: 1266 CTTCQKAK-SRLNPHGLYMPLP 1286 Score = 99.1 bits (243), Expect = 9e-018 Identities = 74/201 (36%), Positives = 106/201 (51%), Gaps = 11/201 (5%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 ++G FSKIDLRS YHQ++++ D KTAF+T++G YE+LVM F LTNA +TFM LMN Sbjct: 826 LSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNE 885 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY 68391 R + E+H HLR VF L++ +L+ KC + + + + Sbjct: 886 VLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKC-TFCTDRVSF 944 Query: 68392 HG------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT 68538 G G E D + + + +R L+ Y DF +IA+ L LT Sbjct: 945 LGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELT 1004 Query: 68539 *KEVTFLWSDECEVSFQKLKT*LTTARILTLP 68634 + VTF W+ +F LK LT A +L LP Sbjct: 1005 KRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLP 1036 Score = 94.4 bits (231), Expect = 2e-016 Identities = 55/145 (37%), Positives = 85/145 (57%), Gaps = 6/145 (4%) Frame = +2 Query: 67628 CLAYMAHIGDTSVE-----TNMLESILVVSEFLEVFPTDLPD-VPPDSDIDFYIDVDLGT 67789 C + I DT + TN+L+ E+ ++FP ++P +PP I+ ID+ G Sbjct: 691 CKETLFPIEDTPISLRPPVTNLLQ------EYADIFPKEVPPGLPPIRGIEHQIDLIPGA 744 Query: 67790 KPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQ 67969 PYR P E KE++ Q+Q+LL+K ++R S+S P+L V +KD MC+D R Sbjct: 745 SLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRA 804 Query: 67970 LNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +N ITI +PIPR+DD+ D L G+ V ++ Sbjct: 805 INNITIRYRHPIPRLDDMLDELSGSLVFSKI 835 Score = 91.3 bits (223), Expect(2) = 3e-082 Identities = 46/123 (37%), Positives = 71/123 (57%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + CD S GLG VL+ E + Y S +L NY T+D +L A+V L+ W+HYL+ Sbjct: 1042 FELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWP 1101 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + +++DH SL ++ +Q N R +W+E ++ I + GK NV+ADALSR+ + Sbjct: 1102 KEFVIHSDHESLKHIRSQAKHNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAML 1161 Query: 57667 GSL 57675 L Sbjct: 1162 SQL 1164 Score = 48.4 bits (113), Expect = 0.015 Identities = 26/84 (30%), Positives = 38/84 (44%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G + ++C+P + +L EAH H G KM L HF W + + D+ FV Sbjct: 1205 GFVFRANKLCIP-ASSVHMLLLQEAHGGGLMGHFGVKKMEDILADHFFWPKKRRDVERFV 1263 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMP 58154 A+C CQ+ K P G +P Sbjct: 1264 ARCTTCQKAK-SRLNPHGLYMPLP 1286 Score = 34.0 bits (76), Expect(2) = 3e-086 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 Y+ L +P+ + APS F+ LM + R + FV+++ DDIL+ +E Sbjct: 863 YEWLVMPFGLTN---APSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIE 910 >gb|AAF79348.1|AC007887_7 (AC007887) F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 319 bits (808), Expect(2) = 9e-086 Identities = 217/622 (34%), Positives = 324/622 (51%), Gaps = 8/622 (1%) Frame = -1 Query: 39478 TIKG-YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHE 39314 TI+G YE+L+M GLT H L + + Y+ +Y S EH Sbjct: 1022 TIQGLYEWLVMPFGLTNAPSTFMR----LMNHVLRAFIGRFVIVYFDDILVYSKSLEEHV 1077 Query: 39313 LYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSV 39134 +L++VL+ LR ++LYA KC F ++ F G VVS +G++VD K++AI W P SV Sbjct: 1078 EHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSV 1137 Query: 39133 TEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSAPIL 38963 EV SF GL +YRRFV+ FST A T + ++V F W + +F LKE +T AP+L Sbjct: 1138 GEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVL 1197 Query: 38962 TLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALM 38783 +L F I CDASGVG+ VLM+ I Y S +L LNYPT D EL +V AL Sbjct: 1198 SLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQ 1257 Query: 38782 IWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYS 38603 +HYL+ ++ +TDH SL+ + Q+ LN R RW+E ++ + I Y GK N+VA + Sbjct: 1258 TGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADA 1317 Query: 38602 LSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGW 38423 LSR+ +V+ S LD + +L + ++ SLY + + Sbjct: 1318 LSRR---YVLLSS---------LDAK----------------LLGFEHIK-SLYANDSDF 1348 Query: 38422 QFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIH 38243 + + S ++ G DG L + R+ +P +L + EAH H Sbjct: 1349 E----KIYSSCEKFAFG----KYYRHDGFLFYDNRLCIPN-SSLRELFIREAHGGGLMGH 1399 Query: 38242 LGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRI 38063 G +K + ++ H+ W M+ D+ RC +Q K + + G + L I W+ I Sbjct: 1400 FGVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKS-QPHGLYTPLPIPSHPWNDI 1458 Query: 38062 TMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVS 37883 +MDFV GLP+T G DSI+V+VD+ +K AHF+P + +A ++ EVVR HG+P + Sbjct: 1459 SMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKT 1518 Query: 37882 IISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ 37703 I+SDR ++F S F T +LGT++ S HPQTD Q+E + L +L + + Sbjct: 1519 IVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKT 1578 Query: 37702 *DQFSPLAQFAYNSIFHSNIQMVLFVALYG 37613 + P +FAYN HS + F +YG Sbjct: 1579 WEDCLPHVEFAYNHSMHSASKFSPFQIVYG 1608 Score = 235 bits (592), Expect(2) = 2e-081 Identities = 122/272 (44%), Positives = 171/272 (62%) Frame = +2 Query: 56432 PPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVT 56611 P YR P E +EL+ Q+ EL+ +G IR S +P VL V KKD S+RMC++ R +N +T Sbjct: 914 PAYRTNPVETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNIT 973 Query: 56612 LKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKS 56791 +K ++ IP +DD D + G+ +FSK+DL SGY Q+++ + KTAF T G YE+LV Sbjct: 974 VKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMP 1033 Query: 56792 FGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLY 56971 FGL NAP+ FM LMN + + ++ FVIV+ DDIL+YSKS + + LY Sbjct: 1034 FGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLY 1093 Query: 56972 AKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRF 57151 A KC F ++ FLG VVS DGV VD K++A++ W P +V +V SF GLA +YRRF Sbjct: 1094 ANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRF 1153 Query: 57152 I*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 + FS++A LT + K+NV F W E++FQ Sbjct: 1154 VKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQ 1185 Score = 137 bits (341), Expect(2) = 6e-056 Identities = 69/159 (43%), Positives = 103/159 (64%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IP I++D VV L RT D I+V+V+R +K AHF+P T + +A ++ RE+ Sbjct: 1450 IPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREV 1509 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 VRLHG+ +I+SDR TKF+S+FW ++ +LGT++ STT HPQTD Q+E + + L +L Sbjct: 1510 VRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLR 1569 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 A + W+ LP VEFAYN+S H + + +PF+ +YG Sbjct: 1570 ALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYG 1608 Score = 110 bits (272), Expect(2) = 6e-056 Identities = 105/374 (28%), Positives = 166/374 (44%), Gaps = 25/374 (6%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS + + VD +K++ I++W P SV ++ SF GLAG+YRR + + Sbjct: 1112 VVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFST------------ 1159 Query: 68552 LSCGLTSV---RLVFKSSRLN*LLLEF*PYQWRERVLLYI-----------DASQIGLGC 68689 L+ LT V + FK + + + +L + DAS +G+G Sbjct: 1160 LAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGV 1219 Query: 68690 VLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQY 68869 VLMQ K +AY S +L Y +D EL +V AL+ +YL+ F + T+H SL++ Sbjct: 1220 VLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKH 1279 Query: 68870 IFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLA 69049 + Q+ L R W+E ++ + I Y GK NVVADALS + V + SL Sbjct: 1280 LKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSL----------- 1328 Query: 69050 KDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAI 69229 D +LL + S +D D KI ++ A Sbjct: 1329 -DAKLLG-----------------------FEHIKSLYANDSDFEKIYSS-CEKFAFGKY 1363 Query: 69230 LDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQ-----------GLLNIYLDLKQ 69376 +G L +C+P + + LFI+ G+ ++ Sbjct: 1364 YRHDGFLFYDNRLCIPNSSL------------RELFIREAHGGGLMGHFGVSKTIKVMQD 1411 Query: 69377 HYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 H+ MKRD+ RC C+Q K + Q P G+ +P Sbjct: 1412 HFHWPHMKRDVERICERCPTCKQAKAKSQ-PHGLYTPLP 1449 Score = 101 bits (249), Expect(2) = 2e-038 Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSK+DL+S YHQ++++E D KTAF+T G YE+LVM F LTNA +TFM LMN Sbjct: 992 GSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVL 1051 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE------IWLSV 68379 R + EEH HL+ V +L+++KLY KC ++L Sbjct: 1052 RAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGF 1111 Query: 68380 QRRYHGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*K 68544 G + D + + S + +R L+ Y DF ++A+ LT + K Sbjct: 1112 VVS-TDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKK 1170 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTLP 68634 V F W E +FQ LK LT A +L+LP Sbjct: 1171 NVGFKWEQAQEDAFQALKEKLTHAPVLSLP 1200 Score = 97.5 bits (239), Expect(2) = 2e-081 Identities = 53/123 (43%), Positives = 75/123 (60%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + CD S G+G VLM ++ I Y S +L NYPT+D +L A+V AL+ +HYL+ Sbjct: 1206 FEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWP 1265 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + ++TDH SL ++ Q+ LN R RW+E ++ I Y GK NVVADALSR+ + Sbjct: 1266 KEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLL 1325 Query: 57667 GSL 57675 SL Sbjct: 1326 SSL 1328 Score = 87.4 bits (213), Expect(2) = 2e-038 Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%) Frame = +2 Query: 67694 VVSEFLEVFPTDLP-DVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLN 67870 ++ ++ +VFP + P +PP I+ ID G P YR P E KE++ Q+ +L+ Sbjct: 876 LLQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVTELME 935 Query: 67871 KVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 + IR S+S P+L V +KD MC+D R +N IT+ +PIPR+DD+ D L G+S+ Sbjct: 936 RGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSI 995 Score = 50.8 bits (119), Expect = 0.003 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDF 58079 +G L R+C+P L + EAH H G +K ++ HF W M+ D+ Sbjct: 1367 DGFLFYDNRLCIPN-SSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVERI 1425 Query: 58080 VAQCPNCQQVKYEHQRPGGTLKRMP 58154 +CP C+Q K + Q P G +P Sbjct: 1426 CERCPTCKQAKAKSQ-PHGLYTPLP 1449 Score = 28.2 bits (61), Expect(2) = 9e-086 Identities = 19/75 (25%), Positives = 35/75 (46%) Frame = -3 Query: 37523 ESIQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPF 37344 E + + ++ +A+ R + F+ D +++H+ + R KL R GPF Sbjct: 1642 EQAKKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKE--RKSKLMSRIDGPF 1699 Query: 37343 EILRIAGEVAYELDL 37299 ++L+ AY LDL Sbjct: 1700 KVLKRINNNAYSLDL 1714 >gb|AAF13073.1|AC011621_1 (AC011621) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1661 Score = 261 bits (660), Expect(2) = 2e-077 Identities = 182/619 (29%), Positives = 287/619 (45%), Gaps = 5/619 (0%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYWLYLWSWSEHELYLRIVLQT 39287 YEFL+M GLT + + L + + +Y H +L VLQ Sbjct: 832 YEFLVMPFGLTNAPSTFQSVMNDLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLETVLQL 891 Query: 39286 LRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHSFVGL 39107 L + YA F KC F +++ GH++S++G+ DP K+EA+ W P SVTE+ F+G Sbjct: 892 LHLHQFYANFKKCTFGSTRISYLGHIISEQGVATDPEKVEAMLQWPLPKSVTELRGFLGF 951 Query: 39106 VSYYRRFVEGFSTSATHL--NLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFT 38933 YYRRFV+ + A L L+ SF W +F LK +++ P+L L FT Sbjct: 952 TGYYRRFVKNYGQIARPLRDQLKKNSFDWNEAATSAFQALKAAVSALPVLVLPDFQQEFT 1011 Query: 38932 IYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQ 38753 + DASG+G+ VL + I ++S+ + EL IV A+ W+HYL + Sbjct: 1012 VETDASGMGIGAVLSQNKRLIAFLSQAFSSQGRIRSVYERELLAIVKAVTKWKHYLSSKE 1071 Query: 38752 YETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVV 38573 + TD SL+ ++ Q+ +++ RW L I Y PG N VA +LSR+ + Sbjct: 1072 FIIKTDQRSLRHLLEQKSVSTIQQRWASKLSGLKYRIEYKPGVDNKVADALSRRPPTEAL 1131 Query: 38572 YPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED*ALLSL 38393 + G P +D+ + A + L + W Sbjct: 1132 SQLTITG--PPTIDL---------------TALKAEIQQDHELSQILKNW---------- 1164 Query: 38392 RDQVLAGDGDQATLDF---DGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMY 38222 GD DF DG++ G + +P I +L + H H G K + Sbjct: 1165 ------AQGDHHDSDFTVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEGALKTF 1218 Query: 38221 RDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAG 38042 + L W G+R D+ +++ C Q+ K L G L I + W +++DFV G Sbjct: 1219 KRLTSEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEG 1278 Query: 38041 LPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGS 37862 LP +++ + I V+VD+L+K +HF+P++ F+ + +I +VV+ HG P +++SDR Sbjct: 1279 LPSSNR-FNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDR 1337 Query: 37861 QFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPL 37682 F S F + GT + S A+HPQTD Q+E + LE L Q+ P Sbjct: 1338 IFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPW 1397 Query: 37681 AQFAYNSIFHSNIQMVLFVALYGR 37610 A++ YN+ +HS + F A+YGR Sbjct: 1398 AEYWYNTSYHSATKTTPFQAVYGR 1421 Score = 240 bits (605), Expect(2) = 1e-074 Identities = 119/276 (43%), Positives = 171/276 (61%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQL 56599 P++I PYR + A+ E++ ++E+L IRPS +P+ + VL VKKKD +R C++YR L Sbjct: 715 PVNIRPYRYSFAQKNEIEKLVREMLNAQIIRPSVSPYSSPVLLVKKKDGGWRFCVDYRAL 774 Query: 56600 NKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEF 56779 N+ T+ +KY IP I++ D ++GA VFSK+DL SGY Q+++ ++V KTAF T GHYEF Sbjct: 775 NEATIPDKYPIPVIEELLDELKGATVFSKLDLKSGYFQIRMKLSDVEKTAFKTHEGHYEF 834 Query: 56780 LVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXX 56959 LV FGL NAP+ F +MN +F+PYL FV+VF DDIL+YS K Sbjct: 835 LVMPFGLTNAPSTFQSVMNDLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLETVLQLLHL 894 Query: 56960 KNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASY 57139 YA F KC F +S+LGH++S+ GV D K+EA+ W P +V+++ F+G Y Sbjct: 895 HQFYANFKKCTFGSTRISYLGHIISEQGVATDPEKVEAMLQWPLPKSVTELRGFLGFTGY 954 Query: 57140 YRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YRRF+ + IA L + K+N F W+ +FQ Sbjct: 955 YRRFVKNYGQIARPLRDQLKKN-SFDWNEAATSAFQ 989 Score = 118 bits (293), Expect(4) = 3e-085 Identities = 60/160 (37%), Positives = 97/160 (60%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IP+ +++D V L + +F+ I V+V+RL+K +HF+P++ + K + + +IR++ Sbjct: 1263 IPQQIWSDVSLDFVEGLPSS-NRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDV 1321 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 V+LHG +++SDR F+S FW + K GT + ST +HPQTD Q+E + + LE L Sbjct: 1322 VKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLR 1381 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 W Q+LP E+ YN SYH + + PF+A+YGR Sbjct: 1382 CFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGR 1421 Score = 96.0 bits (235), Expect(4) = 3e-085 Identities = 90/385 (23%), Positives = 166/385 (42%), Gaps = 14/385 (3%) Frame = +2 Query: 68339 FTRSFQSVRFG---------LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYR 68491 F +F+ FG ++S++ + DP+K+E + W P SV ++ FLG GYYR Sbjct: 897 FYANFKKCTFGSTRISYLGHIISEQGVATDPEKVEAMLQWPLPKSVTELRGFLGFTGYYR 956 Query: 68492 RSMISYPXXXX---XXXXXXXX*LSCGLTSVRLVFKS--SRLN*LLLEF*PYQWRERVLL 68656 R + +Y + TS K+ S L L+L +++ + Sbjct: 957 RFVKNYGQIARPLRDQLKKNSFDWNEAATSAFQALKAAVSALPVLVLP----DFQQEFTV 1012 Query: 68657 YIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHF 68836 DAS +G+G VL Q +++A+ S+ + +++ EL+ +V A+ W +YL F Sbjct: 1013 ETDASGMGIGAVLSQNKRLIAFLSQAFSSQGRIRSVYERELLAIVKAVTKWKHYLSSKEF 1072 Query: 68837 AVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSL 69016 + T+ RSL+++ Q+ + ++ W L I Y PG N VADALS + + +L Sbjct: 1073 IIKTDQRSLRHLLEQKSVSTIQQRWASKLSGLKYRIEYKPGVDNKVADALSRRPPT-EAL 1131 Query: 69017 AMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRD 69196 + L ++ P L + + E + W G + S F Sbjct: 1132 SQLTITGPPTIDLTALKAE--IQQDHELSQILKNWAQGDHHDSDF--------------- 1174 Query: 69197 KVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQ 69376 ++G++ KG + +P + + +G L + L Sbjct: 1175 -----------TVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEGALKTFKRLTS 1223 Query: 69377 HYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++D+V+++ C CQ+ K+ P G+ +P Sbjct: 1224 EVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLP 1262 Score = 86.6 bits (211), Expect(4) = 3e-085 Identities = 45/108 (41%), Positives = 58/108 (53%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSK+DL+S Y Q++++ D+ KTAF+T GHYEFLVM F LTNA +TF +MN F Sbjct: 797 GATVFSKLDLKSGYFQIRMKLSDVEKTAFKTHEGHYEFLVMPFGLTNAPSTFQSVMNDLF 856 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKC 68361 R Y + H HL TV +L + Y F KC Sbjct: 857 RPYLRKFVLVFFDDILVYSPDMKTHLKHLETVLQLLHLHQFYANFKKC 904 Score = 86.6 bits (211), Expect(4) = 3e-085 Identities = 43/108 (39%), Positives = 70/108 (64%) Frame = +2 Query: 67739 VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLL 67918 +PP + + I + G+ P+ + PYR + A+ E++ ++++LN IR SVS + +P+L Sbjct: 697 LPPVRNREHAITLQEGSSPVNIRPYRYSFAQKNEIEKLVREMLNAQIIRPSVSPYSSPVL 756 Query: 67919 FVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 VK+KD C+DYR LN+ TI + YPIP I++L D L+GA+V +L Sbjct: 757 LVKKKDGGWRFCVDYRALNEATIPDKYPIPVIEELLDELKGATVFSKL 804 Score = 69.9 bits (168), Expect(2) = 1e-074 Identities = 40/116 (34%), Positives = 61/116 (52%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F V D S G+GAVL + +I + S+ ++ +L A+V A+ +W+HYL Sbjct: 1010 FTVETDASGMGIGAVLSQNKRLIAFLSQAFSSQGRIRSVYERELLAIVKAVTKWKHYLSS 1069 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 + + TD RSL ++ QK ++ ++RW L I Y G N VADALSR+ Sbjct: 1070 KEFIIKTDQRSLRHLLEQKSVSTIQQRWASKLSGLKYRIEYKPGVDNKVADALSRR 1125 Score = 57.8 bits (137), Expect(2) = 2e-077 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMK-GVMRFGRWGKLSPRYIGPFE 37341 +++ L I Q++ + AD R + F + + ++L + P + + + KLS RY GPF+ Sbjct: 1453 LRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFK 1512 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIP 37236 +L G+VAY+L L P S IHPVF VS + +P Sbjct: 1513 VLHRIGQVAYKLQL-PEHSTIHPVFHVSQLKRAVP 1546 Score = 50.0 bits (117), Expect = 0.005 Identities = 24/85 (28%), Positives = 41/85 (48%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDF 58079 +G++ K + +P I +L + H+S H GA K + L W ++ D+V++ Sbjct: 1178 DGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEGALKTFKRLTSEVYWRGLRKDVVNY 1237 Query: 58080 VAQCPNCQQVKYEHQRPGGTLKRMP 58154 + C CQ+ KY P G L +P Sbjct: 1238 IKGCQICQENKYSTLSPAGLLSPLP 1262 >gb|AAD23690.1|AC006841_23 (AC006841) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1333 Score = 298 bits (755), Expect(2) = 2e-084 Identities = 192/600 (32%), Positives = 306/600 (51%), Gaps = 10/600 (1%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +MSEN S+ +I+EF I++ L + ++ DE +A++L+ SLP+ +D + + Sbjct: 122 LYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYG 181 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDS-SGSALSVN*RRRSKTKGQINMVDQNQRIEEN 6438 G L DE+ + SK + + S G A + + +++T+G+ N +++ Sbjct: 182 LGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEKTETRGRTEQRGNNNNNKKS 241 Query: 6437 LRTDQT*LV*IVEKNDTFGRAIQSQRRNRIKNLEMTMIL*IQQRTLGML*FLV*TALLNH 6258 ++ G I + N N L + + L T + Sbjct: 242 RSKSRS----------KKGCWICGESSNGSSNYSEANGLYVSEA-------LSSTDIHLE 284 Query: 6257 GFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLD 6084 W++ H + +E F++ G V + + ++ G G + +K L Sbjct: 285 DEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLT 344 Query: 6083 DVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMD 5904 +VRYIP + +NL+S+G F+ +GY+ G+ I+ G V+ TLY Sbjct: 345 NVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYLLQW---RP 401 Query: 5903 VVAESVS------GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKR 5742 V ES+S + LWH RLGHMS K M +L+ KG L+ K + CE C+ GK KR Sbjct: 402 VTEESLSVVKRQDDTILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLETCEDCIYGKAKR 461 Query: 5741 VSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDV 5565 + F + + L+ H+D+WG PS SLG +++++FI D++RKV +YFLK + Sbjct: 462 IGFNLAQHDT-REKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEA 520 Query: 5564 FATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGID 5385 F F +W VENQ+ ++K LR+DNG E+ F FC+ KGI R +QNG+ Sbjct: 521 FDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVA 580 Query: 5384 ERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKY 5205 ERMN+ L E RSM + G+PK FWA T A LIN+ PS L +++ ++ W K Y Sbjct: 581 ERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIY 640 Query: 5204 SHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFD 5025 S+LR FGC +VH D KLN +A K L+GY + GY+ W + +K + +V F Sbjct: 641 SYLRRFGCIAFVHTDD---GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQ 697 Query: 5024 ESVMYKDKEQ 4995 E+ YKD Q Sbjct: 698 ENASYKDMMQ 707 Score = 194 bits (487), Expect(2) = 2e-065 Identities = 114/260 (43%), Positives = 168/260 (63%), Gaps = 13/260 (5%) Frame = -2 Query: 4935 INVEADTQPTPTEESEEVTREQVLRRSSRTIRAPDRY------SHSLHYLLLIDEGEPES 4774 +N E D +P S ++ R+ R RTIRAP R+ + +L+ E EP Sbjct: 763 VNSETDIIQSPL--SYQLVRD----RDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPAD 816 Query: 4773 FDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG--KR 4600 + EA + + KW+LAM++EM S KN TW + P ++ + ++W+++ K G + Sbjct: 817 YSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEG 876 Query: 4599 RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDL 4432 RFKA LV KG A DY EIF+PVVK SIRIL+ IVA E++ LEQ+D KT FLHG+L Sbjct: 877 RFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGEL 936 Query: 4431 DKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCC 4252 ++IYM P+G+ KE VC L +SLYGLKQAP+QW +KF+++M++ F ++ D C Sbjct: 937 KEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCA 996 Query: 4251 YFKKYTN-SYVFLLLYLDDMLIEGSSMRENNNL 4156 Y K+ ++ S V+LLLY+DDML+ + + + L Sbjct: 997 YIKELSDGSRVYLLLYVDDMLVAAKNKEDISQL 1029 Score = 96.0 bits (235), Expect(3) = 3e-026 Identities = 52/130 (40%), Positives = 73/130 (56%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ L+E R++L S LP ++W E TT LIN+ +S L+ + + Sbjct: 572 YTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDK 631 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P YSYL+ FGC+ F +++ K PR I +GYP GYK+ KK Sbjct: 632 RWSGKSPIYSYLRRFGCIAF--VHTDDGKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCV 689 Query: 65343 VSRDVSFYEN 65372 VSR+V F EN Sbjct: 690 VSRNVIFQEN 699 Score = 92.1 bits (225), Expect(2) = 2e-033 Identities = 48/118 (40%), Positives = 70/118 (58%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG IS S +Q VALST EAEY++ + +W+K L +FG + + V IFCD+ S Sbjct: 1205 LGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQS 1264 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN V H+RTKH+D+R+ ++RD + G + E+ ADIFT + F+ Sbjct: 1265 AIALSKNNVHHERTKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQ 1322 Score = 85.0 bits (207), Expect(2) = 2e-065 Identities = 43/103 (41%), Positives = 64/103 (61%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS F+MKDLG AK+ILGM+I R+R TL LSQ Y+ K+L + + ++K TPL H Sbjct: 1033 LSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAH 1092 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 K+ K ++ ++M +PY+ A+ S++ M+ TRPD Y Sbjct: 1093 LKMRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAY 1135 Score = 80.0 bits (194), Expect(2) = 2e-033 Identities = 42/132 (31%), Positives = 77/132 (57%), Gaps = 11/132 (8%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL----------YRGM 87723 W+ Q Y+ ++L+ + M ++K + TP+ K+ +TVE++ Y Sbjct: 1063 WLSQNGYLNKILETYNMAESKHVVTPLGAHLKMR----AATVEKQEQDEDYMKSIPYSSA 1118 Query: 87722 IGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNF 87546 +GS++Y + +RPD+ + VG+ +R+ + P H VK +L Y+KG+ + Y + S+F Sbjct: 1119 VGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDF 1178 Query: 87545 DLVGYADVDYVGYLVDRKSTTGM 87477 +VGY D D+ R+S TG+ Sbjct: 1179 KVVGYCDADHAACKDRRRSITGL 1201 Score = 71.4 bits (172), Expect = 2e-009 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 5/226 (2%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS----I 88399 + +W MD+ CS HMT + F L E +E + Sbjct: 284 EDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRL 343 Query: 88398 DKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTST 88219 V Y+ + NLLS+ +++ F+ + + ++L +R +Y + Sbjct: 344 TNVRYIPEMDRNLLSLGTF--EKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRP 401 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 + ++ L + + D +LWH+RL H SQ ++ L+ K L L K K + + CE C G Sbjct: 402 VTEESLSVVK-RQDDTILWHRRLGHMSQKNMDLLLKKGL---LDKKKVSKLETCEDCIYG 457 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQ-SRGEKIYVFVLVDDYTR 87889 K + F Q + LE +H DL G V S G+ Y +DDYTR Sbjct: 458 KAKRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTR 507 Score = 47.6 bits (111), Expect(3) = 3e-026 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Frame = +1 Query: 64564 QNERNLLYSYILLTKKTF-----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-E 64725 Q +LL LL KK C C+ +G+ I F + + + + + DLW Sbjct: 428 QKNMDLLLKKGLLDKKKVSKLETCEDCI-YGKAKRIGFNLAQHDTREKL-EYVHSDLWGA 485 Query: 64726 PYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTY 64905 P + +YF+ +DD++R L K + +LV NQ IK++RT Sbjct: 486 PSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTD 545 Query: 64906 NGLEFISHETNIYLKKK 64956 NGLEF + + + +K Sbjct: 546 NGLEFCNRSFDEFCSQK 562 Score = 44.1 bits (102), Expect(2) = 2e-084 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQI---------------EDYLYQKDLHESLTGVKPKS- 6974 M ++++E+EKFDG D+ +WK ++ ED L +K LT + K Sbjct: 1 MSAARIEVEKFDGRGDYTMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEEEEKEE 60 Query: 6973 -MTEEKWKLKDR*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVYLMR 6797 + E + K R A I L+++ V I KE++ + +L L +Y + N++Y + Sbjct: 61 VLRRELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIYQKQ 120 Query: 6796 RCSIYK 6779 + +K Sbjct: 121 KLYSFK 126 Score = 24.3 bits (51), Expect(3) = 3e-026 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +2 Query: 64529 LWHNRLGHVS 64558 LWH RLGH+S Sbjct: 418 LWHRRLGHMS 427 >gb|AAB61111.1| (AC002062) Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gb|U12626). [Arabidopsis thaliana] Length = 1315 Score = 173 bits (433), Expect(3) = 5e-082 Identities = 114/358 (31%), Positives = 174/358 (47%), Gaps = 9/358 (2%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFD-STGYAAVFGKGSWKIVKGV--IVVARGTNSGTLYTT-L 5922 L+DV +IP K NL+SV S G F + S + ++V G LY L Sbjct: 325 LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDL 384 Query: 5921 GCIN-----MDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVM 5757 ++ + SV+ LWH RLGH S + ++ + + + K+ C C + Sbjct: 385 DSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHI 444 Query: 5756 GKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKH 5577 KQK + F + + + H D WGP V + G R+++T + D+SR WVY L++ Sbjct: 445 SKQKHLPFVSHNNKSSRPF-DLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRN 503 Query: 5576 NSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQ 5397 SDV + VENQ +K +RSDN E + FT F +KGI + P +Q Sbjct: 504 KSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKGIVPYHSCPETPQQ 560 Query: 5396 NGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRK 5217 N + ER ++ + ARS+ +P ++W + + T YLINR P+ L K EV + Sbjct: 561 NSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKT 620 Query: 5216 ELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCD 5037 Y H++ FGC Y P+ R+K + +A C IGY S GY+ D + I+ Sbjct: 621 VPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRH 680 Query: 5036 VTFDESV 5016 V F E + Sbjct: 681 VVFHEEL 687 Score = 150 bits (375), Expect(3) = 5e-082 Identities = 97/252 (38%), Positives = 146/252 (57%), Gaps = 32/252 (12%) Frame = -2 Query: 4932 NVEADTQPTPTEESEEVTREQVLRRSSRTIRAPDRYSHS--------------------- 4816 +VE PT E + + R++ + D Y HS Sbjct: 728 SVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDP 787 Query: 4815 -LHYLLLIDEG-EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLN 4642 L +L +D+ EP ++ EA +++ W AM E LE TW + LPA KR + Sbjct: 788 YLTFLACLDKTKEPSNYTEAEKLQ---VWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGC 844 Query: 4641 KWVFRIKT*PDGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMH 4477 +W+F+IK DG R+KA LV +G DY E FSPV KL S+++LL + A + Sbjct: 845 RWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLS 904 Query: 4476 LEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHM----VCKLTRSLYGLKQAPRQWYKK 4309 L Q+D FL+GDLD+EIYM+ P+G+ + + VC+L +SLYGLKQA RQWY K Sbjct: 905 LTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLK 964 Query: 4308 FDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 F S + F ++ D C+ K ++ +L+Y+DD++I ++ Sbjct: 965 FSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNN 1008 Score = 144 bits (360), Expect(3) = 4e-057 Identities = 70/133 (52%), Positives = 87/133 (64%), Gaps = 1/133 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T QQN VERKH+H+L VAR+L +QS +P YWG+CILT YLINRL +L +K F+V Sbjct: 557 TPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEV 616 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L P Y ++KVFGCLC+ T + KF PR F+GYP GYK+LD T I Sbjct: 617 LTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSII 676 Query: 65343 VSRDVSFYENVFPF 65384 VSR V F+E +FPF Sbjct: 677 VSRHVVFHEELFPF 690 Score = 93.6 bits (229), Expect(3) = 4e-057 Identities = 42/84 (50%), Positives = 58/84 (69%) Frame = +1 Query: 64666 IKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIK 64845 + + S+R FDL+ +D W P+ V TH+GY+YFL IVDD+SR+TW LL KS+ L I Sbjct: 453 VSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIP 512 Query: 64846 SFVSLVGNQFRVTIKSIRTYNGLE 64917 +FV++V NQF TIK +R+ N E Sbjct: 513 TFVTMVENQFETTIKGVRSDNAPE 536 Score = 91.3 bits (223), Expect(2) = 2e-035 Identities = 52/139 (37%), Positives = 76/139 (54%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 I+ + +G I Q+KY +LL K P+ P+ + G VE YR +IG Sbjct: 1039 IVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIG 1098 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 L+YL +RPDI F+V A+F P+++H+QAV +IL Y+KGT G++Y S L Sbjct: 1099 RLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLK 1158 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 YA+ DY R+ST+G Sbjct: 1159 VYANADYNSCRDSRRSTSG 1177 Score = 87.8 bits (214), Expect(2) = 2e-035 Identities = 48/130 (36%), Positives = 77/130 (58%), Gaps = 1/130 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPI-FCDN 87295 FLG LI S+KQ+ V+ S+AEAEY + ++ +++W+ L + + + + + FCDN Sbjct: 1181 FLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDN 1240 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 +AI+I N V H+RTKH++ H +R+ + KG + E QIAD FT L HF Sbjct: 1241 EAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFH 1300 Query: 87114 RNRLELGMMKI 87082 R ++G++ I Sbjct: 1301 RLISKMGLLNI 1311 Score = 76.9 bits (186), Expect = 4e-011 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 1/178 (0%) Frame = -1 Query: 670 MKLAMLGRNKMGLLDGSCPKDKFLGLEC-IWERXXXXXXXXXXXXVEKGLLGSIMYATCA 494 M ++ +NK+G +DGS PK C IW R V K + SI+Y A Sbjct: 1 MTTSIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTA 60 Query: 493 *DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVVVPTPSCE 314 +W +LY RF+K + L Q+I ++ QG + Y ++++ LWE+ + P Sbjct: 61 AAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVP--- 117 Query: 313 CERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMSDESKNQS 137 ++ ++ LMGLN+ Y RSQIL+ P +++ + M+ DE++ + Sbjct: 118 -RTVEDLLIERETNRVIDFLMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDETQRSA 175 Score = 74.5 bits (180), Expect = 2e-010 Identities = 56/177 (31%), Positives = 84/177 (46%), Gaps = 5/177 (2%) Frame = -2 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKEN-KVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDT 88225 ++ V ++ NLLS+S L ++ F T + + + +V +GK+ ++Y VD Sbjct: 325 LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDL 384 Query: 88224 STIY----DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVC 88057 ++ D + SV D LWHKRL H S + KL ++ PK K D C Sbjct: 385 DSLSHPGTDSSITVASVTSHD--LWHKRLGHPS---VQKLQPMSSLLSFPKQKNNTDFHC 439 Query: 88056 EACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*R 87877 C + K F S SS +LIH+D GP VQ+ Y +VDDY+R T Sbjct: 440 RVCHISKQKHLPFVSHNNKSSR-PFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWV 498 Query: 87876 YM 87871 Y+ Sbjct: 499 YL 500 Score = 65.2 bits (156), Expect = 1e-007 Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 1/227 (0%) Frame = +1 Query: 62932 CGNDVMIWSLRGFLIHYQKTLPTTCSMSITQRHFGMNLSDRYDQANGAKLYLLHCEINGL 63111 C + V W L K + T+ T +L R+ +++ +LY L +I+ L Sbjct: 34 CNSMVKSWLLNSV----SKEIYTSILYFPTAAAIWKDLYTRFHKSSLPRLYKLRQQIHSL 89 Query: 63112 TQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALVVES*RCITLSKTDASFNSLW-LNE 63288 Q NLD++SY+T+ + L EEL++ + V L++E +T+ + L LN+ Sbjct: 90 RQGNLDLSSYHTRTQTLWEELTSLQAVPR-TVEDLLIE-------RETNRVIDFLMGLND 141 Query: 63289 VYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPHGKLNFDSTSLHVNVAASSSTNFR 63468 Y VR IL+ LP++++ F+++ +E R + S+ V+ +S S Sbjct: 142 CYDTVRSQILMKKTLPSLSEVFNMIDQDETQRSARISTTPGMTSSVFPVSNQSSQSALNG 201 Query: 63469 TNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFPIGFK 63612 Y + YC GH +D CYK +P FK Sbjct: 202 DTY-------------QKKERPVCSYCSRPGHVEDTCYKKHGYPTSFK 236 Score = 60.9 bits (145), Expect = 3e-006 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = +3 Query: 62853 SQSVKNKTGFINGKIASPSPDSAAFALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKAL 63032 S KNK GF++G I P D +W+RC+ MV SW NS+ K++ ++ Y A A+ Sbjct: 4 SIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAI 63 Query: 63033 WDEL 63044 W +L Sbjct: 64 WKDL 67 Score = 40.2 bits (92), Expect = 4.4 Identities = 23/68 (33%), Positives = 36/68 (52%) Frame = +2 Query: 64058 GDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGPSMKSPLEIGR 64237 G L L L+ +LF+ FKFNL+SV SL I F+ SC++Q + + + +G+ Sbjct: 315 GSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGK 374 Query: 64238 AHNGLYFL 64261 LY + Sbjct: 375 QVANLYIV 382 Score = 39.9 bits (91), Expect = 5.8 Identities = 17/29 (58%), Positives = 21/29 (71%) Frame = -3 Query: 80009 NDVLFIPEFKYNLLPVPQLTNQLRCVVLF 79923 NDVLFIP+FK+NLL V LT + C + F Sbjct: 326 NDVLFIPQFKFNLLSVSSLTKSMGCRIWF 354 Score = 34.4 bits (77), Expect(3) = 4e-057 Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 3/39 (7%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHISFSPKKH---FVCTVCPMDR 64645 LWH RLGH S K++ +SS+ +SF +K+ F C VC + + Sbjct: 406 LWHKRLGHPSVQKLQPMSSL-LSFPKQKNNTDFHCRVCHISK 446 Score = 32.5 bits (72), Expect(3) = 5e-082 Identities = 26/102 (25%), Positives = 47/102 (45%) Frame = -3 Query: 4154 TRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLA 3975 +++ + F+++DLG K LG++I R +++SQ Y +L KP + P+ Sbjct: 1017 SQMKSFFKLRDLGELKYFLGLEIVRSDKG--IHISQRKYALDLLDETGQLGCKPSSIPMD 1074 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 + + VE + PY I L+ + + TRPD Sbjct: 1075 PSMVFAHDSGGDFVE------VGPYRRLIGRLMYLNI-TRPD 1109 >gb|AAD17358.1| (AF128395) contains similarity to reverse transcriptase (Pfam: PF00078, Score=137.6, E=2.3e-37, N=1) and CCHC-type zinc fingers (Pfam: PF00098, Score=18.3, E=0.024, N=2) [Arabidopsis thaliana] Length = 901 Score = 310 bits (786), Expect = 2e-081 Identities = 153/277 (55%), Positives = 196/277 (70%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T +S PYRMAPAE+ ++K QL +LLGKGFIRPS +PWG VLFVKKKD SFR+CI+YR Sbjct: 378 TASLSKAPYRMAPAEMAKVKKQLDDLLGKGFIRPSTSPWGEPVLFVKKKDWSFRLCIDYR 437 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+VT+K KY +P I++ D ++GA FSKID TSGY Q+ I V KTAF TR GH+ Sbjct: 438 GLNQVTMKKKYPLPRINELLDQLRGATCFSKIDFTSGYHQIPIAEAYVRKTAFKTRYGHF 497 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EF+V FGL NAPAAFM LMN +F+ +L+ FVI+FIDDIL+YSKS + Sbjct: 498 EFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEHEVHLMRVMEKL 557 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 + L+AK KC F + FLGH+ S GV VD KIEA++ W KPTN +++ SF+GLA Sbjct: 558 WEQKLFAKLSKCSFWQREMGFLGHIFSAKGVSVDPEKIEAIRDWPKPTNATEIRSFLGLA 617 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 YYRRF+ F+S+A ++ LT +NVPF+WS +CEE F Sbjct: 618 GYYRRFVKGFASMAQPMSKLTGKNVPFVWSLDCEEGF 654 Score = 239 bits (604), Expect(2) = 1e-065 Identities = 152/423 (35%), Positives = 216/423 (50%), Gaps = 3/423 (0%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++L V++ L +Q+L+AK SKC FW + + F GH+ S +G+ VDP KIEA Sbjct: 538 VYSKSPEEHEVHLMRVMEKLWEQKLFAKLSKCSFWQREMGFLGHIFSAKGVSVDPEKIEA 597 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W +PT+ TE+ SF+GL YYRRFV+GF++ A + L ++V F+W + C+ F+ L Sbjct: 598 IRDWPKPTNATEIRSFLGLAGYYRRFVKGFASMAQPMSKLTGKNVPFVWSLDCEEGFMSL 657 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++ S P+L L +G I Y SR+L+ HE NYPT DL Sbjct: 658 KEMLMSTPVLIARAWR----------------ALHGRGKVIAYGSRQLRKHEGNYPTHDL 701 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+ ++FAL IWR YLYG + + I YH Sbjct: 702 EMVAVIFALKIWRSYLYGGK----------------------------------VQIAYH 727 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQ 38453 PGK N+V +LSRK+ V + + L +I C V + V Q Sbjct: 728 PGKANVVTDALSRKR----VGAAPGQSVKALVSEIDALRLCAVAREPLGLEAV-----DQ 778 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILS 38273 L R R Q +D L++ +G + +G + GR+ VP + Q ILS Sbjct: 779 VDLLSRVRLAQEKDEGLIA----ASKAEGFEYQFVANGTILVHGRVCVPKDKELRQEILS 834 Query: 38272 EAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRL 38093 EAH +SIH G KMYRDL+++Y W GM+ D+A++V C Q VK+EH + L Sbjct: 835 EAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWVEECDVCQLVKIEHQVPSSLLQSL 894 Query: 38092 SISEWK 38075 I EWK Sbjct: 895 PIPEWK 900 Score = 132 bits (329), Expect = 7e-028 Identities = 120/374 (32%), Positives = 169/374 (45%), Gaps = 17/374 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR------SMISYPXXXXXXX 68533 + S + + VDP+KIE I+DW +P + +I SFLGLAGYYRR SM Sbjct: 582 IFSAKGVSVDPEKIEAIRDWPKPTNATEIRSFLGLAGYYRRFVKGFASMAQPMSKLTGKN 641 Query: 68534 XXXXX*LSC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 L C G S++ + S+ + L+ WR L +G Sbjct: 642 VPFVWSLDCEEGFMSLKEMLMSTPV--LIAR----AWR----------------ALHGRG 679 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AY SRQL+ HE Y HDLE+V V+FALKIW +YLYG Sbjct: 680 KVIAYGSRQLRKHEGNYPTHDLEMVAVIFALKIWRSYLYG-------------------- 719 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLL 69067 + I YHPGK NVV DALS K V A S + L ++ L Sbjct: 720 --------------GKVQIAYHPGKANVVTDALSRKRVG----AAPGQSVKALVSEIDAL 761 Query: 69068 SNSFV----LYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILD 69235 V L + + L+ R+ +Q+ D+G + K E Sbjct: 762 RLCAVAREPLGLEAVDQVDLLSRVR-------LAQEKDEGLIA-----ASKAEGFEYQFV 809 Query: 69236 SEGVLRIKGHICVPRTGI*LD*TWRRSIV---*VTLFI--QGLLNIYLDLKQHYLCCRMK 69400 + G + + G +CVP+ D R+ I+ ++F G +Y DLK++Y MK Sbjct: 810 ANGTILVHGRVCVPK-----DKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMK 864 Query: 69401 RDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 RD+ ++V C CQ VK EHQ P + +P Sbjct: 865 RDVANWVEECDVCQLVKIEHQVPSSLLQSLP 895 Score = 109 bits (271), Expect(2) = 3e-047 Identities = 76/196 (38%), Positives = 101/196 (50%), Gaps = 14/196 (7%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKID S YHQ+ + E + KTAF+TRYGH+EF+VM F LTNA A FM LMN F Sbjct: 462 GATCFSKIDFTSGYHQIPIAEAYVRKTAFKTRYGHFEFVVMPFGLTNAPAAFMRLMNSVF 521 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 +++ EEHE HL V L E+KL+ K SKC W +R G Sbjct: 522 QEFLDEFVIIFIDDILVYSKSPEEHEVHLMRVMEKLWEQKLFAKLSKCSFW----QREMG 577 Query: 68398 ---------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRL 68535 G D + ++ +R L+ Y F S+A +++L Sbjct: 578 FLGHIFSAKGVSVDPEKIEAIRDWPKPTNATEIRSFLGLAGYYRRFVKGFASMAQPMSKL 637 Query: 68536 T*KEVTFLWSDECEVSFQKLKT*LTTARIL 68625 T K V F+WS +CE F LK L + +L Sbjct: 638 TGKNVPFVWSLDCEEGFMSLKEMLMSTPVL 667 Score = 108 bits (268), Expect(2) = 3e-047 Identities = 51/103 (49%), Positives = 71/103 (68%) Frame = +2 Query: 67739 VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLL 67918 +PP F I+++ GT + PYR+ PAE+ ++K QL DLL K FIR S S WG P+L Sbjct: 362 LPPSRSDPFMIELEPGTASLSKAPYRMAPAEMAKVKKQLDDLLGKGFIRPSTSPWGEPVL 421 Query: 67919 FVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGAS 68047 FVK+KD +CIDYR LN++T+ YP+PRI++L D L+GA+ Sbjct: 422 FVKKKDWSFRLCIDYRGLNQVTMKKKYPLPRINELLDQLRGAT 464 Score = 96.0 bits (235), Expect = 8e-017 Identities = 42/87 (48%), Positives = 60/87 (68%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVCVP+ +L IL+EAH+S +SIHPGATKMY DLK+++ W M+ D+ ++V Sbjct: 812 GTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVANWV 871 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 +C CQ VK EHQ P L+ +P E Sbjct: 872 EECDVCQLVKIEHQVPSSLLQSLPIPE 898 Score = 78.8 bits (191), Expect = 1e-011 Identities = 51/115 (44%), Positives = 59/115 (50%), Gaps = 13/115 (11%) Frame = +1 Query: 57370 VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGVKCEVYTDHRSLPYVFTQKDL 57549 VI Y SRQL+ HE NYPTHDL++ AV+FALK WR YLYG K Sbjct: 681 VIAYGSRQLRKHEGNYPTHDLEMVAVIFALKIWRSYLYGGK------------------- 721 Query: 57550 NLRRRRWMELLKDNDITILYHLGKANVVADALSRK-------------VGSMGSLAHSQV 57690 + I YH GKANVV DALSRK V + +L V Sbjct: 722 ---------------VQIAYHPGKANVVTDALSRKRVGAAPGQSVKALVSEIDALRLCAV 766 Query: 57691 SRRPLARE 57714 +R PL E Sbjct: 767 AREPLGLE 774 Score = 40.2 bits (92), Expect(2) = 1e-065 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 504 FGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 538 >gb|AAD15321.1| (AC005142) putative reverse transcriptase [Arabidopsis thaliana] Length = 839 Score = 263 bits (664), Expect(2) = 1e-072 Identities = 125/237 (52%), Positives = 169/237 (70%), Gaps = 3/237 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 574 VYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 633 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+GL YYRRF++GF++ A T L +DV F+W +C+ F+ L Sbjct: 634 IRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 693 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DASGVG+ LM++G I Y SR+L+ HE NYPT DL Sbjct: 694 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDL 753 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 754 EMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 813 Score = 188 bits (473), Expect(2) = 3e-081 Identities = 91/171 (53%), Positives = 119/171 (69%) Frame = +2 Query: 56732 NVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSR 56911 +V KTAF TR GH+EF+V FGL NAPAAFM LMN +F+ +L+ FVI+FIDDIL+YSKS Sbjct: 520 DVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSP 579 Query: 56912 KXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVK 57091 + + L+AK KC F + FLGH+VS +GV VD KIEA++ W + Sbjct: 580 EEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWPR 639 Query: 57092 PTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 PTN +++ SF+GLA YYRRFI F+S+A +T LT ++VPF+WS ECEE F Sbjct: 640 PTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGF 690 Score = 178 bits (446), Expect = 1e-041 Identities = 95/194 (48%), Positives = 126/194 (63%), Gaps = 8/194 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + +I SFLGLAGYYRR + + Sbjct: 618 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKD 677 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY ++Y DAS +GLGC LMQ+G Sbjct: 678 VPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPY------MVYTDASGVGLGCALMQRG 731 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL+ HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIF Q + Sbjct: 732 KVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 791 Query: 68888 LKLRKRIWLELLKDYDMTILYH 68953 L LR+R W+EL+ DYD+ I YH Sbjct: 792 LNLRQRRWMELVADYDLEIAYH 813 Score = 143 bits (357), Expect(2) = 3e-081 Identities = 66/105 (62%), Positives = 81/105 (76%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG LM VI YASRQL+ HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 712 YMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYG 771 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGK 57621 K +V+TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YHL + Sbjct: 772 GKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHLAE 816 Score = 115 bits (284), Expect = 1e-022 Identities = 77/190 (40%), Positives = 102/190 (53%), Gaps = 14/190 (7%) Frame = +1 Query: 68092 LREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXXXXXXX 68271 L E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F+++ Sbjct: 516 LAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVY 575 Query: 68272 XCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG---------GSEKD*DN* 68424 EEHE HLR V L+E+KL+ K SKC W +R G G D + Sbjct: 576 SKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFW----QREMGFLGHIVSAEGVSVDPEKI 631 Query: 68425 RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVTFLWSDECEVSFQ 68589 ++ +R L+ Y F S+A +T+LT K+V F+WS ECE F Sbjct: 632 EAIRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGFV 691 Query: 68590 KLKT*LTTARILTLPVEREGFVVY 68661 LK LT+ +L LP E ++VY Sbjct: 692 SLKEMLTSTPVLALPEHGEPYMVY 715 Score = 50.0 bits (117), Expect = 0.005 Identities = 27/69 (39%), Positives = 41/69 (59%) Frame = +2 Query: 67679 LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQ 67858 + I VV EF VF + L +PP F I+++ T P+ PYR+ PA++ E+K QL+ Sbjct: 455 VSDIRVVQEFQYVFQS-LQGLPPSRSDPFTIELEPKTAPLSKAPYRMAPAKMAELKKQLE 513 Query: 67859 DLLNKVFIR 67885 DLL + +R Sbjct: 514 DLLAEADVR 522 Score = 49.6 bits (116), Expect = 0.007 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Frame = -3 Query: 40733 KMIGVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWW 40557 +M+ QR+ FSG E+A ++ S D T H G A WW Sbjct: 143 RMMKQLQRIGTEYFSGGTSPEEADSWRSQVERNFGSSRCPAEYRVDLTVHFLEGDAHLWW 202 Query: 40556 RTY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEF 40377 R+ R +SW+ F F +++ PR R+ F L G ++ EY+ +F+ Sbjct: 203 RSVTARRR--QADMSWADFMAEFNAKYFPREALDRMEARFLELTQGVRSVREYDRKFNRL 260 Query: 40376 SRHA 40365 +A Sbjct: 261 LVYA 264 Score = 42.6 bits (98), Expect = 0.88 Identities = 19/36 (52%), Positives = 27/36 (74%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSA 56521 T P+S PYRMAPA++ ELK QL++LL + +R +A Sbjct: 490 TAPLSKAPYRMAPAKMAELKKQLEDLLAEADVRKTA 525 Score = 41.4 bits (95), Expect = 2.0 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = +2 Query: 53759 FGVEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLS 53938 + V+ + + DA +WW+S + R M+WA F + F KY P DR FL Sbjct: 185 YRVDLTVHFLEGDAHLWWRSVTARR--RQADMSWADFMAEFNAKYFPREALDRMEARFLE 242 Query: 53939 LEQG 53950 L QG Sbjct: 243 LTQG 246 Score = 40.2 bits (92), Expect(2) = 1e-072 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 540 FGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 574 Score = 39.5 bits (90), Expect = 7.6 Identities = 22/64 (34%), Positives = 34/64 (52%) Frame = +1 Query: 66376 DFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEADRLIR 66555 DF F AK+ PR ++ A F L QG SV E++ KF+ L +A + ++ R Sbjct: 218 DFMAEFNAKYFPREALDRMEARFLELTQGVRSVREYDRKFNRLLVYAGRGMEDDQAQMRR 277 Query: 66556 FVKG 66567 F++G Sbjct: 278 FLRG 281 >emb|CAB77850.1| (AL161497) putative reverse transcriptase [Arabidopsis thaliana] Length = 839 Score = 263 bits (664), Expect(2) = 1e-072 Identities = 125/237 (52%), Positives = 169/237 (70%), Gaps = 3/237 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EHE++LR V++ LR+Q+L+AK SKC FW + + F GH+VS EG+ VDP KIEA Sbjct: 574 VYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 633 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 I W RPT+ TE+ SF+GL YYRRF++GF++ A T L +DV F+W +C+ F+ L Sbjct: 634 IRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 693 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE++TS P+L L G + +Y DASGVG+ LM++G I Y SR+L+ HE NYPT DL Sbjct: 694 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDL 753 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E+A ++FAL IWR YLYG + + +TDH SL+ I Q +LN R RW+EL+ DYDL I YH Sbjct: 754 EMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 813 Score = 188 bits (473), Expect(2) = 3e-081 Identities = 91/171 (53%), Positives = 119/171 (69%) Frame = +2 Query: 56732 NVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSR 56911 +V KTAF TR GH+EF+V FGL NAPAAFM LMN +F+ +L+ FVI+FIDDIL+YSKS Sbjct: 520 DVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSP 579 Query: 56912 KXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVK 57091 + + L+AK KC F + FLGH+VS +GV VD KIEA++ W + Sbjct: 580 EEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWPR 639 Query: 57092 PTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 PTN +++ SF+GLA YYRRFI F+S+A +T LT ++VPF+WS ECEE F Sbjct: 640 PTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGF 690 Score = 178 bits (446), Expect = 1e-041 Identities = 95/194 (48%), Positives = 126/194 (63%), Gaps = 8/194 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS E + VDP+KIE I+DW RP + +I SFLGLAGYYRR + + Sbjct: 618 IVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKD 677 Query: 68552 L------SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG 68707 + C G S++ + S+ + L PY ++Y DAS +GLGC LMQ+G Sbjct: 678 VPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPY------MVYTDASGVGLGCALMQRG 731 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 KV+AYASRQL+ HE Y HDLE+ V+FALKIW +YLYG VFT+H+SL+YIF Q + Sbjct: 732 KVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 791 Query: 68888 LKLRKRIWLELLKDYDMTILYH 68953 L LR+R W+EL+ DYD+ I YH Sbjct: 792 LNLRQRRWMELVADYDLEIAYH 813 Score = 143 bits (357), Expect(2) = 3e-081 Identities = 66/105 (62%), Positives = 81/105 (76%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 ++VY D S GLG LM VI YASRQL+ HE NYPTHDL++AAV+FALK WR YLYG Sbjct: 712 YMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYG 771 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGK 57621 K +V+TDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YHL + Sbjct: 772 GKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHLAE 816 Score = 115 bits (284), Expect = 1e-022 Identities = 77/190 (40%), Positives = 102/190 (53%), Gaps = 14/190 (7%) Frame = +1 Query: 68092 LREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXXXXXXX 68271 L E D+ KTAF+TRYGH+EF+VM F LTNA A FM LMN F+++ Sbjct: 516 LAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVY 575 Query: 68272 XCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG---------GSEKD*DN* 68424 EEHE HLR V L+E+KL+ K SKC W +R G G D + Sbjct: 576 SKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFW----QREMGFLGHIVSAEGVSVDPEKI 631 Query: 68425 RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVTFLWSDECEVSFQ 68589 ++ +R L+ Y F S+A +T+LT K+V F+WS ECE F Sbjct: 632 EAIRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGFV 691 Query: 68590 KLKT*LTTARILTLPVEREGFVVY 68661 LK LT+ +L LP E ++VY Sbjct: 692 SLKEMLTSTPVLALPEHGEPYMVY 715 Score = 50.0 bits (117), Expect = 0.005 Identities = 27/69 (39%), Positives = 41/69 (59%) Frame = +2 Query: 67679 LESILVVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQ 67858 + I VV EF VF + L +PP F I+++ T P+ PYR+ PA++ E+K QL+ Sbjct: 455 VSDIRVVQEFQYVFQS-LQGLPPSRSDPFTIELEPKTAPLSKAPYRMAPAKMAELKKQLE 513 Query: 67859 DLLNKVFIR 67885 DLL + +R Sbjct: 514 DLLAEADVR 522 Score = 49.6 bits (116), Expect = 0.007 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Frame = -3 Query: 40733 KMIGVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWW 40557 +M+ QR+ FSG E+A ++ S D T H G A WW Sbjct: 143 RMMKQLQRIGTEYFSGGTSPEEADSWRSQVERNFGSSRCPAEYRVDLTVHFLEGDAHLWW 202 Query: 40556 RTY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEF 40377 R+ R +SW+ F F +++ PR R+ F L G ++ EY+ +F+ Sbjct: 203 RSVTARRR--QADMSWADFMAEFNAKYFPREALDRMEARFLELTQGVRSVREYDRKFNRL 260 Query: 40376 SRHA 40365 +A Sbjct: 261 LVYA 264 Score = 42.6 bits (98), Expect = 0.88 Identities = 19/36 (52%), Positives = 27/36 (74%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSA 56521 T P+S PYRMAPA++ ELK QL++LL + +R +A Sbjct: 490 TAPLSKAPYRMAPAKMAELKKQLEDLLAEADVRKTA 525 Score = 41.4 bits (95), Expect = 2.0 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = +2 Query: 53759 FGVEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLS 53938 + V+ + + DA +WW+S + R M+WA F + F KY P DR FL Sbjct: 185 YRVDLTVHFLEGDAHLWWRSVTARR--RQADMSWADFMAEFNAKYFPREALDRMEARFLE 242 Query: 53939 LEQG 53950 L QG Sbjct: 243 LTQG 246 Score = 40.2 bits (92), Expect(2) = 1e-072 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ LM +F+ LD FVIIF+DDILV Sbjct: 540 FGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILV 574 Score = 39.5 bits (90), Expect = 7.6 Identities = 22/64 (34%), Positives = 34/64 (52%) Frame = +1 Query: 66376 DFTQVFLAKFVPRS*MEYKRAEFEGLQQGGMSVAEFEGKFHALARHASMIFPTEADRLIR 66555 DF F AK+ PR ++ A F L QG SV E++ KF+ L +A + ++ R Sbjct: 218 DFMAEFNAKYFPREALDRMEARFLELTQGVRSVREYDRKFNRLLVYAGRGMEDDQAQMRR 277 Query: 66556 FVKG 66567 F++G Sbjct: 278 FLRG 281 >emb|CAA31653.1| (X13291) polyprotein [Arabidopsis thaliana] Length = 1291 Score = 296 bits (751), Expect = 2e-077 Identities = 198/603 (32%), Positives = 320/603 (52%), Gaps = 19/603 (3%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M++ S+++++NEF IV++L+S++IN +E++A++ ++ L + + + Sbjct: 139 YSFKMNDTKSINENVNEFLKIVAELSSLEINVVEEVRAILFLNRLSSRYSQLKHTLKYGN 198 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRD------SSGSALSVN*RRRSKTKGQI-NMVDQNQ 6453 + LK DV+ + +RE+ + ++ + L N R R +T+ Q N Q + Sbjct: 199 KALSLK-----DVISAARSLERELNEQKETDKNTSTVLYTNERSRPQTRNQNHNKGGQGR 253 Query: 6452 -RIEENLRTDQT*LV*IVE---KNDTFGRAIQSQRRNRIKNLEMTMIL*IQQRTLGML*F 6285 R + N T E K D F R + + N + +T L + Sbjct: 254 GRSKSNSNAKLTCWYCKKEGHVKKDYFARKRKLESENPGEAGVITEKLVFSEA------- 306 Query: 6284 LV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKT 6111 L L W+L SH S ++ F +F+ + L D+ +++ +G+G + I+T Sbjct: 307 LSVNDLAVRDIWVLDSGCTSHMSARRDWFCSFREDGGPTILLGDDHSVKSQGQGSIKIET 366 Query: 6110 TLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLY 5931 L++V+Y+P +++NLIS G D GY G G + K RG LY Sbjct: 367 HGGTIIGLENVKYVPELRRNLISTGTLDKRGYKHEGGDGKVRYFKNQKTALRGELVNGLY 426 Query: 5930 TTLG--CINMDVVAESVSGSC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCV 5760 G ++ VAE G LWH+RLGH+ MK+L KG + + + CE+CV Sbjct: 427 ILDGNTVLSETCVAEGSKGKTELWHSRLGHIGLNNMKVLAGKGLVSKEEIRVLDFCENCV 486 Query: 5759 MGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVS-SLGGSRFYVTFIYDFSRKVWVYFL 5583 MGK K+VSF VL + H D+WG + V+ SL G++++++ I D +RKVW+YFL Sbjct: 487 MGKAKKVSFNVGKHNSEDVL-RYVHADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLYFL 545 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 + + F F +WK VENQ + KVK LR+DNG E+ F A+C GI + Sbjct: 546 RSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKFDAYCKEHGIERHKTCTYTP 605 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 +QNG+ ERMN+ + E R M G+ + FWA +T AYLINR P+ + + EE+W+ Sbjct: 606 QQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLINRSPASAIDHNVPEELWL 665 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 K+ Y HLR FG YVH+D + KL +A+K IGY + GY+ W + K + Sbjct: 666 NKKPGYKHLRRFGSIAYVHID---QGKLKPRALKGIFIGYPAGTKGYKIWLLEEHKCVIS 722 Query: 5042 CDVTFDESVMYKD--KEQKVLE 4983 +V F E +YKD K+++V+E Sbjct: 723 RNVLFHEESVYKDTMKKERVVE 744 Score = 205 bits (515), Expect(2) = 7e-067 Identities = 113/255 (44%), Positives = 166/255 (64%), Gaps = 13/255 (5%) Frame = -2 Query: 4920 DTQPTPTEESEEVTREQVLRRSSRTIRAPDRYSH------SLHYLLLIDEGEPESFDEAL 4759 +TQ T + + ++ R+ R R I P R++ +L + + EP+S+ EA Sbjct: 798 ETQTTSSLANYQLARD----RERRQIHPPARFTEESGVAFALVTVETLSMEEPQSYQEAT 853 Query: 4758 QVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR--RFKAH 4585 ++ KW+LA +EM SL KN TWVL D P ++ + +W+F++K+ G R+KA Sbjct: 854 SDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVEPVRYKAQ 913 Query: 4584 LVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIY 4417 LV KG DY EIF+ VVK TSIRIL+ +V +++ LEQMD KT FLHG+L++E+Y Sbjct: 914 LVAKGYTHREGVDYQEIFALVVKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELY 973 Query: 4416 MQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKY 4237 M+QP+G + E+ VC L +SLYGLKQ+PRQW K+F+ FM F ++E D C Y K+ Sbjct: 974 MEQPEGCISEDGENKVCLLKKSLYGLKQSPRQWNKRFNRFMIDQNFIRSEHDACVYVKQV 1033 Query: 4236 T-NSYVFLLLYLDDMLIEGSSMRENNNL 4156 + +++LLLY+DDMLI G S E N + Sbjct: 1034 SEQEHLYLLLYVDDMLIAGKSKSEINKV 1061 Score = 88.5 bits (216), Expect(3) = 1e-028 Identities = 46/129 (35%), Positives = 71/129 (54%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ ++E R +L +S L +W E T YLINR S + + + Sbjct: 603 YTPQQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLINRSPASAIDHNVPEE 662 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + NK P Y +L+ FG + + ++ + K +PR IF+GYP T GYK+ K Sbjct: 663 LWLNKKPGYKHLRRFGSIAY--VHIDQGKLKPRALKGIFIGYPAGTKGYKIWLLEEHKCV 720 Query: 65343 VSRDVSFYE 65369 +SR+V F+E Sbjct: 721 ISRNVLFHE 729 Score = 79.2 bits (192), Expect(2) = 7e-067 Identities = 43/106 (40%), Positives = 61/106 (56%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKD+GPA +ILG+ I RD L +SQ YI V+ RF + +AK +P+ Sbjct: 1064 QLSMEFEMKDMGPASRILGIDIIRDMKNGVLRMSQASYIHNVVQRFNMAEAKVTRSPIGA 1123 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYL 3834 HFKL+ + + N VPYA A+ S++ M+ RPD Y + Sbjct: 1124 HFKLAAVRDDDECIDNN---AVPYASAVGSIMYAMIGIRPDLAYVI 1166 Score = 74.9 bits (181), Expect(2) = 7e-018 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 6/128 (4%) Frame = -3 Query: 87863 QQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQKLYRGMIGSLLY-L 87702 Q Y+ +++RF M +AK +PI KL D E I + Y +GS++Y + Sbjct: 1098 QASYIHNVVQRFNMAEAKVTRSPIGAHFKLAAVRDDDECIDNNAVP--YASAVGSIMYAM 1155 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 RPD+ + + L +R+ P H +AVK IL Y++G+ DL + + K F + GY D Sbjct: 1156 IGIRPDLAYVICLVSRYMARPGSIHWEAVKWILRYMRGSQDLNLVFTKEKEFRVTGYCDS 1215 Query: 87521 DYVGYLVDRKSTTG 87480 DY L R+S +G Sbjct: 1216 DYAADLDRRRSVSG 1229 Score = 60.5 bits (144), Expect = 4e-006 Identities = 64/228 (28%), Positives = 89/228 (38%), Gaps = 6/228 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEH-----SIDK 88393 W +DS C+ HM+ + F S E + + H ++ Sbjct: 318 WVLDSGCTSHMSARRDWFCSFRE-DGGPTILLGDDHSVKSQGQGSIKIETHGGTIIGLEN 376 Query: 88392 VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 V YV L NL+S L DK G +V QK L G+ +Y +D +T+ Sbjct: 377 VKYVPELRRNLISTGTL-DKRGYKHEGGDG-KVRYFKNQKTALRGELVNGLYILDGNTVL 434 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + V K LWH RL H + L K LV K + + CE C +GK Sbjct: 435 SETCVAEGSKGKTE-LWHSRLGHIGLNNMKVLAGKGLV---SKEEIRVLDFCENCVMGKA 490 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRV-QSRGEKIYVFVLVDDYTRNT*RY 87874 K SF + +S L +H DL G V S Y ++DD TR Y Sbjct: 491 KKVSFNVGKH-NSEDVLRYVHADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLY 543 Score = 59.7 bits (142), Expect(3) = 1e-028 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 4/113 (3%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRL---DLWEPYHVLTH-NGYKYFLMIVDD 64782 FC +C+ G+ + F + S D+LR DLW +V +G KYFL I+DD Sbjct: 481 FCENCVM-GKAKKVSFNVGKHNSE----DVLRYVHADLWGSTNVTPSLSGNKYFLSIIDD 535 Query: 64783 FSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 +R W L K T + LV NQ +K +RT NGLEF + + + Y K+ Sbjct: 536 KTRKVWLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKFDAYCKE 592 Score = 49.2 bits (115), Expect = 0.009 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 26/196 (13%) Frame = -1 Query: 90316 KARMEDFIQAEDYELWVRITKGQL-----------------IPTITDSEGNKVPKPADTY 90188 K + F + D+ LW K L +P I SEG K+ + Sbjct: 12 KTSFQVFNENSDFSLWKTCMKAHLGLAGLKGIIDDFDLTMTVP-IPKSEGKKIEDGDEQG 70 Query: 90187 NEADYKM------LGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVR 90026 + + K+ + K+ A I++ +G +I C SA ++W+TL + T+ Sbjct: 71 DSSQTKIVPDLVKIEKSENAMNIIIAHVGDAVLRKIDHCKSAAEMWETLNKQYMETSLPN 130 Query: 90025 KFKIASLCSEYEAFKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVL---RIFP 89855 + + ++ +FKM KS+ + + F ++ EL SL E+V +L R+ Sbjct: 131 RIYVQ---LKFYSFKMNDTKSINENVNEFLKIVAELSSL--EINVVEEVRAILFLNRLSS 185 Query: 89854 RSWEIKVTAIREAKDLTNMTLDELVRNLKTYEMNVDKRGEGN 89729 R ++K T K L+ + R+L+ E+N K + N Sbjct: 186 RYSQLKHTLKYGNKALSLKDVISAARSLER-ELNEQKETDKN 226 Score = 44.9 bits (104), Expect(2) = 7e-018 Identities = 21/58 (36%), Positives = 35/58 (60%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDN 87295 +G +S + Q+ ALST EAE++A + LWIK + D GL+ ++V ++CD+ Sbjct: 1234 VGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDS 1291 Score = 27.8 bits (60), Expect(3) = 1e-028 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +2 Query: 64496 SCMSHGNS-TDYLWHNRLGHVSFIKMK 64573 +C++ G+ LWH+RLGH+ MK Sbjct: 437 TCVAEGSKGKTELWHSRLGHIGLNNMK 463 >dbj|BAA16011.1| (D90851) ORF_ID:o373#10~similar to [PIR Accession Number JQ0042] [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >dbj|BAA16003.1| (D90850) ORF_ID:o373#10~similar to [PIR Accession Number JQ0042] [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >dbj|BAA15820.1| (D90838) ORF_ID:o348#3~similar to [PIR Accession Number JQ0042] [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >dbj|BAA15017.1| (D90779) ORF_ID:o267#8~similar to [PIR Accession Number JQ0042] [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >dbj|BAA15011.1| (D90778) ORF_ID:o267#8~similar to [PIR Accession Number JQ0042] [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >emb|CAA23539.1| (V00279) ORF 4 (AA 1-143) [Escherichia coli] Length = 143 Score = 295 bits (748), Expect = 5e-077 Identities = 142/143 (99%), Positives = 143/143 (99%) Frame = -2 Query: 20835 VQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 20656 +QCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR Sbjct: 1 MQCLTITAVQRERDTQSLSVITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQR 60 Query: 20655 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 20476 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI Sbjct: 61 ILAHDPVNTFGIDRRHTIKFCLSAKQRPYPTITIRWQLSDNMVYTEKHIRIISVTTAAAI 120 Query: 20475 HPVIGSSENDVQLRTRHPETTAD 20407 HPVIGSSENDVQLRTRHPETTAD Sbjct: 121 HPVIGSSENDVQLRTRHPETTAD 143 >gb|AAF65309.1|AF229252_1 (AF229252) reverse transcriptase [Picea glauca] Length = 542 Score = 220 bits (554), Expect(2) = 1e-076 Identities = 118/251 (47%), Positives = 179/251 (71%), Gaps = 15/251 (5%) Frame = -2 Query: 4926 EADTQPTPTEESEEVTREQ------VLRRSSRTIRAPDRYS----HSLHYLLLIDEGEPE 4777 +A ++ EE+EEV E+ VL RS R R P+RYS HS ++ L I + +P Sbjct: 14 DAKSKSYEEEEAEEVAVEEEETHTLVLMRSVRDRRQPERYSPPGFHS-NFSLSITDDDPI 72 Query: 4776 SFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-R 4600 + EA+ EDS W+ M +EM SL+KN++W + +L A ++++ KW+F+ K +GK Sbjct: 73 TVREAVNSEDSKLWKKPMVEEMDSLDKNESWDIVELLARRKSVGRKWLFKKKFNVEGKVE 132 Query: 4599 RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDL 4432 ++KA LV KG + ++ EIFSPV KLTSIR LL IV + ++ +EQMD KT FLHGDL Sbjct: 133 KYKARLVEKGYSQVEGIEFGEIFSPVAKLTSIRFLLSIVVAFDLEVEQMDVKTTFLHGDL 192 Query: 4431 DKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCC 4252 ++EIYM+QP+GFVV G + +VCK+ +SL G+KQ+PR WY+KFD+++ + F + D C Sbjct: 193 EEEIYMKQPEGFVVKGNKELVCKINKSLCGVKQSPRMWYQKFDTYILRLGFVISRADHCV 252 Query: 4251 YFKKYTNSYVFLLLYLDDMLIEGSSM 4174 Y K+ N +++++LY+DDML+ G++M Sbjct: 253 YSKQVGNHFIYVVLYVDDMLLVGNNM 278 Score = 96.7 bits (237), Expect(2) = 1e-076 Identities = 50/102 (49%), Positives = 66/102 (64%) Frame = -3 Query: 4154 TRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLA 3975 ++LS+ F+MKDLG A ILGM I RDR+ L L+Q Y+E +L RF ++ +KP P+ Sbjct: 286 SQLSSKFDMKDLGAANFILGMDIKRDRANRKLWLNQRKYVETILQRFNIHGSKPVKVPIP 345 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 LS +Q PK EE M+ VPYA A+ SL+ MVCTRPD Sbjct: 346 IGVNLSADQCPKIQEEEEDMSHVPYASAVGSLMYAMVCTRPD 387 Score = 81.9 bits (199), Expect(2) = 1e-021 Identities = 48/134 (35%), Positives = 76/134 (55%), Gaps = 11/134 (8%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMI 87720 R W++Q+KYV+ +L+RF + +K + PI L + E++ Y + Sbjct: 315 RKLWLNQRKYVETILQRFNIHGSKPVKVPIPIGVNLSADQCPKIQEEEEDMSHVPYASAV 374 Query: 87719 GSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFD 87543 GSL+Y + +RPDI +VG +R+ + + H VKR+ YL GT+ G+ Y S D Sbjct: 375 GSLMYAMVCTRPDIAHAVGFLSRYMSKLGKEHWTTVKRVFRYLHGTTSYGLCYQGRSGLD 434 Query: 87542 LV----GYADVDYVGYLVDRKSTTG 87480 V G+ D D+VG L +ST+G Sbjct: 435 RVVDIHGFVDADWVGDLDHIRSTSG 459 Score = 50.8 bits (119), Expect(2) = 1e-021 Identities = 29/74 (39%), Positives = 41/74 (55%) Frame = -2 Query: 87453 IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTSAINIV 87274 IS SK Q VALST EAEY+ A +W+++ S GL + V + C+ SAI + Sbjct: 469 ISWMSKIQALVALSTTEAEYMVATHASQGSIWLQRLCSGIGLVQQVVRLDCEIQSAIFMA 528 Query: 87273 KNLVQHKRTKHVDI 87232 KN +T H+D+ Sbjct: 529 KNPAYDSKTNHIDV 542 >gb|AAF19226.1|AC007505_2 (AC007505) Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana] Length = 1356 Score = 294 bits (745), Expect = 1e-076 Identities = 190/601 (31%), Positives = 322/601 (52%), Gaps = 26/601 (4%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWD--------- 6642 +++ +M ++ +++EF IV++L S++I ++E++A+++++SLP S Sbjct: 130 LYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLKHTLKYG 189 Query: 6641 ----TVVAVISSSRGSEK-----LKFDEIRDVVLSKSIRKREV--RDSSGSALSVN*RRR 6495 TV V SS++ E+ + D+ + VL + R R + + G R Sbjct: 190 NKTLTVQDVTSSAKSLERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKGGQGKGRSRSN 249 Query: 6494 SKTKGQINMVDQNQRIEENLRTDQT*LV*IVEKNDTFGRAIQSQRRNRIKNLEMTMIL*I 6315 SKTK + ++++ + + +K ++ G Q + + L + L + Sbjct: 250 SKTKVPCWYCKKEGHVKKDCYSRK-------KKMESEG---QGEAGVITEKLVFSEALSV 299 Query: 6314 QQRTLGML*FLV*TALLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEI 6141 ++ + L WIL SH + ++ F +F+ + L D+ ++E Sbjct: 300 NEQMVKDL-------------WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVES 346 Query: 6140 EGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVV 5961 +G+G + I T + L++V+Y+P +++NLIS G D GY G+G + K Sbjct: 347 QGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTA 406 Query: 5960 ARGTNSGTLYTTLGCINMDVVAESVSG---SCLWHNRLGHMSAKGMKMLVAKGALEGLKS 5790 RG+ S LY G M + + + + LWH+RLGHMS +K+L KG ++ + Sbjct: 407 LRGSLSNGLYVLDGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEI 466 Query: 5789 FDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYD 5613 ++ CE CVMGK K+VSF + + L H D+WG P+ S+ G +++++ I D Sbjct: 467 NELEFCEHCVMGKSKKVSFN-VGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDD 525 Query: 5612 FSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGI 5433 +RKVW+YFLK + F F +WK+ VENQ + KVK LR+DNG E+ S F ++C GI Sbjct: 526 KTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGI 585 Query: 5432 RLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPL 5253 R +QNG+ ERMN+ + E R + G+ + FWA +T AYLINR P+ + Sbjct: 586 ERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAI 645 Query: 5252 GFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFW 5073 + EE+W+ ++ Y HLR FG YVH D + KL +A+K + +GY + GY+ W Sbjct: 646 NHNVPEEMWLNRKPGYKHLRKFGSIAYVHQD---QGKLKPRALKGFFLGYPAGTKGYKVW 702 Query: 5072 DDKNRKILRHCDVTFDESVMYKDKEQK 4992 + K + +V F ESV+Y+D + K Sbjct: 703 LLEEEKCVISRNVVFQESVVYRDLKVK 729 Score = 225 bits (568), Expect = 7e-056 Identities = 121/254 (47%), Positives = 173/254 (67%), Gaps = 13/254 (5%) Frame = -2 Query: 4917 TQPTPTEESEEVTREQVLRRSSRTIRAPDRYSH--SLHYLLLIDEG----EPESFDEALQ 4756 TQ TP + + T + R R I P R++ S+ + L++ E EP+S+ EA++ Sbjct: 789 TQETP-KRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAME 847 Query: 4755 VEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR--RFKAHL 4582 +D KW++A DEM SL KN TW L D P ++ + +W+F++K+ G RFKA L Sbjct: 848 SQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARL 907 Query: 4581 VVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYM 4414 V KG DY EIF+PVVK SIRIL+ +V +++ LEQMD KT FLHGDL++E+YM Sbjct: 908 VAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYM 967 Query: 4413 QQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYT 4234 +QP+GFV E+ VC+L +SLYGLKQ+PRQW K+FD FM+ +F ++E D C Y K + Sbjct: 968 EQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVS 1027 Query: 4233 -NSYVFLLLYLDDMLIEGSSMRENNNL 4156 + +++LLLY+DDMLI G+S E N + Sbjct: 1028 EHDFIYLLLYVDDMLIAGASKAEINRV 1054 Score = 89.3 bits (218), Expect(2) = 2e-032 Identities = 47/129 (36%), Positives = 74/129 (56%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S + Q VA+ST EAEY+A A + +WIK L D G++ ++V I+CD+ S Sbjct: 1227 IGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQS 1286 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 AI + KN V H+RTKH+D+R +++RD VE G + + D T + F Sbjct: 1287 AICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKF--- 1343 Query: 87108 RLELGMMKI 87082 + LG++K+ Sbjct: 1344 KSALGVLKL 1352 Score = 88.9 bits (217), Expect(3) = 8e-030 Identities = 47/131 (35%), Positives = 73/131 (54%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ ++E R LL +S + +W E T YLINR S +++ + Sbjct: 593 YTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEE 652 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + N+ P Y +L+ FG + + ++ + K +PR FLGYP T GYKV +K Sbjct: 653 MWLNRKPGYKHLRKFGSIAY--VHQDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEEKCV 710 Query: 65343 VSRDVSFYENV 65375 +SR+V F E+V Sbjct: 711 ISRNVVFQESV 721 Score = 86.2 bits (210), Expect = 6e-014 Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 6/130 (4%) Frame = -3 Query: 4229 HMSFYSCIWMIC*LKDLV*GRTT------IWTRLSAAFEMKDLGPAKQILGMKISRDRSA 4068 H+S + I+++ + D++ + + +LS FEMKD+G A +ILG+ I RDR Sbjct: 1025 HVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKG 1084 Query: 4067 CTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLSKEQSPKTVEERNHMALVPYALAI 3888 L LSQE+YI KVL RF ++ AK P+ HFKL+ + + +E +VPY+ A+ Sbjct: 1085 GVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLA---AVREEDECVDTDVVPYSSAV 1141 Query: 3887 CSLVSVMVCTRPDRLY 3840 S++ M+ TRPD Y Sbjct: 1142 GSIMYAMLGTRPDLAY 1157 Score = 81.5 bits (198), Expect = 2e-012 Identities = 74/241 (30%), Positives = 106/241 (43%), Gaps = 13/241 (5%) Frame = -2 Query: 88596 LIFQEEVRESKQQ----WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXX 88429 L+F E + ++Q W +DS C+ HMT + F+S +E Sbjct: 291 LVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQE-KGNTTILLGDDHSVESQGQ 349 Query: 88428 XXGRSDEHS-----IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVE--VINLNTQKL 88270 R D H ++ V YV L NL+S L +K+ +R G E V K Sbjct: 350 GTIRIDTHGGTIKILENVKYVPHLRRNLISTGTL----DKLGYRHEGGEGKVRYFKNNKT 405 Query: 88269 VLIGKRDKHIYTVDTSTIYDKKLVCLSVLEK-DPLLWHKRLRHASQVQLNKLITKDLVIG 88093 L G +Y +D ST+ + +C + +K LWH RL H S L L K L+ Sbjct: 406 ALRGSLSNGLYVLDGSTVMSE--LCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLI-- 461 Query: 88092 LPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYV 87916 + + E + CE C +GK K SF + S +L +H DL G P S K Y Sbjct: 462 -DRKEINELEFCEHCVMGKSKKVSFNVGKHTSED-ALSYVHADLWGSPNVTPSISGKQYF 519 Query: 87915 FVLVDDYTRNT*RY 87874 ++DD TR Y Sbjct: 520 LSIIDDKTRKVWLY 533 Score = 79.2 bits (192), Expect(2) = 2e-032 Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 6/130 (4%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQKLYRGMIGSLLY 87705 + Q+ Y++++L RF M AK + P+ KL + E + + V Y +GS++Y Sbjct: 1089 LSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVP--YSSAVGSIMY 1146 Query: 87704 -LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 + +RPD+ +++ L +R+ + P H +AVK ++ YLKG DL + + K +F + GY Sbjct: 1147 AMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYC 1206 Query: 87527 DVDYVGYLVDRKSTTG 87480 D +Y L R+S +G Sbjct: 1207 DSNYAADLDRRRSISG 1222 Score = 65.2 bits (156), Expect(3) = 8e-030 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIVDDFSR 64791 FC HC+ G+ + F + TS + + DLW P + +G +YFL I+DD +R Sbjct: 471 FCEHCVM-GKSKKVSFNVGKHTSEDAL-SYVHADLWGSPNVTPSISGKQYFLSIIDDKTR 528 Query: 64792 STWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 W L K T + SLV NQ +K +RT NGLEF + + Y K+ Sbjct: 529 KVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKE 582 Score = 26.2 bits (56), Expect(3) = 8e-030 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMK 64573 LWH+RLGH+S +K Sbjct: 439 LWHSRLGHMSMNNLK 453 >dbj|BAA88531.1| (AP000969) Similar to copia-type pol polyprotein. (AF105716) [Oryza sativa] Length = 940 Score = 163 bits (409), Expect(2) = 3e-076 Identities = 81/133 (60%), Positives = 100/133 (74%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 GT+I Q KY+K++LK+F M++AK I TP+ LDL G V+QK+YR +IGSLLYL Sbjct: 671 GTFICQTKYLKDMLKKFGMENAKPIHTPMPSNGHLDLNEQGKDVDQKVYRSIIGSLLYLC 730 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 ASRPDI+ SV +CARFQ PKE H+ AVKRIL YL T +LG+WY KG+ FDL+GYAD D Sbjct: 731 ASRPDIMLSVCMCARFQAAPKECHLVAVKRILRYLVHTPNLGLWYPKGARFDLIGYADAD 790 Query: 87518 YVGYLVDRKSTTG 87480 Y G VDRKST+G Sbjct: 791 YAGCKVDRKSTSG 803 Score = 151 bits (378), Expect(2) = 3e-076 Identities = 70/128 (54%), Positives = 91/128 (70%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FLG L+S SKKQNSVALSTAEAEY++ CCAQ++W+KQ L D+GL + ++P+ CDN Sbjct: 807 FLGRSLVSWSSKKQNSVALSTAEAEYISTGSCCAQLIWMKQTLRDYGLNVSKIPLLCDNE 866 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI I N VQH RTKH+DIRHHFLRD+ +G I + +++Q+ADIFT L F Sbjct: 867 SAIKIANNPVQHSRTKHIDIRHHFLRDHSTRGDIDIQHVRIDKQLADIFTKPLDEARFCE 926 Query: 87111 NRLELGMM 87088 R EL ++ Sbjct: 927 LRSELNIL 934 Score = 133 bits (332), Expect = 3e-028 Identities = 86/253 (33%), Positives = 130/253 (50%), Gaps = 7/253 (2%) Frame = -3 Query: 5777 LCESCVMGKQ-------KRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFI 5619 +C +C GKQ K V T P L++ H D++GP S+GG+++ + + Sbjct: 55 VCSACQAGKQIGAHHPVKNVMTTTRP-------LELLHMDLFGPIAYLSIGGNKYGLVIV 107 Query: 5618 YDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAK 5439 DFS WV+FL S+ A FKK+ +N+ LK+K +RSDN E+ + +F + Sbjct: 108 DDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVKEFKNTCIESFLDEE 167 Query: 5438 GIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSV 5259 GI+ + P +QNG+ ER N+ L E AR+M FWA V+TV + INR Sbjct: 168 GIKHEFSAPYSPQQNGVAERKNRTLIEIARTMLDEYKTSDRFWAEAVNTVCHDINRLYLH 227 Query: 5258 PLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYR 5079 L K E+ + S+ R FG Y+ + +K K +L+GYGSN YR Sbjct: 228 RLLKKTPYELLTGNKPNVSYFRVFGSKCYILNKKARSSKFAPKVDGGFLLGYGSNECAYR 287 Query: 5078 FWDDKNRKILRHCDVTFDES 5019 ++ + + DVTFDE+ Sbjct: 288 VFNKTSGIVEIAPDVTFDET 307 Score = 126 bits (313), Expect(2) = 2e-033 Identities = 74/198 (37%), Positives = 114/198 (57%), Gaps = 5/198 (2%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP +EAL D W +AM +E+ + +N+ W L + + + + KW+FR K G Sbjct: 431 EPLRVEEALNDPD---WVMAMQEELNNFTRNEVWTLVER-SRQNVIGTKWIFRNKQDEAG 486 Query: 4605 KR-RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R KA LV +G D+ E F+PV +L SIRILL + N L QMD K+ FL+ Sbjct: 487 VVIRNKARLVAQGFTQIEGLDFGETFAPVARLESIRILLTFATNLNFKLYQMDVKSAFLN 546 Query: 4440 GDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKD 4261 G +++ +Y++QP GF P + V KL ++LY LKQAPR WY+ +F+ K+ F + D Sbjct: 547 GLINELVYVEQPPGFKDPKYPNHVYKLHKALYELKQAPRAWYECLRNFLVKNGFEIGKAD 606 Query: 4260 PCCYFKKYTNSYVFLLLYLDDML 4192 + K++ N +Y+DD++ Sbjct: 607 STLFTKRHDNDIFVCQIYVDDII 629 Score = 80.8 bits (196), Expect(2) = 9e-027 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ QQNG ERK++ L+E+AR +L + K R+W E + T + INRL L K ++ Sbjct: 177 YSPQQNGVAERKNRTLIEIARTMLDEYKTSDRFWAEAVNTVCHDINRLYLHRLLKKTPYE 236 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLN--SHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 +L P SY +VFG C+ LN + KF P+ LGY N Y+V + ++ Sbjct: 237 LLTGNKPNVSYFRVFGSKCY-ILNKKARSSKFAPKVDGGFLLGYGSNECAYRVFNKTSGI 295 Query: 65337 IHVSRDVSFYE 65369 + ++ DV+F E Sbjct: 296 VEIAPDVTFDE 306 Score = 69.1 bits (166), Expect(2) = 9e-027 Identities = 43/109 (39%), Positives = 56/109 (50%) Frame = +1 Query: 64594 ILLTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMI 64773 I K C C + QI P+KN ++ R +LL +DL+ P L+ G KY L+I Sbjct: 48 IQFEKDRVCSACQAGKQIGAH-HPVKNVMTTTRPLELLHMDLFGPIAYLSIGGNKYGLVI 106 Query: 64774 VDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 VDDFS TW L KS T K F N+F + IK+IR+ N EF Sbjct: 107 VDDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVKEF 155 Score = 60.9 bits (145), Expect = 3e-006 Identities = 29/70 (41%), Positives = 45/70 (63%) Frame = -2 Query: 88101 VIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKI 87922 ++GL +F++D+VC AC GK I + K ++++T LEL+HMDL GP+ S G Sbjct: 42 ILGLTNIQFEKDRVCSACQAGKQIGAHHPVKNVMTTTRPLELLHMDLFGPIAYLSIGGNK 101 Query: 87921 YVFVLVDDYT 87892 Y V+VDD++ Sbjct: 102 YGLVIVDDFS 111 Score = 46.1 bits (107), Expect(2) = 2e-033 Identities = 26/98 (26%), Positives = 56/98 (56%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM +G K LG++I + + + Q Y++ +L +F + +AKP TP+ ++ Sbjct: 645 MTKRFEMSMMGELKFFLGLQIKQLKEGTFI--CQTKYLKDMLKKFGMENAKPIHTPMPSN 702 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICS-----LVSVMVCTR 3855 L + K V+++ + +++ L +C+ ++SV +C R Sbjct: 703 GHLDLNEQGKDVDQKVYRSIIGSLLYLCASRPDIMLSVCMCAR 745 >gb|AAC49502.1| (U68408) 5' end not determined experimentally [Zea mays] Length = 1068 Score = 170 bits (427), Expect = 2e-039 Identities = 119/405 (29%), Positives = 200/405 (49%), Gaps = 19/405 (4%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGK--VYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGI 6060 +H + K++F ++ + + D +++G G + I N+ ++ +V + + Sbjct: 19 NHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAIS----NEHSISNVFLVESL 74 Query: 6059 KKNLISVGQFDSTGYAAVFGKGSWKIVKGV--IVVARGTNSGTLYTT-----LGCINMDV 5901 NL+SV Q + GY +F + + + +G G LY ++ + Sbjct: 75 GYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAGLDACL 134 Query: 5900 VAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGL---CESCVMGKQ------ 5748 +A++ G LWH RL H+ K + L+ + GL + C +C GKQ Sbjct: 135 IAKTSMG-WLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVGGSHH 193 Query: 5747 -KRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNS 5571 K V T P L+M H D++GP S+GGS++ + + DFSR WV+FL+ S Sbjct: 194 TKNVMTTSRP-------LEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKS 246 Query: 5570 DVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNG 5391 + T K++ +N+ LKVK++RSDNG E+ F +GI+ + P +QNG Sbjct: 247 ETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNG 306 Query: 5390 IDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKEL 5211 + ER N+ L + AR+M P+ FW V+T + INR + E+ + Sbjct: 307 VVERKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYELLTGNKP 366 Query: 5210 KYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVT 5031 S+ R FG Y+ V + +K KAV+ +L+GY SN YR ++ + + DV Sbjct: 367 NVSYFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSGDVV 426 Query: 5030 FDES 5019 FDE+ Sbjct: 427 FDET 430 Score = 161 bits (404), Expect(2) = 4e-076 Identities = 82/133 (61%), Positives = 96/133 (71%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 GT+I Q KY ++LLKRF M DAK TP+ DL G +V+QK YR MIGSLLYL Sbjct: 799 GTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLYLC 858 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 ASRPDI+ SV +CARFQ++PKE H+ AVKRIL YL T G+WY KGS FDLVGY+D D Sbjct: 859 ASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWYPKGSTFDLVGYSDSD 918 Query: 87518 YVGYLVDRKSTTG 87480 Y G VDRKST+G Sbjct: 919 YAGCKVDRKSTSG 931 Score = 153 bits (382), Expect(2) = 4e-076 Identities = 74/128 (57%), Positives = 93/128 (71%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FLG L+S SKKQ SVALSTAEAEYVAA CCAQ+LW++Q L DFG + +VP+ CDN Sbjct: 935 FLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNE 994 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + +N V+H RTKH+DIRHHFLRD+ +KG I + + E Q+ADIFT L + F R Sbjct: 995 SAIRMAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCR 1054 Query: 87111 NRLELGMM 87088 R EL ++ Sbjct: 1055 LRSELNVL 1062 Score = 145 bits (361), Expect(2) = 2e-039 Identities = 89/262 (33%), Positives = 138/262 (51%), Gaps = 10/262 (3%) Frame = -2 Query: 4929 VEADTQPTPTEESEEVTR-----EQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDE 4765 +E + QP P + + + +Q+L S+ + R + + + EP +E Sbjct: 506 LEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHNSFVSSIEPFRVEE 565 Query: 4764 ALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKA 4588 AL D W LAM +E+ + ++N+ W L P + + KWVFR K G R KA Sbjct: 566 ALLDPD---WVLAMQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQDERGVVTRNKA 621 Query: 4587 HLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEI 4420 LV KG A D+ E F+PV +L SIRILL A + L QMD K+ FL+G + +E+ Sbjct: 622 RLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKSAFLNGPIKEEV 681 Query: 4419 YMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKK 4240 Y++QP GF VCKL+++LYGLKQAPR WY+ F+ + F + DP + K Sbjct: 682 YVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGKADPTLFTKT 741 Query: 4239 YTNSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 +Y+DD++ ++ + +V+ Sbjct: 742 CDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVM 773 Score = 130 bits (324), Expect = 3e-027 Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 2/225 (0%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSL--EEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYY 88384 W +DS C+ HMTG K +F S + S+EHSI V+ Sbjct: 11 WIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVFL 70 Query: 88383 VKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKK 88204 V+ L +NLLS+SQLC+ +F + V V L G D +Y VD + Sbjct: 71 VESLGYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAGL 130 Query: 88203 LVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKS 88024 CL LWH+RL H L+KL+ + VIGL +F++D+ C AC GK + Sbjct: 131 DACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVGG 190 Query: 88023 SFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 S +K +++++ LE++HMDL GP+ S G Y V+VDD++R T Sbjct: 191 SHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFT 237 Score = 86.2 bits (210), Expect(3) = 1e-031 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VERK++ L+++AR +L + K P +W E + T + INR+ + ++ Sbjct: 300 YTPQQNGVVERKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYE 359 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKD-KFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 +L P SY +VFG C+ + ++ KF P+ LGY NT Y+V + S+ + Sbjct: 360 LLTGNKPNVSYFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLV 419 Query: 65340 HVSRDVSFYE 65369 VS DV F E Sbjct: 420 EVSGDVVFDE 429 Score = 73.7 bits (178), Expect(3) = 1e-031 Identities = 38/96 (39%), Positives = 59/96 (60%) Frame = +1 Query: 64669 KNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKS 64848 KN +++R ++L +DL+ P L+ G KY L+IVDDFSR TW L KS T T+K Sbjct: 195 KNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQGTLKR 254 Query: 64849 FVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 F+ N+F + +K IR+ NG EF + + +L+++ Sbjct: 255 FLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEE 290 Score = 47.3 bits (110), Expect(2) = 2e-039 Identities = 26/98 (26%), Positives = 52/98 (52%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM +G LG ++ + + + SQ Y + +L RF + DAKP TP+ Sbjct: 773 MTQKFEMSMMGELNYFLGFQVKQLKDGTFI--SQTKYTQDLLKRFGMKDAKPAKTPMGTD 830 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICS-----LVSVMVCTR 3855 + K+V+++ + +++ L +C+ ++SV +C R Sbjct: 831 GHTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCAR 873 Score = 26.2 bits (56), Expect(3) = 1e-031 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 64490 LMSCMSHGNSTDYLWHNRLGHVSFIKMKGISSIH 64591 L +C+ S +LWH RL HV G+ ++H Sbjct: 130 LDACLIAKTSMGWLWHRRLAHV------GMKNLH 157 >dbj|BAB03384.1| (AP002538) Similar to Zea mays retrotransposon Opie-2 (T04112) [Oryza sativa] Length = 1410 Score = 161 bits (404), Expect(2) = 1e-075 Identities = 80/128 (62%), Positives = 96/128 (74%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FLG+ L+S S+KQ+SVA STAEAEYVAAA C+QVLW+ L D+GL VP+ CDNT Sbjct: 1277 FLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNT 1336 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAINI KN VQH RTKH++IR+HFLRDNVEKG I + F E+Q+ADIFT L R FE Sbjct: 1337 SAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEF 1396 Query: 87111 NRLELGMM 87088 R ELG++ Sbjct: 1397 LRSELGVI 1404 Score = 151 bits (378), Expect(2) = 1e-075 Identities = 75/139 (53%), Positives = 94/139 (66%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 T G ++HQ KY KELLK+F M D K I TP+A + L + G V+Q+ YR MIGSLL Sbjct: 1138 TKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLL 1197 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YLTASRPDI FSV LCARFQ +P+ SH QAVKRI Y+K T + G+WY S + ++ Sbjct: 1198 YLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFS 1257 Query: 87527 DVDYVGYLVDRKSTTGMTH 87471 D D+ G +DRKST+G H Sbjct: 1258 DADFAGCKIDRKSTSGTCH 1276 Score = 145 bits (361), Expect = 1e-031 Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 24/371 (6%) Frame = -3 Query: 6131 GDVCIKTTLR--NQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKG----V 5970 G V K T++ ++ L DV + +K NL+SV Q F K +++ V Sbjct: 406 GRVMAKGTIKVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV 465 Query: 5969 IVVARGTNSGTLYTTLGCINMDVVAESVSGSCL----------WHNRLGHMSAKGMKMLV 5820 ++R G ++ N D A S CL WH RLGH+ + + Sbjct: 466 FDISR---VGRVFFA----NFDSSAPGPS-RCLVASENRDLFFWHRRLGHIGFDHLSRIS 517 Query: 5819 AKGALEGLKSFDMG---LCESCVMGKQKRVSFTKTPREP*KVLL-----KMTHTDVWGPS 5664 + GL +C C GK T + +P +++ ++ H + GP+ Sbjct: 518 GMDLIRGLPKLKAPKDLVCAPCRHGKM-----TSSSHKPVTMVMTDGPGQLLHMNTVGPA 572 Query: 5663 PVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNG 5484 V S+GG + + + DFSR WVYFL+ + F F+ + + ++ +RSDNG Sbjct: 573 RVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNG 632 Query: 5483 GEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWAN 5304 E+ S F +FC + G+ + P +QNG+ ER N+ L E AR+M P+ FW Sbjct: 633 SEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTE 692 Query: 5303 VVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAV 5124 +S ++ NR + K E+ + K SHLR FGC +V + +K +++ Sbjct: 693 AISAACFISNRVFLRTILHKTPYELRFGRRPKVSHLRVFGCKCFV-LKSGNLDKFESRSL 751 Query: 5123 KCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 +GY ++ YR + KI+ C+VTFDE+ Sbjct: 752 DGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEA 786 Score = 139 bits (347), Expect(2) = 2e-036 Identities = 79/203 (38%), Positives = 120/203 (58%), Gaps = 5/203 (2%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP++ AL E+ W AM +E+ + E+N W L + P G + KWVF+ K DG Sbjct: 900 EPKNVCHALSDEN---WVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDG 956 Query: 4605 KR-RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R KA LV +G D+ E F+PV +L +IRILL AS+ L QMD K+ FL+ Sbjct: 957 SIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLN 1016 Query: 4440 GDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKD 4261 G +++E+Y++QP GF P + V KL ++LYGLKQAPR WY++ +F+ ++ F D Sbjct: 1017 GVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVD 1076 Query: 4260 PCCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 + ++ + +Y+DD++ GSS Sbjct: 1077 KTLFTLHSGIDFLLVQIYVDDIIFGGSS 1104 Score = 120 bits (299), Expect = 2e-024 Identities = 74/223 (33%), Positives = 108/223 (48%), Gaps = 1/223 (0%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGR-SDEHSIDKVYYV 88381 W +DS CSRHMTG F SL + +D+ + V V Sbjct: 369 WLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKDVALV 428 Query: 88380 KGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKL 88201 L +NLLS+SQLCD+ +V F+ V++ + + I + + + S+ Sbjct: 429 SKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVFDISRVGRVFFANFDSSAPGPSR 488 Query: 88200 VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSS 88021 ++ +D WH+RL H L+++ DL+ GLPK K +D VC C GK SS Sbjct: 489 CLVASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKAPKDLVCAPCRHGKMTSSS 548 Query: 88020 FKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 K MV + +L+HM+ GP RVQS G K YV V+VDD++R Sbjct: 549 HKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDFSR 592 Score = 98.7 bits (242), Expect = 1e-017 Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%) Frame = -1 Query: 90307 MEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKMLGKNAKAKCILVC 90128 ME ++Q++ + +W ++ +P D A+ + N +A+ ++ Sbjct: 1 MEAYLQSQGHNVWNKVKSPYTVPDDAD------------ITPANMAQVDFNYRARNAIIG 48 Query: 90127 GLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQDMI 89948 G+ EFNR+ SA +W L N HEG ++ + EY+ F+M G+S+ Sbjct: 49 GISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEYQRFEMHPGESIDSYF 108 Query: 89947 TRFTTVINELISLGKVYTTEEQVDKVLRIFPRS-WEIKVTAIREAKDLTNMTLDELVRNL 89771 RF ++++L S+GK ++ + +L WE+KVT+I E+ L+++T+D+L L Sbjct: 109 KRFGEIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESAPLSDLTMDKLYSKL 168 Query: 89770 KTYEMNVDKR 89741 KT+EM+V R Sbjct: 169 KTHEMDVFHR 178 Score = 97.1 bits (238), Expect(2) = 3e-025 Identities = 48/126 (38%), Positives = 77/126 (61%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG VERK++ L+E+AR +L + P ++W E I ++ NR+ + +K +++ + Sbjct: 660 QQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRF 719 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVSR 65351 + P S+L+VFGC CF + + DKFE R+ IFLGY ++ Y+V ST KI + Sbjct: 720 GRRPKVSHLRVFGCKCFVLKSGNLDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETC 779 Query: 65352 DVSFYE 65369 +V+F E Sbjct: 780 EVTFDE 785 Score = 47.6 bits (111), Expect(2) = 3e-025 Identities = 30/105 (28%), Positives = 48/105 (45%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 K C C HG++ + ++ LL ++ P V + G Y L++VDDF Sbjct: 532 KDLVCAPC-RHGKMTSSSHKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDF 590 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 SR +W L K T +S + +F +++IR+ NG EF Sbjct: 591 SRYSWVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEF 635 Score = 43.0 bits (99), Expect(2) = 2e-036 Identities = 26/98 (26%), Positives = 52/98 (52%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 +S FEM +G LG++I + + ++ Q Y +++L +F + D KP TP+A Sbjct: 1115 MSREFEMSMMGELTFFLGLQIKQTKEGIFVH--QTKYSKELLKKFDMADCKPIATPMATT 1172 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSL-----VSVMVCTR 3855 L ++ + V++R + +++ L + + SV +C R Sbjct: 1173 SSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCAR 1215 >gb|AAD20307.1| (AF105716) copia-type pol polyprotein [Zea mays] Length = 1063 Score = 170 bits (426), Expect = 3e-039 Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 21/375 (5%) Frame = -3 Query: 6143 IEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIV 5964 ++G G + I ++ +V + + NL+SV Q GY +F GV V Sbjct: 31 VKGLGKIAISP----DHSISNVFLVDSLDYNLLSVSQLCQMGYNCLFTD------IGVTV 80 Query: 5963 VARGTNS----GTLYTTLGCINMD-------VVAESVSGSCLWHNRLGHMSAKGMKMLVA 5817 R +S G L L ++ D ++A++ G LWH RL H+ K + L+ Sbjct: 81 FRRSDDSIAFKGVLEGQLYLVDFDRAELDTCLIAKTNMG-WLWHRRLAHVGMKNLHKLLK 139 Query: 5816 KGALEGLKSFDMG---LCESCVMGKQ-------KRVSFTKTPREP*KVLLKMTHTDVWGP 5667 + GL + +C +C GKQ K + T P L++ H D++GP Sbjct: 140 GEHILGLTNVHFEKDRICSACQAGKQVGTHHPHKNIMTTDRP-------LELLHMDLFGP 192 Query: 5666 SPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDN 5487 S+GGS++ + + D+SR WV+FL+ S T K + +N+ L++K++RSDN Sbjct: 193 IAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDN 252 Query: 5486 GGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWA 5307 G E+ S +F +GI+ + P +QNG+ ER N+ L + AR+M P FWA Sbjct: 253 GTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWA 312 Query: 5306 NVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKA 5127 V+T Y INR + K E+ K+ S+ R FG ++ + +++K K Sbjct: 313 EAVNTACYAINRLYLHRILKKTSYELLTGKKPNISYFRVFGSKCFILIKRGRKSKFAPKT 372 Query: 5126 VKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 V+ +L+GY SN YR ++ + CDV FDE+ Sbjct: 373 VEGFLLGYDSNTRAYRVFNKSTGLVEVSCDVVFDET 408 Score = 159 bits (398), Expect(2) = 5e-075 Identities = 77/133 (57%), Positives = 100/133 (74%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 GT+I Q KY +++L +F M DAK I TP+ LDL+ G +V+QK+YR MIGSLLYL Sbjct: 793 GTFICQTKYTQDILTKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLC 852 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 ASRPDI+ SV +CARFQ++PKESH+ AVKRIL YL T G+WY +GS FDL+GY+D D Sbjct: 853 ASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDAD 912 Query: 87518 YVGYLVDRKSTTG 87480 + G ++RKST+G Sbjct: 913 WAGCKINRKSTSG 925 Score = 152 bits (379), Expect(2) = 5e-075 Identities = 71/128 (55%), Positives = 95/128 (73%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FLG L+S SKKQNSVALSTAEAEY+AA CCAQ+LW++Q L D+G K+ +VP+ CDN Sbjct: 929 FLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLLDYGYKLTKVPLLCDNE 988 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + N V+H RTKH+ IR+HFLRD+ +KG I +++ ++Q+ADIFT L + F R Sbjct: 989 SAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTR 1048 Query: 87111 NRLELGMM 87088 R EL ++ Sbjct: 1049 LRHELNIL 1056 Score = 134 bits (335), Expect(2) = 1e-036 Identities = 79/228 (34%), Positives = 121/228 (52%), Gaps = 5/228 (2%) Frame = -2 Query: 4875 EQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEK 4696 + +L + + R +H + + EP +EALQ D W +AM +E+ + + Sbjct: 523 DTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSD---WVVAMQEELNNFTR 579 Query: 4695 NDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT----DYAEIFSPVV 4531 N+ W L P + + KWVFR K G R KA LV KG + D+ E ++PV Sbjct: 580 NEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVA 638 Query: 4530 KLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRS 4351 +L SIRILL L QMD K+ FL+G + +E+Y++QP GF + V +L+++ Sbjct: 639 RLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKA 698 Query: 4350 LYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDML 4192 LYGLKQAPR WY+ F+ + F + DP + K N +Y+DD++ Sbjct: 699 LYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDII 751 Score = 115 bits (286), Expect = 8e-023 Identities = 63/178 (35%), Positives = 98/178 (54%), Gaps = 2/178 (1%) Frame = -2 Query: 88416 SDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIY 88237 S +HSI V+ V L +NLLS+SQLC +F GV V + + G + +Y Sbjct: 40 SPDHSISNVFLVDSLDYNLLSVSQLCQMGYNCLFTDIGVTVFRRSDDSIAFKGVLEGQLY 99 Query: 88236 TVDTSTIYDKKLVCLSVLEKDPL--LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDK 88063 VD +D+ + ++ K + LWH+RL H L+KL+ + ++GL F++D+ Sbjct: 100 LVD----FDRAELDTCLIAKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDR 155 Query: 88062 VCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 +C AC GK + + K ++++ LEL+HMDL GP+ S G Y V+VDDY+R T Sbjct: 156 ICSACQAGKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFT 215 Score = 103 bits (255), Expect(2) = 2e-037 Identities = 56/129 (43%), Positives = 75/129 (57%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VERK++ LL++AR +L + K P R+W E + T Y INRL + K ++ Sbjct: 278 YTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYE 337 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTL-NSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 +L K P SY +VFG CF + K KF P+T LGY NT Y+V + ST + Sbjct: 338 LLTGKKPNISYFRVFGSKCFILIKRGRKSKFAPKTVEGFLLGYDSNTRAYRVFNKSTGLV 397 Query: 65340 HVSRDVSFYE 65369 VS DV F E Sbjct: 398 EVSCDVVFDE 407 Score = 81.5 bits (198), Expect(2) = 2e-037 Identities = 47/133 (35%), Positives = 74/133 (55%) Frame = +1 Query: 64558 LYQNERNLLYSYILLTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHV 64737 L + E L + + K C C + Q+ T P KN +++R +LL +DL+ P Sbjct: 137 LLKGEHILGLTNVHFEKDRICSACQAGKQVGTH-HPHKNIMTTDRPLELLHMDLFGPIAY 195 Query: 64738 LTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLE 64917 ++ G KY L+IVDD+SR TW L KS T +T+K F+ N+F + IK IR+ NG E Sbjct: 196 ISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTE 255 Query: 64918 FISHETNIYLKKK 64956 F + + +L+++ Sbjct: 256 FKNSQIESFLEEE 268 Score = 48.4 bits (113), Expect(2) = 1e-036 Identities = 26/98 (26%), Positives = 55/98 (55%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM +G K LG ++ + + + Q Y + +L++F + DAKP TP+ + Sbjct: 767 MTQKFEMSMMGELKYFLGFQVKQLQEGTFI--CQTKYTQDILTKFGMKDAKPIKTPMGTN 824 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICS-----LVSVMVCTR 3855 L + K+V+++ + +++ L +C+ ++SV +C R Sbjct: 825 GHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCAR 867 >gb|AAG13508.1|AC068924_13 (AC068924) putative gag-pol polyprotein; 99986-95160 [Oryza sativa] Length = 1608 Score = 252 bits (636), Expect(2) = 6e-073 Identities = 179/618 (28%), Positives = 295/618 (46%), Gaps = 7/618 (1%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE+ +MS GLT P ++ L +L + ++ +Y + H ++R Sbjct: 756 YEYKVMSFGLTGA-PATFL---SAMNETLSPVLRKFALVFFDDILIYSPTLELHLQHVRT 811 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 VLQ L + K SKC F + +++ GHV+ G+ DP KI+ + W +PT++ ++ Sbjct: 812 VLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRG 871 Query: 39118 FVGLVSYYRRFVEGF---STSATHLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVE 38948 F+GL YYR+FV F S T L + + F W + + +F +LK+ + +AP+L L Sbjct: 872 FLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIESAFQQLKQALVAAPVLALPDF 931 Query: 38947 GGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHY 38768 FTI DAS VG+ VL ++ I Y+SR L T + E I+ A+ WR Y Sbjct: 932 SKHFTIETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPY 991 Query: 38767 LYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ 38588 L ++ TDH SL + QR + L I Y G N A +LSR+ Sbjct: 992 LQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRR- 1050 Query: 38587 *VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED* 38408 E P++ ++ + C + S + + +G+Q + Sbjct: 1051 ------------ESPIS-EVAAISEC-----------------IPSWMQELMQGYQLDGQ 1080 Query: 38407 ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAK 38228 + L + ++ + + G+LK+ G+I V +++E H H G Sbjct: 1081 SKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPV 1140 Query: 38227 MYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFV 38048 YR ++ + W GM+ I + + C Q K + R G + L + W I++DF+ Sbjct: 1141 TYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFI 1200 Query: 38047 AGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDR 37868 GLP++S + I V+VD+ +K +HF+P+ F+ +A+ ++ + + HG+P +IISDR Sbjct: 1201 EGLPRSSH-YNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDR 1259 Query: 37867 GSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFS 37688 FTS F + GT + +S+A+HPQ+D Q+E Q LE L V + + Sbjct: 1260 DKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWL 1319 Query: 37687 PLAQFAYNSIFHSNIQMVLFVALYG 37613 LA+F YN+ FHS + F LYG Sbjct: 1320 YLAEFWYNTSFHSTLNKTPFEVLYG 1344 Score = 237 bits (599), Expect(2) = 2e-072 Identities = 118/277 (42%), Positives = 168/277 (60%) Frame = +2 Query: 56417 RPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQ 56596 +P+++ PYR PA E++ Q+ E+L G I+PS++P+ + L VKKKD ++R+CI+YRQ Sbjct: 638 KPVNLRPYRYKPALKDEIERQVAEMLRSGVIQPSSSPFSSPALLVKKKDGTWRLCIDYRQ 697 Query: 56597 LNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYE 56776 LN VT+K+KY +P ID+ D + G+ FSK+DL +GY Q+++ + KTAF T GHYE Sbjct: 698 LNDVTVKSKYPVPVIDELLDELAGSKWFSKLDLRAGYHQIRMAEGDEYKTAFQTHSGHYE 757 Query: 56777 FLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXX 56956 + V SFGL APA F+ MN P L F +VF DDILIYS + + Sbjct: 758 YKVMSFGLTGAPATFLSAMNETLSPVLRKFALVFFDDILIYSPTLELHLQHVRTVLQLLS 817 Query: 56957 XKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLAS 57136 K KC F +S+LGHV+ GV D +KI+ V W +PT + + F+GLA Sbjct: 818 AHQWKVKLSKCSFAQQEISYLGHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRGFLGLAG 877 Query: 57137 YYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YYR+F+ F I+ LT L K+ +PF W+ E E +FQ Sbjct: 878 YYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIESAFQ 914 Score = 110 bits (272), Expect = 3e-021 Identities = 56/159 (35%), Positives = 93/159 (58%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 +P + I++D + L R+ ++ I V+V++ +K +HF+P+ +N +A+ +++ I Sbjct: 1187 VPAGAWQTISLDFIEGLPRS-SHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNI 1245 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 +LHG+ +IISDR F S FW + + GT + +S+ +HPQ+D Q+E + Q LE L Sbjct: 1246 YKLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLR 1305 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 V + W +L L EF YN S+H + PFE LYG Sbjct: 1306 CFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYG 1344 Score = 96.3 bits (236), Expect(2) = 2e-038 Identities = 54/139 (38%), Positives = 87/139 (61%), Gaps = 3/139 (2%) Frame = +2 Query: 67628 CLAYMAHIGDTSVETNMLESIL-VVSEFLEVF--PTDLPDVPPDSDIDFYIDVDLGTKPI 67798 CL ++ ++ +T T + E + +++EF E+F PT+LP P + D +I + G KP+ Sbjct: 585 CLVHL-NVAETLTATTVPEIVQPILNEFQEIFSEPTELP---PKRNCDHHIPLVEGAKPV 640 Query: 67799 FVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNK 67978 + PYR PA E++ Q+ ++L I+ S S + +P L VK+KD +CIDYRQLN Sbjct: 641 NLRPYRYKPALKDEIERQVAEMLRSGVIQPSSSPFSSPALLVKKKDGTWRLCIDYRQLND 700 Query: 67979 ITIIN*YPIPRIDDLFD*LQGA 68044 +T+ + YP+P ID+L D L G+ Sbjct: 701 VTVKSKYPVPVIDELLDELAGS 722 Score = 92.8 bits (227), Expect(2) = 2e-038 Identities = 73/209 (34%), Positives = 100/209 (46%), Gaps = 10/209 (4%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 +AG FSK+DLR+ YHQ+++ E D KTAFQT GHYE+ VM F LT A ATF+ MN Sbjct: 719 LAGSKWFSKLDLRAGYHQIRMAEGDEYKTAFQTHSGHYEYKVMSFGLTGAPATFLSAMNE 778 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEI---WLSVQ 68382 E H H+RTV +L + K SKC +S Sbjct: 779 TLSPVLRKFALVFFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYL 838 Query: 68383 RRYHGGSEKD*DN*RLD*TCF--SYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT* 68541 G + D ++ + +K LR L+ Y F I+ LT+L Sbjct: 839 GHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLK 898 Query: 68542 KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVV 68658 K + F W+ E E +FQ+LK L A +L LP + F + Sbjct: 899 KGIPFKWTPEIESAFQQLKQALVAAPVLALPDFSKHFTI 937 Score = 79.6 bits (193), Expect = 6e-012 Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 6/230 (2%) Frame = +2 Query: 68336 SFTRSFQSVRFGLVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SM 68500 SF + S ++ + DP KI+ + W +P ++ ++ FLGLAGYYR+ + Sbjct: 829 SFAQQEISYLGHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGL 888 Query: 68501 ISYPXXXXXXXXXXXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIG 68680 IS P + + S K + + +L + + + DAS +G Sbjct: 889 ISKPLTQLLKKGIPFK-WTPEIESAFQQLKQALVAAPVLALPDFS--KHFTIETDASDVG 945 Query: 68681 LGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRS 68860 +G VL Q+ +AY SR L + ++ E + ++ A++ W YL F + T+H S Sbjct: 946 IGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHS 1005 Query: 68861 LQYIFNQR-DLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAML 69025 L ++ QR +++ + +LL I Y G +N ADALS + + +A + Sbjct: 1006 LMHLTEQRLHTPWQQKAFTKLL-GLQYKICYRKGVSNAAADALSRRESPISEVAAI 1060 Score = 65.2 bits (156), Expect(2) = 2e-072 Identities = 39/125 (31%), Positives = 63/125 (50%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F + D S G+GAVL E++ I Y SR L T++ + A++ A++ WR YL Sbjct: 934 HFTIETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQ 993 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGS 57663 + + TDH SL ++ Q+ +++ L I Y G +N ADALSR+ Sbjct: 994 QGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESP 1053 Query: 57664 MGSLA 57678 + +A Sbjct: 1054 ISEVA 1058 Score = 52.3 bits (123), Expect(2) = 6e-073 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGR-WGKLSPRYIGPFE 37341 +Q L Q + + AD +R +F+V D ++L + P R KL+ RY GPF+ Sbjct: 1376 LQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQ 1435 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VS 37257 ++ G VAY + LP T S+IHPVF VS Sbjct: 1436 VMSRVGTVAYHIQLPAT-SSIHPVFHVS 1462 Score = 43.4 bits (100), Expect = 0.51 Identities = 25/85 (29%), Positives = 39/85 (45%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDF 58079 +GIL K ++ V L H ++ E H++ H G Y +K F W M+ I + Sbjct: 1102 QGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQ 1161 Query: 58080 VAQCPNCQQVKYEHQRPGGTLKRMP 58154 + C C Q K + R G L+ +P Sbjct: 1162 LQSCQVCLQAKPDRARYPGLLQPLP 1186 >gb|AAF18613.1|AC005171_1 (AC005171) putative retroelement integrase [Arabidopsis thaliana] Length = 1215 Score = 202 bits (508), Expect(2) = 2e-072 Identities = 112/272 (41%), Positives = 154/272 (56%) Frame = +2 Query: 56432 PPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVT 56611 P YR P E +EL+ Q KD S+RMC + R +N VT Sbjct: 449 PAYRTNPVETKELQRQ--------------------------KDGSWRMCFDCRAINNVT 482 Query: 56612 LKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKS 56791 +K + IP +DD D + G+ +FSKIDL SGY Q+++ + KTAF T+ G YE+LV Sbjct: 483 VKYCHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRMNEGDEWKTAFKTKHGLYEWLVMP 542 Query: 56792 FGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLY 56971 FGL +AP+ FM LMN + + ++ +FVIV+ DDIL+YS+S + + LY Sbjct: 543 FGLTHAPSTFMRLMNHVLRAFIGIFVIVYFDDILVYSESLREHIEHLDSVLNVLRKEELY 602 Query: 56972 AKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRF 57151 A KC FC ++ FLG VVS DGV VD K++A++ W P V +V SF GLA +YRRF Sbjct: 603 ANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGEVRSFHGLAGFYRRF 662 Query: 57152 I*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 FS+I LT + K++V F W EE+FQ Sbjct: 663 FKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQ 694 Score = 186 bits (468), Expect = 4e-044 Identities = 115/292 (39%), Positives = 162/292 (55%), Gaps = 7/292 (2%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE+L+M GLT H L + + Y+ +Y S EH +L Sbjct: 536 YEWLVMPFGLTHAPSTFMR----LMNHVLRAFIGIFVIVYFDDILVYSESLREHIEHLDS 591 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 VL LR + LYA KC F ++ F G VVS +G++VD K++AI W P +V EV S Sbjct: 592 VLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGEVRS 651 Query: 39118 FVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVE 38948 F GL +YRRF + FST T + +DV F W + +F LK+ +T+AP+L L Sbjct: 652 FHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPVLILSEF 711 Query: 38947 GGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHY 38768 F I CDASG+G+ VLM+ I + S +L LNYPT D EL +V AL W+HY Sbjct: 712 LKTFEIECDASGIGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQHY 771 Query: 38767 LYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRK 38591 L+ + +TDH SL+ + Q+ LN R RW+E ++ + I Y GK N+VA +LS++ Sbjct: 772 LWPKVFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVADALSQR 830 Score = 109 bits (270), Expect = 6e-021 Identities = 97/374 (25%), Positives = 165/374 (43%), Gaps = 6/374 (1%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +VS + + VD +K++ I+DW P +V ++ SF GLAG+YRR + Sbjct: 621 VVSADGVKVDEEKVKAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKD 680 Query: 68552 LSCGLTSVR------LVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 + + L K + L+L ++ + + DAS IG+G VLMQ K+ Sbjct: 681 VGFKWEKAQEEAFQSLKDKLTNAPVLILS----EFLKTFEIECDASGIGIGAVLMQDQKL 736 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 +A+ S +L Y +D EL +V AL+ W +YL+ F + T+H SL+++ Q+ L Sbjct: 737 IAFFSEKLGGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDHESLKHLKGQQKLN 796 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSN 69073 R W+E ++ + I Y GK NVVADALS + + +L +V+L+ Sbjct: 797 KRHARWVEFIETFAYVIKYKKGKDNVVADALSQRYTLLSTL------------NVKLMGF 844 Query: 69074 SFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLR 69253 + + E+ D D ++ K ++ A + L Sbjct: 845 EQIKEVYET-----------------------DHDFQEVY-KACEKFASGRYFRQDKFLF 880 Query: 69254 IKGHICVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCL 69433 + +CVP + D R + + G+ + +H+ MK D+ RC Sbjct: 881 YENRLCVPNCSL-RDLFVREAHGGGLMGHFGIAKTLEVMTEHFRWPHMKCDVKRICGRCN 939 Query: 69434 NCQQVKHEHQKPGGVTLRIP 69493 C+Q K + Q P G+ +P Sbjct: 940 TCKQAKSKIQ-PNGLYTPLP 958 Score = 100 bits (246), Expect(2) = 2e-072 Identities = 52/123 (42%), Positives = 78/123 (63%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + CD S G+GAVLM ++ +I + S +L NYPT+D +L A+V AL++W+HYL+ Sbjct: 715 FEIECDASGIGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQHYLWP 774 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 ++TDH SL ++ Q+ LN R RW+E ++ I Y GK NVVADALS++ + Sbjct: 775 KVFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVADALSQRYTLL 834 Query: 57667 GSL 57675 +L Sbjct: 835 STL 837 Score = 95.6 bits (234), Expect(2) = 5e-028 Identities = 71/198 (35%), Positives = 103/198 (51%), Gaps = 11/198 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL+S YHQ+++ E D KTAF+T++G YE+LVM F LT+A +TFM LMN Sbjct: 501 GSSIFSKIDLKSGYHQIRMNEGDEWKTAFKTKHGLYEWLVMPFGLTHAPSTFMRLMNHVL 560 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 R + EH HL +V +L++++LY KC + + + G Sbjct: 561 RAFIGIFVIVYFDDILVYSESLREHIEHLDSVLNVLRKEELYANLKKC-TFCTDNLVFLG 619 Query: 68398 ------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*K 68544 G + D + + S + +R L+ Y DF +I + LT + K Sbjct: 620 FVVSADGVKVDEEKVKAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKK 679 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTL 68631 +V F W E +FQ LK LT A +L L Sbjct: 680 DVGFKWEKAQEEAFQSLKDKLTNAPVLIL 708 Score = 63.6 bits (152), Expect = 4e-007 Identities = 44/137 (32%), Positives = 66/137 (48%) Frame = -1 Query: 38344 DGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADF 38165 D L + R+ VP L + EAH H G AK + +H+ W M+ D+ Sbjct: 876 DKFLFYENRLCVPNCSLR-DLFVREAHGGGLMGHFGIAKTLEVMTEHFRWPHMKCDVKRI 934 Query: 38164 VSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLT 37985 RC +Q K + ++ G + L I + W+ I+MDFV GLP+T K DSI+V+ Sbjct: 935 CGRCNTCKQAKSK-IQPNGLYTPLPIPKHPWNDISMDFVMGLPRTGK--DSIFVVYSPFQ 991 Query: 37984 KSAHFLPVQSLFSVVRL 37934 F P+ S F ++ L Sbjct: 992 IVYGFNPI-SPFDLIPL 1007 Score = 58.6 bits (139), Expect(2) = 5e-028 Identities = 38/127 (29%), Positives = 57/127 (43%), Gaps = 1/127 (0%) Frame = +2 Query: 67682 ESILVVSEFLEVFPTDLPD-VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQ 67858 E ++ ++ +VFP D P +PP I+ ID G P YR P E KE++ Q Sbjct: 407 EMTSLLQDYKDVFPEDNPKGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELQRQ-- 464 Query: 67859 DLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQ 68038 KD MC D R +N +T+ +PIPR+DD+ D L Sbjct: 465 ------------------------KDGSWRMCFDCRAINNVTVKYCHPIPRLDDMLDELH 500 Query: 68039 GASVSPRL 68062 G+S+ ++ Sbjct: 501 GSSIFSKI 508 Score = 44.1 bits (102), Expect = 0.30 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 ++ L + R+CVP L + EAH H G K + +HF W M+ D+ Sbjct: 875 QDKFLFYENRLCVPNCS-LRDLFVREAHGGGLMGHFGIAKTLEVMTEHFRWPHMKCDVKR 933 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMP 58154 +C C+Q K + Q P G +P Sbjct: 934 ICGRCNTCKQAKSKIQ-PNGLYTPLP 958 >gb|AAF79797.1|AC020646_20 (AC020646) T32E20.30 [Arabidopsis thaliana] Length = 1397 Score = 235 bits (592), Expect(3) = 3e-072 Identities = 180/578 (31%), Positives = 264/578 (45%), Gaps = 7/578 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y + EHE +L +VL+ L + + YA K H+ +G+ DP K A Sbjct: 686 IYSRNEQEHEEHLAMVLKVLEEHQFYANRKKPY----------HIT--QGVSTDPTKTVA 733 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN--LQDVSFMWLVKCDMSFLKLK 38990 + W P SV E+ F+GL YYRRF++G+ T A L L+ SF+W +F LK Sbjct: 734 MTKWVTPQSVKELRGFLGLTGYYRRFLKGYGTLARPLTELLKKDSFVWSESAQEAFDALK 793 Query: 38989 ELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNY-----P 38825 +++AP+L L G KVH L P Sbjct: 794 RAMSTAPVLALPDFG--------------------------------KVHGLTSKEQLKP 821 Query: 38824 TRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLS 38645 + EL IV ++ W+HYL G ++ +TD SL+ + QR+++ +W+ L Y+ Sbjct: 822 VYERELMAIVLSIQKWKHYLMGRRFVLHTDQKSLKFLQEQREVSMDYQKWLTKLLHYEFD 881 Query: 38644 ILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAY 38465 ILY G N A LSR +V P+ G L + F+ +++L Y Sbjct: 882 ILYKLGVDNKAADGLSR-----MVQPT---GSFSSMLLMAFTVPTVLQLHDLYEEI---- 929 Query: 38464 MGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQ 38285 D N Q +++ + A G A +G L R+ +P + Sbjct: 930 --------DSNAHLQH------LVKECLSAKQGTSAYTVKEGRLWKKQRLIIPKDSKFLP 975 Query: 38284 LILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGA 38105 LIL+E H H G K + ++Q + W GM DI FV++C Q+ K L G Sbjct: 976 LILAEYHSGLLGGHSGVLKTMKRIQQSFHWEGMMKDIQKFVAKCEMCQRQKYSTLSPAGL 1035 Query: 38104 FKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARI 37925 + L I W+ I++DFV GLP D+L+K HF+ ++ F+ V +ARI Sbjct: 1036 LQPLPIPTQVWEDISLDFVEGLP-------------DRLSKYGHFIGLKHPFNAVDVARI 1082 Query: 37924 YIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVL 37745 +I EVV+ HG P SI+SDR + F S F GT++ S AFHPQTD Q+E + L Sbjct: 1083 FIHEVVKLHGFPASIVSDRDNTFLSSFWKDCFKLSGTKLKYSTAFHPQTDGQTEVLNRTL 1142 Query: 37744 EDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGR 37610 E L Q+ P A+ YNS FH+ I+ F LYGR Sbjct: 1143 ETYLRCFASAHPKTWFQYLPRAELWYNSSFHTTIKTTPFKVLYGR 1187 Score = 209 bits (526), Expect = 6e-051 Identities = 111/277 (40%), Positives = 159/277 (57%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 TR IS+ PYR A ++ + E+L G IR S +P+ + VL VKKKD+S+R C++YR Sbjct: 526 TRAISVRPYRYPHAHKEAMEGLVSEMLDNGIIRASKSPFSSPVLLVKKKDQSWRFCVDYR 585 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 LN+ T+ NK+ IP ID D + GA +FSK+DL +GY Q+++ ++ KT F T GH+ Sbjct: 586 ALNRATIPNKFPIPMIDQLLDELHGAIIFSKLDLRAGYHQIRMKVEDIEKTTFRTHDGHF 645 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 EFLV FGL NAPA F MN + +P+L FV+VF DDILIYS++ + Sbjct: 646 EFLVMPFGLSNAPATFQSSMNDMLRPFLRKFVLVFFDDILIYSRNEQEHEEHLAMVLKVL 705 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 YA K H+ GV D +K A+ WV P +V ++ F+GL Sbjct: 706 EEHQFYANRKKPY----------HIT--QGVSTDPTKTVAMTKWVTPQSVKELRGFLGLT 753 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 YYRRF+ + ++A LT L K++ F+WS +E+F Sbjct: 754 GYYRRFLKGYGTLARPLTELLKKD-SFVWSESAQEAF 789 Score = 113 bits (281), Expect(2) = 1e-041 Identities = 55/136 (40%), Positives = 81/136 (59%) Frame = +1 Query: 69565 DVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWL 69744 D + + +RL+K HF+ ++ +N +A+I+I E+V+LHG SI+SDR F+S FW Sbjct: 1052 DFVEGLPDRLSKYGHFIGLKHPFNAVDVARIFIHEVVKLHGFPASIVSDRDNTFLSSFWK 1111 Query: 69745 SMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNS 69924 K GT++ ST FHPQTD Q+E + + LE L W Q+LP E YN+S Sbjct: 1112 DCFKLSGTKLKYSTAFHPQTDGQTEVLNRTLETYLRCFASAHPKTWFQYLPRAELWYNSS 1171 Query: 69925 YHLSFEMAPFEALYGR 69972 +H + + PF+ LYGR Sbjct: 1172 FHTTIKTTPFKVLYGR 1187 Score = 96.7 bits (237), Expect(2) = 1e-035 Identities = 69/199 (34%), Positives = 99/199 (49%), Gaps = 7/199 (3%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSK+DLR+ YHQ++++ EDI KT F+T GH+EFLVM F L+NA ATF MN Sbjct: 610 GAIIFSKLDLRAGYHQIRMKVEDIEKTTFRTHDGHFEFLVMPFGLSNAPATFQSSMNDML 669 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYH- 68394 R + ++EHE HL V +L+E + Y K YH Sbjct: 670 RPFLRKFVLVFFDDILIYSRNEQEHEEHLAMVLKVLEEHQFYANRKK---------PYHI 720 Query: 68395 -GGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVTF 68556 G D + +K LR L+ Y + ++A LT L K+ +F Sbjct: 721 TQGVSTDPTKTVAMTKWVTPQSVKELRGFLGLTGYYRRFLKGYGTLARPLTELL-KKDSF 779 Query: 68557 LWSDECEVSFQKLKT*LTTARILTLP 68634 +WS+ + +F LK ++TA +L LP Sbjct: 780 VWSESAQEAFDALKRAMSTAPVLALP 805 Score = 85.8 bits (209), Expect(2) = 1e-041 Identities = 88/370 (23%), Positives = 149/370 (39%), Gaps = 4/370 (1%) Frame = +2 Query: 68384 EDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*LSCG 68563 + + DP K + W+ P SV ++ FLGL GYYRR + Y L+ Sbjct: 722 QGVSTDPTKTVAMTKWVTPQSVKELRGFLGLTGYYRRFLKGYGT------------LARP 769 Query: 68564 LTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCV----LMQKGKVVAYASR 68731 LT LL+ + W E DA + + L GKV S+ Sbjct: 770 LTE-------------LLKKDSFVWSESAQEAFDALKRAMSTAPVLALPDFGKVHGLTSK 816 Query: 68732 QLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIW 68911 E+ +++ EL+ +V +++ W +YL G F + T+ +SL+++ QR++ + + W Sbjct: 817 -----EQLKPVYERELMAIVLSIQKWKHYLMGRRFVLHTDQKSLKFLQEQREVSMDYQKW 871 Query: 68912 LELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSNSFVLYI 69091 L L Y+ ILY G N AD LS GS + + + +A V + LY Sbjct: 872 LTKLLHYEFDILYKLGVDNKAADGLSRMVQPTGSFSSMLL----MAFTVPTVLQLHDLYE 927 Query: 69092 SESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGHIC 69271 L H +++ + ++ +A EG L K + Sbjct: 928 EIDSNA----HLQH-----------------LVKECLSAKQGTSAYTVKEGRLWKKQRLI 966 Query: 69272 VPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVK 69451 +P+ L + G+L ++Q + M +DI FV++C CQ+ K Sbjct: 967 IPKDSKFLPLILAEYHSGLLGGHSGVLKTMKRIQQSFHWEGMMKDIQKFVAKCEMCQRQK 1026 Query: 69452 HEHQKPGGVTLRIP 69493 + P G+ +P Sbjct: 1027 YSTLSPAGLLQPLP 1040 Score = 83.1 bits (202), Expect(2) = 1e-035 Identities = 44/112 (39%), Positives = 65/112 (57%) Frame = +2 Query: 67727 DLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWG 67906 +L +PP + I + GT+ I V PYR A + M+ + ++L+ IR S S + Sbjct: 506 NLKGLPPIKGNEHAISLLPGTRAISVRPYRYPHAHKEAMEGLVSEMLDNGIIRASKSPFS 565 Query: 67907 APLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +P+L VK+KD+ C+DYR LN+ TI N +PIP ID L D L GA + +L Sbjct: 566 SPVLLVKKKDQSWRFCVDYRALNRATIPNKFPIPMIDQLLDELHGAIIFSKL 617 Score = 69.1 bits (166), Expect = 9e-009 Identities = 36/96 (37%), Positives = 50/96 (51%) Frame = +3 Query: 57867 ARRGKEAVIDEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFL 58046 A++G A +EG L K+R+ +P+ + ILAE HS H G K ++Q F Sbjct: 945 AKQGTSAYTVKEGRLWKKQRLIIPKDSKFLPLILAEYHSGLLGGHSGVLKTMKRIQQSFH 1004 Query: 58047 WSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 W M DI FVA+C CQ+ KY P G L+ +P Sbjct: 1005 WEGMMKDIQKFVAKCEMCQRQKYSTLSPAGLLQPLP 1040 Score = 68.7 bits (165), Expect = 1e-008 Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 5/94 (5%) Frame = +1 Query: 57397 KVH-----EHNYPTHDLDLAAVVFALKQWRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRR 57561 KVH E P ++ +L A+V ++++W+HYL G + ++TD +SL ++ Q+++++ Sbjct: 809 KVHGLTSKEQLKPVYERELMAIVLSIQKWKHYLMGRRFVLHTDQKSLKFLQEQREVSMDY 868 Query: 57562 RRWMELLKDNDITILYHLGKANVVADALSRKVGSMGSLA 57678 ++W+ L + ILY LG N AD LSR V GS + Sbjct: 869 QKWLTKLLHYEFDILYKLGVDNKAADGLSRMVQPTGSFS 907 Score = 57.8 bits (137), Expect(3) = 3e-072 Identities = 55/167 (32%), Positives = 81/167 (47%), Gaps = 6/167 (3%) Frame = -3 Query: 37517 IQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGR-WGKLSPRYIGPFE 37341 I++ L Q ++ D R + F R+R+FL + P + R KL+ +Y GPFE Sbjct: 1219 IKEHLVNAQQLMKNNDDKHRREVEFDTRNRVFLKLRPYRQNSVTKRVCQKLAAKYFGPFE 1278 Query: 37340 ILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVV 37161 I+ G+VAY L LP S IH VF VS + + D H+ + L + LT E VV Sbjct: 1279 IMERIGKVAYRLKLPEG-SKIHLVFHVSQLKQVLGD-----HHQVIPLPEVLTADNEFVV 1332 Query: 37160 ILARY*GDCYREPFLLLRSVGSIIKSRRLP-----WRPSRRCKSSFPACLSLQ 37017 + Y E LL +++ + LP W ++ K FP L+LQ Sbjct: 1333 VPEAVLETRYNEDGLL----EALVHWQGLPVHEDTWEIAKDLKKQFPG-LALQ 1380 Score = 30.5 bits (67), Expect(3) = 3e-072 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+ F M + R L FV++F DDIL+ Sbjct: 652 FGLSNAPATFQSSMNDMLRPFLRKFVLVFFDDILI 686 >gb|AAC44032.1| (U19148) ORF2 [Agrobacterium tumefaciens] Length = 276 Score = 276 bits (698), Expect = 4e-071 Identities = 138/240 (57%), Positives = 171/240 (70%), Gaps = 2/240 (0%) Frame = +1 Query: 20503 DTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPA 20682 D D++ I +I E+PTYGYRRV ALLRR+A + N KRVYR+M+ + LLLER Sbjct: 34 DDDLVDEIKAIISEMPTYGYRRVHALLRRKARWESRSWPNVKRVYRVMKVHGLLLERHTG 93 Query: 20683 VPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFN 20862 S+R H GRVAV +SN RWCSDGFE CDN E++RV FALDCCDREA+ TT G Sbjct: 94 AIDSRR-HDGRVAVAQSNLRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIK 152 Query: 20863 SETVQDVMLGAVERRFG--NDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRS 21036 SE VQD+++ AVE RFG N LP P+EWLTDNGSC+ A++T+ +G+EP+ T VRS Sbjct: 153 SEDVQDLVITAVENRFGRINILPK-PIEWLTDNGSCFIASDTKSLLLDIGMEPRTTPVRS 211 Query: 21037 PESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLR 21216 P+SNG+AE+FVKT KRDY+S+ PD T L FEHYN HPH ALGYRSPRE+L Sbjct: 212 PQSNGMAEAFVKTFKRDYVSVNSIPDAKTVIAQLPLWFEHYNTLHPHKALGYRSPREFLN 271 Query: 21217 QR 21222 ++ Sbjct: 272 RQ 273 >dbj|BAA75235.1| (AB014746) polyprotein [Hordeum vulgare] Length = 265 Score = 258 bits (652), Expect(2) = 4e-067 Identities = 128/249 (51%), Positives = 169/249 (67%), Gaps = 3/249 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S +H+ +LR+VL LR+ +LYAK SKCEFWL V F GHV+S +G+ VDP + A Sbjct: 14 VYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVVVDPETVTA 73 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W +P +VT++ SF+GL YYRRF+E FS +A T L ++ F+W +C+ +F L Sbjct: 74 VTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKTARPMTQLLKKEEKFVWSPQCEKAFQTL 133 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE + S+P+L L F +YCDAS G+ VLM+ G + Y SR+L HE NYPT DL Sbjct: 134 KEKLVSSPVLILPDTRKDFMVYCDASCQGLGCVLMQDGHVVAYASRQLWPHEGNYPTHDL 193 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL G + E YTDH SL+ I Q DL R RW+EL+KDYD+ I YH Sbjct: 194 ELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLKLRQRRWLELIKDYDVGIHYH 253 Query: 38632 PGKKNMVAYSLS 38597 PGK N+VA +LS Sbjct: 254 PGKANVVADALS 265 Score = 181 bits (455), Expect = 1e-042 Identities = 103/206 (50%), Positives = 129/206 (62%), Gaps = 6/206 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S + ++VDP+ + + DW +P +V QI SFLGLAGYYRR + ++ Sbjct: 58 VISAKGVVVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKTARPMTQLLKKE 117 Query: 68552 LS------CGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C L K L+L R+ ++Y DAS GLGCVLMQ G V Sbjct: 118 EKFVWSPQCEKAFQTLKEKLVSSPVLILP----DTRKDFMVYCDASCQGLGCVLMQDGHV 173 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL HE Y HDLEL VV ALKIW +YL G ++T+H+SL+YIF Q DLK Sbjct: 174 VAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLK 233 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 LR+R WLEL+KDYD+ I YHPGK NVVADALS Sbjct: 234 LRQRRWLELIKDYDVGIHYHPGKANVVADALS 265 Score = 172 bits (431), Expect(2) = 6e-071 Identities = 82/121 (67%), Positives = 96/121 (78%) Frame = +1 Query: 57286 LASGR*NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 L R +F+VYCD S GLG VLM + +V+ YASRQL HE NYPTHDL+LAAVV ALK Sbjct: 145 LPDTRKDFMVYCDASCQGLGCVLMQDGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKI 204 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 WRHYL G +CE+YTDH+SL Y+FTQ DL LR+RRW+EL+KD D+ I YH GKANVVADAL Sbjct: 205 WRHYLIGNRCEIYTDHKSLKYIFTQSDLKLRQRRWLELIKDYDVGIHYHPGKANVVADAL 264 Query: 57646 S 57648 S Sbjct: 265 S 265 Score = 125 bits (311), Expect(2) = 6e-071 Identities = 62/131 (47%), Positives = 81/131 (61%) Frame = +2 Query: 56855 LELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVS 57034 L+ FV+VFIDDIL+YS+S + LYAK KCEF L+ V FLGHV+S Sbjct: 1 LDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVIS 60 Query: 57035 KDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPF 57214 GV+VD + AV W +P V+ + SF+GLA YYRRFI FS A +T L K+ F Sbjct: 61 AKGVVVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKTARPMTQLLKKEEKF 120 Query: 57215 IWSGECEESFQ 57247 +WS +CE++FQ Sbjct: 121 VWSPQCEKAFQ 131 Score = 74.1 bits (179), Expect = 3e-010 Identities = 52/127 (40%), Positives = 75/127 (58%), Gaps = 16/127 (12%) Frame = +1 Query: 68281 KEEHEHHLRTVFGILKEKKLYTKFSKCEIWLS-VQRRYHGGSEK----D*DN*RLD*TCF 68445 +E+H+HHLR V G L+E +LY K SKCE WLS V+ H S K D + T Sbjct: 19 EEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVVVDPE------TVT 72 Query: 68446 SYSDLKFLRPCRLLST-----------IYDFLSIASTLTRLT*KEVTFLWSDECEVSFQK 68592 + +D K + + + I +F A +T+L KE F+WS +CE +FQ Sbjct: 73 AVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKTARPMTQLLKKEEKFVWSPQCEKAFQT 132 Query: 68593 LKT*LTTARILTLPVEREGFVVY 68661 LK L ++ +L LP R+ F+VY Sbjct: 133 LKEKLVSSPVLILPDTRKDFMVY 155 Score = 26.6 bits (57), Expect(2) = 4e-067 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = -3 Query: 39383 LDSFVIIFMDDILV 39342 LD FV++F+DDILV Sbjct: 1 LDKFVVVFIDDILV 14 >dbj|BAA75238.1| (AB014753) polyprotein [Morus bombycis] Length = 265 Score = 254 bits (641), Expect(2) = 1e-065 Identities = 126/249 (50%), Positives = 167/249 (66%), Gaps = 3/249 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S +H+ +LR+VL LR+ +LYAK SKCEFWL V F GHV+S +G+ VDP + A Sbjct: 14 IYSQSEEDHQQHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTA 73 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W +P +VT+V +F+GL YYRRF+E FS A T L ++ F+W +C+ +F L Sbjct: 74 VTDWKQPKTVTQVRNFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTL 133 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE S+P+ L F +YCDAS G+ VLM+ G + Y SR+L+ HE NYPT DL Sbjct: 134 KEKPVSSPVFILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDL 193 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL + E YTDH SL+ I Q DLN R RW+EL+KDYD+ I +H Sbjct: 194 ELAAVVHALKIWRHYLIENRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHHH 253 Query: 38632 PGKKNMVAYSLS 38597 PGK N+VA +LS Sbjct: 254 PGKANVVADALS 265 Score = 175 bits (440), Expect = 7e-041 Identities = 100/206 (48%), Positives = 128/206 (61%), Gaps = 6/206 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 ++S + + VDP+ + + DW +P +V Q+ +FLGLAGYYRR S I+ P Sbjct: 58 VISAKGVAVDPETVTAVTDWKQPKTVTQVRNFLGLAGYYRRFIENFSKIARPMTQLLKKE 117 Query: 68537 XXXX*L-SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C L K +L R+ ++Y DAS+ GLGCVLMQ G V Sbjct: 118 EKFVWSPQCEKAFQTLKEKPVSSPVFILP----DTRKDFMVYCDASRQGLGCVLMQDGHV 173 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLEL VV ALKIW +YL ++T+H+SL+YIF Q DL Sbjct: 174 VAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIENRCEIYTDHKSLKYIFTQSDLN 233 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 LR+R WLEL+KDYD+ I +HPGK NVVADALS Sbjct: 234 LRQRRWLELIKDYDVGIHHHPGKANVVADALS 265 Score = 171 bits (429), Expect(2) = 8e-071 Identities = 81/121 (66%), Positives = 97/121 (79%) Frame = +1 Query: 57286 LASGR*NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 L R +F+VYCD S GLG VLM + +V+ YASRQL+ HE NYPTHDL+LAAVV ALK Sbjct: 145 LPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVVHALKI 204 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 WRHYL +CE+YTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ I +H GKANVVADAL Sbjct: 205 WRHYLIENRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHHHPGKANVVADAL 264 Query: 57646 S 57648 S Sbjct: 265 S 265 Score = 125 bits (312), Expect(2) = 8e-071 Identities = 64/131 (48%), Positives = 81/131 (60%) Frame = +2 Query: 56855 LELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVS 57034 L+ FV+VFIDDILIYS+S + LYAK KCEF L+ V FLGHV+S Sbjct: 1 LDEFVVVFIDDILIYSQSEEDHQQHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVIS 60 Query: 57035 KDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPF 57214 GV VD + AV W +P V+ V +F+GLA YYRRFI FS IA +T L K+ F Sbjct: 61 AKGVAVDPETVTAVTDWKQPKTVTQVRNFLGLAGYYRRFIENFSKIARPMTQLLKKEEKF 120 Query: 57215 IWSGECEESFQ 57247 +WS +CE++FQ Sbjct: 121 VWSPQCEKAFQ 131 Score = 67.9 bits (163), Expect = 2e-008 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 13/127 (10%) Frame = +1 Query: 68281 KEEHEHHLRTVFGILKEKKLYTKFSKCEIWLS-VQRRYHGGSEKD*DN*RLD-*TCFSYS 68454 +E+H+ HLR V G L+E +LY K SKCE WLS V+ H S K +D T + + Sbjct: 19 EEDHQQHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAK---GVAVDPETVTAVT 75 Query: 68455 DLKFLRPCRLLST-----------IYDFLSIASTLTRLT*KEVTFLWSDECEVSFQKLKT 68601 D K + + I +F IA +T+L KE F+WS +CE +FQ LK Sbjct: 76 DWKQPKTVTQVRNFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKE 135 Query: 68602 *LTTARILTLPVEREGFVVY 68661 ++ + LP R+ F+VY Sbjct: 136 KPVSSPVFILPDTRKDFMVY 155 Score = 26.2 bits (56), Expect(2) = 1e-065 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = -3 Query: 39383 LDSFVIIFMDDILV 39342 LD FV++F+DDIL+ Sbjct: 1 LDEFVVVFIDDILI 14 >dbj|BAA75236.1| (AB014750) polyprotein [Nicotiana tabacum] Length = 265 Score = 256 bits (647), Expect(2) = 8e-066 Identities = 128/249 (51%), Positives = 168/249 (67%), Gaps = 3/249 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S +H+ +LR+VL LR+ +LYAK SKCEFWL V F GHV+S +G+ VDP + A Sbjct: 14 IYSQSKEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTA 73 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + W +P +VT+V SF+GL YYRRF+E FS A T L ++ F+W +C+ +F L Sbjct: 74 VTDWKQPKTVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTL 133 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE + S+P+L L F +YCDAS G+ VLM+ G + Y SR+L+ HE NYPT DL Sbjct: 134 KEKLVSSPVLILPDTHKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDL 193 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 ELA +V AL IWRHYL G + E TDH SL+ I Q DLN R RW+EL+KDYD+ I H Sbjct: 194 ELAAVVHALKIWRHYLIGNRCEISTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHNH 253 Query: 38632 PGKKNMVAYSLS 38597 PGK N+VA +LS Sbjct: 254 PGKANVVADALS 265 Score = 175 bits (440), Expect = 7e-041 Identities = 102/206 (49%), Positives = 127/206 (61%), Gaps = 6/206 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 ++S + + VDP+ + + DW +P +V Q+ SFLGLAGYYRR S I+ P Sbjct: 58 VISAKGVAVDPETVTAVTDWKQPKTVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKE 117 Query: 68537 XXXX*L-SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C L K L+L + ++Y DAS+ GLGCVLMQ G V Sbjct: 118 EKFVWSPQCEKAFQTLKEKLVSSPVLILP----DTHKDFMVYCDASRQGLGCVLMQDGHV 173 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLEL VV ALKIW +YL G + T+H+SL+YIF Q DL Sbjct: 174 VAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEISTDHKSLKYIFTQSDLN 233 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 LR+R WLEL+KDYD+ I HPGK NVVADALS Sbjct: 234 LRQRRWLELIKDYDVGIHNHPGKANVVADALS 265 Score = 168 bits (422), Expect(2) = 5e-070 Identities = 79/115 (68%), Positives = 94/115 (81%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +F+VYCD S GLG VLM + +V+ YASRQL+ HE NYPTHDL+LAAVV ALK WRHYL Sbjct: 151 DFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 210 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALS 57648 G +CE+ TDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ I H GKANVVADALS Sbjct: 211 GNRCEISTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHNHPGKANVVADALS 265 Score = 125 bits (312), Expect(2) = 5e-070 Identities = 64/131 (48%), Positives = 82/131 (61%) Frame = +2 Query: 56855 LELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVS 57034 L+ FV+VFID+ILIYS+S++ LYAK KCEF L+ V FLGHV+S Sbjct: 1 LDEFVVVFIDNILIYSQSKEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVIS 60 Query: 57035 KDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPF 57214 GV VD + AV W +P V+ V SF+GLA YYRRFI FS IA +T L K+ F Sbjct: 61 AKGVAVDPETVTAVTDWKQPKTVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKF 120 Query: 57215 IWSGECEESFQ 57247 +WS +CE++FQ Sbjct: 121 VWSPQCEKAFQ 131 Score = 75.3 bits (182), Expect = 1e-010 Identities = 53/127 (41%), Positives = 75/127 (58%), Gaps = 13/127 (10%) Frame = +1 Query: 68281 KEEHEHHLRTVFGILKEKKLYTKFSKCEIWLS-VQRRYHGGSEKD*DN*RLD-*TCFSYS 68454 KE+H+HHLR V G L+E +LY K SKCE WLS V+ H S K +D T + + Sbjct: 19 KEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAK---GVAVDPETVTAVT 75 Query: 68455 DLKFLRPCRLLST-----------IYDFLSIASTLTRLT*KEVTFLWSDECEVSFQKLKT 68601 D K + + + I +F IA +T+L KE F+WS +CE +FQ LK Sbjct: 76 DWKQPKTVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKE 135 Query: 68602 *LTTARILTLPVEREGFVVY 68661 L ++ +L LP + F+VY Sbjct: 136 KLVSSPVLILPDTHKDFMVY 155 Score = 24.3 bits (51), Expect(2) = 8e-066 Identities = 8/14 (57%), Positives = 13/14 (92%) Frame = -3 Query: 39383 LDSFVIIFMDDILV 39342 LD FV++F+D+IL+ Sbjct: 1 LDEFVVVFIDNILI 14 >dbj|BAA15304.1| (D90800) ORF_ID:o309#10~similar to [SwissProt Accession Number P19779]~start codon is not identified yet [Escherichia coli] Length = 129 Score = 271 bits (686), Expect = 1e-069 Identities = 129/129 (100%), Positives = 129/129 (100%) Frame = -2 Query: 20958 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS 20779 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS Sbjct: 1 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS 60 Query: 20778 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK 20599 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK Sbjct: 61 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK 120 Query: 20598 FCLSAKQRP 20572 FCLSAKQRP Sbjct: 121 FCLSAKQRP 129 >dbj|BAA15282.1| (D90799) ORF_ID:o309#10~similar to [SwissProt Accession Number P19779]~start codon is not identified yet [Escherichia coli] Length = 129 Score = 271 bits (686), Expect = 1e-069 Identities = 129/129 (100%), Positives = 129/129 (100%) Frame = -2 Query: 20958 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS 20779 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS Sbjct: 1 TIIRQPLHWRRRKIVAEAAFHRSQHDVLYCFTVEAAGSDRPVQCLTITAVQRERDTQSLS 60 Query: 20778 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK 20599 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK Sbjct: 61 VITAELEPVRAPSLIAFFHGHSACMCPFRWRYSRFSLKQQRILAHDPVNTFGIDRRHTIK 120 Query: 20598 FCLSAKQRP 20572 FCLSAKQRP Sbjct: 121 FCLSAKQRP 129 >gb|AAD32759.1|AC007662_4 (AC007662) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1356 Score = 266 bits (672), Expect = 4e-068 Identities = 155/413 (37%), Positives = 220/413 (52%), Gaps = 8/413 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + +E F F G V + + + G G + +K + L +VRYIP + +N Sbjct: 318 HMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLTNVRYIPDMDRN 377 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAES------ 5889 L+S+G F+ GY G +I G V+ G TLY +N VA Sbjct: 378 LLSLGTFEKAGYKFESEDGILRIKAGNQVLLTGRRYDTLYL----LNWKPVASESLAVVK 433 Query: 5888 -VSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP 5712 + LWH RL HMS K M++LV KG L+ K + +CE C+ GK KR SF+ + Sbjct: 434 RADDTVLWHQRLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDCIYGKAKRKSFSLAHHDT 493 Query: 5711 *KVLLKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAE 5535 K L+ H+D+WG P SLG +++++ I DF+RKVWVYF+K + F F +W Sbjct: 494 -KEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNL 552 Query: 5534 VENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEH 5355 VENQ+ +VK LR+DNG E+ F FC + GI R +QNG+ ERMN+ + E Sbjct: 553 VENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEK 612 Query: 5354 ARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTT 5175 RSM + G+PK FWA T LIN+ PS L F+I ++ W YS+LR +GC Sbjct: 613 VRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPPVYSYLRRYGCVA 672 Query: 5174 YVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQ 4995 +VH D KL +A K LIGY + GY+ W RK + ++ F E+ +YKD Q Sbjct: 673 FVHTDD---GKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNIIFQENAVYKDLMQ 729 Query: 4994 K 4992 + Sbjct: 730 R 730 Score = 196 bits (493), Expect(2) = 2e-069 Identities = 116/252 (46%), Positives = 164/252 (65%), Gaps = 18/252 (7%) Frame = -2 Query: 4944 E*PINVEADTQPTPTEESEEVTREQ-----VLRRSSRTIRAPDRYSHSLHY---LLLIDE 4789 E P+ TQ T +E +V + V R R IRAP R+ +Y L ++ Sbjct: 772 ESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTED 831 Query: 4788 GE---PESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT 4618 GE PE++ +A + KW+LAMD+E+ S EKN+TW + P +R + +W+F+ K Sbjct: 832 GEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKL 891 Query: 4617 *PDG--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEK 4456 G + RFKA LV KG A DY EIF+PVVK SIR+LL IVA E++ LEQ+D K Sbjct: 892 GILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVK 951 Query: 4455 TVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFC 4276 T FLHG+L ++IYM P+G+ K + VC L ++LYGLKQAP+QW +KFD+FM + F Sbjct: 952 TAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFV 1011 Query: 4275 KAEKDPCCYFKKYTN-SYVFLLLYLDDMLI 4189 K+ D C Y K + S ++LL+Y+DD+L+ Sbjct: 1012 KSAYDSCAYTKVLPDGSVMYLLIYVDDILV 1041 Score = 96.7 bits (237), Expect(2) = 1e-037 Identities = 49/118 (41%), Positives = 72/118 (60%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG IS S Q VA ST E+EY++ + +W+K L DFG + + V IFCD+ S Sbjct: 1228 LGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQS 1287 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 AI + KN V H+RTKH+D+++HF+R+ + G + + + E+ ADIFT LA F+ Sbjct: 1288 AIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQ 1345 Score = 96.0 bits (235), Expect(2) = 2e-069 Identities = 49/109 (44%), Positives = 66/109 (59%) Frame = -3 Query: 4166 TTIWTRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRT 3987 T + L FEMKDLG AK+ILGM+I RDR+ L LSQE Y+ K+L + + +AKP Sbjct: 1050 TALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAM 1109 Query: 3986 TPLANHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 TPL HFK K + + + M VPY+ A+ S++ M+ TRPD Y Sbjct: 1110 TPLGAHFKFQAATEQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAY 1158 Score = 94.4 bits (231), Expect(2) = 1e-027 Identities = 52/145 (35%), Positives = 78/145 (52%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ ++E R++L S LP R+W E TT LIN+ +S L+ + + Sbjct: 594 YTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDK 653 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 P YSYL+ +GC+ F +++ K EPR + +GYP GYKV +K Sbjct: 654 KWSGNPPVYSYLRRYGCVAF--VHTDDGKLEPRAKKGVLIGYPVGVKGYKVWILDERKCV 711 Query: 65343 VSRDVSFYENVFPFTLFEVDFSFST 65417 VSR++ F EN L + + ST Sbjct: 712 VSRNIIFQENAVYKDLMQRQENVST 736 Score = 89.7 bits (219), Expect(2) = 1e-037 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 12/132 (9%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL-----------YRG 87726 W+ Q+ Y+ ++L+ + M +AK TP+ K + EQKL Y Sbjct: 1086 WLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQ-----AATEQKLIRDEDFMKSVPYSS 1140 Query: 87725 MIGSLLY-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSN 87549 +GS++Y + +RPD+ + VG+ +RF + P + H VK +L Y+KGT + Y K S+ Sbjct: 1141 AVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSS 1200 Query: 87548 FDLVGYADVDYVGYLVDRKSTTGM 87477 F +VGY D DY L R+S TG+ Sbjct: 1201 FSIVGYCDADYAADLDKRRSITGL 1224 Score = 71.4 bits (172), Expect = 2e-009 Identities = 63/226 (27%), Positives = 93/226 (40%), Gaps = 5/226 (2%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSID--- 88396 + +W +D+ CS HMT + F E + + Sbjct: 306 EDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVL 365 Query: 88395 -KVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTST 88219 V Y+ + NLLS+ +K G+ I Q L L G+R +Y ++ Sbjct: 366 TNVRYIPDMDRNLLSLGTF-EKAGYKFESEDGILRIKAGNQVL-LTGRRYDTLYLLNWKP 423 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 + + L + + D +LWH+RL H SQ + L+ K L K K VCE C G Sbjct: 424 VASESLAVVKRAD-DTVLWHQRLCHMSQKNMEILVRKGF---LDKKKVSSLDVCEDCIYG 479 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTR 87889 K + SF S + LE IH DL G P S G+ Y ++DD+TR Sbjct: 480 KAKRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTR 529 Score = 59.7 bits (142), Expect(3) = 5e-017 Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 +++ +MSEN SV +I+EF I++ L ++++ DE +A++L+++LP+++D + + S Sbjct: 122 LYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYS 181 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDS---SGSALSVN*RRRSKTKGQ 6477 G L DE+ + SK + V+ S L V + +K KG+ Sbjct: 182 SGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGE 230 Score = 58.6 bits (139), Expect(2) = 1e-027 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 6/125 (4%) Frame = +1 Query: 64546 RPCVLYQNERNLLYSYILLTKKTF-----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLR 64710 R C + Q +L L KK C C+ +G+ F + + + + + + Sbjct: 444 RLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDCI-YGKAKRKSFSLAHHDTKEKL-EYIH 501 Query: 64711 LDLW-EPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTI 64887 DLW P+ L+ +YF+ I+DDF+R W + K + +V+LV NQ + Sbjct: 502 SDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRV 561 Query: 64888 KSIRTYNGLEF 64920 K++RT NGLEF Sbjct: 562 KTLRTDNGLEF 572 Score = 43.4 bits (100), Expect(3) = 5e-017 Identities = 33/108 (30%), Positives = 61/108 (55%), Gaps = 18/108 (16%) Frame = -1 Query: 7102 MDSSKLEIEKFDG-SDFRIWKMQIEDYLYQKDLHESL-----TGVKPKSMTE-------- 6965 M ++++E+EKFDG D+ +WK ++ ++ L+ +L TG K + E Sbjct: 1 MSTARIEVEKFDGRGDYTMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEK 60 Query: 6964 ----EKWKLKDR*ALGLIRLTLSRNVALHIVKEKTTSGLLKALSNMYEKLSAMNKVYLMR 6797 E + K + A I L+++ V I KE T + +L AL +Y + N++Y + Sbjct: 61 LEKFEALEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKALPNRIYPKQ 120 Query: 6796 RCSIYK 6779 + +K Sbjct: 121 KLYSFK 126 Score = 33.6 bits (75), Expect(3) = 5e-017 Identities = 29/91 (31%), Positives = 45/91 (48%), Gaps = 10/91 (10%) Frame = -2 Query: 6468 G*SKSKN*GKP-PNRSNVTCLNCGEK*HFWTS---YTKPKKKQNQKF------GDDNDSV 6319 G K K GK ++ C CGE+ HF +S KP+ KQ+Q G N + Sbjct: 229 GEQKGKGKGKKGKSKKKPGCWTCGEEGHFRSSCPNQNKPQFKQSQVVKGESSGGKGNLAE 288 Query: 6318 NSTEDIGDALILSVNSPVESWILDSGASFPFVSKQGVVQKF 6196 + + +AL + + WILD+G S+ K+ +F Sbjct: 289 AAGYYVSEALSSTEVHLEDEWILDTGCSYHMTYKREWFHEF 329 >emb|CAA39915.1| (X56563) putative coding sequence [Sinorhizobium meliloti] Length = 276 Score = 268 bits (677), Expect = 1e-068 Identities = 133/241 (55%), Positives = 168/241 (69%), Gaps = 1/241 (0%) Frame = +1 Query: 20503 DTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPA 20682 D +++ I VI ++PTYGYRRV A+LRR A G NAKRVYR+M+ + LLL R Sbjct: 34 DRELVEDIKAVIADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRVMKLHNLLLVRHTG 93 Query: 20683 VPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFN 20862 R H G+VAV+ SN RWCSDGFE CDN E++RV FALDCCDREA+ TT G Sbjct: 94 AVDD-RLHEGQVAVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIK 152 Query: 20863 SETVQDVMLGAVERRFGN-DLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSP 21039 S+ VQD+++ AVE RFG ++ S P+EWLTDNGSC+ A +T R +G+EP T VRSP Sbjct: 153 SQDVQDLVITAVENRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSP 212 Query: 21040 ESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQ 21219 +SNG+AE+FVKT KRDY+S+ P PD T L FEHYN HPHSALGY+SPRE++ Sbjct: 213 QSNGMAEAFVKTFKRDYVSVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREFISS 272 Query: 21220 RA 21225 ++ Sbjct: 273 QS 274 >dbj|BAA78625.1| (AB028236) Pol (reverse transcriptase-RNase H-integrase) [Tricholoma nauseosum] Length = 1057 Score = 268 bits (677), Expect = 1e-068 Identities = 187/571 (32%), Positives = 290/571 (50%), Gaps = 21/571 (3%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH R+VL+ LR +LY KCEF + + G ++S+ + +DP+K+ + W P Sbjct: 261 EHRRITRLVLERLRRYKLYLHQDKCEFERTKIEYLGLIISEGQVEMDPIKVNRVTAWPTP 320 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHL--NLQDVSFMWLVKCDMSFLKLKELITSAP 38969 T+ EV SF+G +++YRRF++ FS A L ++ W +F KLKE++TSAP Sbjct: 321 TNKKEVQSFLGFINFYRRFIKDFSHHARLLFDLTGKEAWRWDNAQQEAFEKLKEMVTSAP 380 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WF-IDYVSRELKVHELNYPTRDLEL 38807 ILT + F + D+S + VL +Q W + + S+ L E NY D E+ Sbjct: 381 ILTFADDLRPFRVEADSSDFAMGAVLSQQSPEDQKWHPVAFYSKSLSAVERNYEIHDKEM 440 Query: 38806 AVIVFALMIWRHYLYGVQY--ETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 I+ AL WRH+L G Q+ E +TDH +L+ M + LN R RW L +D S+ + Sbjct: 441 LAIMRALEEWRHFLEGAQHKVEIWTDHKNLEYFMTAKKLNRRQARWSLYLSRFDFSLHHR 500 Query: 38632 PGKKNMVAYSLSRK----------Q*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYS 38483 PG+ +LSR+ Q + ++ P + Q ++R DI ++ Sbjct: 501 PGRSMGKTDALSRRADHGDGSGDNQNIVLLQPDLFTIRALEGIAPQGEERDILR-DICHA 559 Query: 38482 RCVLAYMGVQS-SLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVP 38306 C + V + ++ + +G + LSLR A D +L F RI VP Sbjct: 560 NCSGLHEDVVARAVKELRKG------STLSLRAAEWAEKED--------LLYFRDRIYVP 605 Query: 38305 TVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVE 38126 D + I+S+ H+ + + H G K ++Y W M I + C KV Sbjct: 606 NDPDLRRRIISQHHDSQIAGHPGRWKTLELTSRNYWWPQMSRLIGQYCRTCDLCLCTKVP 665 Query: 38125 HLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFS 37946 + G L + E +WD +++DFV LP+ S G D++ VD + K AHF+P + S Sbjct: 666 RRKPIGELHPLPVPESRWDVVSVDFVVELPE-SNGFDAVMCTVDSVGKRAHFIPTHTTVS 724 Query: 37945 VVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQS 37766 + AR+Y+ V + HG+P + +SDRG QF + F LG ++ S A+HPQTD Q+ Sbjct: 725 ALGAARLYLHHVWKLHGLPGAFLSDRGPQFMAEFTRELYRLLGIKLLASTAYHPQTDGQT 784 Query: 37765 EHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGR 37610 E Q LE + + V E D PLA+F YN+ H++ Q F+ GR Sbjct: 785 ERVNQELEQYIRLFVNERQDDWDDLLPLAEFGYNNHVHASTQQTPFLLDTGR 836 Score = 173 bits (435), Expect(2) = 8e-058 Identities = 103/276 (37%), Positives = 151/276 (54%), Gaps = 1/276 (0%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQL 56599 P S Y ++P E R+L + E L G IRPS +P + FVKKKD S R +YR+L Sbjct: 95 PSSCKVYPLSPEEQRQLDQFIDEHLASGRIRPSKSPMASPFFFVKKKDGSLRPVQDYRRL 154 Query: 56600 NKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEF 56779 N +T+KN+Y +P I + + + GA F+K+D+ GY ++I + K AF T G +E Sbjct: 155 NNITVKNRYPLPLISELVNQLHGARYFTKLDVRWGYNNVRIKEGDEWKAAFRTNRGLFEL 214 Query: 56780 LVKSFGLKNAPAAFMGLMNGIFKP-YLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXX 56956 LV FGL N+PA F +MN IF LE V +++DDILI+++ + Sbjct: 215 LVMFFGLTNSPATFQTMMNDIFHDLILEGVVCIYLDDILIFTRMVEEHRRITRLVLERLR 274 Query: 56957 XKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLAS 57136 LY KCEF + +LG ++S+ V +D K+ V W PTN +V SF+G + Sbjct: 275 RYKLYLHQDKCEFERTKIEYLGLIISEGQVEMDPIKVNRVTAWPTPTNKKEVQSFLGFIN 334 Query: 57137 YYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 +YRRFI FS A L +LT + + W +E+F+ Sbjct: 335 FYRRFIKDFSHHARLLFDLTGKEA-WRWDNAQQEAFE 370 Score = 122 bits (303), Expect = 8e-025 Identities = 62/160 (38%), Positives = 95/160 (58%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 +PE + + ++VD VVEL + G FD + V+ + K AHF+P TT + A++Y+ + Sbjct: 678 VPESRWDVVSVDFVVELPESNG-FDAVMCTVDSVGKRAHFIPTHTTVSALGAARLYLHHV 736 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 +LHG+ + +SDRG +FM+ F +++ LG ++ ST +HPQTD Q+E + Q LE + Sbjct: 737 WKLHGLPGAFLSDRGPQFMAEFTRELYRLLGIKLLASTAYHPQTDGQTERVNQELEQYIR 796 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 V + + WD LPL EF YNN H S + PF GR Sbjct: 797 LFVNERQDDWDDLLPLAEFGYNNHVHASTQQTPFLLDTGR 836 Score = 80.0 bits (194), Expect(2) = 8e-058 Identities = 45/116 (38%), Positives = 69/116 (58%), Gaps = 8/116 (6%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ER------NVITYASRQLKVHEHNYPTHDLDLAAVVFALKQW 57468 F V D S +GAVL + + + + S+ L E NY HD ++ A++ AL++W Sbjct: 391 FRVEADSSDFAMGAVLSQQSPEDQKWHPVAFYSKSLSAVERNYEIHDKEMLAIMRALEEW 450 Query: 57469 RHYLYGV--KCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADA 57642 RH+L G K E++TDH++L Y T K LN R+ RW L D ++ + G++ DA Sbjct: 451 RHFLEGAQHKVEIWTDHKNLEYFMTAKKLNRRQARWSLYLSRFDFSLHHRPGRSMGKTDA 510 Query: 57643 LSRK 57654 LSR+ Sbjct: 511 LSRR 514 Score = 76.9 bits (186), Expect = 4e-011 Identities = 54/209 (25%), Positives = 102/209 (47%), Gaps = 15/209 (7%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S+ + +DP K+ + W P + ++ SFLG +YRR + + Sbjct: 298 IISEGQVEMDPIKVNRVTAWPTPTNKKEVQSFLGFINFYRRFIKDFSHHARLLFDLTGKE 357 Query: 68552 L-------SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ--- 68701 ++ + S+ + + P++ + D+S +G VL Q Sbjct: 358 AWRWDNAQQEAFEKLKEMVTSAPILTFADDLRPFR------VEADSSDFAMGAVLSQQSP 411 Query: 68702 ---KGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAV--FTNHRSLQ 68866 K VA+ S+ L E+ Y IHD E++ ++ AL+ W ++L G V +T+H++L+ Sbjct: 412 EDQKWHPVAFYSKSLSAVERNYEIHDKEMLAIMRALEEWRHFLEGAQHKVEIWTDHKNLE 471 Query: 68867 YIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKA 68998 Y + L R+ W L +D ++ + PG++ DALS +A Sbjct: 472 YFMTAKKLNRRQARWSLYLSRFDFSLHHRPGRSMGKTDALSRRA 515 Score = 66.7 bits (160), Expect(2) = 1e-021 Identities = 70/215 (32%), Positives = 102/215 (46%), Gaps = 14/215 (6%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G F+K+D+R Y+ ++++E D K AF+T G +E LVM+F LTN+ ATF +MN F Sbjct: 177 GARYFTKLDVRWGYNNVRIKEGDEWKAAFRTNRGLFELLVMFFGLTNSPATFQTMMNDIF 236 Query: 68218 RQYXXXXXXXXXXXXXXXXCRK-EEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYH 68394 R EEH R V L+ KLY KCE + + Y Sbjct: 237 HDLILEGVVCIYLDDILIFTRMVEEHRRITRLVLERLRRYKLYLHQDKCE-FERTKIEYL 295 Query: 68395 G----GSEKD*DN*RLD*TCF---------SYSDLKFLRPCRLLSTIYDFLSIASTLTRL 68535 G + + D +++ S L F+ R I DF A L L Sbjct: 296 GLIISEGQVEMDPIKVNRVTAWPTPTNKKEVQSFLGFINFYRRF--IKDFSHHARLLFDL 353 Query: 68536 T*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY*CFSDWS 68682 T KE + W + + +F+KLK +T+A ILT + F V SD++ Sbjct: 354 TGKE-AWRWDNAQQEAFEKLKEMVTSAPILTFADDLRPFRVEADSSDFA 401 Score = 65.6 bits (157), Expect(2) = 1e-021 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Frame = +2 Query: 67703 EFLEVFPTDLPD-VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVF 67879 EF +VF + D +P D I++ G P Y ++P E +++ + + L Sbjct: 64 EFEDVFSKESFDSLPARKPWDHAIELTPGATPSSCKVYPLSPEEQRQLDQFIDEHLASGR 123 Query: 67880 IRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPR 68059 IR S S +P FVK+KD + DYR+LN IT+ N YP+P I +L + L GA + Sbjct: 124 IRPSKSPMASPFFFVKKKDGSLRPVQDYRRLNNITVKNRYPLPLISELVNQLHGARYFTK 183 Query: 68060 L 68062 L Sbjct: 184 L 184 Score = 50.0 bits (117), Expect = 0.005 Identities = 25/90 (27%), Positives = 44/90 (48%) Frame = +3 Query: 57894 DEEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIV 58073 ++E +L ++R+ VP DL I+++ H S+ + HPG K +++ W +M I Sbjct: 591 EKEDLLYFRDRIYVPNDPDLRRRIISQHHDSQIAGHPGRWKTLELTSRNYWWPQMSRLIG 650 Query: 58074 DFVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 + C C K ++P G L +P E Sbjct: 651 QYCRTCDLCLCTKVPRRKPIGELHPLPVPE 680 Score = 43.8 bits (101), Expect = 0.39 Identities = 23/61 (37%), Positives = 35/61 (56%) Frame = -3 Query: 37448 RFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIAGEVAYELDLPPTFSAIHPV 37269 ++ V DR++L S + KL+ R++GPF I++ G AY L LP + S +HPV Sbjct: 892 QYKVGDRVYLDSSDISTTRPSK---KLAHRFLGPFPIVKCVGTHAYRLRLPASMSRLHPV 948 Query: 37268 F 37266 F Sbjct: 949 F 949 >gb|AAD28752.1| (AF126537) putative transposase [Sinorhizobium meliloti] Length = 276 Score = 267 bits (676), Expect = 1e-068 Identities = 137/272 (50%), Positives = 178/272 (65%), Gaps = 1/272 (0%) Frame = +1 Query: 20410 SRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRR 20589 S C + A+ ++ R R D +++ I VI ++PTYGYRRV A+LRR Sbjct: 3 SVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVIADMPTYGYRRVHAILRR 62 Query: 20590 QAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFC 20769 A G NAKRVYR+M+ + LLL R + R H G+VAV+ SN RWCSDGFE Sbjct: 63 NARKLGRSWPNAKRVYRVMKLHNLLLVRHTGAVDN-RLHEGQVAVERSNIRWCSDGFEIG 121 Query: 20770 CDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGN-DLPSSPVEWL 20946 CDN E++RV FALDCCDREA+ TT G S+ VQD+++ AVE RFG ++ S P+EWL Sbjct: 122 CDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSEPIEWL 181 Query: 20947 TDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTA 21126 TDNGSC+ A +T R +G+EP T VRSP+SNG+AE+FVKT KRDY+++ P PD T Sbjct: 182 TDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPDAETV 241 Query: 21127 AKNLAEAFEHYNEWHPHSALGYRSPREYLRQRA 21225 L FEHYN HPHSALGY+SPRE++ ++ Sbjct: 242 MAQLPFWFEHYNNLHPHSALGYQSPREFISSQS 274 >gb|AAF18630.1|AC006228_1 (AC006228) F5J5.1 [Arabidopsis thaliana] Length = 1463 Score = 155 bits (388), Expect(2) = 2e-068 Identities = 74/136 (54%), Positives = 100/136 (73%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 T G I Q Y + L++RF M AK TP++ KL + G +V++K+YRGMIGSLL Sbjct: 1204 TDEGVHISQSMYAQGLIQRFGMQTAKTSKTPMSATAKLSADEAGLSVDEKMYRGMIGSLL 1263 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YLTASRPD+ FSVG+CAR+Q NPK+SH+ A+K IL Y+KGT+D+G++Y K +N +LVG+ Sbjct: 1264 YLTASRPDLCFSVGVCARYQANPKQSHLNAMKWILKYVKGTTDVGLFYSKQTNQNLVGFC 1323 Query: 87527 DVDYVGYLVDRKSTTG 87480 D D+ G L DR+STTG Sbjct: 1324 DADWAGNLDDRRSTTG 1339 Score = 142 bits (354), Expect = 8e-031 Identities = 80/232 (34%), Positives = 119/232 (50%) Frame = -2 Query: 88578 VRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSI 88399 V ++ + WY DS CSRHMTG +++ D+ + Sbjct: 556 VSQNNRAWYFDSGCSRHMTGVQSILKDFSVINNGKVTFGDGGKGSIKGKGKIEIDDQPHL 615 Query: 88398 DKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTST 88219 VY+V+GL NL+SISQLCD + V F TG +++ VL G + + + Sbjct: 616 SNVYFVEGLTANLISISQLCDDDLTVTFTKTGCVALDIAGNN-VLSG-----VCSGNNCY 669 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 ++ VCLS + LWH+RLRH + L K++ D+V G+PK + VC+ C+ G Sbjct: 670 MWKDSEVCLSAITSKLDLWHQRLRHMNTQSLVKIVNADVVRGIPKLEGSTSVVCKTCSQG 729 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 K +K K + +T LEL+HMDL GP++ +S K Y+ VLVDDY+R T Sbjct: 730 KQVKVQQKRATHIGTTSVLELVHMDLMGPVQTESLSGKKYILVLVDDYSRFT 781 Score = 134 bits (333), Expect(2) = 2e-068 Identities = 64/118 (54%), Positives = 85/118 (71%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FL + L+S SKKQ+ V+LSTAEAEY+A CC Q+LW+KQ L D+G+ + ++CDN Sbjct: 1343 FLRNNLVSWHSKKQSCVSLSTAEAEYIALGSCCTQLLWMKQMLLDYGMTSNTLLVYCDNM 1402 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHF 87118 SAINI KN VQH RTKH+DIRHHF+R+ VE + ++ + E+Q+ADIFT SL F Sbjct: 1403 SAINISKNPVQHSRTKHIDIRHHFIRELVENKIVEISHVSSEKQLADIFTKSLDLNSF 1460 Score = 130 bits (323), Expect = 4e-027 Identities = 88/296 (29%), Positives = 147/296 (48%), Gaps = 12/296 (4%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + + K+F N GKV D I+GKG K + +Q L +V ++ G+ N Sbjct: 572 HMTGVQSILKDFSVINNGKVTFGDGGKGSIKGKG----KIEIDDQPHLSNVYFVEGLTAN 627 Query: 6050 LISVGQ---------FDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 LIS+ Q F TG A+ G+ ++ GV G N + C++ Sbjct: 628 LISISQLCDDDLTVTFTKTGCVALDIAGN-NVLSGV---CSGNNCYMWKDSEVCLSA--- 680 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMG---LCESCVMGKQKRVSFTK 5727 S LWH RL HM+ + + +V + G+ + +C++C GKQ +V + Sbjct: 681 --ITSKLDLWHQRLRHMNTQSLVKIVNADVVRGIPKLEGSTSVVCKTCSQGKQVKVQQKR 738 Query: 5726 TPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKK 5547 +L++ H D+ GP SL G ++ + + D+SR WV FL+ + +FK Sbjct: 739 ATHIGTTSVLELVHMDLMGPVQTESLSGKKYILVLVDDYSRFTWVRFLREKFEAAESFKI 798 Query: 5546 WKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKI 5367 +++ + + ++RSD+GGE+ F FC +GIR + P +Q+G+ ER N+ Sbjct: 799 LALQLQTEKG-NLVQIRSDHGGEFQNEEFEKFCRIQGIRHQFSAPRTPQQSGVVERKNRT 857 Query: 5366 LNEHARSM 5343 L E AR+M Sbjct: 858 LQEMARAM 865 Score = 120 bits (298), Expect = 3e-024 Identities = 66/202 (32%), Positives = 110/202 (53%), Gaps = 1/202 (0%) Frame = -1 Query: 90349 LLFNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYK 90170 LL + + Y +WK RM I+ + + W + +G P +G K+ KP + A+ K Sbjct: 14 LLLDTKRYGYWKVRMTQIIRGQGEDAWTAVEEGWEPPFDLTEDGFKITKPKANWT-AEEK 72 Query: 90169 MLGK-NAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEY 89993 + K NA+A +V G+ DEF I C SAKQ WDTLQ SHEGT+ V++ ++ + +++ Sbjct: 73 LQSKFNARAMNAIVNGIDEDEFKLIQGCKSAKQAWDTLQKSHEGTSSVKRTRLDHIATQF 132 Query: 89992 EAFKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAK 89813 E KM+ +++ ++ + + NE LGK Y ++ V K+LR P + +R A Sbjct: 133 EYLKMEPYETIVKFSSKISALANEAEVLGKTYKDQKLVKKLLRCLPPKFPAHKAVMRVAG 192 Query: 89812 DLTNMTLDELVRNLKTYEMNVDK 89744 + ++ +LV LK+ EM D+ Sbjct: 193 NTDKISFVDLVGMLKSEEMEPDQ 215 Score = 92.4 bits (226), Expect(2) = 3e-016 Identities = 70/202 (34%), Positives = 108/202 (52%), Gaps = 14/202 (6%) Frame = -2 Query: 4932 NVEADTQP--------TPTEESE-EVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEP 4780 +VE T+P P SE +V E R +R I+ Y + + + EP Sbjct: 955 DVEQTTEPRTSSSRLTVPKSHSETDVIGELDGDRVTRGIKM--NYRDMILFTCFVSSIEP 1012 Query: 4779 ESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK- 4603 ++ + AL+ E W A +E+ +++ W L + KW+F+ KT +G Sbjct: 1013 KNIEIALEDEF---WYQACHEELNHFSRHEVWDLVPRQVHVNVVGTKWIFKNKTDEEGNV 1069 Query: 4602 RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGD 4435 R +A LV +G + D+ E F+PV +L SIR+LL I + L QMD K+ FL+G Sbjct: 1070 TRNRARLVAQGYSQVEGIDFDETFAPVARLESIRLLLGISCLLKIKLFQMDVKSAFLNGV 1129 Query: 4434 LDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAP 4327 + +E+++ Q KGF V KL ++LYGLKQAP Sbjct: 1130 IQEEVFVSQLKGFEDSNLPDHVYKLKKALYGLKQAP 1165 Score = 44.9 bits (104), Expect = 0.17 Identities = 27/98 (27%), Positives = 54/98 (54%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM +G LG++I + +++SQ +Y + ++ RF + AK TP++ Sbjct: 1181 MTKEFEMSMVGEMNHFLGLQIKQTDEG--VHISQSMYAQGLIQRFGMQTAKTSKTPMSAT 1238 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICS-----LVSVMVCTR 3855 KLS +++ +V+E+ + ++ L + + SV VC R Sbjct: 1239 AKLSADEAGLSVDEKMYRGMIGSLLYLTASRPDLCFSVGVCAR 1281 Score = 43.4 bits (100), Expect(3) = 2e-005 Identities = 25/78 (32%), Positives = 43/78 (55%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +L+ +DL P + +G KY L++VDD+SR TW + L K ++ K ++L + Sbjct: 749 ELVHMDLMGPVQTESLSGKKYILVLVDDYSRFTWVRFLREKFEAAESFK-ILALQLQTEK 807 Query: 64879 VTIKSIRTYNGLEFISHE 64932 + IR+ +G EF + E Sbjct: 808 GNLVQIRSDHGGEFQNEE 825 Score = 29.7 bits (65), Expect(3) = 2e-005 Identities = 13/24 (54%), Positives = 20/24 (83%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLY 65057 T QQ+G VERK++ L E+ARA+++ Sbjct: 844 TPQQSGVVERKNRTLQEMARAMIH 867 Score = 23.5 bits (49), Expect(3) = 2e-005 Identities = 20/58 (34%), Positives = 28/58 (47%), Gaps = 9/58 (15%) Frame = +2 Query: 64460 TGMNLNFYNPLMSCMSHGNSTDYLWHNRLGHV---SFIK------MKGISSIHISFSPKK 64612 +G N + C+S S LWH RL H+ S +K ++GI + S S Sbjct: 664 SGNNCYMWKDSEVCLSAITSKLDLWHQRLRHMNTQSLVKIVNADVVRGIPKLEGSTS--- 720 Query: 64613 HFVCTVC 64633 VC C Sbjct: 721 -VVCKTC 726 Score = 21.9 bits (45), Expect(2) = 3e-016 Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Frame = -3 Query: 5111 IGYGSNLFGYRFWDDKNRKILRHCDVTFDES------VMYKDKEQKVLEI 4980 +GY +N YR ++ + +++ +V F + + +D +++V EI Sbjct: 892 LGYATNSMAYRVYNKRLKRVEESVNVFFYDKHPTRLFTVEQDDDEQVEEI 941 >emb|CAA37917.1| (X53973) reverse transcriptase [Arabidopsis thaliana] Length = 587 Score = 205 bits (516), Expect(2) = 2e-068 Identities = 116/264 (43%), Positives = 171/264 (63%), Gaps = 20/264 (7%) Frame = -2 Query: 4947 EE*PINVEADTQPTP------TEESEEVTREQVLR-RSSRTIRAPDRYSH------SLHY 4807 EE VE + +P P T+ + + Q+ + R R I P R++ +L Sbjct: 2 EESDETVEEEQEPEPQVELPKTQTTSSLAYYQLAKDRERREIHPPARFTEESGVAFALVT 61 Query: 4806 LLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFR 4627 + + EP+S+ EA ++ KW+LA +EM SL KN TWVL D P ++ + +W+F+ Sbjct: 62 VETLSMEEPQSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFK 121 Query: 4626 IKT*PDGKR--RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQM 4465 +K+ G R+KA LV KG DY EIF+PVVK T IRIL+ +V +++ LEQM Sbjct: 122 MKSGIPGVEPVRYKARLVAKGYTQREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQM 181 Query: 4464 DEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKS 4285 D KT FLHG+L++E+YM+QP+GF+ ++ VC L + LYGLKQ+PRQW K+F+ FM Sbjct: 182 DVKTAFLHGELEEELYMEQPEGFISEDGKNKVCLLKKLLYGLKQSPRQWNKRFNRFMIDQ 241 Query: 4284 EFCKAEKDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNNL 4156 F ++E D C Y K+ T +++LLLY+DDMLI G + E N + Sbjct: 242 NFIRSEHDACVYVKQVTEQEHLYLLLYVDDMLIAGKNKSEINKV 285 Score = 88.9 bits (217), Expect(2) = 5e-032 Identities = 47/124 (37%), Positives = 73/124 (57%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S + Q+ ALST EAE++A + LWIK + D GL+ ++V ++CD+ S Sbjct: 458 VGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQS 517 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 AI + KN H+RTKH+D+R++F+RD VE G + + AD T S+ F+ + Sbjct: 518 AICLSKNSTHHERTKHIDVRYNFIRDVVEAGDVDVLKIHTSRNPADALTKSIPVNKFQ-S 576 Query: 87108 RLEL 87097 LEL Sbjct: 577 ALEL 580 Score = 84.3 bits (205), Expect(2) = 2e-068 Identities = 45/104 (43%), Positives = 63/104 (60%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKD+GPA +ILG+ I RDR L +SQ YI V+ RF + +AK +P+ Sbjct: 288 QLSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQASYIHNVVQRFNMAEAKVTRSPIGA 347 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 HFKL+ + + N +VPYA A+ S++ M+ TRPD Y Sbjct: 348 HFKLAAVRDDDECIDNN---VVPYASAVGSIMYAMIGTRPDLAY 388 Score = 78.4 bits (190), Expect(2) = 5e-032 Identities = 46/128 (35%), Positives = 72/128 (55%), Gaps = 6/128 (4%) Frame = -3 Query: 87863 QQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQKLYRGMIGSLLY-L 87702 Q Y+ +++RF M +AK +PI KL D E I + V Y +GS++Y + Sbjct: 322 QASYIHNVVQRFNMAEAKVTRSPIGAHFKLAAVRDDDECIDNNVVP--YASAVGSIMYAM 379 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RPD+ + + L +R+ P H +AVK IL Y++G+ DL + + K F + GY D Sbjct: 380 IGTRPDLAYDICLVSRYMARPGSIHWEAVKWILRYMRGSQDLNLVFTKEKEFRVTGYCDS 439 Query: 87521 DYVGYLVDRKSTTG 87480 DY L R+S +G Sbjct: 440 DYAADLDRRRSVSG 453 >emb|CAA37920.1| (X53975) orf 3 [Arabidopsis thaliana] Length = 494 Score = 208 bits (524), Expect(2) = 2e-068 Identities = 118/264 (44%), Positives = 170/264 (63%), Gaps = 20/264 (7%) Frame = -2 Query: 4947 EE*PINVEADTQPTP------TEESEEVTREQVLR-RSSRTIRAPDRYSH------SLHY 4807 EE +V+ + +P P T+ + + Q+ R R R I P R++ +L Sbjct: 3 EESDESVDEEQEPEPQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVT 62 Query: 4806 LLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFR 4627 + + EP+S+ EA ++ KW+LA +EM SL KN TWVL D P ++ + +W+F+ Sbjct: 63 VETLSMEEPQSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFK 122 Query: 4626 IKT*PDGKR--RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQM 4465 +K+ G R+KA LV KG DY EIF+PV K TSIRIL+ +V +++ LEQM Sbjct: 123 MKSGIPGVEPVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQM 182 Query: 4464 DEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKS 4285 D KT FLHG+L++E+YM+QP GF+ E+ VC L +SLYGLKQ+PRQW K+F FM Sbjct: 183 DVKTAFLHGELEEELYMEQPDGFISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQ 242 Query: 4284 EFCKAEKDPCCYFKKY-TNSYVFLLLYLDDMLIEGSSMRENNNL 4156 F ++E D C Y K+ +++LLLY+DDMLI G S E N + Sbjct: 243 NFIRSEHDACVYVKQAGEQDHLYLLLYVDDMLIAGKSKSEINKV 286 Score = 81.1 bits (197), Expect(2) = 2e-068 Identities = 43/104 (41%), Positives = 62/104 (59%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 +LS FEMKD+GPA +ILG+ I RDR L +SQ YI V+ RF + +AK +P+ Sbjct: 289 QLSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQARYIHNVVQRFNMAEAKVTRSPIGA 348 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 HFKL+ + + N +PYA A+ +++ M+ TRPD Y Sbjct: 349 HFKLAAVRDDDECIDNN---ALPYASAVGNIMYAMIGTRPDLAY 389 Score = 73.4 bits (177), Expect(2) = 7e-011 Identities = 43/128 (33%), Positives = 72/128 (55%), Gaps = 6/128 (4%) Frame = -3 Query: 87863 QQKYVKELLKRFKMDDAKQIDTPIAPATKL-----DLEGIGSTVEQKLYRGMIGSLLY-L 87702 Q +Y+ +++RF M +AK +PI KL D E I + Y +G+++Y + Sbjct: 323 QARYIHNVVQRFNMAEAKVTRSPIGAHFKLAAVRDDDECIDNNALP--YASAVGNIMYAM 380 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RPD+ +++ L +R+ P H +AVK IL Y++G+ DL + + K F + Y D Sbjct: 381 IGTRPDLAYAICLVSRYMARPGNIHWEAVKWILRYMRGSQDLNLVFTKEKEFRVTRYCDS 440 Query: 87521 DYVGYLVDRKSTTG 87480 DY L R+S +G Sbjct: 441 DYAADLDRRRSVSG 454 Score = 22.7 bits (47), Expect(2) = 7e-011 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVL 87361 +G +S + Q+ ALST EAE++A + L Sbjct: 459 VGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEAL 494 >gb|AAD09019.1| (AF090446) copia protein [Zea mays] Length = 447 Score = 160 bits (400), Expect(2) = 4e-068 Identities = 81/132 (61%), Positives = 95/132 (71%) Frame = -3 Query: 87875 TWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLTA 87696 T+I Q KY ++LLKRF M DAK TP+ DL G +V+QK YR MIGSLLYL A Sbjct: 225 TFITQTKYTQDLLKRFGMKDAKPAKTPMGTNGHTDLNKGGKSVDQKAYRSMIGSLLYLCA 284 Query: 87695 SRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVDY 87516 SRPDI+ SV +CARFQ++PKE H+ AVKRIL YL T G+WY KGSNFDL+GY D DY Sbjct: 285 SRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVTTPCFGIWYPKGSNFDLIGYLDSDY 344 Query: 87515 VGYLVDRKSTTG 87480 G VDRKST+G Sbjct: 345 AGCKVDRKSTSG 356 Score = 129 bits (320), Expect(2) = 3e-034 Identities = 72/194 (37%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Frame = -2 Query: 4725 MDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT---- 4561 M +E+ + ++N+ W L P + + KWVFR K G R KA LV KG A Sbjct: 1 MQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQNEHGVVTRNKARLVAKGYAQVAGL 59 Query: 4560 DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGK 4381 D+ E F+PV +L SIRILL A + L QMD K+ FL+G + +E+Y++QP GF Sbjct: 60 DFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERF 119 Query: 4380 EHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLD 4201 VCKL+++LYGLKQAPR WY+ F+ + F + DP + K +Y+D Sbjct: 120 PDHVCKLSKALYGLKQAPRAWYECLRDFLIANTFKVGKADPTLFTKTCDGDLFVCQIYVD 179 Query: 4200 DMLIEGSSMRENNNLDKVV 4144 D++ ++ + +V+ Sbjct: 180 DIIFGSTNQKSCEEFSRVM 198 Score = 128 bits (318), Expect(2) = 4e-068 Identities = 58/88 (65%), Positives = 70/88 (78%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 FLG L+S SKKQ SVALSTAEAEYVAA CCAQ+LW++Q L DFG + +VP+ CDN Sbjct: 360 FLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNE 419 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDN 87208 SAI I +N ++H RTKH+DIRHHFLRD+ Sbjct: 420 SAIRIAENPIEHSRTKHIDIRHHFLRDH 447 Score = 46.1 bits (107), Expect(2) = 3e-034 Identities = 25/98 (25%), Positives = 53/98 (53%), Gaps = 5/98 (5%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ FEM +G LG ++ + + + +Q Y + +L RF + DAKP TP+ + Sbjct: 198 MTQKFEMSMMGELNYFLGFQVKQLKDDTFI--TQTKYTQDLLKRFGMKDAKPAKTPMGTN 255 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICS-----LVSVMVCTR 3855 + K+V+++ + +++ L +C+ ++SV +C R Sbjct: 256 GHTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCAR 298 >gb|AAA33420.1| (L35053) endonuclease [Pyricularia grisea] Length = 1199 Score = 248 bits (626), Expect(3) = 6e-068 Identities = 181/577 (31%), Positives = 272/577 (46%), Gaps = 30/577 (5%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y + +EHE +L++VL+ LR LYA +KCEF++ F G +V EG+++DP KI A Sbjct: 400 IYSRTRTEHEEHLKLVLEALRKAGLYANAAKCEFFVTETKFLGLLVGVEGVKMDPEKITA 459 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFS---TSATHLNLQDVSFMWLVKCDMSFLKL 38993 + W P +T+V +F+G ++YRRF+ FS T L +DV+F W C+ +F L Sbjct: 460 VLDWQTPKKLTDVQAFLGFGNFYRRFIRDFSKIVAPLTRLTKKDVAFEWNSACETAFRLL 519 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNY 38828 K T AP+L + DAS +L + G + + S++ E NY Sbjct: 520 KRKFTEAPVLAHFDWEKDVILETDASDYVSAGILSQYGDDGILRPVAFFSKKHTATECNY 579 Query: 38827 PTRDLELAVIVFALMIWRHYLYGVQ--YETYTDHMSLQDIMIQRDLNSR*CRWIELLKDY 38654 D EL I+ WR L G + TDH +L+ + LN R RW E L + Sbjct: 580 EIYDKELLAIIRCFEEWRPELEGTSSPVQIITDHRNLEYFTTTKMLNRRQARWAEFLSRF 639 Query: 38653 DLSILYHPGKKNMVAYSLSR-------------KQ*VWVVYPSYVCGERPLALDIQFSAN 38513 + I Y PGK+ +L+R K VV + RP L N Sbjct: 640 NFRITYRPGKQGAKPDALTRRSEDMPEEGDERLKHQTQVVLKEHNLPARPTRLQPIIRQN 699 Query: 38512 -------CMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQAT 38354 + LD Y + +++ +R + + L ++ Sbjct: 700 KPLLPRHLIELLDAGYESDPITQSALEALRTGADRHPKLQ---LAECEER---------- 746 Query: 38353 LDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DI 38174 G L + R+ VP + IL H+ + H G AK Y L + Y W GM + Sbjct: 747 ---SGYLYYRNRLYVPDSNNLKAEILRRCHDSPVAGHPGKAKTYDLLSREYYWPGMLHYV 803 Query: 38173 ADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVD 37994 + +V +C +++ G + L E W ++MDF+ LPQ S G D+I V+VD Sbjct: 804 SLWVKKCQTCRRINPSREGHQGLLRPLPTPERSWQHLSMDFITHLPQ-SNGHDAILVVVD 862 Query: 37993 QLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGT 37814 +LTK HF+P + + A +Y+ V + HG+P++I+SDRG+QF S F L Sbjct: 863 RLTKMRHFVPCKGTCNAEDTANLYLHHVWKLHGLPLTIVSDRGTQFVSKFWKHLTTRLKI 922 Query: 37813 RVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMV 37634 LS A HP+TD Q+E LE L V + + PLA+F NS Sbjct: 923 DSLLSTAHHPETDGQTERFNASLEQYLRAYVAYLQDDWESWLPLAEFTANSHKSETTGTS 982 Query: 37633 LFVALYG 37613 F A YG Sbjct: 983 PFYATYG 989 Score = 207 bits (521), Expect = 2e-050 Identities = 112/272 (41%), Positives = 155/272 (56%) Frame = +2 Query: 56432 PPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVT 56611 P Y M+ EL LK L L KGFIRPS++ + VLFVKK+ R C++YR LN +T Sbjct: 246 PLYAMSREELIALKEWLTAELKKGFIRPSSSSVASPVLFVKKQGGGLRFCVDYRALNNIT 305 Query: 56612 LKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKS 56791 +K++Y +P + + + + G FSKID+ S + ++I TAF TR G YE LV Sbjct: 306 VKDRYPLPLVRETLNNLAGMKFFSKIDIVSAFNNIRIKKGEEYLTAFRTRFGLYESLVMP 365 Query: 56792 FGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLY 56971 FGL APA F +N + YL++F ++DDILIYS++R LY Sbjct: 366 FGLTGAPATFQRYINDSLREYLDVFCTAYLDDILIYSRTRTEHEEHLKLVLEALRKAGLY 425 Query: 56972 AKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRF 57151 A KCEF + FLG +V +GV +D KI AV W P ++DV +F+G ++YRRF Sbjct: 426 ANAAKCEFFVTETKFLGLLVGVEGVKMDPEKITAVLDWQTPKKLTDVQAFLGFGNFYRRF 485 Query: 57152 I*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 I FS I LT LTK++V F W+ CE +F+ Sbjct: 486 IRDFSKIVAPLTRLTKKDVAFEWNSACETAFR 517 Score = 112 bits (277), Expect = 9e-022 Identities = 61/158 (38%), Positives = 91/158 (56%) Frame = +1 Query: 69496 PEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIV 69675 PE + +++D + L ++ G D I V+V+RLTK HFVP + T N + A +Y+ + Sbjct: 833 PERSWQHLSMDFITHLPQSNGH-DAILVVVDRLTKMRHFVPCKGTCNAEDTANLYLHHVW 891 Query: 69676 RLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*A 69855 +LHG+ ++I+SDRGT+F+S FW + L LST HP+TD Q+E LE L A Sbjct: 892 KLHGLPLTIVSDRGTQFVSKFWKHLTTRLKIDSLLSTAHHPETDGQTERFNASLEQYLRA 951 Query: 69856 CVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 V + W+ +LPL EF N+ + +PF A YG Sbjct: 952 YVAYLQDDWESWLPLAEFTANSHKSETTGTSPFYATYG 989 Score = 95.2 bits (233), Expect(2) = 8e-034 Identities = 68/198 (34%), Positives = 105/198 (52%), Gaps = 19/198 (9%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 +AG FSKID+ S ++ +++++ + TAF+TR+G YE LVM F LT A ATF +N Sbjct: 322 LAGMKFFSKIDIVSAFNNIRIKKGEEYLTAFRTRFGLYESLVMPFGLTGAPATFQRYIND 381 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY 68391 + R+Y + EHE HL+ V L++ LY +KCE +++ + ++ Sbjct: 382 SLREYLDVFCTAYLDDILIYSRTRTEHEEHLKLVLEALRKAGLYANAAKCEFFVT-ETKF 440 Query: 68392 HG------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLST-------------IYDFLSI 68514 G G + D + + L + P +L I DF I Sbjct: 441 LGLLVGVEGVKMDPEK--------ITAVLDWQTPKKLTDVQAFLGFGNFYRRFIRDFSKI 492 Query: 68515 ASTLTRLT*KEVTFLWSDECEVSFQKLKT*LTTARIL 68625 + LTRLT K+V F W+ CE +F+ LK T A +L Sbjct: 493 VAPLTRLTKKDVAFEWNSACETAFRLLKRKFTEAPVL 529 Score = 90.1 bits (220), Expect = 4e-015 Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 12/212 (5%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 LV E + +DP+KI + DW P + + +FLG +YRR S I P Sbjct: 444 LVGVEGVKMDPEKITAVLDWQTPKKLTDVQAFLGFGNFYRRFIRDFSKIVAPLTRLTKKD 503 Query: 68537 XXXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKG--- 68707 S T+ RL+ + +L F W + V+L DAS +L Q G Sbjct: 504 VAFEWNSACETAFRLLKRKFTEAPVLAHF---DWEKDVILETDASDYVSAGILSQYGDDG 560 Query: 68708 --KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAV--FTNHRSLQYIF 68875 + VA+ S++ E Y I+D EL+ ++ + W L G V T+HR+L+Y Sbjct: 561 ILRPVAFFSKKHTATECNYEIYDKELLAIIRCFEEWRPELEGTSSPVQIITDHRNLEYFT 620 Query: 68876 NQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSM 69007 + L R+ W E L ++ I Y PGK DAL+ ++ M Sbjct: 621 TTKMLNRRQARWAEFLSRFNFRITYRPGKQGAKPDALTRRSEDM 664 Score = 78.4 bits (190), Expect(2) = 8e-034 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = +2 Query: 67697 VSEFLEVF-PTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 + EF +VF P + +PP D +I + G P F P Y ++ EL +K+ L L K Sbjct: 209 IREFADVFSPQEAEKLPPHRPSDHHIPLIEGKTPPFGPLYAMSREELIALKEWLTAELKK 268 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQG 68041 FIR S SS +P+LFVK++ + C+DYR LN IT+ + YP+P + + + L G Sbjct: 269 GFIRPSSSSVASPVLFVKKQGGGLRFCVDYRALNNITVKDRYPLPLVRETLNNLAG 324 Score = 65.2 bits (156), Expect = 1e-007 Identities = 35/98 (35%), Positives = 52/98 (52%), Gaps = 2/98 (2%) Frame = +1 Query: 57373 ITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGVKC--EVYTDHRSLPYVFTQKD 57546 + + S++ E NY +D +L A++ ++WR L G ++ TDHR+L Y T K Sbjct: 565 VAFFSKKHTATECNYEIYDKELLAIIRCFEEWRPELEGTSSPVQIITDHRNLEYFTTTKM 624 Query: 57547 LNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 LN R+ RW E L + I Y GK DAL+R+ M Sbjct: 625 LNRRQARWAEFLSRFNFRITYRPGKQGAKPDALTRRSEDM 664 Score = 51.2 bits (120), Expect = 0.002 Identities = 31/101 (30%), Positives = 49/101 (47%), Gaps = 3/101 (2%) Frame = +3 Query: 57852 LRYGIARRGKEAVIDEE---GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMY 58022 LR G R K + + E G L + R+ VP ++L IL H S + HPG K Y Sbjct: 728 LRTGADRHPKLQLAECEERSGYLYYRNRLYVPDSNNLKAEILRRCHDSPVAGHPGKAKTY 787 Query: 58023 HDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 L + + W M H + +V +C C+++ + G L+ +P Sbjct: 788 DLLSREYYWPGMLHYVSLWVKKCQTCRRINPSREGHQGLLRPLP 831 Score = 36.0 bits (81), Expect(3) = 6e-068 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = -3 Query: 37523 ESIQDRLRITQSRHQSYADLRR*PLR-FSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGP 37347 E + + Q+R++ A+ R P R +V ++L + + KL + +GP Sbjct: 1023 EQARAEMTAAQARYEEQANRHRTPARRLTVGQYVWLDA---RNIQTARPQKKLDWKNLGP 1079 Query: 37346 FEILRIAGEVAYELDLPPTFSAIHPVF 37266 F I + AY LDLP + +HPVF Sbjct: 1080 FRISEVISPYAYRLDLPSSM-RVHPVF 1105 Score = 24.7 bits (52), Expect(3) = 6e-068 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 Y+ L +P F AP+ F + R LD F ++DDIL+ Sbjct: 359 YESLVMP---FGLTGAPATFQRYINDSLREYLDVFCTAYLDDILI 400 >gb|AAC26250.1| (AF077408) contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] Length = 964 Score = 193 bits (485), Expect(2) = 6e-068 Identities = 105/239 (43%), Positives = 148/239 (60%), Gaps = 8/239 (3%) Frame = -2 Query: 4890 EEVTREQVLRRSSRTIRAPDRYSHSL---HYLLLIDEGEPESFDEALQVEDSIKWELAMD 4720 E + E +RRS R+ PDR+ + H L +I+ EP S++EAL DS KW A Sbjct: 403 EPILVEPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAK 462 Query: 4719 DEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKRR-FKAHLVVKG*----ATDY 4555 EM S+ +N W L DLP G + + KW+F+ K DG + +KA LV KG DY Sbjct: 463 SEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDY 522 Query: 4554 AEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEH 4375 E +SPV L SIRILL A + + QMD KT FL+G+L++ +YM QP+GF VP Sbjct: 523 DETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAAR 582 Query: 4374 MVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDM 4195 VCKL RS+YGLKQA R W +F+ + + +F + E++PC Y K ++ FL+LY+DD+ Sbjct: 583 KVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDI 642 Query: 4194 LIEGSSM 4174 L+ G+ + Sbjct: 643 LLLGNDI 649 Score = 185 bits (464), Expect = 1e-043 Identities = 119/346 (34%), Positives = 176/346 (50%), Gaps = 15/346 (4%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFDSTGY-------AAVFGK-----GSWKIVKGVIVVARGTN 5946 L + Y+P I KN+ISV D G+ F + GS + G+ V+ + Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQSMP 64 Query: 5945 SGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCES 5766 + T + ++ + LWH RLGH++ K ++ L + G L CES Sbjct: 65 IYNIRTK------KFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCES 118 Query: 5765 CVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYF 5586 C++GK + FT LL + HTDV GP S+ G ++++TF DFSR +VY Sbjct: 119 CLLGKMTKAPFTGHSERA-SDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYL 177 Query: 5585 LKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGK 5406 +KH S F FK+++ EV+NQ +K LRSD GGEY F+ GI PG Sbjct: 178 MKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGT 237 Query: 5405 ARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVW 5226 + NG+ ER N+ L + RSM + +P FW + T A+++NR PS + K E+W Sbjct: 238 PQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVE-KTPYEIW 296 Query: 5225 IRKELKYSHLRTFGCTTYVHVDPEKR---NKLNVKAVKCYLIGYGSNLFGYRFWDDKNRK 5055 K S L+ +GC +Y KR +KL K+ KCY +GY GY F+ + K Sbjct: 297 TGKVPNLSFLKIWGCESYA-----KRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNK 351 Query: 5054 I 5052 + Sbjct: 352 V 352 Score = 94.4 bits (231), Expect(2) = 6e-068 Identities = 48/105 (45%), Positives = 69/105 (65%) Frame = -3 Query: 4163 TIWTRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTT 3984 ++ T L + F MKD+G A ILG++I RDR + LSQ+ YI+KVL RF ++D+K Sbjct: 654 SVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFI 713 Query: 3983 PLANHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 P+++ LSK Q P T +ER M+ +PYA AI S++ M+ TRPD Sbjct: 714 PMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPD 758 Score = 82.7 bits (201), Expect(2) = 4e-025 Identities = 43/135 (31%), Positives = 81/135 (59%), Gaps = 7/135 (5%) Frame = -2 Query: 87495 KKHYRNDSFLGSCL----IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGL 87328 K +R+ S CL +S S KQ++VA ST EAEY+AA+ +V+WI++ +++ G+ Sbjct: 818 KDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGV 877 Query: 87327 KIE---QVPIFCDNTSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQI 87157 + ++CDN AI K H+++KH+ R+H +R+ +++G + ++ + + + Sbjct: 878 VPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANV 937 Query: 87156 ADIFTMSLAREHFERNRLELGM 87091 AD FT L + E + +G+ Sbjct: 938 ADHFTKPLPQPKHESHTTAIGI 959 Score = 75.3 bits (182), Expect(3) = 9e-024 Identities = 40/131 (30%), Positives = 72/131 (54%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T Q NG ER+++ LL++ R+++ + LP+ +WG + T+ +++NR + + K +++ Sbjct: 237 TPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-EKTPYEI 295 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHV 65345 K P S+LK++GC + DK P++ F+GYP T GY + K+ V Sbjct: 296 WTGKVPNLSFLKIWGCESY-AKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFV 354 Query: 65346 SRDVSFYENVF 65378 R+ +F E F Sbjct: 355 VRNGAFLEREF 365 Score = 61.7 bits (147), Expect(2) = 4e-025 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMIGSLL 87708 + Q Y+ ++L RF M D+K+ P++ L ST +++ Y IGS++ Sbjct: 690 LSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIM 749 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ ++ + +R+Q++P ESH V+ I YL+ T D + Y + GY Sbjct: 750 YAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGY 809 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D + D +S +G Sbjct: 810 TDASFQTDKDDFRSQSG 826 Score = 60.5 bits (144), Expect = 4e-006 Identities = 34/93 (36%), Positives = 48/93 (51%) Frame = -2 Query: 88167 LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTC 87988 LWH RL H ++ + KL + L L ++ + CE+C LGK K+ F +S Sbjct: 83 LWHCRLGHINEKHIQKLHSDGL---LNSFDYESYETCESCLLGKMTKAPFTGHSERASDL 139 Query: 87987 SLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 L LIH D+CGPM +RG Y DD++R Sbjct: 140 -LGLIHTDVCGPMSTSARGNYQYFITFTDDFSR 171 Score = 55.8 bits (132), Expect(3) = 9e-024 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Frame = +1 Query: 64675 TTSSNRFFDLLRL---DLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIK 64845 T S R DLL L D+ P Y+YF+ DDFSR + L+ KS + + K Sbjct: 130 TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFK 189 Query: 64846 SFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 F + V NQF +IK++R+ G E++S + +L++ Sbjct: 190 EFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRE 225 Score = 28.6 bits (62), Expect(3) = 9e-024 Identities = 17/46 (36%), Positives = 25/46 (53%), Gaps = 5/46 (10%) Frame = +2 Query: 64526 YLWHNRLGHVSFIKMKGISSIHI-----SFSPKKHFVCTVCPMDR*TRSYF 64663 +LWH RLGH I K I +H SF + + C C + + T++ F Sbjct: 82 FLWHCRLGH---INEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPF 129 >emb|CAB80804.1| (AL161498) putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 193 bits (485), Expect(2) = 6e-068 Identities = 105/239 (43%), Positives = 148/239 (60%), Gaps = 8/239 (3%) Frame = -2 Query: 4890 EEVTREQVLRRSSRTIRAPDRYSHSL---HYLLLIDEGEPESFDEALQVEDSIKWELAMD 4720 E + E +RRS R+ PDR+ + H L +I+ EP S++EAL DS KW A Sbjct: 403 EPILVEPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAK 462 Query: 4719 DEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKRR-FKAHLVVKG*----ATDY 4555 EM S+ +N W L DLP G + + KW+F+ K DG + +KA LV KG DY Sbjct: 463 SEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDY 522 Query: 4554 AEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEH 4375 E +SPV L SIRILL A + + QMD KT FL+G+L++ +YM QP+GF VP Sbjct: 523 DETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAAR 582 Query: 4374 MVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDM 4195 VCKL RS+YGLKQA R W +F+ + + +F + E++PC Y K ++ FL+LY+DD+ Sbjct: 583 KVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDI 642 Query: 4194 LIEGSSM 4174 L+ G+ + Sbjct: 643 LLLGNDI 649 Score = 185 bits (464), Expect = 1e-043 Identities = 119/346 (34%), Positives = 176/346 (50%), Gaps = 15/346 (4%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFDSTGY-------AAVFGK-----GSWKIVKGVIVVARGTN 5946 L + Y+P I KN+ISV D G+ F + GS + G+ V+ + Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQSMP 64 Query: 5945 SGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCES 5766 + T + ++ + LWH RLGH++ K ++ L + G L CES Sbjct: 65 IYNIRTK------KFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCES 118 Query: 5765 CVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYF 5586 C++GK + FT LL + HTDV GP S+ G ++++TF DFSR +VY Sbjct: 119 CLLGKMTKAPFTGHSERA-SDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYL 177 Query: 5585 LKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGK 5406 +KH S F FK+++ EV+NQ +K LRSD GGEY F+ GI PG Sbjct: 178 MKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGT 237 Query: 5405 ARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVW 5226 + NG+ ER N+ L + RSM + +P FW + T A+++NR PS + K E+W Sbjct: 238 PQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVE-KTPYEIW 296 Query: 5225 IRKELKYSHLRTFGCTTYVHVDPEKR---NKLNVKAVKCYLIGYGSNLFGYRFWDDKNRK 5055 K S L+ +GC +Y KR +KL K+ KCY +GY GY F+ + K Sbjct: 297 TGKVPNLSFLKIWGCESYA-----KRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNK 351 Query: 5054 I 5052 + Sbjct: 352 V 352 Score = 94.4 bits (231), Expect(2) = 6e-068 Identities = 48/105 (45%), Positives = 69/105 (65%) Frame = -3 Query: 4163 TIWTRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTT 3984 ++ T L + F MKD+G A ILG++I RDR + LSQ+ YI+KVL RF ++D+K Sbjct: 654 SVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFI 713 Query: 3983 PLANHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 P+++ LSK Q P T +ER M+ +PYA AI S++ M+ TRPD Sbjct: 714 PMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPD 758 Score = 82.7 bits (201), Expect(2) = 4e-025 Identities = 43/135 (31%), Positives = 81/135 (59%), Gaps = 7/135 (5%) Frame = -2 Query: 87495 KKHYRNDSFLGSCL----IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGL 87328 K +R+ S CL +S S KQ++VA ST EAEY+AA+ +V+WI++ +++ G+ Sbjct: 818 KDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGV 877 Query: 87327 KIE---QVPIFCDNTSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQI 87157 + ++CDN AI K H+++KH+ R+H +R+ +++G + ++ + + + Sbjct: 878 VPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANV 937 Query: 87156 ADIFTMSLAREHFERNRLELGM 87091 AD FT L + E + +G+ Sbjct: 938 ADHFTKPLPQPKHESHTTAIGI 959 Score = 75.3 bits (182), Expect(3) = 9e-024 Identities = 40/131 (30%), Positives = 72/131 (54%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T Q NG ER+++ LL++ R+++ + LP+ +WG + T+ +++NR + + K +++ Sbjct: 237 TPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-EKTPYEI 295 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHV 65345 K P S+LK++GC + DK P++ F+GYP T GY + K+ V Sbjct: 296 WTGKVPNLSFLKIWGCESY-AKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFV 354 Query: 65346 SRDVSFYENVF 65378 R+ +F E F Sbjct: 355 VRNGAFLEREF 365 Score = 61.7 bits (147), Expect(2) = 4e-025 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMIGSLL 87708 + Q Y+ ++L RF M D+K+ P++ L ST +++ Y IGS++ Sbjct: 690 LSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIM 749 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ ++ + +R+Q++P ESH V+ I YL+ T D + Y + GY Sbjct: 750 YAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGY 809 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D + D +S +G Sbjct: 810 TDASFQTDKDDFRSQSG 826 Score = 60.5 bits (144), Expect = 4e-006 Identities = 34/93 (36%), Positives = 48/93 (51%) Frame = -2 Query: 88167 LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTC 87988 LWH RL H ++ + KL + L L ++ + CE+C LGK K+ F +S Sbjct: 83 LWHCRLGHINEKHIQKLHSDGL---LNSFDYESYETCESCLLGKMTKAPFTGHSERASDL 139 Query: 87987 SLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 L LIH D+CGPM +RG Y DD++R Sbjct: 140 -LGLIHTDVCGPMSTSARGNYQYFITFTDDFSR 171 Score = 55.8 bits (132), Expect(3) = 9e-024 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Frame = +1 Query: 64675 TTSSNRFFDLLRL---DLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIK 64845 T S R DLL L D+ P Y+YF+ DDFSR + L+ KS + + K Sbjct: 130 TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFK 189 Query: 64846 SFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 F + V NQF +IK++R+ G E++S + +L++ Sbjct: 190 EFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRE 225 Score = 28.6 bits (62), Expect(3) = 9e-024 Identities = 17/46 (36%), Positives = 25/46 (53%), Gaps = 5/46 (10%) Frame = +2 Query: 64526 YLWHNRLGHVSFIKMKGISSIHI-----SFSPKKHFVCTVCPMDR*TRSYF 64663 +LWH RLGH I K I +H SF + + C C + + T++ F Sbjct: 82 FLWHCRLGH---INEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPF 129 >gb|AAD30014.1|AF118254_1 (AF118254) homolog of IS2 protein [Escherichia coli] Length = 125 Score = 265 bits (669), Expect = 1e-067 Identities = 125/125 (100%), Positives = 125/125 (100%) Frame = +1 Query: 20887 LGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESF 21066 LGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESF Sbjct: 1 LGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESF 60 Query: 21067 VKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDN 21246 VKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDN Sbjct: 61 VKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDN 120 Query: 21247 RCLEI 21261 RCLEI Sbjct: 121 RCLEI 125 >gb|AAC33526.2| (AF030881) pol polyprotein [Takifugu rubripes] Length = 1187 Score = 252 bits (636), Expect(2) = 9e-067 Identities = 174/570 (30%), Positives = 272/570 (47%), Gaps = 12/570 (2%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH ++R+VLQ L + RL+ K KC F SV + G++V + +R DP KI+A+ W RP Sbjct: 442 EHHQHVRLVLQRLLENRLFIKAEKCIFHSASVGYLGYIVEEGRVRADPAKIQAVVEWPRP 501 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLN-LQDVS--FMWLVKCDMSFLKLKELITSA 38972 T T++ F+G + RRF++GFS A L+ L S F W + + +F LK+ T+A Sbjct: 502 TDRTQLRRFLGFAGFIRRFIKGFSQVAAPLSALTSTSRPFAWTPEAETAFSALKDRFTTA 561 Query: 38971 PILTLLVEGGGFTIYCDASGVGVDFVLMKQGWF------IDYVSRELKVHELNYPTRDLE 38810 P+L F + DAS G+ VL ++ Y SR E NY + E Sbjct: 562 PVLAHPDPARQFIVEVDASDAGIGAVLSQRSEADQKIHPCAYFSRRFDPAERNYDVGNRE 621 Query: 38809 LAVIVFALMIWRHYLYGVQYE--TYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILY 38636 L + AL+ W+H+L G ++ ++DH +L + + LN R RW L +D ++ + Sbjct: 622 LLAVYGALVEWKHWLEGAKHPFLVWSDHKNLTYVRTAKRLNPRQGRW-ALFSRFDFTLTF 680 Query: 38635 HPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV 38456 PG KN+ A +LSR+ +P G I A +GV Sbjct: 681 RPGSKNIRADALSRQ------FPEEFPGAPRDPDTIVPPAR---------------VIGV 719 Query: 38455 QSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQ-LI 38279 S W E + RD+ G+G Q GR+ VP+ S++ + Sbjct: 720 IS--------WPIETAVEQAQRDEPYPGNGPQ------------GRMFVPS---SVRPQV 756 Query: 38278 LSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFK 38099 L H ++ H G + +++ + W ++ D+ +FV C + K H G Sbjct: 757 LEWGHSSCFACHPGVRRTAEFVQRRFWWPNLQEDVREFVGACTVCARSKASHRSPAGLLH 816 Query: 38098 RLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYI 37919 L + W + +DFV GLP S+G D+I IVD+ +K HF+ + L S A + + Sbjct: 817 PLPVPSRPWSHVALDFVTGLP-VSQGNDTILTIVDRFSKGVHFVALPKLPSAAETAELLV 875 Query: 37918 WEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLED 37739 VVR HG+P+ ++SDRG QFTS F +G V LS+ +HPQ++ Q+E Q +E Sbjct: 876 SHVVRLHGIPLDVVSDRGPQFTSRVWQAFCKGIGATVSLSSGYHPQSNGQAERANQAMEA 935 Query: 37738 MLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYG 37613 L +F P +++ N++ S M F G Sbjct: 936 ALRCVTTSNPASWSKFLPWVEYSLNAMESSATGMSPFQCFLG 977 Score = 201 bits (505), Expect(2) = 4e-065 Identities = 104/269 (38%), Positives = 159/269 (58%) Frame = +2 Query: 56438 YRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLK 56617 Y ++ E ++ + E L G IRPS++P A FV K+D R CI++R+LN +T+K Sbjct: 283 YNLSIPEKEVMRNYITESLASGIIRPSSSPLAAGFFFVAKEDGGLRPCIDFRKLNNITVK 342 Query: 56618 NKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFG 56797 NKY +P + F+ + A VF+K+DL + Y ++I + KTAF T GH+E+LV FG Sbjct: 343 NKYPLPLMSSTFEPLTHARVFTKLDLRNAYHLVQIRKGDEWKTAFNTHLGHFEYLVMPFG 402 Query: 56798 LKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAK 56977 L NAPA F L+N + + + +FV+V++DDILI+S++ + L+ K Sbjct: 403 LSNAPAVFQELVNDVLRDMINVFVVVYLDDILIFSRTMEEHHQHVRLVLQRLLENRLFIK 462 Query: 56978 FFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI* 57157 KC F ASV +LG++V + V D +KI+AV W +PT+ + + F+G A + RRFI Sbjct: 463 AEKCIFHSASVGYLGYIVEEGRVRADPAKIQAVVEWPRPTDRTQLRRFLGFAGFIRRFIK 522 Query: 57158 VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 FS +A L+ LT + PF W+ E E +F Sbjct: 523 GFSQVAAPLSALTSTSRPFAWTPEAETAF 551 Score = 110 bits (272), Expect = 3e-021 Identities = 115/432 (26%), Positives = 194/432 (44%), Gaps = 25/432 (5%) Frame = +2 Query: 67694 VVSEFLEVFPTDLP-DVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLN 67870 + ++ VF D +PP D ID+ G Y ++ E + M++ + + L Sbjct: 243 IYNDLAPVFSKDNALSLPPHWPYDCPIDLLPGAPYPTGRLYNLSIPEKEVMRNYITESLA 302 Query: 67871 KVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 IR S S A FV ++D + CID+R+LN IT+ N YP+P + F+ L A V Sbjct: 303 SGIIRPSSSPLAAGFFFVAKEDGGLRPCIDFRKLNNITVKNKYPLPLMSSTFEPLTHARV 362 Query: 68051 SPRLT*DRAIIS*SLGRRISLRQLFKHVMA-----ITSF**CILN*LTPMQLLWT**IER 68215 +L A + + + F + + F + N Q L + Sbjct: 363 FTKLDLRNAYHLVQIRKGDEWKTAFNTHLGHFEYLVMPF--GLSNAPAVFQELVNDVLRD 420 Query: 68216 SDNIWI-----PLLLYSLMIY*YNHAVRRNMSII*GPCLGF*RRKSFTRSFQSVRFGLVS 68380 N+++ +L++S + ++ VR + + L K S G + Sbjct: 421 MINVFVVVYLDDILIFSRTMEEHHQHVRLVLQRLLENRLFIKAEKCIFHSASVGYLGYIV 480 Query: 68381 KED-IMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXX 68542 +E + DP KI+ + +W RP Q+ FLG AG+ RR S ++ P Sbjct: 481 EEGRVRADPAKIQAVVEWPRPTDRTQLRRFLGFAGFIRRFIKGFSQVAAPLSALTSTSRP 540 Query: 68543 XX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV--- 68713 T+ + +L P + ++ +DAS G+G VL Q+ + Sbjct: 541 FAWTPEAETAFSALKDRFTTAPVLAHPDP---ARQFIVEVDASDAGIGAVLSQRSEADQK 597 Query: 68714 ---VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVH--FAVFTNHRSLQYIFN 68878 AY SR+ E+ Y + + EL+ V AL W ++L G F V+++H++L Y+ Sbjct: 598 IHPCAYFSRRFDPAERNYDVGNRELLAVYGALVEWKHWLEGAKHPFLVWSDHKNLTYVRT 657 Query: 68879 QRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 + L R+ W L +D T+ + PG N+ ADALS Sbjct: 658 AKRLNPRQGRW-ALFSRFDFTLTFRPGSKNIRADALS 693 Score = 97.1 bits (238), Expect(2) = 2e-019 Identities = 51/151 (33%), Positives = 82/151 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 +A+D V L + G D I IV+R +K HFV + + + A++ + +VRLHG+ + Sbjct: 828 VALDFVTGLPVSQGN-DTILTIVDRFSKGVHFVALPKLPSAAETAELLVSHVVRLHGIPL 886 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 ++SDRG +F S W + K +G V LS+ +HPQ++ Q+E Q +E L Sbjct: 887 DVVSDRGPQFTSRVWQAFCKGIGATVSLSSGYHPQSNGQAERANQAMEAALRCVTTSNPA 946 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 W +FLP VE++ N + M+PF+ G Sbjct: 947 SWSKFLPWVEYSLNAMESSATGMSPFQCFLG 977 Score = 91.3 bits (223), Expect = 2e-015 Identities = 71/203 (34%), Positives = 100/203 (48%), Gaps = 13/203 (6%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+K+DLR+ YH +++R+ D KTAF T GH+E+LVM F L+NA A F +L+N R Sbjct: 363 FTKLDLRNAYHLVQIRKGDEWKTAFNTHLGHFEYLVMPFGLSNAPAVFQELVNDVLRDMI 422 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHGGSEK 68409 EEH H+R V L E +L+ K KC I+ S Y G + Sbjct: 423 NVFVVVYLDDILIFSRTMEEHHQHVRLVLQRLLENRLFIKAEKC-IFHSASVGYLGYIVE 481 Query: 68410 D*DN*RLD*TCFSYSDLKFLRPC------RLLS-------TIYDFLSIASTLTRLT*KEV 68550 + R D + +++ RP R L I F +A+ L+ LT Sbjct: 482 E-GRVRAD-PAKIQAVVEWPRPTDRTQLRRFLGFAGFIRRFIKGFSQVAAPLSALTSTSR 539 Query: 68551 TFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVV 68658 F W+ E E +F LK TTA +L P F+V Sbjct: 540 PFAWTPEAETAFSALKDRFTTAPVLAHPDPARQFIV 575 Score = 77.3 bits (187), Expect(2) = 4e-065 Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNV------ITYASRQLKVHEHNYPTHDLDLAAVVFALKQW 57468 FIV D S +G+GAVL Y SR+ E NY + +L AV AL +W Sbjct: 573 FIVEVDASDAGIGAVLSQRSEADQKIHPCAYFSRRFDPAERNYDVGNRELLAVYGALVEW 632 Query: 57469 RHYLYGVKCE--VYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADA 57642 +H+L G K V++DH++L YV T K LN R+ RW L D T+ + G N+ ADA Sbjct: 633 KHWLEGAKHPFLVWSDHKNLTYVRTAKRLNPRQGRW-ALFSRFDFTLTFRPGSKNIRADA 691 Query: 57643 LSRK 57654 LSR+ Sbjct: 692 LSRQ 695 Score = 51.5 bits (121), Expect = 0.002 Identities = 21/64 (32%), Positives = 34/64 (52%) Frame = +3 Query: 57963 ILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTL 58142 +L HSS ++ HPG + +++ F W +Q D+ +FV C C + K H+ P G L Sbjct: 756 VLEWGHSSCFACHPGVRRTAEFVQRRFWWPNLQEDVREFVGACTVCARSKASHRSPAGLL 815 Query: 58143 KRMP 58154 +P Sbjct: 816 HPLP 819 Score = 31.7 bits (70), Expect(2) = 9e-067 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+ F +L+ + R ++ FV++++DDIL+ +E Sbjct: 401 FGLSNAPAVFQELVNDVLRDMINVFVVVYLDDILIFSRTME 441 Score = 28.2 bits (61), Expect(2) = 2e-019 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = +2 Query: 69395 MKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 ++ D+ +FV C C + K H+ P G+ +P Sbjct: 787 LQEDVREFVGACTVCARSKASHRSPAGLLHPLP 819 >gb|AAC62132.1| (AC005169) copia-like retroelement pol polyprotein [Arabidopsis thaliana] Length = 1137 Score = 186 bits (468), Expect(2) = 4e-066 Identities = 105/213 (49%), Positives = 143/213 (66%), Gaps = 9/213 (4%) Frame = -2 Query: 4809 YLLLIDEGEPE--SFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKW 4636 Y++ D G PE + +ALQ D W A+D+E+ SL KN+TWVL + ++ + KW Sbjct: 623 YMITEDGGNPEPNDYQKALQDSDYKMWLKAVDEEIESLLKNNTWVLVNRDQFQKPIGCKW 682 Query: 4635 VFRIKT*PDG--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHL 4474 VF+ K+ G K RFKA LVVKG + DY EIFSPVVK SIR+LL +V +M L Sbjct: 683 VFKRKSGIVGVEKPRFKARLVVKGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMEL 742 Query: 4473 EQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFM 4294 +QMD KT FLHG LD+ IY++QP+G+V VC L RSLYGL+Q+PRQW +F+ FM Sbjct: 743 QQMDVKTAFLHGYLDETIYIEQPEGYVHKRYPDKVCLLKRSLYGLRQSPRQWNNRFNEFM 802 Query: 4293 TKSEFCKAEKDPCCYFKK-YTNSYVFLLLYLDDMLIEGSSMR 4171 K + +++ D C YFK+ + Y++LLLY+DD+LI R Sbjct: 803 QKIGYERSKYDSCVYFKELQSGEYIYLLLYVDDILIASRDKR 844 Score = 161 bits (402), Expect = 2e-036 Identities = 85/204 (41%), Positives = 114/204 (55%) Frame = -3 Query: 5615 DFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKG 5436 D+SRKVWVYFLK + FA+F +WK VE QS K+K LR+DNG E+ F C +G Sbjct: 320 DWSRKVWVYFLKTKDEAFASFTEWKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKKEG 379 Query: 5435 IRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVP 5256 I R +QNG+ ER+N+ + RSM G+ K FWA ST YLINR PS Sbjct: 380 IVRHRTCTYTPQQNGVAERLNRTIMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPSSS 439 Query: 5255 LGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 + KI EE+W +S L+ FGC YV+ + KL+ +A K +GY + + G+R Sbjct: 440 IENKIPEELWTSAVPNFSGLKRFGCVVYVY---SQEGKLDPRAKKGVFVGYPNGVKGFRV 496 Query: 5075 WDDKNRKILRHCDVTFDESVMYKD 5004 W + + +V F E VMYKD Sbjct: 497 WMIEEERCSISRNVVFREDVMYKD 520 Score = 94.8 bits (232), Expect(2) = 4e-066 Identities = 49/100 (49%), Positives = 66/100 (66%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L++ FEMKDLG AK+ILGM+I RDR A T+++SQE Y+ KVL F ++ AKP TP+ H Sbjct: 853 LNSEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLKVLGNFGMDQAKPVFTPMGAH 912 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 FKL + + + M VPY A+ SL+ M+ TRPD Sbjct: 913 FKLKPATDEEVMRQSEVMRAVPYQSAVGSLMYSMIGTRPD 952 Score = 90.1 bits (220), Expect(2) = 3e-034 Identities = 46/109 (42%), Positives = 68/109 (62%) Frame = -2 Query: 87423 VALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTSAINIVKNLVQHKRTK 87244 VALS+ EAEY+A + +W+K +S+ G + V I CD+ SAI + KN V H+RTK Sbjct: 1024 VALSSTEAEYMALTDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVYHERTK 1083 Query: 87243 HVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERNRLEL 87097 H+D+++HF+RD V G++ + E+ ADIFT L F+ + LEL Sbjct: 1084 HIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQ-DALEL 1131 Score = 85.0 bits (207), Expect(3) = 5e-020 Identities = 44/131 (33%), Positives = 75/131 (56%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ ++ R++L +S L ++W + T YLINR +S + NK + Sbjct: 388 YTPQQNGVAERLNRTIMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPSSSIENKIPEE 447 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + + P +S LK FGC+ + + S + K +PR +F+GYP G++V ++ Sbjct: 448 LWTSAVPNFSGLKRFGCVVY--VYSQEGKLDPRAKKGVFVGYPNGVKGFRVWMIEEERCS 505 Query: 65343 VSRDVSFYENV 65375 +SR+V F E+V Sbjct: 506 ISRNVVFREDV 516 Score = 84.7 bits (206), Expect(2) = 3e-034 Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 7/131 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIA------PATKLDLEGIGSTVEQKLYRGMIGSLL 87708 I Q+ Y+ ++L F MD AK + TP+ PAT ++ + Y+ +GSL+ Sbjct: 884 ISQEGYLLKVLGNFGMDQAKPVFTPMGAHFKLKPATDEEVMRQSEVMRAVPYQSAVGSLM 943 Query: 87707 Y-LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y + +RPD+ SVGL RF + P + H QAVK IL Y++G+ D + Y L GY Sbjct: 944 YSMIGTRPDLAHSVGLVCRFMSKPLKEHWQAVKWILRYIRGSIDRKLCYKNEGELILEGY 1003 Query: 87530 ADVDYVGYLVDRKSTTGM 87477 D DY R+ST+G+ Sbjct: 1004 CDSDYAADKEGRRSTSGV 1021 Score = 64.4 bits (154), Expect = 2e-007 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 8/224 (3%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 ++N +M ++ ++ ++++EF ++S LN++ I DE++A++++S+LP+S+D + + Sbjct: 92 VYNYRMQDSKTLEENVDEFQKMISDLNNLQIQVPDEVQAILILSALPDSYDMLKETL--K 149 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENL 6435 G E +K D++ SK + E+RDSSG + V + K Q D + Sbjct: 150 YGREGIKLDDVISAAKSKEL---ELRDSSGGSRPVGEGLYVRGKSQARGSDGPK------ 200 Query: 6434 RTDQT*LV*IVEKNDTFGR-AIQSQRRNRIKNLEMTMIL*IQQRTLGML*FLV*TALLNH 6258 T+ + I K F R + +N+ T + ++ ++ + ++ Sbjct: 201 STEGKKVCWICGKEGHFKRQCYKWLEKNKANGAGETAL--VKDDAQDLVGLVASEVNMSE 258 Query: 6257 G-----FWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDV 6123 G WI+ H +P KE +F GKV +A+N E++G G V Sbjct: 259 GKDDQEEWIMDTGCSFHMTPRKEYLMDFVEAKSGKVRMANNSFSEVKGIGKV 310 Score = 39.9 bits (91), Expect(3) = 5e-020 Identities = 19/60 (31%), Positives = 30/60 (49%) Frame = +1 Query: 64777 DDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 +D+SR W L K + + +V Q +K +RT NGLEF +H+ + KK+ Sbjct: 319 NDWSRKVWVYFLKTKDEAFASFTEWKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKKE 378 Score = 21.9 bits (45), Expect(3) = 5e-020 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 Query: 64949 KKKGKIHQRSCPYAP 64993 KK+G + R+C Y P Sbjct: 376 KKEGIVRHRTCTYTP 390 >dbj|BAA75237.1| (AB014751) polyprotein [Ipomoea nil] Length = 265 Score = 240 bits (607), Expect(2) = 9e-062 Identities = 121/249 (48%), Positives = 166/249 (66%), Gaps = 3/249 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S +H+ +LR+VL LR+ +LYAK SKCEFWL V F GHV+S +G+ VDP + A Sbjct: 14 IYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTA 73 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + +P +VT++ SF+G+ YYRRF+E FS A T L ++ F+W +C+ +F L Sbjct: 74 VTDGKQPKTVTQIRSFLGVAGYYRRFIENFSEIARPMTQLLKKEEEFVWSPQCEKAFQTL 133 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 KE + S+P+L L F ++CDA G+ VLM+ G + Y SR+L+ HE NYPT DL Sbjct: 134 KEKLVSSPVLILPDTRKDFMVHCDALRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDL 193 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 E A +V AL I RH+L G + E YTDH SL+ I Q DLN R RW+EL+KDYD+ I +H Sbjct: 194 ESAAVVHALKIRRHHLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHHH 253 Query: 38632 PGKKNMVAYSLS 38597 PGK N+VA +LS Sbjct: 254 PGKANVVADALS 265 Score = 161 bits (402), Expect = 2e-036 Identities = 97/206 (47%), Positives = 126/206 (61%), Gaps = 6/206 (2%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 ++S + + VDP+ + + D +P +V QI SFLG+AGYYRR S I+ P Sbjct: 58 VISAKGVAVDPETVTAVTDGKQPKTVTQIRSFLGVAGYYRRFIENFSEIARPMTQLLKKE 117 Query: 68537 XXXX*L-SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKV 68713 C L K L+L R+ +++ DA + GLGCVLMQ G V Sbjct: 118 EEFVWSPQCEKAFQTLKEKLVSSPVLILP----DTRKDFMVHCDALRQGLGCVLMQDGHV 173 Query: 68714 VAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLK 68893 VAYASRQL+ HE Y HDLE VV ALKI ++L G ++T+H+SL+YIF Q DL Sbjct: 174 VAYASRQLRPHEGNYPTHDLESAAVVHALKIRRHHLIGNRCEIYTDHKSLKYIFTQSDLN 233 Query: 68894 LRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 LR+R WLEL+KDYD+ I +HPGK NVVADALS Sbjct: 234 LRQRRWLELIKDYDVGIHHHPGKANVVADALS 265 Score = 160 bits (401), Expect(2) = 6e-066 Identities = 77/121 (63%), Positives = 95/121 (77%) Frame = +1 Query: 57286 LASGR*NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 L R +F+V+CD GLG VLM + +V+ YASRQL+ HE NYPTHDL+ AAVV ALK Sbjct: 145 LPDTRKDFMVHCDALRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLESAAVVHALKI 204 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 RH+L G +CE+YTDH+SL Y+FTQ DLNLR+RRW+EL+KD D+ I +H GKANVVADAL Sbjct: 205 RRHHLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHHHPGKANVVADAL 264 Query: 57646 S 57648 S Sbjct: 265 S 265 Score = 120 bits (298), Expect(2) = 6e-066 Identities = 62/131 (47%), Positives = 80/131 (60%) Frame = +2 Query: 56855 LELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVS 57034 L+ FV+VFIDDILIYS+S + LYAK KCEF L+ V FLGHV+S Sbjct: 1 LDEFVVVFIDDILIYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVIS 60 Query: 57035 KDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPF 57214 GV VD + AV +P V+ + SF+G+A YYRRFI FS IA +T L K+ F Sbjct: 61 AKGVAVDPETVTAVTDGKQPKTVTQIRSFLGVAGYYRRFIENFSEIARPMTQLLKKEEEF 120 Query: 57215 IWSGECEESFQ 57247 +WS +CE++FQ Sbjct: 121 VWSPQCEKAFQ 131 Score = 73.4 bits (177), Expect = 5e-010 Identities = 52/127 (40%), Positives = 76/127 (58%), Gaps = 13/127 (10%) Frame = +1 Query: 68281 KEEHEHHLRTVFGILKEKKLYTKFSKCEIWLS-VQRRYHGGSEKD*DN*RLD-*TCFSYS 68454 +E+H+HHLR V G L+E +LY K SKCE WLS V+ H S K +D T + + Sbjct: 19 EEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAK---GVAVDPETVTAVT 75 Query: 68455 DLKFLRPCRLLST-----------IYDFLSIASTLTRLT*KEVTFLWSDECEVSFQKLKT 68601 D K + + + I +F IA +T+L KE F+WS +CE +FQ LK Sbjct: 76 DGKQPKTVTQIRSFLGVAGYYRRFIENFSEIARPMTQLLKKEEEFVWSPQCEKAFQTLKE 135 Query: 68602 *LTTARILTLPVEREGFVVY 68661 L ++ +L LP R+ F+V+ Sbjct: 136 KLVSSPVLILPDTRKDFMVH 155 Score = 26.2 bits (56), Expect(2) = 9e-062 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = -3 Query: 39383 LDSFVIIFMDDILV 39342 LD FV++F+DDIL+ Sbjct: 1 LDEFVVVFIDDILI 14 >gb|AAC64917.1| (AF053008) gag-pol polyprotein [Glycine max] Length = 1550 Score = 192 bits (483), Expect = 6e-046 Identities = 125/411 (30%), Positives = 196/411 (47%), Gaps = 13/411 (3%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + KE N + + V D +I G G K +L+ V + G+ N Sbjct: 545 HMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMG----KLVHDGLPSLNKVLLVKGLTAN 600 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVI-VVARGTNSGTLYTTLGCINMDVVAESVSGSC 5874 LIS+ Q G+ F K + V+ +G+ S C S S +C Sbjct: 601 LISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKD-----NCYLWTPQETSYSSTC 655 Query: 5873 L---------WHNRLGHMSAKGMKMLVAKGALEG---LKSFDMGLCESCVMGKQKRVSFT 5730 L WH R GH+ +GMK ++ KGA+ G LK + +C C +GKQ ++S Sbjct: 656 LFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSNQ 715 Query: 5729 KTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFK 5550 K + +L++ H D+ GP V SLG R+ + DFSR WV F++ SD F FK Sbjct: 716 KLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNFIREKSDTFEVFK 775 Query: 5549 KWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNK 5370 + ++ + +KR+RSD+G E++ S FT FC ++GI + +QNGI ER N+ Sbjct: 776 ELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNR 835 Query: 5369 ILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRT 5190 L E AR M +P WA ++T Y+ NR L E+W ++ H Sbjct: 836 TLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHI 895 Query: 5189 FGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMY 5010 G Y+ D E+R K++ K+ +GY +N YR ++ + R ++ +V D+ Sbjct: 896 CGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPA 955 Query: 5009 KDKE 4998 + K+ Sbjct: 956 RKKD 959 Score = 143 bits (357), Expect = 4e-031 Identities = 85/238 (35%), Positives = 123/238 (50%), Gaps = 1/238 (0%) Frame = -2 Query: 88596 LIFQEEVRES-KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG 88420 L+ +R S K+ WY+DS CSRHMTG K +++E Sbjct: 522 LVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 581 Query: 88419 RSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHI 88240 S++KV VKGL NL+SISQLCD+ V F + V N ++ L+ G R K Sbjct: 582 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMK-GSRSKDN 640 Query: 88239 YTVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKV 88060 + T CL E + +WH+R H + K+I K V G+P K +E ++ Sbjct: 641 CYLWTPQETSYSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 700 Query: 88059 CEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 C C +GK +K S + Q +++ LEL+HMDL GPM+V+S G K Y +V+VDD++R T Sbjct: 701 CGECQIGKQVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFT 759 Score = 141 bits (351), Expect(2) = 1e-065 Identities = 70/131 (53%), Positives = 90/131 (68%) Frame = -3 Query: 87872 WIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLTAS 87693 ++ Q KY K ++K+F M++A TP KL + G++V+Q LYR MIGSLLYLTAS Sbjct: 1284 FLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTAS 1343 Query: 87692 RPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVDYV 87513 RPDI ++VG CAR+Q NPK SH+ VKRIL Y+ GTSD G+ Y S+ LVGY D D+ Sbjct: 1344 RPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWA 1403 Query: 87512 GYLVDRKSTTG 87480 G + DRKST G Sbjct: 1404 GSVDDRKSTFG 1414 Score = 140 bits (349), Expect(2) = 1e-037 Identities = 81/234 (34%), Positives = 128/234 (54%), Gaps = 5/234 (2%) Frame = -2 Query: 4878 REQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLE 4699 +E ++ +R + R + + + EP++ EAL E W AM +E+ + Sbjct: 1010 KELIIGDPNRGVTTRSREIEIISNSCFVSKIEPKNVKEALTDEF---WINAMQEELEQFK 1066 Query: 4698 KNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*A----TDYAEIFSPV 4534 +N+ W L P G + KW+F+ KT +G R KA LV +G D+ E F+P Sbjct: 1067 RNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPG 1126 Query: 4533 VKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTR 4354 +L SIR+LL + L QMD K+ FL+G L++E Y++QPKGFV P V +L + Sbjct: 1127 ARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKK 1186 Query: 4353 SLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 +LYGLKQAPR WY++ F+T+ + K D + K+ + + +Y+DD++ G S Sbjct: 1187 ALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMS 1245 Score = 139 bits (346), Expect(2) = 1e-065 Identities = 67/127 (52%), Positives = 93/127 (72%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 +LG+ IS SKKQN V+LSTAEAEY+AA C+Q++W+KQ L ++ ++ + + ++CDN Sbjct: 1418 YLGTNFISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNL 1477 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAINI KN VQH RTKH+DIRHH++RD V+ I++ EEQIADIFT +L FE+ Sbjct: 1478 SAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQFEK 1537 Query: 87111 NRLELGM 87091 R +LG+ Sbjct: 1538 LRGKLGI 1544 Score = 124 bits (308), Expect = 2e-025 Identities = 69/204 (33%), Positives = 117/204 (56%), Gaps = 3/204 (1%) Frame = -1 Query: 90307 MEDFIQAEDYELWVRITKGQLIPTITDSEG---NKVPKPADTYNEADYKMLGKNAKAKCI 90137 M F+++ D W + KG P + D+EG N++ D E D LG N+KA Sbjct: 1 MVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDELALG-NSKALNA 59 Query: 90136 LVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQ 89957 L G+ + F I++CT AK W+ L+ +HEGT++V+ ++ L +++E KMK + + Sbjct: 60 LFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIH 119 Query: 89956 DMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLDELVR 89777 + + N +LG+ T E+ V K+LR P+ +++KVTAI EA+D+ NM +DEL+ Sbjct: 120 EFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIG 179 Query: 89776 NLKTYEMNVDKRGEGNKENFFGLKSTE 89696 +L+T+E+ + R E +N + + E Sbjct: 180 SLQTFELGLSDRTEKKSKNLAFVSNDE 206 Score = 70.6 bits (170), Expect(3) = 7e-020 Identities = 39/124 (31%), Positives = 65/124 (51%), Gaps = 1/124 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T QQNG VERK++ L E AR +L+ +LP W E + T Y+ NR+T +++ Sbjct: 823 TPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEI 882 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + P + + G C+ + + K +P++ IFLGY N+ Y+V + T+ + Sbjct: 883 WKGRKPTVKHFHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVM 942 Query: 65343 VSRDV 65357 S +V Sbjct: 943 ESINV 947 Score = 52.7 bits (124), Expect(3) = 7e-020 Identities = 32/101 (31%), Positives = 50/101 (48%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C C Q+ +++ T+S R +LL +DL P V + +Y ++VDDFSR T Sbjct: 701 CGECQIGKQVKMSNQKLQHQTTS-RVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFT 759 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 W + KS+T + K + + IK IR+ +G EF Sbjct: 760 WVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREF 800 Score = 45.7 bits (106), Expect(2) = 1e-037 Identities = 25/104 (24%), Positives = 54/104 (51%) Frame = -3 Query: 4151 RLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLAN 3972 ++ + FEM +G LG+++ + + + LSQ Y + ++ +F + +A + TP Sbjct: 1255 QMQSEFEMSLVGELTYFLGLQVKQMEDS--IFLSQSKYAKNIVKKFGMENASHKRTPAPT 1312 Query: 3971 HFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 H KLSK+++ +V++ + +++ L + +RPD Y Sbjct: 1313 HLKLSKDEAGTSVDQSLYRSMIGSLL-------YLTASRPDITY 1349 Score = 31.7 bits (70), Expect(2) = 1.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 63918 SNNSWIIDSGASNHMTFDKTLLINIIP 63998 + W +DSG S HMT K L+NI P Sbjct: 532 AKEDWYLDSGCSRHMTGVKEFLVNIEP 558 Score = 28.6 bits (62), Expect(2) = 1.6 Identities = 19/76 (25%), Positives = 35/76 (46%) Frame = +2 Query: 64028 NGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGP 64207 +G + K+T +G + +L+K+L V NLIS+ L V +F CL+ Sbjct: 568 DGSKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNV-NFTKSECLVTNE 626 Query: 64208 SMKSPLEIGRAHNGLY 64255 + ++ R+ + Y Sbjct: 627 KSEVLMKGSRSKDNCY 642 Score = 23.1 bits (48), Expect(3) = 7e-020 Identities = 9/28 (32%), Positives = 13/28 (46%) Frame = +2 Query: 64496 SCMSHGNSTDYLWHNRLGHVSFIKMKGI 64579 +C+ +WH R GH+ MK I Sbjct: 654 TCLFSKEDEVKIWHQRFGHLHLRGMKKI 681 >gb|AAD12998.1| (AF082134) pol polyprotein [Zea mays] Length = 998 Score = 191 bits (481), Expect(2) = 1e-065 Identities = 103/249 (41%), Positives = 150/249 (59%), Gaps = 6/249 (2%) Frame = -2 Query: 4926 EADTQPTPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLID-EGEPESFDEALQVE 4750 + +++P P+ + R+ + A + +H ID EG+P +++ A++ Sbjct: 428 QVESEPEPSLRRSQRLRKSAIPDDYEVYAAENIECDEIHMSEDIDTEGDPTTYEAAMRSA 487 Query: 4749 DSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVK 4573 +S KW AM+DE+ S+ N W L +P G + + KWV++ K G R+KA LV K Sbjct: 488 NSSKWLSAMEDELESMRMNKVWDLEVIPHGAKTVGCKWVYKTKRDSRGNIERYKARLVAK 547 Query: 4572 G*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQP 4405 G DY E FSPV S RI++ +VA ++ L QMD KT FL+G+L++ ++M QP Sbjct: 548 GFTQREGIDYHETFSPVSTKDSFRIIMALVAHFDLELHQMDVKTAFLNGELEENVFMAQP 607 Query: 4404 KGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSY 4225 KGFVV GKEHM C L RS+YGLKQA RQWY KFD + K F + ++D C Y K Y Sbjct: 608 KGFVVSGKEHMGCHLRRSIYGLKQASRQWYIKFDQTIRKFGFEENKEDNCIYAKFRKGKY 667 Query: 4224 VFLLLYLDDMLIEGS 4180 +FL+LY+DD+L+ S Sbjct: 668 IFLVLYVDDILLASS 682 Score = 166 bits (417), Expect = 3e-038 Identities = 99/297 (33%), Positives = 154/297 (51%), Gaps = 10/297 (3%) Frame = -3 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPR 5718 ++ + S LWH RLGH+S ++ LV + L L D+ C C+ GK + K + Sbjct: 31 SDGETSSKLWHYRLGHISRGRIESLVKEQILHPLDFTDLEQCRDCIKGKFAK-QIKKDAK 89 Query: 5717 EP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKA 5538 +VL ++ HTD+ GP PV ++ G ++TF D+SR ++Y +K S+ FK++KA Sbjct: 90 HSTRVL-EIIHTDICGPFPVRTVDGFNSFITFTDDYSRYGYIYPIKERSEALDKFKQFKA 148 Query: 5537 EVENQSSLKVKRLRSDNGGEY---------DKS*FTAFCAAKGIRLMRAVPGKARQNGID 5385 EVENQ LK+K +RSD GGEY F F GI + PG+ +QNG+ Sbjct: 149 EVENQHDLKIKIVRSDRGGEYYGRHTEYGQVPGPFARFLRENGIVAQYSTPGEPQQNGVA 208 Query: 5384 ERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKY 5205 ER N+ L + RSM +P W + T +++NR PS + + E+W ++ Sbjct: 209 ERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNRVPSKSVA-RTPYELWTGRKPTL 267 Query: 5204 SHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFW-DDKNRKILRHCDVTF 5028 ++ +GC + + KL+ + C+ IGY GYRF+ D+ K + F Sbjct: 268 NYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRSKGYRFYCPDRQTKFIETRHAIF 327 Query: 5027 DESVMYK 5007 E M K Sbjct: 328 LEDDMIK 334 Score = 88.2 bits (215), Expect(2) = 1e-065 Identities = 45/100 (45%), Positives = 60/100 (60%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS+ F+MKD+G A +LG++I RDR L LSQ+ YIE VL R+ ++ P+ Sbjct: 694 LSSNFDMKDMGEASYVLGIEIRRDRQKRVLGLSQKSYIENVLKRYNMHKCNASPGPIVKG 753 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 K + Q PK E+N M VPYA AI S++ VCTRPD Sbjct: 754 DKFGEYQCPKNQYEKNKMKSVPYASAIGSIMYAQVCTRPD 793 Score = 79.6 bits (193), Expect(2) = 5e-021 Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMIGSLL 87708 + Q+ Y++ +LKR+ M PI K +K Y IGS++ Sbjct: 725 LSQKSYIENVLKRYNMHKCNASPGPIVKGDKFGEYQCPKNQYEKNKMKSVPYASAIGSIM 784 Query: 87707 YL-TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y +RPD+ F+ G+ R+Q NP H +AVK+ L YL+GT L + Y + ++ +VGY Sbjct: 785 YAQVCTRPDLAFTTGMLGRYQKNPGIEHWKAVKKALRYLQGTKGLMLTYRRSNSLQIVGY 844 Query: 87530 ADVDYVGYLVDRKSTTG 87480 AD D+ G KST+G Sbjct: 845 ADADWGGCRDTLKSTSG 861 Score = 64.8 bits (155), Expect(3) = 2e-018 Identities = 39/127 (30%), Positives = 70/127 (54%), Gaps = 3/127 (2%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG ER+++ L+++ R++L S LP W E + T +++NR+ + + + +++ Sbjct: 203 QQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNRVPSKSV-ARTPYELWT 261 Query: 65172 NK*PAYSYLKVFGCLCFPTL-NSHKDKFEPRTTPHIFLGYPFNTNGYKVL--DFSTKKIH 65342 + P +Y ++GC + N + K + RTT F+GYP + GY+ D TK I Sbjct: 262 GRKPTLNYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRSKGYRFYCPDRQTKFIE 321 Query: 65343 VSRDVSFYEN 65372 +R F E+ Sbjct: 322 -TRHAIFLED 330 Score = 50.8 bits (119), Expect(2) = 5e-021 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Frame = -2 Query: 87453 IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKI-----EQVPIFCDNTS 87289 IS S KQ + A ST AE+VA Q +WIK+ + GL++ + I+CDN Sbjct: 871 ISWKSCKQTARASSTMHAEFVATYEATGQAIWIKKFVP--GLRVVDSIERPLRIYCDNEP 928 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 A+ N K++DI+ + +++ + I + + +AD T L F ++ Sbjct: 929 AVFFSHNNKSSGSAKYIDIKCYIVKEKILDHTIQVEHIRTHQMLADPLTKGLPPSVFSKH 988 Query: 87108 RLELGM 87091 +G+ Sbjct: 989 AAGMGL 994 Score = 50.0 bits (117), Expect = 0.005 Identities = 32/98 (32%), Positives = 47/98 (47%) Frame = -2 Query: 88182 EKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQM 88003 E LWH RL H S+ ++ L+ + ++ L F + + C C GK K K + Sbjct: 34 ETSSKLWHYRLGHISRGRIESLVKEQILHPLD---FTDLEQCRDCIKGKFAKQIKKDAK- 89 Query: 88002 VSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 ST LE+IH D+CGP V++ DDY+R Sbjct: 90 -HSTRVLEIIHTDICGPFPVRTVDGFNSFITFTDDYSR 126 Score = 49.2 bits (115), Expect(3) = 2e-018 Identities = 26/89 (29%), Positives = 44/89 (49%) Frame = +1 Query: 64669 KNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKS 64848 K+ S R +++ D+ P+ V T +G+ F+ DD+SR + + +S L K Sbjct: 86 KDAKHSTRVLEIIHTDICGPFPVRTVDGFNSFITFTDDYSRYGYIYPIKERSEALDKFKQ 145 Query: 64849 FVSLVGNQFRVTIKSIRTYNGLEFISHET 64935 F + V NQ + IK +R+ G E+ T Sbjct: 146 FKAEVENQHDLKIKIVRSDRGGEYYGRHT 174 Score = 27.8 bits (60), Expect(3) = 2e-018 Identities = 10/18 (55%), Positives = 13/18 (71%) Frame = +2 Query: 64505 SHGNSTDYLWHNRLGHVS 64558 S G ++ LWH RLGH+S Sbjct: 31 SDGETSSKLWHYRLGHIS 48 >gb|AAD12997.1| (AF082133) gag-pol polyprotein [Zea mays] Length = 1406 Score = 188 bits (473), Expect(2) = 1e-064 Identities = 111/242 (45%), Positives = 151/242 (61%), Gaps = 17/242 (7%) Frame = -2 Query: 4905 PTEESEEVTREQVLRRSSRTIRA--PDRYS---------HSLHYLLLID-EGEPESFDEA 4762 P ESE T LRRS R ++ PD Y +H ID EG+P +++ A Sbjct: 835 PQVESEPETS---LRRSQRLRKSAIPDDYEVYAAENIECDEIHMSEDIDTEGDPTTYEAA 891 Query: 4761 LQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAH 4585 ++ +S KW AM+DE+ S+ N W L +P G + + KWV++ K G R+KA Sbjct: 892 MRSANSSKWLSAMEDELESMRMNKVWDLEVIPHGAKTVGCKWVYKTKRDSRGNIERYKAR 951 Query: 4584 LVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIY 4417 LV KG DY E FSPV S RI++ +VA ++ L QM KT FL+G+L++ ++ Sbjct: 952 LVAKGFTQREGIDYHETFSPVSTKDSFRIIMALVAHFDLELHQMGVKTAFLNGELEENVF 1011 Query: 4416 MQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKY 4237 M QPKGFVV GKEHM C L RS+YGLKQA RQWY KFD + K F + ++D C Y K Sbjct: 1012 MAQPKGFVVSGKEHMGCHLRRSIYGLKQASRQWYIKFDQTIRKFGFEENKEDNCIYAKFR 1071 Query: 4236 TNSYVFLLLYLDDMLIEGS 4180 Y+FL+LY+DD+L+ S Sbjct: 1072 KGKYIFLVLYVDDILLASS 1090 Score = 183 bits (460), Expect = 3e-043 Identities = 129/419 (30%), Positives = 205/419 (48%), Gaps = 30/419 (7%) Frame = -3 Query: 6263 NHGFWI----LVHLSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQ 6096 ++ +WI VH+++S + G + +A+ +E GD+ +K Sbjct: 298 SYSWWIDSSATVHVANSLQGLRTSQRLPKGR-RTIRVANGVEAAVEAIGDIHLKLVNGFV 356 Query: 6095 RTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGC 5916 L DV Y+P +++NLISV + D FG I V LY Sbjct: 357 LLLRDVLYVPSLRRNLISVSRLDDQHIHCHFGDRQCVIQFDNKDVGLAIRRDMLYLLSQS 416 Query: 5915 INMDVV----------------AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFD 5784 ++V+ ++ + S LWH RLGH+S ++ LV + L L D Sbjct: 417 DVVNVLDIPENDPASSGRKRKRSDGETSSKLWHYRLGHISRGRIESLVKEQILHPLDFTD 476 Query: 5783 MGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSR 5604 + C C+ GK + K + +VL ++ HTD+ GP PV ++ G ++TF D+SR Sbjct: 477 LEQCRGCIKGKFAK-QIKKDAKHSTRVL-EIIHTDICGPFPVRTVDGFNSFITFTDDYSR 534 Query: 5603 KVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEY---------DKS*FTAF 5451 ++Y +K S+ FK++KAEVENQ LK+K +RSD GGEY F F Sbjct: 535 YGYIYPIKERSEALDKFKQFKAEVENQHDLKIKIVRSDRGGEYYGRHTEYGQVPGPFARF 594 Query: 5450 CAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINR 5271 GI + PG+ +QNG+ ER N+ L + RSM +P W + T +++NR Sbjct: 595 LRENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNR 654 Query: 5270 GPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNL 5091 PS + + E+WI ++ ++ +GC + + KL+ + C+ IGY Sbjct: 655 VPSKSVA-RTPYELWIGRKPTLNYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRS 713 Query: 5090 FGYRFW-DDKNRKILRHCDVTFDESVMYK 5007 GYRF+ D+ K + F E M K Sbjct: 714 KGYRFYCPDRQTKFIETRHAIFLEDDMIK 742 Score = 88.2 bits (215), Expect(2) = 1e-064 Identities = 45/100 (45%), Positives = 60/100 (60%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS+ F+MKD+G A +LG++I RDR L LSQ+ YIE VL R+ ++ P+ Sbjct: 1102 LSSNFDMKDMGEASYVLGIEIHRDRQKGVLGLSQKSYIENVLKRYNMHKCNASPGPIVKG 1161 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 K + Q PK E+N M VPYA AI S++ VCTRPD Sbjct: 1162 DKFGEYQCPKNQYEKNKMKSVPYASAIGSIMYAQVCTRPD 1201 Score = 79.6 bits (193), Expect(2) = 5e-021 Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL------YRGMIGSLL 87708 + Q+ Y++ +LKR+ M PI K +K Y IGS++ Sbjct: 1133 LSQKSYIENVLKRYNMHKCNASPGPIVKGDKFGEYQCPKNQYEKNKMKSVPYASAIGSIM 1192 Query: 87707 YL-TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 Y +RPD+ F+ G+ R+Q NP H +AVK+ L YL+GT L + Y + ++ +VGY Sbjct: 1193 YAQVCTRPDLAFTTGMLGRYQKNPGIEHWKAVKKALRYLQGTKGLMLTYRRSNSLQIVGY 1252 Query: 87530 ADVDYVGYLVDRKSTTG 87480 AD D+ G KST+G Sbjct: 1253 ADADWGGCRDTLKSTSG 1269 Score = 65.2 bits (156), Expect(3) = 7e-019 Identities = 39/127 (30%), Positives = 70/127 (54%), Gaps = 3/127 (2%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG ER+++ L+++ R++L S LP W E + T +++NR+ + + + +++ Sbjct: 611 QQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNRVPSKSV-ARTPYELWI 669 Query: 65172 NK*PAYSYLKVFGCLCFPTL-NSHKDKFEPRTTPHIFLGYPFNTNGYKVL--DFSTKKIH 65342 + P +Y ++GC + N + K + RTT F+GYP + GY+ D TK I Sbjct: 670 GRKPTLNYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRSKGYRFYCPDRQTKFIE 729 Query: 65343 VSRDVSFYEN 65372 +R F E+ Sbjct: 730 -TRHAIFLED 738 Score = 59.7 bits (142), Expect = 6e-006 Identities = 53/168 (31%), Positives = 81/168 (47%), Gaps = 16/168 (9%) Frame = -2 Query: 88392 VYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 V YV L NL+S+S+L D+ F VI + + + L +RD +Y + S + Sbjct: 362 VLYVPSLRRNLISVSRLDDQHIHCHFGDRQC-VIQFDNKDVGLAIRRDM-LYLLSQSDVV 419 Query: 88212 DKKLVCLSVLEKDPL----------------LWHKRLRHASQVQLNKLITKDLVIGLPKN 88081 + L + E DP LWH RL H S+ ++ L+ + ++ L Sbjct: 420 N----VLDIPENDPASSGRKRKRSDGETSSKLWHYRLGHISRGRIESLVKEQILHPLD-- 473 Query: 88080 KFKEDKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVD 87901 F + + C C GK K K + ST LE+IH D+CGP V++ D Sbjct: 474 -FTDLEQCRGCIKGKFAKQIKKDAK--HSTRVLEIIHTDICGPFPVRTVDGFNSFITFTD 530 Query: 87900 DYTR 87889 DY+R Sbjct: 531 DYSR 534 Score = 50.8 bits (119), Expect(2) = 5e-021 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Frame = -2 Query: 87453 IS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKI-----EQVPIFCDNTS 87289 IS S KQ + A ST AE+VA Q +WIK+ + GL++ + I+CDN Sbjct: 1279 ISWKSCKQTARASSTMHAEFVATYEATGQAIWIKKFVP--GLRVVDSIERPLRIYCDNEP 1336 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 A+ N K++DI+ + +++ + I + + +AD T L F ++ Sbjct: 1337 AVFFSHNNKSSGSAKYIDIKCYIVKEKILDHTIQVEHIRTHQMLADPLTKGLPPSVFSKH 1396 Query: 87108 RLELGM 87091 +G+ Sbjct: 1397 AAGMGL 1402 Score = 49.2 bits (115), Expect(3) = 7e-019 Identities = 26/89 (29%), Positives = 44/89 (49%) Frame = +1 Query: 64669 KNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKS 64848 K+ S R +++ D+ P+ V T +G+ F+ DD+SR + + +S L K Sbjct: 494 KDAKHSTRVLEIIHTDICGPFPVRTVDGFNSFITFTDDYSRYGYIYPIKERSEALDKFKQ 553 Query: 64849 FVSLVGNQFRVTIKSIRTYNGLEFISHET 64935 F + V NQ + IK +R+ G E+ T Sbjct: 554 FKAEVENQHDLKIKIVRSDRGGEYYGRHT 582 Score = 28.6 bits (62), Expect(3) = 7e-019 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 64406 SCNSLSDVAILPCNERSSTGMNLNFYNPLMSCMSHGNSTDYLWHNRLGHVS 64558 S + + +V +P N+ +S+G S G ++ LWH RLGH+S Sbjct: 414 SQSDVVNVLDIPENDPASSGRKRK--------RSDGETSSKLWHYRLGHIS 456 >gb|AAF36671.1|AF222049_2 (AF222049) pol protein [Drosophila melanogaster] Length = 1037 Score = 180 bits (451), Expect(2) = 3e-064 Identities = 99/262 (37%), Positives = 149/262 (56%), Gaps = 5/262 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKK-----DESFRMCI 56584 PI Y+ E+ Q+ E+L +G IR S +P+ + + V+KK + +R+ + Sbjct: 132 PIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVV 191 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 +YR+LNK T+++++ IP ID+ FD + +FS +DL G+ Q+++ +V KTAF T Sbjct: 192 DYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTS 251 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GHYEFL FGL+NAP+ F LMN I PY F IV++DDILI+SK+ Sbjct: 252 GHYEFLRMPFGLRNAPSTFQRLMNNILSPYTGQFCIVYMDDILIFSKNIGEHVNHLSCIF 311 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 NL + KCEF + FLGH ++ +G+ KI+A+ PTN + SF+ Sbjct: 312 SCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFL 371 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTKQN 57205 G+ Y RR+I +S IA L K+N Sbjct: 372 GITGYLRRYIKDYSKIAQPLIKYLKKN 398 Score = 140 bits (350), Expect(2) = 1e-032 Identities = 85/243 (34%), Positives = 131/243 (52%), Gaps = 10/243 (4%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L + L L + KCEF + + F GH ++ EG++ KI+AIC + P Sbjct: 302 EHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLP 361 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSA----------THLNLQDVSFMWLVKCDMSFLKL 38993 T+ ++ SF+G+ Y RR+++ +S A + +N D ++ +F KL Sbjct: 362 TNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNSKINTHDQXYV------EAFQKL 415 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K LITS PI+ FTI DAS + VLM+ I Y SR LK HELNY T + Sbjct: 416 KILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVISYASRSLKNHELNYSTIEK 475 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL I ++ +++Y+YG ++ TDH L + ++ N + RW L ++D I + Sbjct: 476 ELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLKLQRWKVQLNEFDFDITFI 535 Query: 38632 PGKKNMVAYSLSR 38594 GK+N +A LSR Sbjct: 536 KGKENALADGLSR 548 Score = 98.3 bits (241), Expect(3) = 2e-043 Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 4/205 (1%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 ++ E + KKI+ I P + QI SFLG+ GY RR + Y Sbjct: 340 INSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNS 399 Query: 68555 SCGLTSVRLVFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVLMQKGKVVAY 68722 V +L +L+ P + ++ + DAS LG VLMQ KV++Y Sbjct: 400 KINTHDQXYVEAFQKLK-ILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVISY 458 Query: 68723 ASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRK 68902 ASR LK HE Y + EL+ + ++ K + Y+YG F + T+HR L ++ N ++ L+ Sbjct: 459 ASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLKL 518 Query: 68903 RIWLELLKDYDMTILYHPGKTNVVADALS 68989 + W L ++D I + GK N +AD LS Sbjct: 519 QRWKVQLNEFDFDITFIKGKENALADGLS 547 Score = 95.6 bits (234), Expect(2) = 3e-064 Identities = 51/117 (43%), Positives = 72/117 (60%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D S LGAVLM + VI+YASR LK HE NY T + +L A+ ++ K +++Y+YG Sbjct: 434 FTIVTDASNYALGAVLMQDNKVISYASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYG 493 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKV 57657 K + TDHR L ++ K+ NL+ +RW L + D I + GK N +AD LSR V Sbjct: 494 RKFIIKTDHRPLVWLNNLKEPNLKLQRWKVQLNEFDFDITFIKGKENALADGLSRIV 550 Score = 70.6 bits (170), Expect(3) = 2e-043 Identities = 39/108 (36%), Positives = 52/108 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C FS +DL ++Q+++ +D+ KTAF T GHYEFL M F L NA +TF LMN Sbjct: 220 CKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMNNILS 279 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 Y EH +HL +F L + L + KCE Sbjct: 280 PYTGQFCIVYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCE 327 Score = 57.8 bits (137), Expect(3) = 2e-043 Identities = 35/112 (31%), Positives = 64/112 (56%), Gaps = 5/112 (4%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ +F +F + D+ S+I I + PI+ Y+ E+ Q+ ++L++ Sbjct: 100 LIQKFEHIFYKEGQDLSFTSEIKHRI-ITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQ 158 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMH-----MCIDYRQLNKITIIN*YPIPRIDDLFD 68029 IR S S + +PL V++K + + + +DYR+LNK TI + +PIP ID++FD Sbjct: 159 GIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFD 215 Score = 29.0 bits (63), Expect(2) = 1e-032 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 APS F LM + F I++MDDIL+ Sbjct: 266 APSTFQRLMNNILSPYTGQFCIVYMDDILI 295 >emb|CAA25702.1| (X01472) ORF 2, pot. reverse transcriptase [Drosophila melanogaster] Length = 1058 Score = 180 bits (452), Expect(2) = 3e-063 Identities = 95/257 (36%), Positives = 154/257 (58%), Gaps = 5/257 (1%) Frame = +2 Query: 56438 YRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDES-----FRMCIEYRQLN 56602 Y A +E+++Q+Q++L +G IR S +P+ + + V KK ++ FR+ I+YR+LN Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 ++T+ +++ IP +D+ + F+ IDL G+ Q+++ +V KTAF T+ GHYE+L Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 FGLKNAPA F MN I +P L +V++DDI+++S S Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL + KCEF +FLGHV++ DG+ + KIEA++ + PT ++ +F+GL YY Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452 Query: 57143 RRFI*VFSSIALQLTNLTKQNV 57208 R+FI F+ IA +T K+N+ Sbjct: 453 RKFIPNFADIAKPMTKCLKKNM 474 Score = 159 bits (397), Expect = 8e-036 Identities = 107/291 (36%), Positives = 154/291 (52%), Gaps = 8/291 (2%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE+L M GL P ++ C L LL+ + Y ++ S EH L + Sbjct: 329 YEYLRMPFGLKNA-PATF---QRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGL 384 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 V + L L + KCEF + F GHV++ +GI+ +P KIEAI + PT E+ + Sbjct: 385 VFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKA 444 Query: 39118 FVGLVSYYRRFVEGFSTSATHLNLQDVSFMWL----VKCDMSFLKLKELITSAPILTLLV 38951 F+GL YYR+F+ F+ A + M + + D +F KLK LI+ PIL + Sbjct: 445 FLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPD 504 Query: 38950 EGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRH 38771 FT+ DAS V + VL + G + Y+SR L HE+NY T + EL IV+A +RH Sbjct: 505 FTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRH 564 Query: 38770 YLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSR 38594 YL G +E +DH L + +D NS+ RW L ++D I Y GK+N VA +LSR Sbjct: 565 YLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623 Score = 103 bits (254), Expect(3) = 7e-044 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 3/206 (1%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +++ + I +P+KIE I+ + P +I +FLGL GYYR+ + ++ Sbjct: 414 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 473 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLE---F*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAY 68722 + T+ +L L+ E + ++ L DAS + LG VL Q G ++Y Sbjct: 474 MKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSY 533 Query: 68723 ASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRK 68902 SR L HE Y + EL+ +V+A K + +YL G HF + ++H+ L +++ +D + Sbjct: 534 ISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKL 593 Query: 68903 RIWLELLKDYDMTILYHPGKTNVVADALS 68989 W L ++D I Y GK N VADALS Sbjct: 594 TRWRVKLSEFDFDIKYIKGKENCVADALS 622 Score = 91.7 bits (224), Expect(2) = 3e-063 Identities = 50/115 (43%), Positives = 68/115 (58%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D S LGAVL + + ++Y SR L HE NY T + +L A+V+A K +RHYL G Sbjct: 509 FTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLG 568 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 E+ +DH+ L +++ KD N + RW L + D I Y GK N VADALSR Sbjct: 569 RHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623 Score = 69.9 bits (168), Expect(3) = 7e-044 Identities = 40/108 (37%), Positives = 52/108 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ IDL +HQ+++ E +SKTAF T++GHYE+L M F L NA ATF MN R Sbjct: 295 CNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILR 354 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 +EH L VF L + L + KCE Sbjct: 355 PLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402 Score = 54.7 bits (129), Expect(3) = 7e-044 Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 5/71 (7%) Frame = +2 Query: 67811 YRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKD-----EYMHMCIDYRQLN 67975 Y A +E++ Q+QD+LN+ IRTS S + +P+ V +K + + IDYR+LN Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272 Query: 67976 KITIIN*YPIPRIDDL 68023 +IT+ + +PIP +D++ Sbjct: 273 EITVGDRHPIPNMDEI 288 >dbj|BAB01972.1| (AP002064) copia-like retrotransposable element [Arabidopsis thaliana] Length = 1499 Score = 249 bits (630), Expect = 4e-063 Identities = 157/437 (35%), Positives = 225/437 (50%), Gaps = 8/437 (1%) Frame = -3 Query: 6305 TLGML*FLV*TALLNHGFWILVHLSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGD 6126 T+G +LV + NH + H SK++ + GN GKV EGKGD Sbjct: 318 TIGEETWLVDSGCTNHMSKDVRHFIALDRSKKII--IRIGNGGKVVS--------EGKGD 367 Query: 6125 VCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKI--VKG---VIVV 5961 + + T + + DV Y+P + +NL+SV Q S GY +F I +KG + + Sbjct: 368 IRVSTN-KGDHVIKDVLYVPELARNLLSVSQMISNGYRVIFEDNKCVIQDLKGRKILDIK 426 Query: 5960 ARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM 5781 + + ++ E + LWH R GH++ ++ + +E L F++ Sbjct: 427 MKDRSFPIIWKKSREETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEV 486 Query: 5780 --GLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFS 5607 G+C +C MGKQ R SF K + L++ H+DV GP S+ GSR+++TFI DFS Sbjct: 487 IKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFS 546 Query: 5606 RKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRL 5427 R WVYFLK+ S+V FK +K VENQS ++KRLR+D GGE+ F C GI Sbjct: 547 RMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHH 606 Query: 5426 MRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGF 5247 P +QNG+ ER N+ L E ARSM + FWA ++T YL NR PS L Sbjct: 607 EITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEK 666 Query: 5246 KILE-EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWD 5070 + E+W K+ HL+ FGC Y+H+ EKR KL+ KA + +GY + GYR + Sbjct: 667 GVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFL 726 Query: 5069 DKNRKILRHCDVTFDESVMYKDKEQ 4995 KI DVTFDE + E+ Sbjct: 727 LNEEKIEVSKDVTFDEKKTWSHDEK 751 Score = 170 bits (426), Expect(2) = 3e-049 Identities = 87/216 (40%), Positives = 137/216 (63%), Gaps = 5/216 (2%) Frame = -2 Query: 4815 LHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKW 4636 +H + L+ EP++ +EA++ E KW AM +E+R +EKN TW + P K + KW Sbjct: 830 IHEMCLMMAEEPQALEEAMKDE---KWIEAMREELRMIEKNKTWEVVARPKDKNVISVKW 886 Query: 4635 VFRIKT*PDGKR-RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLE 4471 +FR+KT G+ + KA LV +G DY E F+PV + +IR ++ I A + L Sbjct: 887 IFRLKTDASGEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLF 946 Query: 4470 QMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMT 4291 QMD K+ FL+GDL++E+Y++QP GF+ +E V KL ++LYGLKQAPR WY + D + Sbjct: 947 QMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFI 1006 Query: 4290 KSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRE 4168 K+ F ++ D Y KK + + + LY+DD+++ GS+++E Sbjct: 1007 KNGFERSINDAAFYVKKTSKEILVVSLYVDDIIVTGSNVKE 1047 Score = 113 bits (280), Expect(2) = 3e-049 Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 2/132 (1%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 +GS S KQ +VA STAEAEY+A Q +W+++ +++ G K E+ + IFCDN Sbjct: 1218 IGSGAFCWNSSKQKTVAQSTAEAEYIAVCSAANQAIWLQRLVNEIGFKAEKGIRIFCDNK 1277 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI I KN VQH+RTKH+DI++HF+R+ + G+I + +C E QIADI T L R Sbjct: 1278 SAIAIGKNPVQHRRTKHIDIKYHFVREAQQNGKIKLEYCPGELQIADILTKPLNTTRRRR 1337 Query: 87111 NRLE-LGMMKINYE 87073 +R E L M+ E Sbjct: 1338 HRAEQLNQMEAQLE 1351 Score = 111 bits (276), Expect(2) = 3e-049 Identities = 53/133 (39%), Positives = 87/133 (64%), Gaps = 1/133 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQ-KLYRGMIGSLLYL 87702 G ++ Q+ Y K+LLK+F M + K + TP+ P K++ E + +E +YR MIG +LYL Sbjct: 1081 GIFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIE-EVLSEKLEDVTMYRSMIGGMLYL 1139 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 ASRPDI+++ +R+ +P + H+Q KR+L Y+KGT G+ + + +LVG++D Sbjct: 1140 CASRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLTYGIHFKRVEKPELVGFSDS 1199 Query: 87521 DYVGYLVDRKSTTG 87480 D+ G + D+KST+G Sbjct: 1200 DWAGSVEDKKSTSG 1213 Score = 103 bits (254), Expect = 4e-019 Identities = 63/228 (27%), Positives = 108/228 (46%), Gaps = 3/228 (1%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXX---XGRSDEHSID 88396 ++ W +DS C+ HM+ + F++L+ +H I Sbjct: 321 EETWLVDSGCTNHMSKDVRHFIALDRSKKIIIRIGNGGKVVSEGKGDIRVSTNKGDHVIK 380 Query: 88395 KVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTI 88216 V YV L NLLS+SQ+ +VIF + +L +K++ I +D+ + + Sbjct: 381 DVLYVPELARNLLSVSQMISNGYRVIFEDNKCVIQDLKGRKILDIKMKDRS-FPIIWKKS 439 Query: 88215 YDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK 88036 ++ + E+ LWHKR H + ++ + T +V LPK + + +C AC +GK Sbjct: 440 REETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKG-ICAACEMGK 498 Query: 88035 *IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT 87883 + SF K ++ +LELIH D+CGPM+ +S Y +DD++R T Sbjct: 499 QSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMT 549 Score = 94.8 bits (232), Expect(2) = 9e-032 Identities = 49/129 (37%), Positives = 81/129 (61%), Gaps = 2/129 (1%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRL-TNSVLHNKNHF 65159 ++ QQNG ER+++ L+E+AR+++ + KL ++W E I T+TYL NRL + S+ Sbjct: 612 YSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPM 671 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++ K P+ +LKVFGC+C+ + K K + + IF+GY + GY+V + +K Sbjct: 672 EIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEK 731 Query: 65337 IHVSRDVSFYE 65369 I VS+DV+F E Sbjct: 732 IEVSKDVTFDE 742 Score = 94.4 bits (231), Expect(2) = 9e-018 Identities = 59/211 (27%), Positives = 105/211 (48%) Frame = -1 Query: 90346 LFNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKM 90167 +FNG+ Y +WK +M ++ +LW I G S + PA T D M Sbjct: 11 IFNGESYGFWKIKMITILKTR--KLWDVIENG------VTSNSSPETSPALTRERDDQVM 62 Query: 90166 LGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEA 89987 K+ A IL + F RI+ +SA + W+ L+ +G++QV+ + +L EYE Sbjct: 63 --KDMMALQILQSAVSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYEN 120 Query: 89986 FKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDL 89807 KM+ G+++ D T+ + N+L G+ + + V K+L P+ ++ V + + KDL Sbjct: 121 LKMEEGETINDFTTKLINLSNQLRVHGEEKSDYQVVQKILISVPQQFDSIVGVLEQTKDL 180 Query: 89806 TNMTLDELVRNLKTYEMNVDKRGEGNKENFF 89714 + +++ EL+ LK +E ++ R + E F Sbjct: 181 STLSVTELIGTLKAHERRLNLREDRINEGAF 211 Score = 71.8 bits (173), Expect(2) = 9e-032 Identities = 40/108 (37%), Positives = 56/108 (51%) Frame = +1 Query: 64609 KTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFS 64788 K C C G+ + FP K+ +++N+ +L+ D+ P + NG +YFL +DDFS Sbjct: 488 KGICAAC-EMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFS 546 Query: 64789 RSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHE 64932 R TW L KS + K F V NQ IK +RT G EF+S E Sbjct: 547 RMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSRE 594 Score = 54.7 bits (129), Expect(2) = 3e-049 Identities = 32/99 (32%), Positives = 54/99 (54%) Frame = -3 Query: 4136 FEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLS 3957 FEM DLG LGM++++D + LSQE Y +K+L +F + + K +TPL H K+ Sbjct: 1059 FEMTDLGELSYFLGMEVNQDDEG--IFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIE 1116 Query: 3956 KEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 + S K + + +++ L +C+ +RPD +Y Sbjct: 1117 EVLSEKLEDVTMYRSMIGGMLYLCA-------SRPDIMY 1148 Score = 25.1 bits (53), Expect(2) = 9e-018 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 5/28 (17%) Frame = -2 Query: 89595 KEKNPERSQNGG-----CFKCGKTDHQIKDCPM 89512 ++K+ SQ GG C+ C K H +DC + Sbjct: 251 RKKSESISQRGGSYERRCYVCDKQGHIARDCKL 283 >gb|AAD25146.1|AC006420_1 (AC006420) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 899 Score = 249 bits (628), Expect = 6e-063 Identities = 151/350 (43%), Positives = 205/350 (58%), Gaps = 8/350 (2%) Frame = -1 Query: 39100 YYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCD 38921 + R +E L SF W C+ SFL+LK ++T+AP+L L EG +T+Y D Sbjct: 352 HLRAVLERLREHELFAKLSKCSF-WQRSCEKSFLELKAMLTNAPVLVLPEEGEPYTVYTD 410 Query: 38920 ASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETY 38741 AS VG+ VLM++G I Y SR+L HE NYPT DLE+A +VFAL IWR YLYG + + Y Sbjct: 411 ASIVGLGCVLMQKGSVIAYASRQLWKHEKNYPTHDLEMAAVVFALKIWRSYLYGAKVQIY 470 Query: 38740 TDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSY 38561 TDH SL+ I IQ +LN R RW+EL+ DYDL I YHPGK N VA +LSR++ S Sbjct: 471 TDHKSLKYIFIQPELNLRQRRWMELVADYDLDIAYHPGKANQVADALSRRR-------SE 523 Query: 38560 VCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV----QSSLYDRNRGWQFED*ALLSL 38393 V ER +D+ N M L + + +G+ Q+ L R R L Sbjct: 524 VEAERS-QVDL---VNMMGTLHVNALSKEVESLGLGAADQADLLSRIR--------LAQE 571 Query: 38392 RDQVLAG----DGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKM 38225 RD+ + G + + +G + +GR+ VP + IL EAH+ ++SIH G+ KM Sbjct: 572 RDEEIKGWALNNKTEYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKM 631 Query: 38224 YRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDF 38051 YRDL+++Y W GM+ D+A +V++C Q VK EH G + L I EWKWD ITMDF Sbjct: 632 YRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDF 689 Score = 186 bits (468), Expect = 4e-044 Identities = 113/284 (39%), Positives = 163/284 (56%), Gaps = 10/284 (3%) Frame = +2 Query: 68642 ERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 E +Y DAS +GLGCVLMQKG V+AYASRQL HEK Y HDLE+ VVFALKIW +YL Sbjct: 403 EPYTVYTDASIVGLGCVLMQKGSVIAYASRQLWKHEKNYPTHDLEMAAVVFALKIWRSYL 462 Query: 68822 YGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV 69001 YG ++T+H+SL+YIF Q +L LR+R W+EL+ DYD+ I YHPGK N VADALS + Sbjct: 463 YGAKVQIYTDHKSLKYIFIQPELNLRQRRWMELVADYDLDIAYHPGKANQVADALSRRRS 522 Query: 69002 S----------MGSLAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRF 69151 + + L V+ L+K+V+ L + + + L+ R+ Sbjct: 523 EVEAERSQVDLVNMMGTLHVN--ALSKEVESLG------LGAADQADLLSRIR------- 567 Query: 69152 WSQQFDDGDLCKIRDKVLKREAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VT 69331 +Q+ D+ +I+ L + + + G + + G +CVP + R + Sbjct: 568 LAQERDE----EIKGWALNNKTEYQ-TSNNGTIVVNGRVCVPNDRALKEEILREAHQSKF 622 Query: 69332 LFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 G +Y DLK++Y MK+D+ +V++C CQ VK EHQ P G+ +P Sbjct: 623 SIHPGSNKMYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLP 676 Score = 163 bits (409), Expect(2) = 1e-059 Identities = 93/180 (51%), Positives = 119/180 (65%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GLG VLM + +VI YASRQL HE NYPTHDL++AAVVFALK WR YLYG Sbjct: 405 YTVYTDASIVGLGCVLMQKGSVIAYASRQLWKHEKNYPTHDLEMAAVVFALKIWRSYLYG 464 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K ++YTDH+SL Y+F Q +LNLR+RRWMEL+ D D+ I YH GKAN VADALSR+ Sbjct: 465 AKVQIYTDHKSLKYIFIQPELNLRQRRWMELVADYDLDIAYHPGKANQVADALSRR---- 520 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 S ++ S+ L + TL + + EV E G A +A L +I+ Q DE+++ Sbjct: 521 RSEVEAERSQVDLVNMMGTLHVNALSKEV-ESLGLGAADQA--DLLSRIRLAQERDEEIK 577 Score = 96.3 bits (236), Expect(2) = 1e-059 Identities = 43/87 (49%), Positives = 58/87 (66%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVCVP L IL EAH S++SIHPG+ KMY DLK+++ W M+ D+ +V Sbjct: 593 GTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWV 652 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A+CP CQ VK EHQ P G L+ +P E Sbjct: 653 AKCPTCQLVKAEHQVPSGLLQNLPIPE 679 Score = 96.0 bits (235), Expect = 8e-017 Identities = 47/89 (52%), Positives = 59/89 (65%) Frame = +2 Query: 56729 TNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKS 56908 T+V KTAF TR GH+EF+V FGL NAPAAFM +MNG+F+ +L+ FVI+FIDDIL+YSKS Sbjct: 286 TDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVYSKS 345 Query: 56909 RKXXXXXXXXXXXXXXXKNLYAKFFKCEF 56995 + L+AK KC F Sbjct: 346 WEAHQEHLRAVLERLREHELFAKLSKCSF 374 Score = 82.7 bits (201), Expect = 7e-013 Identities = 41/93 (44%), Positives = 51/93 (54%) Frame = +1 Query: 68092 LREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXXXXXXX 68271 L D+ KTAF+TRYGH+EF+VM F LTNA A FM +MN FR + Sbjct: 283 LEPTDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVY 342 Query: 68272 XCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIW 68370 E H+ HLR V L+E +L+ K SKC W Sbjct: 343 SKSWEAHQEHLRAVLERLREHELFAKLSKCSFW 375 Score = 81.9 bits (199), Expect(2) = 2e-030 Identities = 46/109 (42%), Positives = 60/109 (54%) Frame = -1 Query: 37834 FQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIF 37655 FQ LGTRV+LS A+HPQTD QSE TIQ LEDML CVL++GG Sbjct: 691 FQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGG----------------- 733 Query: 37654 HSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 N + L +ALYGR CR+ + W + R G ++ E+++ KI Sbjct: 734 --NWEKYLTLALYGRACRTPLCWTPVGERRLFGPTIVDETTERMKFLKI 780 Score = 80.0 bits (194), Expect(2) = 2e-030 Identities = 41/93 (44%), Positives = 56/93 (60%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ R +SYA+ RR L F V D ++L KG RF KLSPRY+GP++++ Sbjct: 781 KLKEAHDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIER 840 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDE 37230 G VAY+LDLPP +A H VF VS R + D+ Sbjct: 841 VGAVAYKLDLPPKLNAFHNVFHVSQLRKCLSDQ 873 Score = 71.8 bits (173), Expect = 1e-009 Identities = 32/52 (61%), Positives = 41/52 (78%) Frame = +1 Query: 69745 SMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPL 69900 + K LGTRV+LST +HPQTD QSE IQ LEDML ACV+D+G +W+++L L Sbjct: 690 AFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLTL 741 Score = 46.9 bits (109), Expect(2) = 2e-008 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKS 39230 +Y SW H+ +LR VL+ LR+ L+AK SKC FW +S Sbjct: 341 VYSKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRS 378 Score = 41.0 bits (94), Expect(2) = 2e-008 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ +M +FR LD FVIIF+DDILV Sbjct: 307 FGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILV 341 >gb|AAB18084.1| (U73857) ORF_o136 [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAC77228.1| (AE000498) IS2 hypothetical protein [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAC74485.1| (AE000237) IS2 hypothetical protein [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAC73463.1| (AE000143) IS2 hypothetical protein [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAA97168.1| (U14003) IS2 ORF; alternate gene name yi21 [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAA83043.1| (U28375) ORF_f136 [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >gb|AAA69212.1| (U28377) ORF_o136; orf1 of V00279 [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA97891.1| (AP001918) 100 pct identical to pir:S56497[IS2 hypothetical 13kD protein] [Plasmid F] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA16036.1| (D90852) ORF_ID:o250#9~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA16013.1| (D90851) ORF_ID:o373#12~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA16005.1| (D90850) ORF_ID:o373#12~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA15822.1| (D90838) ORF_ID:o348#5~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA15019.1| (D90779) ORF_ID:o267#10~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA15013.1| (D90778) ORF_ID:o267#10~similar to [PIR Accession Number S56497] [Escherichia coli] Length = 136 Score = 245 bits (620), Expect = 5e-062 Identities = 124/124 (100%), Positives = 124/124 (100%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >dbj|BAA96887.1| (AB018112) copia-like retroelement pol polyprotein [Arabidopsis thaliana] Length = 1140 Score = 245 bits (619), Expect = 7e-062 Identities = 186/612 (30%), Positives = 295/612 (47%), Gaps = 38/612 (6%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M + ++ ++++F IV++L S+DI +E++A+++++SLP ++D + + Sbjct: 135 YSFRMMTSKTIDQNVDDFLRIVAELGSLDIKVAEEVQAILILNSLPVTYDQLKHTLKY-- 192 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENLR 6432 G++ L ++DVV S +RE+ + + VN + +G+ +QN N Sbjct: 193 GNKTLS---VKDVVSSSKSLEREMAELKENTKVVNTTLYTAERGRPQTRNQNGSQGNNQG 249 Query: 6431 TDQT*LV*IVEKNDTFGRAIQSQ---------------------RRNRIKNLEMTMIL*I 6315 +Q KN G++ + R+ + +N E I Sbjct: 250 NNQG-------KNQGKGKSRSNSKSRVTCWFCKKEGHVKKDCFARKKKFENEEQGEAGVI 302 Query: 6314 QQRTLGML*FLV*TALLNHGF-----WILVH--LSHSSPSKELFKNFKYGNFGKVYLADN 6156 ++ + AL H W++ H + + F +F + L D+ Sbjct: 303 TEKLVYS------EALSMHDQEAKEKWVIDSGCTYHITSRMDWFTDFNENESTLILLGDD 356 Query: 6155 KALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVK 5976 +E G G V I T R L +VR++ +++NLIS G D G+ G G + K Sbjct: 357 HTVESRGSGIVKINTHGGTIRMLKNVRFVLNLRRNLISTGTLDKLGFKHEGGDGKIRFYK 416 Query: 5975 GVIVVARGTNSGTLYTTLG--CINMDVVAE-SVSGSCLWHNRLGHMSAKGMKMLVAKGAL 5805 RG LY G +N AE S + LWH RLGHMS MK+L KG L Sbjct: 417 ENKTALRGNLVNGLYVLDGHTVLNESCNAEGSTKRTSLWHCRLGHMSVNNMKILTEKGYL 476 Query: 5804 EGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWG-PSPVSSLGGSRFYV 5628 H D+WG P+ SL G ++++ Sbjct: 477 ---------------------------------------HADLWGSPNVTPSLSGKQYFL 497 Query: 5627 TFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFC 5448 + I D +RKVW+ FLK + F F +WK VENQ + K+K LR+DNG E+ F +C Sbjct: 498 SIIDDKTRKVWLMFLKTKDETFDKFCEWKELVENQVNKKIKVLRTDNGLEFCNLKFDEYC 557 Query: 5447 AAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRG 5268 GI R +QNG+ ERMN+ L E R + G+ ++FWA ST AYL+NR Sbjct: 558 KKNGIERHRTCTYTPQQNGVAERMNRTLMEKVRCLLNESGLDESFWAEAASTTAYLVNRS 617 Query: 5267 PSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLF 5088 P+ + + EE+W+ K+ Y HLR FG YVH D + KL +A+K +GY + Sbjct: 618 PASVVDHNVPEELWLGKKPGYKHLRRFGSIAYVHQD---QGKLKPRALKGVFLGYPQGVK 674 Query: 5087 GYRFWDDKNRKILRHCDVTFDESVMYK------DKEQKVLEITKQVGVEV 4956 GY+ W K + +V FDE +YK DKEQ +++K+ V V Sbjct: 675 GYKVWLLDEEKCVISRNVVFDEDSVYKSLLPESDKEQIDGKLSKETTVTV 724 Score = 163 bits (409), Expect(2) = 5e-056 Identities = 94/213 (44%), Positives = 140/213 (65%), Gaps = 14/213 (6%) Frame = -2 Query: 4794 DEGEPESFDEALQ-VEDSIKWELAMDDE---MRSLEKNDTWVLTDLPAGKR---ALLNKW 4636 ++GE + A++ + DS E+A +E ++++ + + D P G + + +W Sbjct: 730 EKGESSASGGAIEEISDSSDSEVAATEEDSPIQTVNLENYQLARDRPEGPKDQHVISCRW 789 Query: 4635 VFRIKT*PDG--KRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHL 4474 +++IK G +R+KA LV +G DY E+F+PVVK SIRIL+ IV +++M L Sbjct: 790 LYKIKPGILGVESKRYKARLVARGFTQKKGIDYEEVFAPVVKHISIRILMSIVVADDMEL 849 Query: 4473 EQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFM 4294 EQMD KT LHG+LD+ +YM+QP+GF + VC L +SLYGLKQAPRQW KKF++FM Sbjct: 850 EQMDVKTALLHGELDQVLYMEQPEGFEADPNKDQVCLLKKSLYGLKQAPRQWNKKFNAFM 909 Query: 4293 TKSEFCKAEKDPCCYFKK-YTNSYVFLLLYLDDMLIEGSSMRENNNL 4156 F ++ D C Y K+ + +V+LL Y+DDMLI G SM E N + Sbjct: 910 MDQGFTRSLHDSCVYVKEVIPDQFVYLLFYVDDMLIAGKSMAEVNKV 956 Score = 88.5 bits (216), Expect(2) = 9e-027 Identities = 48/130 (36%), Positives = 72/130 (54%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG ER ++ L+E R LL +S L +W E TT YL+NR SV+ + + Sbjct: 570 YTPQQNGVAERMNRTLMEKVRCLLNESGLDESFWAEAASTTAYLVNRSPASVVDHNVPEE 629 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + K P Y +L+ FG + + ++ + K +PR +FLGYP GYKV +K Sbjct: 630 LWLGKKPGYKHLRRFGSIAY--VHQDQGKLKPRALKGVFLGYPQGVKGYKVWLLDEEKCV 687 Query: 65343 VSRDVSFYEN 65372 +SR+V F E+ Sbjct: 688 ISRNVVFDED 697 Score = 84.3 bits (205), Expect(2) = 5e-056 Identities = 47/105 (44%), Positives = 65/105 (61%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS FEMKD+G A +ILG+ I R+R TL LSQ Y+EKV+ RFR+ DAK +TP+ H Sbjct: 960 LSLHFEMKDMGAASRILGIDIERNREEGTLCLSQSKYLEKVIQRFRMADAKGVSTPIGAH 1019 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYL 3834 FKLS + + +E + PY+ + S++ M+ RPD Y L Sbjct: 1020 FKLS---AVRNNDESVDTEVCPYSSVVGSVMYAMIGNRPDVAYAL 1061 Score = 61.3 bits (146), Expect(2) = 9e-027 Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 2/117 (1%) Frame = +1 Query: 64603 TKKTFCVHC-LSHGQINTIIFPIKNTTSSNRFFDLLRLDLW-EPYHVLTHNGYKYFLMIV 64776 TK+T HC L H +N + K T L DLW P + +G +YFL I+ Sbjct: 449 TKRTSLWHCRLGHMSVNNM----KILTEKG----YLHADLWGSPNVTPSLSGKQYFLSII 500 Query: 64777 DDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 DD +R W L K T + LV NQ IK +RT NGLEF + + + Y KK Sbjct: 501 DDKTRKVWLMFLKTKDETFDKFCEWKELVENQVNKKIKVLRTDNGLEFCNLKFDEYCKK 559 Score = 60.9 bits (145), Expect = 3e-006 Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 4/130 (3%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLD-LEGIGSTVEQKL--YRGMIGSLLY-L 87702 + Q KY++++++RF+M DAK + TPI KL + +V+ ++ Y ++GS++Y + Sbjct: 991 LSQSKYLEKVIQRFRMADAKGVSTPIGAHFKLSAVRNNDESVDTEVCPYSSVVGSVMYAM 1050 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RPD+ +++GL +RF +NP G + + G+ D Sbjct: 1051 IGNRPDVAYALGLVSRFMSNP---------------------------GKDMKIHGFCDS 1083 Query: 87521 DYVGYLVDRKSTTG 87480 DY L R+S +G Sbjct: 1084 DYAADLDKRRSISG 1097 Score = 39.1 bits (89), Expect = 10.0 Identities = 26/87 (29%), Positives = 45/87 (50%), Gaps = 5/87 (5%) Frame = -2 Query: 6477 NQHG*SKSKN*GKPPNRSN----VTCLNCGEK*HFWTS-YTKPKKKQNQKFGDDNDSVNS 6313 N G ++ KN GK +RSN VTC C ++ H + + KK +N++ G+ + Sbjct: 246 NNQGNNQGKNQGKGKSRSNSKSRVTCWFCKKEGHVKKDCFARKKKFENEEQGEAG-VITE 304 Query: 6312 TEDIGDALILSVNSPVESWILDSGASFPFVSK 6217 +AL + E W++DSG ++ S+ Sbjct: 305 KLVYSEALSMHDQEAKEKWVIDSGCTYHITSR 336 >gb|AAC26251.1| (AF077408) contains similarity to reverse transcriptase (Pfam: rvt.hmm, score: 33.26) [Arabidopsis thaliana] Length = 973 Score = 244 bits (617), Expect = 1e-061 Identities = 147/350 (42%), Positives = 206/350 (58%), Gaps = 8/350 (2%) Frame = -1 Query: 39100 YYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCD 38921 + R +E L SF W C+ +FL+LK ++T+AP+L L EG +T+Y D Sbjct: 352 HLRAVLEQLREHELFAKLSKCSF-WQRSCEKNFLELKAMLTNAPVLVLPEEGEPYTVYTD 410 Query: 38920 ASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETY 38741 AS VG++ VLM++G I Y SR+L+ HE NYPT DLE+A +VFAL IWR YLYG + + Y Sbjct: 411 ASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLYGAKVQIY 470 Query: 38740 TDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSY 38561 TDH SL+ I Q +LN R RW+EL+ DYDL I YH GK N VA +LSR++ S Sbjct: 471 TDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRRR-------SE 523 Query: 38560 VCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV----QSSLYDRNRGWQFED*ALLSL 38393 V ER +D+ N M L + + +G+ Q++L R R L Sbjct: 524 VEAERS-QVDL---VNMMGTLHVNALSKEVEPLGLGAADQANLLSRIR--------LAQE 571 Query: 38392 RDQVLAG----DGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKM 38225 RD+ + G + + +G + +GR+ VP + IL EAH+ ++SIH G+ K+ Sbjct: 572 RDEEIKGWALNNKTEYQTSNNGTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGSNKI 631 Query: 38224 YRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDF 38051 YRDL+++Y W GM+ D+A +V++C Q VK EH G + L I EWKWD ITMDF Sbjct: 632 YRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDF 689 Score = 185 bits (465), Expect = 8e-044 Identities = 111/284 (39%), Positives = 154/284 (54%), Gaps = 4/284 (1%) Frame = +2 Query: 68642 ERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 E +Y DAS +GL CVLMQKG V+AYASRQL+ HEK Y HDLE+ VVFALKIW +YL Sbjct: 403 EPYTVYTDASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYL 462 Query: 68822 YGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV 69001 YG ++T+H+SL+YIF Q +L LR+R W+EL+ DYD+ I YH GK N VADALS + Sbjct: 463 YGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRRRS 522 Query: 69002 SMGSLAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDL 69181 + V L++ L+++ K LG + S+ L Sbjct: 523 EV----------EAERSQVDLVNMMGTLHVNALSKEVEPLGLGAADQANLLSRI----RL 568 Query: 69182 CKIRDKVLK----REAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGL 69349 + RD+ +K + G + + G +CVP + R + G Sbjct: 569 AQERDEEIKGWALNNKTEYQTSNNGTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGS 628 Query: 69350 LNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 IY DLK++Y MK+D+ +V++C CQ VK EHQ P G+ +P Sbjct: 629 NKIYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLP 676 Score = 165 bits (414), Expect(2) = 9e-060 Identities = 93/180 (51%), Positives = 121/180 (66%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GL VLM + +VI YASRQL+ HE NYPTHDL++AAVVFALK WR YLYG Sbjct: 405 YTVYTDASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLYG 464 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K ++YTDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH GKAN VADALSR+ Sbjct: 465 AKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRR---- 520 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 S ++ S+ L + TL + + EV E G A +A + L +I+ Q DE+++ Sbjct: 521 RSEVEAERSQVDLVNMMGTLHVNALSKEV-EPLGLGAADQA--NLLSRIRLAQERDEEIK 577 Score = 94.8 bits (232), Expect(2) = 9e-060 Identities = 42/87 (48%), Positives = 58/87 (66%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVCVP L IL EAH S++SIHPG+ K+Y DLK+++ W M+ D+ +V Sbjct: 593 GTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGSNKIYRDLKRYYHWVGMKKDVARWV 652 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A+CP CQ VK EHQ P G L+ +P E Sbjct: 653 AKCPTCQLVKAEHQVPSGLLQNLPIPE 679 Score = 94.4 bits (231), Expect = 2e-016 Identities = 46/89 (51%), Positives = 58/89 (64%) Frame = +2 Query: 56729 TNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKS 56908 T+V KTAF TR GH+EF+V FGL NAP AFM +MNG+F+ +L+ FVI+FIDDIL+YSKS Sbjct: 286 TDVRKTAFLTRYGHFEFVVMPFGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILVYSKS 345 Query: 56909 RKXXXXXXXXXXXXXXXKNLYAKFFKCEF 56995 + L+AK KC F Sbjct: 346 WEAHQEHLRAVLEQLREHELFAKLSKCSF 374 Score = 82.3 bits (200), Expect(2) = 2e-030 Identities = 51/157 (32%), Positives = 79/157 (49%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KLSPRY+GP++++ Sbjct: 784 KLKEAQDRQKSYANKRRKELEFQVEDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIER 843 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILAR 37149 G VAY+LDLPP +A H VF VS R + ++ + L + +T V I+ R Sbjct: 844 VGAVAYKLDLPPKLNAFHNVFHVSQLRKCLSNQEESVEDVPPGLKENMTVEAWPVQIMDR 903 Query: 37148 Y*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 + LL+ + + + W + K++F Sbjct: 904 MTKGTRGKSRDLLKVLWNCGGREQYTWETENKMKANF 940 Score = 80.0 bits (194), Expect(2) = 2e-030 Identities = 46/113 (40%), Positives = 60/113 (52%) Frame = -1 Query: 37846 FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAY 37667 F FQ LGTRV+LS A+HPQTD QSE TIQ LEDML C L++GG Sbjct: 690 FWKAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACALDWGG------------- 736 Query: 37666 NSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 N + L +ALYGR CR+ + W + R G ++ E+++ KI Sbjct: 737 ------NWEKYLRLALYGRACRTPLCWTPVGERRLFGPIIVDETTERMKFLKI 783 Score = 79.2 bits (192), Expect = 8e-012 Identities = 39/89 (43%), Positives = 48/89 (53%) Frame = +1 Query: 68104 DISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXXXXXXXXCRK 68283 D+ KTAF TRYGH+EF+VM F LTNA FM +MN FR + Sbjct: 287 DVRKTAFLTRYGHFEFVVMPFGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILVYSKSW 346 Query: 68284 EEHEHHLRTVFGILKEKKLYTKFSKCEIW 68370 E H+ HLR V L+E +L+ K SKC W Sbjct: 347 EAHQEHLRAVLEQLREHELFAKLSKCSFW 375 Score = 77.3 bits (187), Expect = 3e-011 Identities = 34/58 (58%), Positives = 43/58 (73%) Frame = +1 Query: 69727 MSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPL 69900 M FW + K LGTRV+LST +HPQTD QSE IQ LEDML AC +D+G +W+++L L Sbjct: 687 MDFFWKAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACALDWGGNWEKYLRL 744 Score = 46.9 bits (109), Expect(2) = 2e-008 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKS 39230 +Y SW H+ +LR VL+ LR+ L+AK SKC FW +S Sbjct: 341 VYSKSWEAHQEHLRAVLEQLREHELFAKLSKCSFWQRS 378 Score = 41.0 bits (94), Expect(2) = 2e-008 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ +M +FR LD FVIIF+DDILV Sbjct: 307 FGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILV 341 >emb|CAB80807.1| (AL161498) putative transposon protein [Arabidopsis thaliana] Length = 973 Score = 244 bits (617), Expect = 1e-061 Identities = 147/350 (42%), Positives = 206/350 (58%), Gaps = 8/350 (2%) Frame = -1 Query: 39100 YYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCD 38921 + R +E L SF W C+ +FL+LK ++T+AP+L L EG +T+Y D Sbjct: 352 HLRAVLEQLREHELFAKLSKCSF-WQRSCEKNFLELKAMLTNAPVLVLPEEGEPYTVYTD 410 Query: 38920 ASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETY 38741 AS VG++ VLM++G I Y SR+L+ HE NYPT DLE+A +VFAL IWR YLYG + + Y Sbjct: 411 ASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLYGAKVQIY 470 Query: 38740 TDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSY 38561 TDH SL+ I Q +LN R RW+EL+ DYDL I YH GK N VA +LSR++ S Sbjct: 471 TDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRRR-------SE 523 Query: 38560 VCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGV----QSSLYDRNRGWQFED*ALLSL 38393 V ER +D+ N M L + + +G+ Q++L R R L Sbjct: 524 VEAERS-QVDL---VNMMGTLHVNALSKEVEPLGLGAADQANLLSRIR--------LAQE 571 Query: 38392 RDQVLAG----DGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAKM 38225 RD+ + G + + +G + +GR+ VP + IL EAH+ ++SIH G+ K+ Sbjct: 572 RDEEIKGWALNNKTEYQTSNNGTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGSNKI 631 Query: 38224 YRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDF 38051 YRDL+++Y W GM+ D+A +V++C Q VK EH G + L I EWKWD ITMDF Sbjct: 632 YRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDF 689 Score = 185 bits (465), Expect = 8e-044 Identities = 111/284 (39%), Positives = 154/284 (54%), Gaps = 4/284 (1%) Frame = +2 Query: 68642 ERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYL 68821 E +Y DAS +GL CVLMQKG V+AYASRQL+ HEK Y HDLE+ VVFALKIW +YL Sbjct: 403 EPYTVYTDASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYL 462 Query: 68822 YGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAV 69001 YG ++T+H+SL+YIF Q +L LR+R W+EL+ DYD+ I YH GK N VADALS + Sbjct: 463 YGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRRRS 522 Query: 69002 SMGSLAMLQVSKRPLAKDVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDL 69181 + V L++ L+++ K LG + S+ L Sbjct: 523 EV----------EAERSQVDLVNMMGTLHVNALSKEVEPLGLGAADQANLLSRI----RL 568 Query: 69182 CKIRDKVLK----REAKAAILDSEGVLRIKGHICVPRTGI*LD*TWRRSIV*VTLFIQGL 69349 + RD+ +K + G + + G +CVP + R + G Sbjct: 569 AQERDEEIKGWALNNKTEYQTSNNGTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGS 628 Query: 69350 LNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 IY DLK++Y MK+D+ +V++C CQ VK EHQ P G+ +P Sbjct: 629 NKIYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLP 676 Score = 165 bits (414), Expect(2) = 9e-060 Identities = 93/180 (51%), Positives = 121/180 (66%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 + VY D S GL VLM + +VI YASRQL+ HE NYPTHDL++AAVVFALK WR YLYG Sbjct: 405 YTVYTDASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLYG 464 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 K ++YTDH+SL Y+FTQ +LNLR+RRWMEL+ D D+ I YH GKAN VADALSR+ Sbjct: 465 AKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYDLDIAYHAGKANQVADALSRR---- 520 Query: 57667 GSLAHSQVSRRPLAREVQTLANDFMRLEVLEKGGFFACVEARSSFLEKIKGNQFDDEKLR 57846 S ++ S+ L + TL + + EV E G A +A + L +I+ Q DE+++ Sbjct: 521 RSEVEAERSQVDLVNMMGTLHVNALSKEV-EPLGLGAADQA--NLLSRIRLAQERDEEIK 577 Score = 94.8 bits (232), Expect(2) = 9e-060 Identities = 42/87 (48%), Positives = 58/87 (66%) Frame = +3 Query: 57903 GILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDFV 58082 G +++ RVCVP L IL EAH S++SIHPG+ K+Y DLK+++ W M+ D+ +V Sbjct: 593 GTIVVNGRVCVPNNRALKEEILREAHQSKFSIHPGSNKIYRDLKRYYHWVGMKKDVARWV 652 Query: 58083 AQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 A+CP CQ VK EHQ P G L+ +P E Sbjct: 653 AKCPTCQLVKAEHQVPSGLLQNLPIPE 679 Score = 94.4 bits (231), Expect = 2e-016 Identities = 46/89 (51%), Positives = 58/89 (64%) Frame = +2 Query: 56729 TNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKS 56908 T+V KTAF TR GH+EF+V FGL NAP AFM +MNG+F+ +L+ FVI+FIDDIL+YSKS Sbjct: 286 TDVRKTAFLTRYGHFEFVVMPFGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILVYSKS 345 Query: 56909 RKXXXXXXXXXXXXXXXKNLYAKFFKCEF 56995 + L+AK KC F Sbjct: 346 WEAHQEHLRAVLEQLREHELFAKLSKCSF 374 Score = 82.3 bits (200), Expect(2) = 2e-030 Identities = 51/157 (32%), Positives = 79/157 (49%) Frame = -3 Query: 37508 RLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRI 37329 +L+ Q R +SYA+ RR L F V D ++L KG RF KLSPRY+GP++++ Sbjct: 784 KLKEAQDRQKSYANKRRKELEFQVEDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIER 843 Query: 37328 AGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILAR 37149 G VAY+LDLPP +A H VF VS R + ++ + L + +T V I+ R Sbjct: 844 VGAVAYKLDLPPKLNAFHNVFHVSQLRKCLSNQEESVEDVPPGLKENMTVEAWPVQIMDR 903 Query: 37148 Y*GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 + LL+ + + + W + K++F Sbjct: 904 MTKGTRGKSRDLLKVLWNCGGREQYTWETENKMKANF 940 Score = 80.0 bits (194), Expect(2) = 2e-030 Identities = 46/113 (40%), Positives = 60/113 (52%) Frame = -1 Query: 37846 FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAY 37667 F FQ LGTRV+LS A+HPQTD QSE TIQ LEDML C L++GG Sbjct: 690 FWKAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACALDWGG------------- 736 Query: 37666 NSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKI 37508 N + L +ALYGR CR+ + W + R G ++ E+++ KI Sbjct: 737 ------NWEKYLRLALYGRACRTPLCWTPVGERRLFGPIIVDETTERMKFLKI 783 Score = 79.2 bits (192), Expect = 8e-012 Identities = 39/89 (43%), Positives = 48/89 (53%) Frame = +1 Query: 68104 DISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXXXXXXXXCRK 68283 D+ KTAF TRYGH+EF+VM F LTNA FM +MN FR + Sbjct: 287 DVRKTAFLTRYGHFEFVVMPFGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILVYSKSW 346 Query: 68284 EEHEHHLRTVFGILKEKKLYTKFSKCEIW 68370 E H+ HLR V L+E +L+ K SKC W Sbjct: 347 EAHQEHLRAVLEQLREHELFAKLSKCSFW 375 Score = 77.3 bits (187), Expect = 3e-011 Identities = 34/58 (58%), Positives = 43/58 (73%) Frame = +1 Query: 69727 MSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPL 69900 M FW + K LGTRV+LST +HPQTD QSE IQ LEDML AC +D+G +W+++L L Sbjct: 687 MDFFWKAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACALDWGGNWEKYLRL 744 Score = 46.9 bits (109), Expect(2) = 2e-008 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKS 39230 +Y SW H+ +LR VL+ LR+ L+AK SKC FW +S Sbjct: 341 VYSKSWEAHQEHLRAVLEQLREHELFAKLSKCSFWQRS 378 Score = 41.0 bits (94), Expect(2) = 2e-008 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 F AP+AF+ +M +FR LD FVIIF+DDILV Sbjct: 307 FGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILV 341 >gb|AAC75058.1| (AE000291) IS2 hypothetical protein [Escherichia coli] Length = 136 Score = 244 bits (616), Expect = 2e-061 Identities = 123/124 (99%), Positives = 123/124 (99%) Frame = +2 Query: 20027 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGS 20206 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVS VARQHGVAASQLFLWRKQYQEGS Sbjct: 13 GEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSFVARQHGVAASQLFLWRKQYQEGS 72 Query: 20207 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 20386 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP Sbjct: 73 LTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLP 132 Query: 20387 GDGE 20398 GDGE Sbjct: 133 GDGE 136 >emb|CAA80824.1| (Z24451) pol protein [Drosophila ananassae] Length = 1040 Score = 176 bits (441), Expect(2) = 1e-060 Identities = 95/280 (33%), Positives = 161/280 (56%), Gaps = 6/280 (2%) Frame = +2 Query: 56408 TVTRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDES-----F 56572 T PI Y +A E++ Q+QE+L +G IR S +P+ + V KK ++ + Sbjct: 163 THNSPIYSKQYPLAQTHENEVENQVQEMLEQGLIRESNSPYNSPTWVVPKKPDASGKAKY 222 Query: 56573 RMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF 56752 R+ I+YR+LN++T+ +++ IP +D+ + F+ IDL G+ Q+++ + ++ KTAF Sbjct: 223 RVVIDYRKLNEITIPDRFPIPNMDEILGKLGKCQYFTTIDLARGFHQIEMDSESIQKTAF 282 Query: 56753 *TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXX 56932 T+ GHYE++ FGL+NAPA F MN I +P + +V++DD++I+S S Sbjct: 283 STKRGHYEYVRMPFGLRNAPATFQRCMNNILRPLINKHCLVYLDDMIIFSTSLDEHLNSL 342 Query: 56933 XXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDV 57112 NL + KCEF +FLGH+V+ DG+ + K+EA+ + PT V ++ Sbjct: 343 QLVFEKLSESNLKLQLDKCEFLKKEATFLGHIVTPDGIKPNPLKVEAIASYPIPTKVKEI 402 Query: 57113 TSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPF-IWSGECEESFQ 57247 +F+G+ YYR+FI ++ IA +T K+ I + E E+F+ Sbjct: 403 RAFLGMTGYYRKFIPSYADIAKPMTRYLKKGAKIDINNHEYVEAFE 448 Score = 156 bits (390), Expect = 5e-035 Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 11/291 (3%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE++ M GL P ++ C + L L++ + Y ++ S EH L++ Sbjct: 289 YEYVRMPFGLRNA-PATF---QRCMNNILRPLINKHCLVYLDDMIIFSTSLDEHLNSLQL 344 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 V + L + L + KCEF K F GH+V+ +GI+ +P+K+EAI + PT V E+ + Sbjct: 345 VFEKLSESNLKLQLDKCEFLKKEATFLGHIVTPDGIKPNPLKVEAIASYPIPTKVKEIRA 404 Query: 39118 FVGLVSYYRRFVEGFSTSATHLNLQ-------DVSFMWLVKCDMSFLKLKELITSAPILT 38960 F+G+ YYR+F+ ++ A + D++ V+ +F KLK LITS PIL Sbjct: 405 FLGMTGYYRKFIPSYADIAKPMTRYLKKGAKIDINNHEYVE---AFEKLKTLITSEPILQ 461 Query: 38959 LLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMI 38780 L F + DAS + + VL + I ++SR L HELNY T + EL IV+A Sbjct: 462 LPNFEKKFVLTTDASNLALGAVLSQDNHPISFISRTLNDHELNYSTIEKELLAIVWATKT 521 Query: 38779 WRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSL 38600 +RHYL G ++ +DH L+ + ++ N++ RW L ++D I Y GK+N +A +L Sbjct: 522 FRHYLLGRHFQIASDHQPLRWLHNLKEPNAKLQRWRIRLAEFDFHIEYIKGKQNSIADAL 581 Query: 38599 SR 38594 SR Sbjct: 582 SR 583 Score = 102 bits (252), Expect = 8e-019 Identities = 63/206 (30%), Positives = 106/206 (50%), Gaps = 3/206 (1%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +V+ + I +P K+E I + P V +I +FLG+ GYYR+ + SY Sbjct: 374 IVTPDGIKPNPLKVEAIASYPIPTKVKEIRAFLGMTGYYRKFIPSYADIAKPMTRYLKKG 433 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQ---WRERVLLYIDASQIGLGCVLMQKGKVVAY 68722 + + V +L L+ Q + ++ +L DAS + LG VL Q +++ Sbjct: 434 AKIDINNHEYVEAFEKLKTLITSEPILQLPNFEKKFVLTTDASNLALGAVLSQDNHPISF 493 Query: 68723 ASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRK 68902 SR L HE Y + EL+ +V+A K + +YL G HF + ++H+ L+++ N ++ + Sbjct: 494 ISRTLNDHELNYSTIEKELLAIVWATKTFRHYLLGRHFQIASDHQPLRWLHNLKEPNAKL 553 Query: 68903 RIWLELLKDYDMTILYHPGKTNVVADALS 68989 + W L ++D I Y GK N +ADALS Sbjct: 554 QRWRIRLAEFDFHIEYIKGKQNSIADALS 582 Score = 87.0 bits (212), Expect(2) = 1e-060 Identities = 47/115 (40%), Positives = 69/115 (59%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F++ D S LGAVL + + I++ SR L HE NY T + +L A+V+A K +RHYL G Sbjct: 469 FVLTTDASNLALGAVLSQDNHPISFISRTLNDHELNYSTIEKELLAIVWATKTFRHYLLG 528 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 ++ +DH+ L ++ K+ N + +RW L + D I Y GK N +ADALSR Sbjct: 529 RHFQIASDHQPLRWLHNLKEPNAKLQRWRIRLAEFDFHIEYIKGKQNSIADALSR 583 Score = 70.6 bits (170), Expect(2) = 1e-018 Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 12/206 (5%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ IDL +HQ+++ E I KTAF T+ GHYE++ M F L NA ATF MN R Sbjct: 255 CQYFTTIDLARGFHQIEMDSESIQKTAFSTKRGHYEYVRMPFGLRNAPATFQRCMNNILR 314 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG- 68397 +EH + L+ VF L E L + KCE +L + + G Sbjct: 315 PLINKHCLVYLDDMIIFSTSLDEHLNSLQLVFEKLSESNLKLQLDKCE-FLKKEATFLGH 373 Query: 68398 --GSEKD*DN*RLD*TCFSY---SDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KE 68547 + N SY + +K +R ++ Y + IA +TR K Sbjct: 374 IVTPDGIKPNPLKVEAIASYPIPTKVKEIRAFLGMTGYYRKFIPSYADIAKPMTRYLKKG 433 Query: 68548 VTF-LWSDECEVSFQKLKT*LTTARILTLPVEREGFVV 68658 + + E +F+KLKT +T+ IL LP + FV+ Sbjct: 434 AKIDINNHEYVEAFEKLKTLITSEPILQLPNFEKKFVL 471 Score = 51.5 bits (121), Expect(2) = 1e-018 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYM-----HMCI 67957 PI+ Y + E+++Q+Q++L + IR S S + +P V +K + + I Sbjct: 167 PIYSKQYPLAQTHENEVENQVQEMLEQGLIRESNSPYNSPTWVVPKKPDASGKAKYRVVI 226 Query: 67958 DYRQLNKITIIN*YPIPRIDDL 68023 DYR+LN+ITI + +PIP +D++ Sbjct: 227 DYRKLNEITIPDRFPIPNMDEI 248 >gb|AAD39272.1|AC007203_4 (AC007203) Similar to retrotransposon polyprotein [Arabidopsis thaliana] Length = 1264 Score = 180 bits (453), Expect(2) = 6e-051 Identities = 169/629 (26%), Positives = 265/629 (41%), Gaps = 4/629 (0%) Frame = -1 Query: 39478 TIKG-YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYWLYLWSWSEHELYLR 39302 T++G YEFL+MS GLT + + S L + + +Y S H +LR Sbjct: 466 TLEGHYEFLVMSFGLTNAPATFQSSMNRISKKLLRKFVLVFFDHILIYSPSVESHVKHLR 525 Query: 39301 IVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVH 39122 VLQ L D +LY KC F ++ V + GH++S EG+ D K EA+ W P+++ ++ Sbjct: 526 EVLQLLADNKLYENMKKCSFGVQQVEYLGHIISAEGVVTDSTKTEAMHNWQVPSNLKQLR 585 Query: 39121 SFVGLVSYYRRFVEGFSTSATHLN--LQDVSFMWLVKCDMSFLKLKELITSAPILTLLVE 38948 F+GL YY +FV G+ + A L L+ F+WL +F ++K+ + AP+L Sbjct: 586 GFLGLTGYYIKFVRGYGSIAKTLTELLKRDKFLWLTMTQDAFEQVKQAMILAPVLGFPDF 645 Query: 38947 GGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHY 38768 F + D G GV VLM++ I Y S +L E + EL IV ++ W+HY Sbjct: 646 DKVFFLETDVFGTGVGAVLMQEKRRITYFSHDLTPREQLKSAYERELMAIVMDVLKWKHY 705 Query: 38767 LYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSRKQ 38588 L G +++ +TD SL+ ++ Q+++N RW+ L D+ I+Y PG N A LSR Q Sbjct: 706 LIGRKFKVHTDQRSLKFLLEQKEVNMEYQRWLTRLLGCDMDIVYKPGVANKAADGLSRIQ 765 Query: 38587 *VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQFED* 38408 +P Y AL + + +++L Y D + Q Sbjct: 766 -----HPVY-------ALLLALTVPYVIQLQDLYKE------------IDEDEHIQS--- 798 Query: 38407 ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLGTAK 38228 + L D L G Q +G L + + P I LIL E Sbjct: 799 VIKQLHDNQLQGSHYQLV---NGRLWYKQLLVFPKHSSFIPLILQE-------------- 841 Query: 38227 MYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMD-F 38051 YRD +W + D +E L + G + + DR++ + Sbjct: 842 -YRDT----VWEDISVDF--------------IEGLPTSGGVNVILVVV---DRLSKAVY 879 Query: 38050 VAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISD 37871 GL K +D V ++ K +G P SI+SD Sbjct: 880 FLGLKHLFKAIDVANKFVSEVVK--------------------------LYGFPKSIVSD 913 Query: 37870 RGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQF 37691 R F GT++ S ++ PQTD Q+E + LE L ++ Sbjct: 914 RDRIFLGAVWKDMFKLSGTQLKHSTSYRPQTDGQTEVLNRCLETYLRCFTSSHPRAWHKY 973 Query: 37690 SPLAQFAYNSIFHSNIQMVLFVALYGRICRSLV 37592 +F++N+ +HS ++ F +YGR SLV Sbjct: 974 LAWVEFSFNTAYHSALKTSPFKVVYGRDPPSLV 1006 Score = 169 bits (425), Expect(2) = 2e-060 Identities = 90/217 (41%), Positives = 126/217 (57%) Frame = +2 Query: 56597 LNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYE 56776 + T+ +K+ IP I+ D + GA +FSKIDL SGY Q+++ ++ KTAF T GHYE Sbjct: 413 IRPTTIPDKFPIPVIELLLDELHGAMIFSKIDLCSGYHQIRMKPEDIEKTAFHTLEGHYE 472 Query: 56777 FLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXX 56956 FLV SFGL NAPA F MN I K L FV+VF D ILIYS S + Sbjct: 473 FLVMSFGLTNAPATFQSSMNRISKKLLRKFVLVFFDHILIYSPSVESHVKHLREVLQLLA 532 Query: 56957 XKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLAS 57136 LY KC F + V +LGH++S +GV+ D +K EA+ W P+N+ + F+GL Sbjct: 533 DNKLYENMKKCSFGVQQVEYLGHIISAEGVVTDSTKTEAMHNWQVPSNLKQLRGFLGLTG 592 Query: 57137 YYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YY +F+ + SIA LT L K++ F+W +++F+ Sbjct: 593 YYIKFVRGYGSIAKTLTELLKRD-KFLWLTMTQDAFE 628 Score = 103 bits (255), Expect = 3e-019 Identities = 55/154 (35%), Positives = 92/154 (59%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E I+VD + L T G +VI V+V+RL+K+ +F+ ++ + +A ++ E+V+L+G Sbjct: 848 EDISVDFIEGLP-TSGGVNVILVVVDRLSKAVYFLGLKHLFKAIDVANKFVSEVVKLYGF 906 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 SI+SDR F+ W M K GT++ ST++ PQTD Q+E + + LE L Sbjct: 907 PKSIVSDRDRIFLGAVWKDMFKLSGTQLKHSTSYRPQTDGQTEVLNRCLETYLRCFTSSH 966 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 W ++L VEF++N +YH + + +PF+ +YGR Sbjct: 967 PRAWHKYLAWVEFSFNTAYHSALKTSPFKVVYGR 1000 Score = 99.1 bits (243), Expect = 9e-018 Identities = 61/206 (29%), Positives = 101/206 (48%), Gaps = 1/206 (0%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S E ++ D K E + +W P+++ Q+ FLGL GYY + + Y Sbjct: 556 IISAEGVVTDSTKTEAMHNWQVPSNLKQLRGFLGLTGYYIKFVRGYGSIAKTLTELLKRD 615 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVL-LYIDASQIGLGCVLMQKGKVVAYAS 68728 LT + F+ + +L + ++V L D G+G VLMQ+ + + Y S Sbjct: 616 KFLWLTMTQDAFEQVKQAMILAPVLGFPDFDKVFFLETDVFGTGVGAVLMQEKRRITYFS 675 Query: 68729 RQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRI 68908 L E+ ++ EL+ +V + W +YL G F V T+ RSL+++ Q+++ + + Sbjct: 676 HDLTPREQLKSAYERELMAIVMDVLKWKHYLIGRKFKVHTDQRSLKFLLEQKEVNMEYQR 735 Query: 68909 WLELLKDYDMTILYHPGKTNVVADALS 68989 WL L DM I+Y PG N AD LS Sbjct: 736 WLTRLLGCDMDIVYKPGVANKAADGLS 762 Score = 97.9 bits (240), Expect = 2e-017 Identities = 77/199 (38%), Positives = 96/199 (47%), Gaps = 11/199 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G FSKIDL S YHQ++++ EDI KTAF T GHYEFLVM F LTNA ATF MN Sbjct: 436 GAMIFSKIDLCSGYHQIRMKPEDIEKTAFHTLEGHYEFLVMSFGLTNAPATFQSSMNRIS 495 Query: 68218 RQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 ++ E H HLR V +L + KLY KC + Q Y G Sbjct: 496 KKLLRKFVLVFFDHILIYSPSVESHVKHLREVLQLLADNKLYENMKKCSFGVQ-QVEYLG 554 Query: 68398 ------GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*K 68544 G D S+LK LR L+ Y + SIA TLT L K Sbjct: 555 HIISAEGVVTDSTKTEAMHNWQVPSNLKQLRGFLGLTGYYIKFVRGYGSIAKTLTELL-K 613 Query: 68545 EVTFLWSDECEVSFQKLKT*LTTARILTLP 68634 FLW + +F+++K + A +L P Sbjct: 614 RDKFLWLTMTQDAFEQVKQAMILAPVLGFP 643 Score = 92.4 bits (226), Expect(2) = 2e-060 Identities = 48/115 (41%), Positives = 70/115 (60%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + DV +G+GAVLM E+ ITY S L E ++ +L A+V + +W+HYL G Sbjct: 649 FFLETDVFGTGVGAVLMQEKRRITYFSHDLTPREQLKSAYERELMAIVMDVLKWKHYLIG 708 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 K +V+TD RSL ++ QK++N+ +RW+ L D+ I+Y G AN AD LSR Sbjct: 709 RKFKVHTDQRSLKFLLEQKEVNMEYQRWLTRLLGCDMDIVYKPGVANKAADGLSR 763 Score = 50.0 bits (117), Expect(2) = 6e-051 Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 3/122 (2%) Frame = -3 Query: 37523 ESIQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSP--MKGVMRFGRWGKLSPRYIG 37350 E I+ L+ Q + AD++R + F+V D + L + P + V+R + KL+ ++ G Sbjct: 1030 EHIRANLQRAQEIMKRNADMKRRDVVFAVGDWVHLKLQPYRQRTVVRRPCY-KLAAKFFG 1088 Query: 37349 PFEILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVEL-DDRLTFVE 37173 PFEI+ G VAY ++LP + S IH VF VS + ++ V + +L +D F E Sbjct: 1089 PFEIVERIGNVAYRINLPAS-SKIHNVFNVSQLKKVFGEQQVVQATNPPKLVEDEFLFPE 1147 Query: 37172 ELVVI 37158 ++V I Sbjct: 1148 KIVDI 1152 >gb|AAF48838.2| (AE003508) CG15054 gene product [Drosophila melanogaster] Length = 681 Score = 180 bits (451), Expect(2) = 4e-060 Identities = 99/262 (37%), Positives = 149/262 (56%), Gaps = 5/262 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKK-----DESFRMCI 56584 PI Y+ E+ Q+ E+L +G IR S +P+ + + V+KK + +R+ + Sbjct: 56 PIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVV 115 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 +YR+LNK T+++++ IP ID+ FD + +FS +DL G+ Q+++ +V KTAF T Sbjct: 116 DYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTS 175 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GHYEFL FGL+NAP+ F LMN I PY F IV++DDILI+SK+ Sbjct: 176 GHYEFLRMPFGLRNAPSTFQRLMNNILSPYTGQFCIVYMDDILIFSKNIGEHVNHLSCIF 235 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 NL + KCEF + FLGH ++ +G+ KI+A+ PTN + SF+ Sbjct: 236 SCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFL 295 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTKQN 57205 G+ Y RR+I +S IA L K+N Sbjct: 296 GITGYLRRYIKDYSKIAQPLIKYLKKN 322 Score = 130 bits (323), Expect(2) = 1e-029 Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 10/241 (4%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L + L L + KCEF + + F GH ++ EG++ KI+AIC + P Sbjct: 226 EHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLP 285 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSA----------THLNLQDVSFMWLVKCDMSFLKL 38993 T+ ++ SF+G+ Y RR+++ +S A + +N D ++ +F KL Sbjct: 286 TNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNSKINTHDQEYV------EAFQKL 339 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K LITS PI+ FTI DAS + VLM+ I Y SR LK HELNY T + Sbjct: 340 KILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVISYASRSLKNHELNYSTIEK 399 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL I ++ +++Y+YG ++ TDH L + ++ N + RW L ++D I + Sbjct: 400 ELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLKLQRWKVQLNEFDFDITFI 459 Query: 38632 PGKKNMVAYSL 38600 N+ + L Sbjct: 460 KEINNLDIFML 470 Score = 86.6 bits (211), Expect(3) = 4e-040 Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 4/192 (2%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 ++ E + KKI+ I P + QI SFLG+ GY RR + Y Sbjct: 264 INSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNS 323 Query: 68555 SCGLTSVRLVFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVLMQKGKVVAY 68722 V +L +L+ P + ++ + DAS LG VLMQ KV++Y Sbjct: 324 KINTHDQEYVEAFQKLK-ILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVISY 382 Query: 68723 ASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRK 68902 ASR LK HE Y + EL+ + ++ K + Y+YG F + T+HR L ++ N ++ L+ Sbjct: 383 ASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLKL 442 Query: 68903 RIWLELLKDYDMTILY 68950 + W L ++D I + Sbjct: 443 QRWKVQLNEFDFDITF 458 Score = 81.5 bits (198), Expect(2) = 4e-060 Identities = 42/101 (41%), Positives = 62/101 (60%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D S LGAVLM + VI+YASR LK HE NY T + +L A+ ++ K +++Y+YG Sbjct: 358 FTIVTDASNYALGAVLMQDNKVISYASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYG 417 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILY 57609 K + TDHR L ++ K+ NL+ +RW L + D I + Sbjct: 418 RKFIIKTDHRPLVWLNNLKEPNLKLQRWKVQLNEFDFDITF 458 Score = 70.6 bits (170), Expect(3) = 4e-040 Identities = 39/108 (36%), Positives = 52/108 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C FS +DL ++Q+++ +D+ KTAF T GHYEFL M F L NA +TF LMN Sbjct: 144 CKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMNNILS 203 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 Y EH +HL +F L + L + KCE Sbjct: 204 PYTGQFCIVYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCE 251 Score = 57.8 bits (137), Expect(3) = 4e-040 Identities = 35/112 (31%), Positives = 64/112 (56%), Gaps = 5/112 (4%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ +F +F + D+ S+I I + PI+ Y+ E+ Q+ ++L++ Sbjct: 24 LIQKFEHIFYKEGQDLSFTSEIKHRI-ITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQ 82 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMH-----MCIDYRQLNKITIIN*YPIPRIDDLFD 68029 IR S S + +PL V++K + + + +DYR+LNK TI + +PIP ID++FD Sbjct: 83 GIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFD 139 Score = 29.0 bits (63), Expect(2) = 1e-029 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 APS F LM + F I++MDDIL+ Sbjct: 190 APSTFQRLMNNILSPYTGQFCIVYMDDILI 219 >gb|AAD10296.1| (U82084) unknown [bacteriophage SfX] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >gb|AAF70033.1|AF250878_194 (AF250878) IS2 hypothetical orf [Salmonella typhi] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >gb|AAD44740.1|AF141323_11 (AF141323) TnpG [Shigella flexneri] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >gb|AAC76080.1| (AE000386) IS2 hypothetical protein [Escherichia coli] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >gb|AAC75900.1| (AE000369) IS2 hypothetical protein [Escherichia coli] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >emb|CAA23542.1| (V00279) ORF 1 (AA 1-121) [Escherichia coli] Length = 121 Score = 239 bits (604), Expect = 4e-060 Identities = 121/121 (100%), Positives = 121/121 (100%) Frame = +2 Query: 20036 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 20215 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA Sbjct: 1 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA 60 Query: 20216 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 20395 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG Sbjct: 61 VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG 120 Query: 20396 E 20398 E Sbjct: 121 E 121 >gb|AAF21678.1|AF051915_2 (AF051915) pol polyprotein [Cladosporium fulvum] Length = 1243 Score = 226 bits (571), Expect = 3e-056 Identities = 182/619 (29%), Positives = 282/619 (45%), Gaps = 15/619 (2%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYWLYL--WSWSEHELYLRIVL 39293 YEFL+M +GLT P S + +L+ + ++M L S EH ++ V Sbjct: 438 YEFLVMPMGLTNA-PASCQDLVNETLRDLLDVCVVAYMDDILVYTKGSLQEHTKQVQDVF 496 Query: 39292 QTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHSFV 39113 + L KCEF K V F G ++S GI +DP K ++I W P +V +V SF+ Sbjct: 497 ERLTKSGFKTAPEKCEFHKKEVKFLGFIISTTGITIDPAKTQSIREWPEPKTVKDVQSFL 556 Query: 39112 GLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGG 38942 GL +Y R+F++ +S +A T L +DV++ W + +F +LKE SAP L L Sbjct: 557 GLANYNRKFIKDYSKTAAPMTMLTRKDVNWKWGKEQTEAFKRLKEQCASAPTLRLFDGSK 616 Query: 38941 GFTIYCDASGVGVDFVLMK----QGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWR 38774 I DAS + + L + + + Y SR++ E NY D EL IV A+ WR Sbjct: 617 EVHIETDASDMAIGACLTQTHDGKRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWR 676 Query: 38773 HYLYGVQYET-YTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLS 38597 Y+ G T +DH +L ++L R RW ELL Y I Y PG +N A +LS Sbjct: 677 VYVEGPPKLTILSDHKNLTYFTTTKELTRRQARWSELLGQYKFEIKYTPGTENGPADALS 736 Query: 38596 RKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQF 38417 R+ Y+ G+ P+ I D S + + L D+ + Sbjct: 737 RRS-------DYMEGKEPVQHKI-----LKTNPDGSLSANTREFNNIVRILSDKEEQFPI 784 Query: 38416 ED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLG 38237 G+ VP D + + + H+ H G Sbjct: 785 S-----------------------------QGKYQVPK--DREEECIRQHHDEPTYGHPG 813 Query: 38236 TAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITM 38057 T+K +++ + + MR + ++ +C+ QQ K G + + WD +TM Sbjct: 814 TSKTVDLIQRSFSFPQMRLKVLRYIKKCVHCQQNKAARHAKYGHLQFRTPPTKPWDEVTM 873 Query: 38056 DFVAGLPQ-----TSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGV 37892 DF+ LP+ T + D I V+VD+LTK AHF+P +++ +L + + ++R+HG Sbjct: 874 DFITKLPRSKDRVTGQAYDMILVMVDRLTKYAHFIPASEIYTAEQLGYLVLDRLIRYHGF 933 Query: 37891 PVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEF 37712 P I+DR FTS + T +G + LS A+HP+TD Q+E T Q LE L + Sbjct: 934 PEVFITDRDKLFTSNYWKTLMGTIGIKHKLSTAYHPETDGQTERTNQTLEQYLRHYINYA 993 Query: 37711 GGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGR 37610 P+AQ A N+ F A +G+ Sbjct: 994 QDNWVSLLPMAQIALNNHKSETTSTTPFYANFGK 1027 Score = 182 bits (457), Expect(2) = 5e-060 Identities = 100/272 (36%), Positives = 160/272 (58%), Gaps = 1/272 (0%) Frame = +2 Query: 56432 PPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVT 56611 P Y+M+ EL+ L+ L+E L KG+IR S + G +FV K + R+ +YR+LN++T Sbjct: 325 PLYQMSEKELQTLREWLKEKLAKGWIRRSTSSAGTPCMFVPKANGKLRLVQDYRKLNEIT 384 Query: 56612 LKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKS 56791 +KN+Y +P I++ D + G+ ++KIDL + +++ KTAF TR G YEFLV Sbjct: 385 IKNRYPLPNIEEAQDRLTGSDWYTKIDLRDAFYAIRMAEGEEWKTAFRTRYGLYEFLVMP 444 Query: 56792 FGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLY 56971 GL NAPA+ L+N + L++ V+ ++DDIL+Y+K K+ + Sbjct: 445 MGLTNAPASCQDLVNETLRDLLDVCVVAYMDDILVYTKGSLQEHTKQVQDVFERLTKSGF 504 Query: 56972 AKF-FKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 KCEF V FLG ++S G+ +D +K ++++ W +P V DV SF+GLA+Y R+ Sbjct: 505 KTAPEKCEFHKKEVKFLGFIISTTGITIDPAKTQSIREWPEPKTVKDVQSFLGLANYNRK 564 Query: 57149 FI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 FI +S A +T LT+++V + W E E+F+ Sbjct: 565 FIKDYSKTAAPMTMLTRKDVNWKWGKEQTEAFK 597 Score = 96.3 bits (236), Expect(2) = 8e-019 Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 5/152 (3%) Frame = +1 Query: 69517 IAVDIVVELSRTLGK-----FDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRL 69681 + +D + +L R+ + +D+I V+V+RLTK AHF+P Y ++L + + ++R Sbjct: 871 VTMDFITKLPRSKDRVTGQAYDMILVMVDRLTKYAHFIPASEIYTAEQLGYLVLDRLIRY 930 Query: 69682 HGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACV 69861 HG I+DR F S++W ++ +G + LST +HP+TD Q+E Q LE L + Sbjct: 931 HGFPEVFITDRDKLFTSNYWKTLMGTIGIKHKLSTAYHPETDGQTERTNQTLEQYLRHYI 990 Query: 69862 IDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 ++W LP+ + A NN + PF A +G+ Sbjct: 991 NYAQDNWVSLLPMAQIALNNHKSETTSTTPFYANFGK 1027 Score = 94.4 bits (231), Expect(3) = 1e-043 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 11/209 (5%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S I +DP K ++I++W P +V + SFLGLA Y R+ + Y Sbjct: 524 IISTTGITIDPAKTQSIREWPEPKTVKDVQSFLGLANYNRKFIKDYSKTAAPMTMLTRKD 583 Query: 68552 LSCGLTSV------RLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---- 68701 ++ RL + + L L + + V + DAS + +G L Q Sbjct: 584 VNWKWGKEQTEAFKRLKEQCASAPTLRL----FDGSKEVHIETDASDMAIGACLTQTHDG 639 Query: 68702 KGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV-HFAVFTNHRSLQYIFN 68878 K VAY SR++ E+ Y IHD EL+ +V A++ W Y+ G + ++H++L Y Sbjct: 640 KRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWRVYVEGPPKLTILSDHKNLTYFTT 699 Query: 68879 QRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKA 68998 ++L R+ W ELL Y I Y PG N ADALS ++ Sbjct: 700 TKELTRRQARWSELLGQYKFEIKYTPGTENGPADALSRRS 739 Score = 78.8 bits (191), Expect(2) = 5e-060 Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%) Frame = +1 Query: 57322 DVSYSGLGAVLM*----ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGV 57489 D S +GA L +R+ + Y SR++ E NY HD +L A+V A++ WR Y+ G Sbjct: 623 DASDMAIGACLTQTHDGKRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWRVYVEGP 682 Query: 57490 -KCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 K + +DH++L Y T K+L R+ RW ELL I Y G N ADALSR+ Sbjct: 683 PKLTILSDHKNLTYFTTTKELTRRQARWSELLGQYKFEIKYTPGTENGPADALSRR 738 Score = 71.4 bits (172), Expect(3) = 1e-043 Identities = 37/102 (36%), Positives = 63/102 (61%) Frame = +2 Query: 67739 VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLL 67918 +P D I++ G +P + P Y+++ EL+ +++ L++ L K +IR S SS G P + Sbjct: 303 LPKHQPWDHKINIQPGKEPPWGPLYQMSEKELQTLREWLKEKLAKGWIRRSTSSAGTPCM 362 Query: 67919 FVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGA 68044 FV + + + + DYR+LN+ITI N YP+P I++ D L G+ Sbjct: 363 FVPKANGKLRLVQDYRKLNEITIKNRYPLPNIEEAQDRLTGS 404 Score = 61.3 bits (146), Expect(3) = 1e-043 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 ++KIDLR ++ +++ E + KTAF+TRYG YEFLVM LTNA A+ DL+N R Sbjct: 407 YTKIDLRDAFYAIRMAEGEEWKTAFRTRYGLYEFLVMPMGLTNAPASCQDLVNETLRDLL 466 Query: 68230 XX-XXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 +EH ++ VF L + T KCE Sbjct: 467 DVCVVAYMDDILVYTKGSLQEHTKQVQDVFERLTKSGFKTAPEKCE 512 Score = 26.6 bits (57), Expect(2) = 8e-019 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 69392 RMKRDIVDFVSRCLNCQQVK-HEHQKPGGVTLRIP 69493 +M+ ++ ++ +C++CQQ K H K G + R P Sbjct: 829 QMRLKVLRYIKKCVHCQQNKAARHAKYGHLQFRTP 863 >emb|CAA77891.1| (Z11866) Reverse Transcriptase [Cladosporium fulvum] Length = 1045 Score = 225 bits (567), Expect = 9e-056 Identities = 187/636 (29%), Positives = 289/636 (45%), Gaps = 17/636 (2%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYWLYL--WSWSEHELYLRIVL 39293 YEFL+M +GLT P S + +L+ + ++M L S EH ++ V Sbjct: 438 YEFLVMPMGLTNA-PASCQDLVNETLRDLLDVCVVAYMDDILVYTKGSLQEHTKQVQDVF 496 Query: 39292 QTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHSFV 39113 + L KCEF K V F G ++S GI +DP K ++I W P +V +V SF+ Sbjct: 497 ERLTKSGFKTAPEKCEFHKKEVKFLGFIISTTGITIDPAKTQSIREWPEPKTVKDVQSFL 556 Query: 39112 GLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGG 38942 GL +Y R+F++ +S +A T L +DV++ W + +F +LKE SAP L L Sbjct: 557 GLANYNRKFIKDYSKTAAPMTMLTRKDVNWKWGKEQTEAFKRLKEQCASAPTLRLFDGSK 616 Query: 38941 GFTIYCDASGVGVDFVLMK----QGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWR 38774 I DAS + + L + + + Y SR++ E NY D EL IV A+ WR Sbjct: 617 EVHIETDASDMAIGACLTQTHDGKRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWR 676 Query: 38773 HYLYGVQYET-YTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLS 38597 Y+ G T +DH +L ++L R RW ELL Y I Y PG +N A +LS Sbjct: 677 VYVEGPPKLTILSDHKNLTYFTTTKELTRRQARWSELLGQYKFEIKYTPGTENGPADALS 736 Query: 38596 RKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNRGWQF 38417 R+ Y+ G+ P+ I D S + + L D+ + Sbjct: 737 RRS-------DYMEGKEPVQHKI-----LKTNPDGSLSANTREFNNIVRILSDKEEQFPI 784 Query: 38416 ED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAHEFRYSIHLG 38237 G+ VP D + + + H+ H G Sbjct: 785 S-----------------------------QGKYQVPK--DREEECIRQHHDEPTYGHPG 813 Query: 38236 TAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITM 38057 T+K +++ + + MR + ++ +C+ QQ K G + + WD +TM Sbjct: 814 TSKTVDLIQRSFSFPQMRLKVLRYIKKCVHCQQNKAARHAKYGHLQFRTPPTKPWDEVTM 873 Query: 38056 DFVAGLPQ-----TSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGV 37892 DF+ LP+ T + D I V+VD+LTK AHF+P +++ +L + + ++R+HG Sbjct: 874 DFITKLPRSKDRVTGQAYDMILVMVDRLTKYAHFIPASEIYTAEQLGYLVLDRLIRYHGF 933 Query: 37891 PVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEF 37712 P I+DR FTS + T +G + LS A+HP+TD Q+E T Q LE L + Sbjct: 934 PEVFITDRDKLFTSNYWKTLMGTIGIKHKLSTAYHPETDGQTERTNQTLEQYLRHYINYA 993 Query: 37711 GGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDP--RPR 37559 P+AQ A N+ F+ R + + E +DP RPR Sbjct: 994 QDNWVSLLPMAQIALNNHKSETTSTTPFMRTLAR----TLTYPEHLDPTHRPR 1042 Score = 182 bits (457), Expect(2) = 5e-060 Identities = 100/272 (36%), Positives = 160/272 (58%), Gaps = 1/272 (0%) Frame = +2 Query: 56432 PPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVT 56611 P Y+M+ EL+ L+ L+E L KG+IR S + G +FV K + R+ +YR+LN++T Sbjct: 325 PLYQMSEKELQTLREWLKEKLAKGWIRRSTSSAGTPCMFVPKANGKLRLVQDYRKLNEIT 384 Query: 56612 LKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKS 56791 +KN+Y +P I++ D + G+ ++KIDL + +++ KTAF TR G YEFLV Sbjct: 385 IKNRYPLPNIEEAQDRLTGSDWYTKIDLRDAFYAIRMAEGEEWKTAFRTRYGLYEFLVMP 444 Query: 56792 FGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLY 56971 GL NAPA+ L+N + L++ V+ ++DDIL+Y+K K+ + Sbjct: 445 MGLTNAPASCQDLVNETLRDLLDVCVVAYMDDILVYTKGSLQEHTKQVQDVFERLTKSGF 504 Query: 56972 AKF-FKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 KCEF V FLG ++S G+ +D +K ++++ W +P V DV SF+GLA+Y R+ Sbjct: 505 KTAPEKCEFHKKEVKFLGFIISTTGITIDPAKTQSIREWPEPKTVKDVQSFLGLANYNRK 564 Query: 57149 FI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 FI +S A +T LT+++V + W E E+F+ Sbjct: 565 FIKDYSKTAAPMTMLTRKDVNWKWGKEQTEAFK 597 Score = 94.4 bits (231), Expect(3) = 1e-043 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 11/209 (5%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S I +DP K ++I++W P +V + SFLGLA Y R+ + Y Sbjct: 524 IISTTGITIDPAKTQSIREWPEPKTVKDVQSFLGLANYNRKFIKDYSKTAAPMTMLTRKD 583 Query: 68552 LSCGLTSV------RLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---- 68701 ++ RL + + L L + + V + DAS + +G L Q Sbjct: 584 VNWKWGKEQTEAFKRLKEQCASAPTLRL----FDGSKEVHIETDASDMAIGACLTQTHDG 639 Query: 68702 KGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV-HFAVFTNHRSLQYIFN 68878 K VAY SR++ E+ Y IHD EL+ +V A++ W Y+ G + ++H++L Y Sbjct: 640 KRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWRVYVEGPPKLTILSDHKNLTYFTT 699 Query: 68879 QRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKA 68998 ++L R+ W ELL Y I Y PG N ADALS ++ Sbjct: 700 TKELTRRQARWSELLGQYKFEIKYTPGTENGPADALSRRS 739 Score = 92.4 bits (226), Expect(2) = 1e-017 Identities = 48/146 (32%), Positives = 81/146 (54%), Gaps = 5/146 (3%) Frame = +1 Query: 69517 IAVDIVVELSRTLGK-----FDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRL 69681 + +D + +L R+ + +D+I V+V+RLTK AHF+P Y ++L + + ++R Sbjct: 871 VTMDFITKLPRSKDRVTGQAYDMILVMVDRLTKYAHFIPASEIYTAEQLGYLVLDRLIRY 930 Query: 69682 HGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACV 69861 HG I+DR F S++W ++ +G + LST +HP+TD Q+E Q LE L + Sbjct: 931 HGFPEVFITDRDKLFTSNYWKTLMGTIGIKHKLSTAYHPETDGQTERTNQTLEQYLRHYI 990 Query: 69862 IDFGNHWDQFLPLVEFAYNNSYHLSFEMAPF 69954 ++W LP+ + A NN + PF Sbjct: 991 NYAQDNWVSLLPMAQIALNNHKSETTSTTPF 1021 Score = 78.8 bits (191), Expect(2) = 5e-060 Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%) Frame = +1 Query: 57322 DVSYSGLGAVLM*----ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYGV 57489 D S +GA L +R+ + Y SR++ E NY HD +L A+V A++ WR Y+ G Sbjct: 623 DASDMAIGACLTQTHDGKRHPVAYYSRKMTTAEQNYDIHDKELLAIVAAMQHWRVYVEGP 682 Query: 57490 -KCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 K + +DH++L Y T K+L R+ RW ELL I Y G N ADALSR+ Sbjct: 683 PKLTILSDHKNLTYFTTTKELTRRQARWSELLGQYKFEIKYTPGTENGPADALSRR 738 Score = 71.4 bits (172), Expect(3) = 1e-043 Identities = 37/102 (36%), Positives = 63/102 (61%) Frame = +2 Query: 67739 VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLL 67918 +P D I++ G +P + P Y+++ EL+ +++ L++ L K +IR S SS G P + Sbjct: 303 LPKHQPWDHKINIQPGKEPPWGPLYQMSEKELQTLREWLKEKLAKGWIRRSTSSAGTPCM 362 Query: 67919 FVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGA 68044 FV + + + + DYR+LN+ITI N YP+P I++ D L G+ Sbjct: 363 FVPKANGKLRLVQDYRKLNEITIKNRYPLPNIEEAQDRLTGS 404 Score = 61.3 bits (146), Expect(3) = 1e-043 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 ++KIDLR ++ +++ E + KTAF+TRYG YEFLVM LTNA A+ DL+N R Sbjct: 407 YTKIDLRDAFYAIRMAEGEEWKTAFRTRYGLYEFLVMPMGLTNAPASCQDLVNETLRDLL 466 Query: 68230 XX-XXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 +EH ++ VF L + T KCE Sbjct: 467 DVCVVAYMDDILVYTKGSLQEHTKQVQDVFERLTKSGFKTAPEKCE 512 Score = 26.6 bits (57), Expect(2) = 1e-017 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 69392 RMKRDIVDFVSRCLNCQQVK-HEHQKPGGVTLRIP 69493 +M+ ++ ++ +C++CQQ K H K G + R P Sbjct: 829 QMRLKVLRYIKKCVHCQQNKAARHAKYGHLQFRTP 863 >gb|AAD36943.1|AF069441_3 (AF069441) putative polyprotein [Arabidopsis thaliana] Length = 778 Score = 236 bits (597), Expect = 3e-059 Identities = 142/395 (35%), Positives = 207/395 (51%), Gaps = 6/395 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + +E ++F V + + ++G G V I TL +VRYI + + Sbjct: 208 HMTHKREWLEDFDEEAGCSVRMGNKTISRVKGVGTVRIANDNGLTVTLQNVRYISDMDRI 267 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMD---VVAESVSG 5880 +S+G F+ G ++ G V+ G TLY G D VA++ Sbjct: 268 FLSLGTFEKAGRKFESENDMLRVNAGEQVLLEGRRYDTLYILHGKPATDESLAVAKANDD 327 Query: 5879 SCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVL 5700 LWH RL HMS K M +LV KG L+ K + CE C+ GK K++ F + K Sbjct: 328 IVLWHRRLCHMSQKNMSLLVKKGFLDKKKVSMLDTCEDCIYGKAKKIGFNFAQHDT-KEK 386 Query: 5699 LKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 L+ H D+WG P+ +LG +++++FI D +RKV VYFLK + F F W + VENQ Sbjct: 387 LEYVHYDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQ 446 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 S +VK LR+DNG E+ F FC +GI+ R P +QNG+ ERMN+ + E RSM Sbjct: 447 SGNRVKTLRTDNGLEFCNRMFDGFCEERGIQRHRTCPYTPQQNGVVERMNRTIMERVRSM 506 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 + +PK FWA T LIN+ P F+ ++ W K YS+LR +GC T+V Sbjct: 507 LCDSRLPKRFWAEATHTAVLLINKTPCSANNFEFPDKRWSGKAPIYSYLRRYGCVTFVQT 566 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFW--DDKNRKILR 5046 D KLN++A K LIGY S + GY+ W +++N ++R Sbjct: 567 DD---GKLNLRAKKGVLIGYPSGVKGYKVWLIEERNSHLVR 604 Score = 120 bits (298), Expect(2) = 5e-028 Identities = 63/128 (49%), Positives = 87/128 (67%) Frame = -2 Query: 4533 VKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTR 4354 VK SIRILL IVA +N+ LEQ+D +T F HG+L ++IYM P+GF KE+ VC L + Sbjct: 633 VKHVSIRILLSIVAQKNLELEQLDVETAFFHGELKEKIYMMPPEGFESLFKENEVCLLNK 692 Query: 4353 SLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 SLYGLKQAPRQW +KFD +MT+ F +++ D C S ++LLLY+ DML+ ++M Sbjct: 693 SLYGLKQAPRQWNEKFDHYMTEIGFKRSDYDSC--------STMYLLLYVYDMLVAANNM 744 Query: 4173 RENNNLDK 4150 + + L K Sbjct: 745 QAIDALKK 752 Score = 78.0 bits (189), Expect(3) = 2e-021 Identities = 43/124 (34%), Positives = 65/124 (51%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VER ++ ++E R++L S+LP R+W E T LIN+ S + + + Sbjct: 484 YTPQQNGVVERMNRTIMERVRSMLCDSRLPKRFWAEATHTAVLLINKTPCSANNFEFPDK 543 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P YSYL+ +GC+ F + + K R + +GYP GYKV + H Sbjct: 544 RWSGKAPIYSYLRRYGCVTF--VQTDDGKLNLRAKKGVLIGYPSGVKGYKVWLIEERNSH 601 Query: 65343 VSRD 65354 + RD Sbjct: 602 LVRD 605 Score = 65.6 bits (157), Expect = 1e-007 Identities = 59/226 (26%), Positives = 95/226 (41%), Gaps = 6/226 (2%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEH----SI 88399 + +W MD+ CS HMT + +E ++++ ++ Sbjct: 196 EDEWIMDTGCSYHMTHKREWLEDFDEEAGCSVRMGNKTISRVKGVGTVRIANDNGLTVTL 255 Query: 88398 DKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLI-GKRDKHIYTVDTS 88222 V Y+ + LS+ K F S +++ +N + VL+ G+R +Y + Sbjct: 256 QNVRYISDMDRIFLSLGTFEKAGRK--FESEN-DMLRVNAGEQVLLEGRRYDTLYILHGK 312 Query: 88221 TIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTL 88042 D+ L ++ D +LWH+RL H SQ ++ L+ K L K K CE C Sbjct: 313 PATDESLA-VAKANDDIVLWHRRLCHMSQKNMSLLVKKGF---LDKKKVSMLDTCEDCIY 368 Query: 88041 GK*IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTR 87889 GK K F Q + LE +H DL G P + G Y +DD+TR Sbjct: 369 GKAKKIGFNFAQHDTKE-KLEYVHYDLWGAPTMPMALGNCQYFISFIDDHTR 419 Score = 55.0 bits (130), Expect = 2e-004 Identities = 28/88 (31%), Positives = 51/88 (57%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 ++ +MSEN S+ +I+EF IV+ L ++++ DE + ++L+ SLP+S+D + + S Sbjct: 91 LYRFKMSENLSMEGNIDEFLHIVADLENLNVLVSDEDQTILLLMSLPKSFDQLKDTLQYS 150 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDS 6531 G L DE+ + SK + V+ S Sbjct: 151 SGKTVLTLDEVTAAIYSKELEFGSVKKS 178 Score = 52.3 bits (123), Expect(3) = 2e-021 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Frame = +1 Query: 64546 RPCVLYQNERNLLYSYILLTKKTF-----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLR 64710 R C + Q +LL L KK C C+ +G+ I F + + + + Sbjct: 334 RLCHMSQKNMSLLVKKGFLDKKKVSMLDTCEDCI-YGKAKKIGFNFAQHDTKEKL-EYVH 391 Query: 64711 LDLW-EPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTI 64887 DLW P + +YF+ +DD +R L K + S++SLV NQ + Sbjct: 392 YDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQSGNRV 451 Query: 64888 KSIRTYNGLEF 64920 K++RT NGLEF Sbjct: 452 KTLRTDNGLEF 462 Score = 33.6 bits (75), Expect(2) = 5e-028 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDR 4074 LS EMKDLG K+ILG++I RDR Sbjct: 754 LSNKLEMKDLGATKKILGIEIIRDR 778 Score = 21.6 bits (44), Expect(3) = 2e-021 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +2 Query: 64502 MSHGNSTDYLWHNRLGHVS 64558 ++ N LWH RL H+S Sbjct: 321 VAKANDDIVLWHRRLCHMS 339 >emb|CAB77906.1| (AL161500) putative polyprotein [Arabidopsis thaliana] Length = 778 Score = 236 bits (597), Expect = 3e-059 Identities = 142/395 (35%), Positives = 207/395 (51%), Gaps = 6/395 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + +E ++F V + + ++G G V I TL +VRYI + + Sbjct: 208 HMTHKREWLEDFDEEAGCSVRMGNKTISRVKGVGTVRIANDNGLTVTLQNVRYISDMDRI 267 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMD---VVAESVSG 5880 +S+G F+ G ++ G V+ G TLY G D VA++ Sbjct: 268 FLSLGTFEKAGRKFESENDMLRVNAGEQVLLEGRRYDTLYILHGKPATDESLAVAKANDD 327 Query: 5879 SCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVL 5700 LWH RL HMS K M +LV KG L+ K + CE C+ GK K++ F + K Sbjct: 328 IVLWHRRLCHMSQKNMSLLVKKGFLDKKKVSMLDTCEDCIYGKAKKIGFNFAQHDT-KEK 386 Query: 5699 LKMTHTDVWG-PSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 L+ H D+WG P+ +LG +++++FI D +RKV VYFLK + F F W + VENQ Sbjct: 387 LEYVHYDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQ 446 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 S +VK LR+DNG E+ F FC +GI+ R P +QNG+ ERMN+ + E RSM Sbjct: 447 SGNRVKTLRTDNGLEFCNRMFDGFCEERGIQRHRTCPYTPQQNGVVERMNRTIMERVRSM 506 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 + +PK FWA T LIN+ P F+ ++ W K YS+LR +GC T+V Sbjct: 507 LCDSRLPKRFWAEATHTAVLLINKTPCSANNFEFPDKRWSGKAPIYSYLRRYGCVTFVQT 566 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFW--DDKNRKILR 5046 D KLN++A K LIGY S + GY+ W +++N ++R Sbjct: 567 DD---GKLNLRAKKGVLIGYPSGVKGYKVWLIEERNSHLVR 604 Score = 120 bits (298), Expect(2) = 5e-028 Identities = 63/128 (49%), Positives = 87/128 (67%) Frame = -2 Query: 4533 VKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTR 4354 VK SIRILL IVA +N+ LEQ+D +T F HG+L ++IYM P+GF KE+ VC L + Sbjct: 633 VKHVSIRILLSIVAQKNLELEQLDVETAFFHGELKEKIYMMPPEGFESLFKENEVCLLNK 692 Query: 4353 SLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 SLYGLKQAPRQW +KFD +MT+ F +++ D C S ++LLLY+ DML+ ++M Sbjct: 693 SLYGLKQAPRQWNEKFDHYMTEIGFKRSDYDSC--------STMYLLLYVYDMLVAANNM 744 Query: 4173 RENNNLDK 4150 + + L K Sbjct: 745 QAIDALKK 752 Score = 78.0 bits (189), Expect(3) = 2e-021 Identities = 43/124 (34%), Positives = 65/124 (51%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VER ++ ++E R++L S+LP R+W E T LIN+ S + + + Sbjct: 484 YTPQQNGVVERMNRTIMERVRSMLCDSRLPKRFWAEATHTAVLLINKTPCSANNFEFPDK 543 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 K P YSYL+ +GC+ F + + K R + +GYP GYKV + H Sbjct: 544 RWSGKAPIYSYLRRYGCVTF--VQTDDGKLNLRAKKGVLIGYPSGVKGYKVWLIEERNSH 601 Query: 65343 VSRD 65354 + RD Sbjct: 602 LVRD 605 Score = 65.6 bits (157), Expect = 1e-007 Identities = 59/226 (26%), Positives = 95/226 (41%), Gaps = 6/226 (2%) Frame = -2 Query: 88566 KQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEH----SI 88399 + +W MD+ CS HMT + +E ++++ ++ Sbjct: 196 EDEWIMDTGCSYHMTHKREWLEDFDEEAGCSVRMGNKTISRVKGVGTVRIANDNGLTVTL 255 Query: 88398 DKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLI-GKRDKHIYTVDTS 88222 V Y+ + LS+ K F S +++ +N + VL+ G+R +Y + Sbjct: 256 QNVRYISDMDRIFLSLGTFEKAGRK--FESEN-DMLRVNAGEQVLLEGRRYDTLYILHGK 312 Query: 88221 TIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTL 88042 D+ L ++ D +LWH+RL H SQ ++ L+ K L K K CE C Sbjct: 313 PATDESLA-VAKANDDIVLWHRRLCHMSQKNMSLLVKKGF---LDKKKVSMLDTCEDCIY 368 Query: 88041 GK*IKSSFKSKQMVSSTCSLELIHMDLCG-PMRVQSRGEKIYVFVLVDDYTR 87889 GK K F Q + LE +H DL G P + G Y +DD+TR Sbjct: 369 GKAKKIGFNFAQHDTKE-KLEYVHYDLWGAPTMPMALGNCQYFISFIDDHTR 419 Score = 55.0 bits (130), Expect = 2e-004 Identities = 28/88 (31%), Positives = 51/88 (57%) Frame = -3 Query: 6794 MFNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSS 6615 ++ +MSEN S+ +I+EF IV+ L ++++ DE + ++L+ SLP+S+D + + S Sbjct: 91 LYRFKMSENLSMEGNIDEFLHIVADLENLNVLVSDEDQTILLLMSLPKSFDQLKDTLQYS 150 Query: 6614 RGSEKLKFDEIRDVVLSKSIRKREVRDS 6531 G L DE+ + SK + V+ S Sbjct: 151 SGKTVLTLDEVTAAIYSKELEFGSVKKS 178 Score = 52.3 bits (123), Expect(3) = 2e-021 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Frame = +1 Query: 64546 RPCVLYQNERNLLYSYILLTKKTF-----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLR 64710 R C + Q +LL L KK C C+ +G+ I F + + + + Sbjct: 334 RLCHMSQKNMSLLVKKGFLDKKKVSMLDTCEDCI-YGKAKKIGFNFAQHDTKEKL-EYVH 391 Query: 64711 LDLW-EPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTI 64887 DLW P + +YF+ +DD +R L K + S++SLV NQ + Sbjct: 392 YDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQSGNRV 451 Query: 64888 KSIRTYNGLEF 64920 K++RT NGLEF Sbjct: 452 KTLRTDNGLEF 462 Score = 33.6 bits (75), Expect(2) = 5e-028 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDR 4074 LS EMKDLG K+ILG++I RDR Sbjct: 754 LSNKLEMKDLGATKKILGIEIIRDR 778 Score = 21.6 bits (44), Expect(3) = 2e-021 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +2 Query: 64502 MSHGNSTDYLWHNRLGHVS 64558 ++ N LWH RL H+S Sbjct: 321 VAKANDDIVLWHRRLCHMS 339 >emb|CAA65152.1| (X95908) orf [Drosophila melanogaster] Length = 1494 Score = 192 bits (482), Expect(2) = 1e-058 Identities = 103/271 (38%), Positives = 160/271 (59%), Gaps = 1/271 (0%) Frame = +2 Query: 56417 RPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQ 56596 +P S P R++ E L+ L E L GFIRPS + + + ++ VKKK RMC+++R+ Sbjct: 715 KPFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRK 774 Query: 56597 LNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYE 56776 LNK+T+K+ Y +P IDD D + VF+K+DL +G+ + + ++ T+F T G YE Sbjct: 775 LNKMTMKDNYPLPLIDDLLDRMNEKTVFTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYE 834 Query: 56777 FLVKSFGLKNAPAAFMGLMNGIFKPYL-ELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 +L FGLKNAP+ F +N IF + E V+V++DDIL+ +++ Sbjct: 835 WLRMPFGLKNAPSVFQRFVNKIFADMIRENKVVVYMDDILLATENINEHLETLKEIFKRL 894 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 L + KCEF +S+ +LG +++KDG+M + IEA+K + P NV V SF+GL Sbjct: 895 VENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLC 954 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGE 57229 SY+RRFI FS +A L ++ K++ PF + E Sbjct: 955 SYFRRFIKDFSRLAKPLHDILKKDKPFKFGSE 986 Score = 129 bits (322), Expect = 5e-027 Identities = 139/571 (24%), Positives = 251/571 (43%), Gaps = 11/571 (1%) Frame = -1 Query: 39325 SEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHR 39146 +EH L+ + + L + +L + KCEF S+ + G +++K+GI + IEAI + Sbjct: 881 NEHLETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPI 940 Query: 39145 PTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELITS 38975 P +V V SF+GL SY+RRF++ FS A L+ +D F + + + F LK+ + Sbjct: 941 PNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILKKDKPFKFGSEEMICFNMLKDKLIQ 1000 Query: 38974 APILTLLVEGGGFTIYCDASGVGVDFVLMK----QGWF-IDYVSRELKVHELNYPTRDLE 38810 +P+L + ++CDAS G VLM+ Q W + + S+ E Y + +LE Sbjct: 1001 SPVLAIYNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDIESKYHSFELE 1060 Query: 38809 LAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHP 38630 IV++L +R YL+ ++ TD SL + +++LN R RW + YD I++ Sbjct: 1061 TLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKKELNPRIARWALEFQGYDFEIVHRA 1120 Query: 38629 GKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQS 38450 G + +LSR + V+ + F N ++ G + Sbjct: 1121 GSRMQHVDALSRCTNIMVIQTN------------SFEDNLVI------------CQGKDT 1156 Query: 38449 SLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSE 38270 L + + + + L +R+ ++ ++ L F VP + Q++ Sbjct: 1157 KLKEIRQLLENTENKLYEMRNGIVYKKTNENRLLF----------YVPIEMEE-QVLYKY 1205 Query: 38269 AHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLS 38090 +E H+G KM + ++Y + ++ + +S CL + ++ G + Sbjct: 1206 HNELG---HVGRDKMIEAIMKNYWFPNLKQKCSTHISNCLKCISFSPKTGKTEGFLHNIP 1262 Query: 38089 ISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFS--VVRLARIYIW 37916 ++ I +D G ++ I VIVD TK ++ + V++ Y Sbjct: 1263 KGNKPFEIIHIDHY-GPVDLARPKKHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYF- 1320 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 R + P IISDRG+ FTS +F E + A PQ + Q E + L M Sbjct: 1321 ---RAYSRPKCIISDRGACFTSGDFDSFLKECNVKHIKIATGSPQANGQVERINRSLGPM 1377 Query: 37735 LHVCV-LEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYG 37613 + + + G D ++ N+ H +I+ + L+G Sbjct: 1378 ISKLIEPDQGLHWDLVLEKVEYTLNNTLHRSIKQYPSIMLFG 1419 Score = 73.0 bits (176), Expect(3) = 6e-034 Identities = 59/206 (28%), Positives = 99/206 (47%), Gaps = 9/206 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +++K+ IM + K IE IK++ P +V + SFLGL Y+RR + + Sbjct: 919 IINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILKKD 978 Query: 68552 LSCGLTSVRLV----FKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 S ++ K + +L Y + L+ DAS G G VLMQK + Sbjct: 979 KPFKFGSEEMICFNMLKDKLIQSPVLAI--YNHKHETELHCDASSSGFGAVLMQKKEDQK 1036 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQR 68884 V++ S++ E KY +LE + +V++L+ + YL+ F + T+ SL +++ Sbjct: 1037 WHPVSFFSKRTTDIESKYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKK 1096 Query: 68885 DLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 +L R W + YD I++ G DALS Sbjct: 1097 ELNPRIARWALEFQGYDFEIVHRAGSRMQHVDALS 1131 Score = 69.9 bits (168), Expect(3) = 6e-034 Identities = 34/91 (37%), Positives = 55/91 (60%) Frame = +2 Query: 67790 KPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQ 67969 KP P R++ E ++ L + L FIR S S + +P++ VK+K + MC+D+R+ Sbjct: 715 KPFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRK 774 Query: 67970 LNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 LNK+T+ + YP+P IDDL D + +V +L Sbjct: 775 LNKMTMKDNYPLPLIDDLLDRMNEKTVFTKL 805 Score = 64.8 bits (155), Expect(2) = 1e-058 Identities = 38/113 (33%), Positives = 66/113 (57%), Gaps = 5/113 (4%) Frame = +1 Query: 57313 VYCDVSYSGLGAVLM*ER-----NVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHY 57477 ++CD S SG GAVLM ++ + +++ S++ E Y + +L+ A+V++L+++R Y Sbjct: 1015 LHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDIESKYHSFELETLAIVYSLRRFRVY 1074 Query: 57478 LYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 L+ ++ TD SL ++K+LN R RW + D I++ G DALSR Sbjct: 1075 LHWRTFKIVTDCNSLILTLSKKELNPRIARWALEFQGYDFEIVHRAGSRMQHVDALSR 1132 Score = 55.4 bits (131), Expect = 1e-004 Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 4/140 (2%) Frame = +1 Query: 69571 IWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSM 69750 I VIV+ TK +TT N K++ + + + R + IISDRG F S + S Sbjct: 1288 ILVIVDAFTKFVRLYATKTT-NTKEVIQS-LNDYFRAYSRPKCIISDRGACFTSGDFDSF 1345 Query: 69751 HKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVI-DFGNHWDQFLPLVEFAYNNSY 69927 KE + T PQ + Q E I + L M+ + D G HWD L VE+ NN+ Sbjct: 1346 LKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPDQGLHWDLVLEKVEYTLNNTL 1405 Query: 69928 HLSFEMAPFEALYG---RGGYMDD 69990 H S + P L+G +G MD+ Sbjct: 1406 HRSIKQYPSIMLFGLQQKGQIMDE 1429 Score = 51.5 bits (121), Expect(3) = 6e-034 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+K+DL++ + + +++E I T+F T G YE+L M F L NA + F +N F Sbjct: 802 FTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFADMI 861 Query: 68230 XXXXXXXXXXXXXXXCRK-EEHEHHLRTVFGILKEKKLYTKFSKCEIWLS 68376 EH L+ +F L E KL + KCE S Sbjct: 862 RENKVVVYMDDILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQS 911 >emb|CAB57796.1| (X03431) ORF2 [Drosophila melanogaster] Length = 1059 Score = 176 bits (442), Expect(2) = 3e-058 Identities = 94/265 (35%), Positives = 153/265 (57%), Gaps = 5/265 (1%) Frame = +2 Query: 56408 TVTRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDES-----F 56572 T PI Y +A E++ Q+QE+L +G IR S +P+ + V KK ++ + Sbjct: 202 THNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKY 261 Query: 56573 RMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF 56752 R+ I+YR+LN++T+ ++Y IP +D+ + F+ IDL G+ Q+++ ++ KTAF Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321 Query: 56753 *TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXX 56932 T+ GHYE+L FGL+NAPA F MN I +P L +V++DDI+I+S S Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381 Query: 56933 XXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDV 57112 NL + KCEF +FLGH+V+ DG+ + K++A+ + PT ++ Sbjct: 382 QLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEI 441 Query: 57113 TSFVGLASYYRRFI*VFSSIALQLTNLTKQ 57202 +F+GL YYR+FI ++ IA +T+ K+ Sbjct: 442 RAFLGLTGYYRKFIPNYADIAKPMTSCLKK 471 Score = 148 bits (369), Expect = 1e-032 Identities = 101/291 (34%), Positives = 156/291 (52%), Gaps = 14/291 (4%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE+L M GL P ++ C + L LL+ + Y ++ S +EH +++ Sbjct: 328 YEYLRMPFGLRNA-PATF---QRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQL 383 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 V L D L + KCEF K F GH+V+ +GI+ +P+K++AI + PT E+ + Sbjct: 384 VFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRA 443 Query: 39118 FVGLVSYYRRFVEGFSTSA----------THLNLQDVSFMWLVKCDMSFLKLKELITSAP 38969 F+GL YYR+F+ ++ A T ++ Q + ++ +F KLK LI P Sbjct: 444 FLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYI------EAFEKLKALIIRDP 497 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFA 38789 IL L F + DAS + + VL + G I ++SR L HELNY + EL IV+A Sbjct: 498 ILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWA 557 Query: 38788 LMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVA 38609 +RHYL G Q+ +DH L+ + ++ ++ RW L +Y I Y GK+N VA Sbjct: 558 TKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVA 617 Query: 38608 YSLSR 38594 +LSR Sbjct: 618 DALSR 622 Score = 123 bits (305), Expect = 5e-025 Identities = 109/399 (27%), Positives = 197/399 (49%), Gaps = 24/399 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYM-----HMCI 67957 PI+ Y + E+++Q+Q++LN+ IR S S + +P V +K + + I Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265 Query: 67958 DYRQLNKITIIN*YPIPRIDDL---------FD*LQGASVSPRLT*DRAIIS*SL----- 68095 DYR+LN+ITI + YPIP +D++ F + A ++ D IS + Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325 Query: 68096 GRRISLRQLFKHVMAITSF**CILN*LTPMQLLWT**IERSDNIWIP-LLLYSLMIY*YN 68272 G LR F A +F C+ N L P+ + + +++ ++++S + + Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPL-------LNKHCLVYLDDIIIFSTSLTEHL 378 Query: 68273 HAVRRNMSII*GPCLGF*RRK-SFTRSFQSVRFGLVSKEDIMVDPKKIETIKDWIRPASV 68449 ++++ + + L K F + + +V+ + I +P K++ I + P Sbjct: 379 NSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKD 438 Query: 68450 IQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*LSCGLTSVRLVFKSSRLN*LLLEF*P 68629 +I +FLGL GYYR+ + +Y + + +L L++ Sbjct: 439 KEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPI 498 Query: 68630 YQ---WRERVLLYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFAL 68800 Q + ++ +L DAS + LG VL Q G +++ SR L HE Y + EL+ +V+A Sbjct: 499 LQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWAT 558 Query: 68801 KIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVAD 68980 K + +YL G F + ++H+ L+++ N ++ + W L +Y I Y GK N VAD Sbjct: 559 KTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVAD 618 Query: 68981 ALS 68989 ALS Sbjct: 619 ALS 621 Score = 78.8 bits (191), Expect(2) = 3e-058 Identities = 45/115 (39%), Positives = 64/115 (55%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F++ D S LGAVL + I++ SR L HE NY + +L A+V+A K +RHYL G Sbjct: 508 FVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLG 567 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 + + +DH+ L ++ K+ + RW L + I Y GK N VADALSR Sbjct: 568 RQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622 Score = 71.0 bits (171), Expect = 2e-009 Identities = 41/108 (37%), Positives = 53/108 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ IDL +HQ+++ EE ISKTAF T+ GHYE+L M F L NA ATF MN R Sbjct: 294 CQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILR 353 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EH + ++ VF L + L + KCE Sbjct: 354 PLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401 >gb|AAD17409.1| (AC006248) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1347 Score = 233 bits (588), Expect = 3e-058 Identities = 185/600 (30%), Positives = 291/600 (47%), Gaps = 40/600 (6%) Frame = -3 Query: 6788 NLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSRG 6609 NL+M +N ++ ++ ++ QL + ++ SLP +D++V+V+ +R Sbjct: 124 NLKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRD 183 Query: 6608 SEKLKFDEIRDVVLSKSIR--KREVRDSSGSALSVN*RRRS--KTKGQINMVDQNQR--- 6450 + L E+ ++ ++ R RE G+ + R S K N V+Q+++ Sbjct: 184 LDALTMSELLGILKAQEARVTAREESTKEGAFYVRSKGRESGFKQDNTNNRVNQDKKWCG 243 Query: 6449 -------IEENLRTDQT*LV*IVEKNDTFGRAIQSQ-------------RRNRIKNLEMT 6330 EE R KND G+ +S R KN E Sbjct: 244 FHKSSKHTEEECREKP--------KNDDHGKNKRSNIKCYKCGKIGHYANECRSKNKERA 295 Query: 6329 MIL*IQQRTLGML*FLV*TA-----LLNHGFWILVH--LSHSSPSKELFKNFKYGNFGKV 6171 + +++ + L + L W++ +H + + F N + Sbjct: 296 HVT-LEEEDVNEDHMLFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPI 354 Query: 6170 YLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGS 5991 + + + GKGD+ + T +R + +V +PG++KNL+SV Q S+GY F Sbjct: 355 RVRNGDIVMTAGKGDITVMTR-HGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKR 413 Query: 5990 WKI--VKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVA 5817 I G ++ + L + + + +V WH RLGH+S K ++ + Sbjct: 414 CIIQDANGKEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQD 473 Query: 5816 KGALEGLKSFDMG--LCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGG 5643 K + GL F + C++C +GKQ R SF K + + L++ HTDV GP S+ G Sbjct: 474 KELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDG 533 Query: 5642 SRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS* 5463 SR+YV F+ D++ WVYFLK S+ FATFKK+KA VE QS+ +K LR Sbjct: 534 SRYYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP---------- 583 Query: 5462 FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAY 5283 FC +GI +P +QNG ER N+ L E ARSM + +P WA V T AY Sbjct: 584 MEVFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAY 643 Query: 5282 LINRGPSVPLGFKILE-EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIG 5106 L NR PS + + E W + SHLR FG YVH+ +KR KL+ KA LIG Sbjct: 644 LQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIG 703 Query: 5105 YGSNLFGYRFWDDKNRKILRHCDVTFDESVMYK-DKEQKV 4989 Y + GYR + ++ K+ DV F E + DK+++V Sbjct: 704 YSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEV 743 Score = 174 bits (437), Expect(2) = 3e-047 Identities = 97/257 (37%), Positives = 153/257 (58%), Gaps = 7/257 (2%) Frame = -2 Query: 4920 DTQPTPTEESEEVTR--EQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVED 4747 D + T ES + + +++L ++ R D + + L+ +E EP+++DEA Sbjct: 792 DQEERETSESPKKYKSMKEILEKAPRMEN--DEAAQGIEACLVANE-EPQTYDEA---RG 845 Query: 4746 SIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKR-RFKAHLVVKG 4570 +WE AM++E++ +EKN TW L D P K + KW+++IKT G + KA LV +G Sbjct: 846 DKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARG 905 Query: 4569 *AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPK 4402 + DY E F+PV + +IR LL A L QMD K+ FL+G+L++E+Y+ QP Sbjct: 906 FSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPP 965 Query: 4401 GFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYV 4222 GFV+ GKE V +L ++LYGLKQAPR WY++ DS+ ++ F ++ D Y KK + Sbjct: 966 GFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVL 1025 Query: 4221 FLLLYLDDMLIEGSSMRENNNLDK 4150 + LY+DD++I G++ N K Sbjct: 1026 IVSLYVDDLIITGNNTHLINTFKK 1049 Score = 120 bits (297), Expect(2) = 1e-049 Identities = 58/126 (46%), Positives = 85/126 (67%), Gaps = 1/126 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG + S KQ +VA STAEAEY+A Q +W+++ DFGLK ++ +PI CDN Sbjct: 1216 LGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNK 1275 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI I +N VQH+RTKH++I++HF+R+ KG I + +C E+Q+AD+ T +L+ FE Sbjct: 1276 SAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVLTKALSVSRFEG 1335 Query: 87111 NRLELGM 87091 R +LG+ Sbjct: 1336 LRRKLGV 1342 Score = 106 bits (262), Expect(2) = 1e-049 Identities = 54/133 (40%), Positives = 83/133 (61%), Gaps = 2/133 (1%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLD-LEGIGST-VEQKLYRGMIGSLLY 87705 G ++ Q+KY +L+ +F M ++K + TP+ P K +EG + YR ++G LLY Sbjct: 1077 GIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTKYRRIVGGLLY 1136 Query: 87704 LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYAD 87525 L ASRPD++++ +R+ ++P H Q KR+L Y+KGTS+ GV + LVGY+D Sbjct: 1137 LCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSD 1196 Query: 87524 VDYVGYLVDRKSTTG 87480 D+ G L D+KSTTG Sbjct: 1197 SDWGGSLEDKKSTTG 1211 Score = 103 bits (254), Expect = 4e-019 Identities = 66/232 (28%), Positives = 110/232 (46%), Gaps = 3/232 (1%) Frame = -2 Query: 88587 QEEVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXX---XXXXXXXXXXXXXXXXXXGR 88417 +E + W +DS C+ HMT + F ++ + R Sbjct: 316 EESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTR 375 Query: 88416 SDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIY 88237 + I V+ V GL NLLS+ Q+ V F+ + + N ++++ I DK + Sbjct: 376 HGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMNIEMTDKS-F 434 Query: 88236 TVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVC 88057 + S++ ++ + E+ WHKRL H S +L ++ K+LV GLP+ K ++ C Sbjct: 435 KIKLSSVEEEAMTANVQTEET---WHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKE-TC 490 Query: 88056 EACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYT 87892 +AC LGK + SF + + LE++H D+CGPM+ QS Y + +DDYT Sbjct: 491 KACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYT 545 Score = 92.8 bits (227), Expect(2) = 2e-018 Identities = 56/215 (26%), Positives = 105/215 (48%) Frame = -1 Query: 90346 LFNGQYYSWWKARMEDFIQAEDYELWVRITKGQLIPTITDSEGNKVPKPADTYNEADYKM 90167 +F+G+ Y +W +M + +LW + +G + + E + + EA Sbjct: 11 IFDGEKYDFWSIKMATIFRTR--KLWSVVEEGVPVEPVQAEETPETARAKTLREEA---- 64 Query: 90166 LGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEA 89987 + + A IL + F+RI++ +S+K+ WD L++ ++G+ QVR K+ SL EYE Sbjct: 65 VTNDTMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYEN 124 Query: 89986 FKMKSGKSLQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDL 89807 KM +++ + + +L G+ T + + K+L P ++ V+ + + +DL Sbjct: 125 LKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDL 184 Query: 89806 TNMTLDELVRNLKTYEMNVDKRGEGNKENFFGLKS 89702 +T+ EL+ LK E V R E KE F ++S Sbjct: 185 DALTMSELLGILKAQEARVTAREESTKEGAFYVRS 219 Score = 86.6 bits (211), Expect(3) = 3e-025 Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 2/130 (1%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNK-NHF 65159 ++ QQNG ERK++ L+E+AR++L + LP + W E + T+ YL NRL + + + Sbjct: 601 YSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPM 660 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 + P S+L++FG +C+ + K K + + I +GY T GY+V +K Sbjct: 661 EKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEK 720 Query: 65337 IHVSRDVSFYEN 65372 + VSRDV F E+ Sbjct: 721 VEVSRDVVFQED 732 Score = 52.3 bits (123), Expect(3) = 3e-025 Identities = 29/100 (29%), Positives = 54/100 (54%) Frame = +1 Query: 64600 LTKKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVD 64779 +TK+T C C + G+ + FP ++ T + +++ D+ P + +G +Y+++ +D Sbjct: 485 VTKET-CKAC-NLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLD 542 Query: 64780 DFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIR 64899 D++ W L KS T T K F +LV Q +IK++R Sbjct: 543 DYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLR 582 Score = 44.1 bits (102), Expect(2) = 3e-047 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%) Frame = -3 Query: 4136 FEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLS 3957 FEM DLG LGM++++D S + LSQE Y K++ +F + ++K +TPL K Sbjct: 1055 FEMTDLGLLNYFLGMEVNQDDSG--IFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRK 1112 Query: 3956 --KEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 + + + + +V L +C+ +RPD +Y Sbjct: 1113 GVEGDDKEFADPTKYRRIVGGLLYLCA-------SRPDVMY 1146 Score = 28.6 bits (62), Expect(2) = 2e-018 Identities = 12/44 (27%), Positives = 18/44 (40%) Frame = -2 Query: 89649 FKKLFKRGLNATKKSPPLKEKNPERSQNGGCFKCGKTDHQIKDC 89518 F K K ++ P + + N C+KCGK H +C Sbjct: 244 FHKSSKHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHYANEC 287 Score = 25.8 bits (55), Expect(3) = 3e-025 Identities = 10/19 (52%), Positives = 12/19 (62%) Frame = +2 Query: 64502 MSHGNSTDYLWHNRLGHVS 64558 M+ T+ WH RLGHVS Sbjct: 446 MTANVQTEETWHKRLGHVS 464 >gb|AAD32906.1|AC007584_4 (AC007584) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 822 Score = 233 bits (588), Expect = 3e-058 Identities = 146/417 (35%), Positives = 213/417 (51%), Gaps = 5/417 (1%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H +P+++LF + + + + EGKGD+ + T +++R + DV +P + K Sbjct: 38 NHMTPNEKLFTKINRDFKVPIRVGNGAVMMSEGKGDIEVMTR-KDKRGIRDVLLVPKLGK 96 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKI---VKGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 NL+SV Q GY I + I N L +VA+ + Sbjct: 97 NLLSVPQMIINGYQVTLKNNYCTIHDSARKKIGEVEMVNKSFHLRWLSNEETAMVAKDEA 156 Query: 5882 GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM--GLCESCVMGKQKRVSFTKTPREP* 5709 LWH RLGH +K+L +K + GL F++ G CESC++ K R F K Sbjct: 157 TE-LWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPKESETRA 215 Query: 5708 KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVE 5529 K L++ H+DV GP SS+ GSR+ +TFI D +R VWVYFLK S+VF TFKK+K VE Sbjct: 216 KHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQTFKKFKNLVE 275 Query: 5528 NQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHAR 5349 N ++ ++K+LR D G EY F+ F GI +QN + ER N+ L E AR Sbjct: 276 NNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRSLVEMAR 335 Query: 5348 SMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYV 5169 +M +P WA V AY NR P+ L K E W + SH++ FG YV Sbjct: 336 AMIKAKDLPLKLWAEAVHVAAYAQNRTPTRTLKNKTPLEAWSDSKPSVSHMKVFGSICYV 395 Query: 5168 HVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKV 4989 H+ EKR K + K+ + +GY S GYR + K KI DV FDE + ++++V Sbjct: 396 HIPDEKRRKWDDKSKRAIFVGYSSQTKGYRVYLLKENKIDISRDVIFDEDSKWDWEKKEV 455 Query: 4988 LE 4983 ++ Sbjct: 456 IK 457 Score = 134 bits (333), Expect(2) = 2e-036 Identities = 67/164 (40%), Positives = 102/164 (61%), Gaps = 5/164 (3%) Frame = -2 Query: 4674 DLPAGKRALLNKWVFRIKT*PDGKR-RFKAHLVVKG*A----TDYAEIFSPVVKLTSIRI 4510 D P G ++ KW+FR+KT +G + KA LV KG DY E F+PV + +IR+ Sbjct: 499 DSPGGSTSV--KWIFRLKTDAEGNVVKHKARLVAKGFTQQHGVDYLETFAPVSRHETIRL 556 Query: 4509 LLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQA 4330 +L++ A L Q+D K+ FL+G L++EIY +QP GF GKE V +L ++LYGLKQA Sbjct: 557 ILVVAAQRKWKLFQLDVKSAFLNGTLEEEIYAEQPLGFEEEGKEDHVLRLHKALYGLKQA 616 Query: 4329 PRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEG 4183 PR WY + D F + F +++ D Y K+ + + +Y+DD+++ G Sbjct: 617 PRAWYSRIDEFFQRENFTRSDNDHALYTKEVLGKLLVVCIYVDDLIVTG 665 Score = 97.5 bits (239), Expect = 3e-017 Identities = 47/128 (36%), Positives = 79/128 (61%) Frame = -3 Query: 87902 MIILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGM 87723 M I+ + G ++ Q+ Y ++LLK+F M+D+K + TP+ P K D E S + K+YR + Sbjct: 696 MEIVQSLEGIFLSQECYARKLLKKFNMEDSKIMSTPLLPQRK-DQEEDESLADSKVYRSL 754 Query: 87722 IGSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFD 87543 +G LLYLT++RP+++F +R+ PK H + KR+L Y+ GT D+G+ + Sbjct: 755 VGGLLYLTSTRPNLMFFASYLSRYLKEPKIKHFKEAKRVLRYINGTIDMGMRFTSTMEPK 814 Query: 87542 LVGYADVD 87519 L+G++D D Sbjct: 815 LIGHSDSD 822 Score = 94.0 bits (230), Expect = 3e-016 Identities = 67/235 (28%), Positives = 104/235 (43%), Gaps = 5/235 (2%) Frame = -2 Query: 88593 IFQEEVRESK--QQWYMDSACSRHMTGNKTLFLSLEEXXXX---XXXXXXXXXXXXXXXX 88429 I ++E++E W +DS C+ HMT N+ LF + Sbjct: 16 IARQEIKEPSGGNTWLIDSGCTNHMTPNEKLFTKINRDFKVPIRVGNGAVMMSEGKGDIE 75 Query: 88428 XXGRSDEHSIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRD 88249 R D+ I V V L NLLS+ Q+ +V ++ + + +K+ + + Sbjct: 76 VMTRKDKRGIRDVLLVPKLGKNLLSVPQMIINGYQVTLKNNYCTIHDSARKKIGEVEMVN 135 Query: 88248 KHIYTVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKE 88069 K + S + + ++ LWHKRL H L L +K++V GLPK +E Sbjct: 136 KSFHLRWLSN----EETAMVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEE 191 Query: 88068 DKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 K CE+C L K + F + + LELIH D+CGPM+ S Y+ +DD TR Sbjct: 192 GK-CESCILSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATR 250 Score = 86.6 bits (211), Expect = 5e-014 Identities = 45/130 (34%), Positives = 72/130 (54%), Gaps = 1/130 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ QQN ER+++ L+E+ARA++ LP + W E + Y NR L NK + Sbjct: 315 YSPQQNEVSERRNRSLVEMARAMIKAKDLPLKLWAEAVHVAAYAQNRTPTRTLKNKTPLE 374 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 + P+ S++KVFG +C+ + K K++ ++ IF+GY T GY+V KI Sbjct: 375 AWSDSKPSVSHMKVFGSICYVHIPDEKRRKWDDKSKRAIFVGYSSQTKGYRVYLLKENKI 434 Query: 65340 HVSRDVSFYEN 65372 +SRDV F E+ Sbjct: 435 DISRDVIFDED 445 Score = 48.4 bits (113), Expect(2) = 2e-036 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Frame = -3 Query: 4154 TRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLA 3975 T + FEM DLG LGM+I + + LSQE Y K+L +F + D+K +TPL Sbjct: 676 TAMKNEFEMSDLGLLNYFLGMEIVQSLEG--IFLSQECYARKLLKKFNMEDSKIMSTPLL 733 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYY--LFSIYSL*PKI 3804 K +E+ + + + +LV L + S TRP+ +++ S Y PKI Sbjct: 734 PQRK-DQEEDESLADSKVYRSLVGGLLYLTS-------TRPNLMFFASYLSRYLKEPKI 784 >dbj|BAB07955.1| (AP002524) putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa] Length = 1302 Score = 198 bits (498), Expect(2) = 2e-057 Identities = 109/254 (42%), Positives = 155/254 (60%), Gaps = 6/254 (2%) Frame = -2 Query: 4917 TQPTPTEESEE-VTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSI 4741 T P TE + E V+ E V R+ R S + + + + P+S EA D+ Sbjct: 745 TPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDAD 804 Query: 4740 KWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*A 4564 W+ A+ EM S+ N TW +T+ P G + + KWVF+ K PDG ++KA LV KG Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864 Query: 4563 T----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGF 4396 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+LD+EIYM QP GF Sbjct: 865 QKEGEDFCDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 924 Query: 4395 VVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFL 4216 VV G+E VCKL +SLYGLKQAP+QW++KFD +T + F E D C Y++ V L Sbjct: 925 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVIL 984 Query: 4215 LLYLDDMLIEGSSMRENNNL 4156 LY+DD+LI G+++ N + Sbjct: 985 CLYVDDILIFGTNLEVINEV 1004 Score = 189 bits (476), Expect = 4e-045 Identities = 123/385 (31%), Positives = 185/385 (47%), Gaps = 8/385 (2%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H LF +++ V + + + G G V +K T L +V+++P I +N Sbjct: 309 HVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRN 368 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC- 5874 L+S + G+ VF + K + +G G L+ D +SV+ C Sbjct: 369 LVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS---LSDFCNKSVNHICG 425 Query: 5873 -------LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPRE 5715 +WH+RL H++ M L + + C SCV KQ R K +E Sbjct: 426 SVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPH-KAAKE 484 Query: 5714 P*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAE 5535 L++ H+D+ + V + GG R+++T I D +R +VY LK + FK +KAE Sbjct: 485 RNLAPLELLHSDLCEMNGVLTNGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAE 544 Query: 5534 VENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEH 5355 VENQ K+KRLRSD GGE+ + F FC GI R P NGI ER N+ L + Sbjct: 545 VENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDL 604 Query: 5354 ARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTT 5175 +M G+PK +W + T ++ NR P+ K E+WI ++ S+LRT+GC Sbjct: 605 VNAMLDTAGLPKAWWGEALLTSNHVSNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLA 663 Query: 5174 YVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 V+V K+ KL K V C +GY + YRF Sbjct: 664 KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRF 696 Score = 79.6 bits (193), Expect(2) = 1e-019 Identities = 50/132 (37%), Positives = 80/132 (59%), Gaps = 1/132 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL- 87702 G + Q YV+++L RF D+K TP P+ L + Q Y +IGSL+YL Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLR-KNKRIARNQLEYSQIIGSLMYLA 1092 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +A+RPDI F+V +RF +NP + H +A++R++ YLKGT +LG+ Y G L GY+D Sbjct: 1093 SATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY-TGYPAVLEGYSDS 1151 Query: 87521 DYVGYLVDRKSTT 87483 +++ + + K+T+ Sbjct: 1152 NWISDVDEIKATS 1164 Score = 78.8 bits (191), Expect(4) = 1e-024 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 8/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ + NG ERK++ L ++ A+L + LP +WGE +LT+ ++ NR+ N +K ++ Sbjct: 586 YSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVSNRVPNR-NKDKTPYE 644 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------- 65318 + + P+ SYL+ +GCL + + K K P+T +FLGY ++ Y+ L Sbjct: 645 IWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVP 704 Query: 65319 DFSTKKIHVSRDVSFYENVFP 65381 D I SRD F+E+ FP Sbjct: 705 DMHVGTIMESRDSIFFESFFP 725 Score = 55.4 bits (131), Expect(4) = 1e-024 Identities = 30/85 (35%), Positives = 48/85 (56%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +LL DL E VLT+ G +YF+ ++DD +R + LL K L K + + V NQ Sbjct: 491 ELLHSDLCEMNGVLTNGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLD 550 Query: 64879 VTIKSIRTYNGLEFISHETNIYLKK 64953 IK +R+ G EF S+E +++ ++ Sbjct: 551 RKIKRLRSDRGGEFFSNEFDLFCEE 575 Score = 53.9 bits (127), Expect(2) = 2e-057 Identities = 39/100 (39%), Positives = 52/100 (52%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS F+MKDLG A IL +K+ R + TL Q Y+EK+L+RF D+KP TP Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITL--LQSHYVEKILNRFGYIDSKPSPTPYDPS 1065 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + RN + Y+ I SL+ + TRPD Sbjct: 1066 LLLRKNKR----IARNQL---EYSQIIGSLMYLASATRPD 1098 Score = 53.9 bits (127), Expect = 3e-004 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%) Frame = -2 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDK--HIYTVD 88228 + V +V + NL+S S+L K++F S V V ++ IGK + ++ Sbjct: 356 LKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVV----SKHGYFIGKGYECGGLFRFS 411 Query: 88227 TSTIYDKKL--VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCE 88054 S +K + +C SV + + +WH RL H + +++L + L+ PK + C Sbjct: 412 LSDFCNKSVNHICGSV-DDEANVWHSRLCHINFGLMSRLSSMCLI---PKFSIVKGSKCH 467 Query: 88053 ACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 +C K + K+ + + LEL+H DLC V + G K Y L+DD TR Sbjct: 468 SCVQSKQPRKPHKAAKE-RNLAPLELLHSDLCEMNGVLTNGGKRYFMTLIDDATR 521 Score = 46.1 bits (107), Expect(2) = 1e-019 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W++ L D + + VP CD Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKLVPAILMNCD 1229 Query: 87297 NTSAINIVKNLVQH-KRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N + I V + + K ++HV R +R G I++++ +AD FT L+R Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTVRNLADPFTKGLSRNV 1289 Query: 87120 FERNRLEL 87097 + E+ Sbjct: 1290 IDNASKEM 1297 Score = 26.6 bits (57), Expect(4) = 1e-024 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 +WH+RL H++F M +SS+ + FS K C C Sbjct: 433 VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSC 469 Score = 21.2 bits (43), Expect(4) = 1e-024 Identities = 7/15 (46%), Positives = 12/15 (79%) Frame = +2 Query: 64949 KKKGKIHQRSCPYAP 64993 ++ G IH+R+ PY+P Sbjct: 574 EEHGIIHERTPPYSP 588 >emb|CAA39913.1| (X56562) putative coding sequence [Agrobacterium tumefaciens] Length = 275 Score = 228 bits (576), Expect = 8e-057 Identities = 118/242 (48%), Positives = 156/242 (63%), Gaps = 1/242 (0%) Frame = +1 Query: 20500 DDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKP 20679 +D ++L I ++ + PTYGYRR+ ALL R+ P +NAKRV+RIM +A+LLE+ Sbjct: 33 EDAELLPAIRRLVDQRPTYGYRRIAALLNRERRAADQPVVNAKRVHRIMGNHAMLLEKHT 92 Query: 20680 AVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW-AVTTGG 20856 AV R H G+V V SN RWCSDG EF C NGE +R+ F +D DRE + W AV G Sbjct: 93 AVRKG-RLHDGKVMVMRSNLRWCSDGLEFACWNGEVIRLAFIIDAFDREIIAWTAVANAG 151 Query: 20857 FNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRS 21036 + V+D+ML AVE+RF +E L+DNGS Y A +TR FA+ L L P T V S Sbjct: 152 ISGSDVRDMMLEAVEKRFHATRAPHAIEHLSDNGSAYTARDTRLFAQALNLTPCFTPVAS 211 Query: 21037 PESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLR 21216 P+SNG++E+FVKT+KRDYI I PD TA + + E YNE HPHSAL SPR+++R Sbjct: 212 PQSNGMSEAFVKTLKRDYIRISALPDAQTALRLIDGWIEDYNEIHPHSALKMASPRQFIR 271 Query: 21217 QRA 21225 ++ Sbjct: 272 AKS 274 >gb|AAF48015.1| (AE003485) CG2485 gene product [Drosophila melanogaster] Length = 1062 Score = 172 bits (431), Expect(2) = 9e-057 Identities = 94/260 (36%), Positives = 147/260 (56%), Gaps = 5/260 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKK-----DESFRMCI 56584 P+ P+R +PAE E+ Q+ +LL + IR S +PW A V V KK + +R+ + Sbjct: 186 PVHKRPFRYSPAEKTEITDQINKLLEQDIIRHSHSPWSAPVFLVPKKLDASNKKKWRLVV 245 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 ++RQLN T+K++Y +P I++ D + A FS +DL SGY Q+++ + KTAF Sbjct: 246 DFRQLNDKTIKDRYPMPNINEILDKLGRAQYFSALDLASGYHQIEVEPKDRSKTAFSAVG 305 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GH+EF+ FGL NAPA F +M+ + + F ++++DDI+++S S + Sbjct: 306 GHFEFIRMPFGLSNAPATFQRVMDNVLAEFNGKFCLIYLDDIIVFSTSLQEHINHLSSIF 365 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 NL + K EF + +LGH+V++ GV + KIE +K + P ++ SF+ Sbjct: 366 KKLTLANLKLQPDKSEFLKKELEYLGHIVTEKGVKPNPKKIETIKAFPMPKTRKEIKSFL 425 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTK 57199 GL YYRRFI F+ I LT K Sbjct: 426 GLLGYYRRFIRDFAKITKPLTQQLK 450 Score = 126 bits (313), Expect(2) = 2e-027 Identities = 132/492 (26%), Positives = 228/492 (45%), Gaps = 36/492 (7%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S EH +L + + L L + K EF K + + GH+V+++G++ +P KIE I + Sbjct: 353 SLQEHINHLSSIFKKLTLANLKLQPDKSEFLKKELEYLGHIVTEKGVKPNPKKIETIKAF 412 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKL----KEL 38984 P + E+ SF+GL+ YYRRF+ F+ L Q + V D +++K K L Sbjct: 413 PMPKTRKEIKSFLGLLGYYRRFIRDFAKITKPLT-QQLKGKSDVTIDDNYIKTFEFCKTL 471 Query: 38983 ITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWF-----IDYVSRELKVHELNYPTR 38819 + + PIL F + DAS V + VL QG I Y SR L E +Y T Sbjct: 472 LCNDPILQYPDFTKSFILTTDASNVAIGAVL-SQGTVGNDRPIAYASRTLSESETHYATI 530 Query: 38818 DLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSIL 38639 EL IV+A+ +R YL+G ++ TDH L + ++ NS RW L +YD ++ Sbjct: 531 KKELLAIVWAVKYFRPYLFGNKFLLVTDHKPLVWLKNLKEPNSMLVRWKLQLLEYDCEVI 590 Query: 38638 YHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG 38459 Y G +N+VA +LSR +V RP+ D + + ++ F + +L Sbjct: 591 YKKGSQNVVADALSR-----IVVELNTNEARPITSDTEILTSNR-PINEFAIQIILKIAD 644 Query: 38458 VQSSLYD---RNRGWQ------FED*ALLSLRDQVLAGDGDQA--TLD--FDGVLKFSGR 38318 + L + +N+ + F+D ++ + L + A T D F+ V K Sbjct: 645 CANDLLETPFKNKLRRIISRPLFDDQTMIDVLKTALRSNKTHAIYTTDTIFESVQKIYAA 704 Query: 38317 ISVPTVGDSIQLILSEAHEFR-----------YSI---HLGTAKMYRDLRQHYLWSGMR* 38180 P+ I + E R Y I H G + +++ + ++ Sbjct: 705 FFAPSKSYKIIRCTTYLDELRTPEEQVEYISDYHIKNNHRGIDETVSHIKRQIYFPCLKE 764 Query: 38179 DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVI 38000 ++ +++C Q +K + F+ D + +D S +I I Sbjct: 765 RVSQLINKCDICQTLKYDRQPQKPIFQLTETPNKPLDIVHIDLY------SINNKTILTI 818 Query: 37999 VDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQF 37856 +D+ +K A + S S+ + + + HG+P +I+ D+G +F Sbjct: 819 IDKFSKFAEGYTIPSRDSINITKHMMFF--FKTHGIPKTIVCDQGPEF 864 Score = 101 bits (249), Expect(3) = 2e-043 Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 9/235 (3%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 +V+++ + +PKKIETIK + P + +I SFLGL GYYRR + I+ P Sbjct: 393 IVTEKGVKPNPKKIETIKAFPMPKTRKEIKSFLGLLGYYRRFIRDFAKITKPLTQQLKGK 452 Query: 68537 XXXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ----K 68704 + K+ N +L++ + + +L DAS + +G VL Q Sbjct: 453 SDVT-IDDNYIKTFEFCKTLLCNDPILQYPDFT--KSFILTTDASNVAIGAVLSQGTVGN 509 Query: 68705 GKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQR 68884 + +AYASR L E Y EL+ +V+A+K + YL+G F + T+H+ L ++ N + Sbjct: 510 DRPIAYASRTLSESETHYATIKKELLAIVWAVKYFRPYLFGNKFLLVTDHKPLVWLKNLK 569 Query: 68885 DLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQL 69064 + W L +YD ++Y G NVVADALS V + + RP+ D ++ Sbjct: 570 EPNSMLVRWKLQLLEYDCEVIYKKGSQNVVADALSRIVVELNT-----NEARPITSDTEI 624 Query: 69065 LSNS 69076 L+++ Sbjct: 625 LTSN 628 Score = 78.0 bits (189), Expect(2) = 9e-057 Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 4/144 (2%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVL----M*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWR 57471 +FI+ D S +GAVL + I YASR L E +Y T +L A+V+A+K +R Sbjct: 486 SFILTTDASNVAIGAVLSQGTVGNDRPIAYASRTLSESETHYATIKKELLAIVWAVKYFR 545 Query: 57472 HYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 YL+G K + TDH+ L ++ K+ N RW L + D ++Y G NVVADALSR Sbjct: 546 PYLFGNKFLLVTDHKPLVWLKNLKEPNSMLVRWKLQLLEYDCEVIYKKGSQNVVADALSR 605 Query: 57652 KVGSMGSLAHSQVSRRPLAREVQTLAND 57735 V + + RP+ + + L ++ Sbjct: 606 IVVELNT-----NEARPITSDTEILTSN 628 Score = 62.8 bits (150), Expect(3) = 2e-043 Identities = 32/79 (40%), Positives = 49/79 (61%), Gaps = 5/79 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRK-----DEYMHMCI 67957 P+ P+R +PAE E+ DQ+ LL + IR S S W AP+ V +K + + + Sbjct: 186 PVHKRPFRYSPAEKTEITDQINKLLEQDIIRHSHSPWSAPVFLVPKKLDASNKKKWRLVV 245 Query: 67958 DYRQLNKITIIN*YPIPRIDDLFD 68029 D+RQLN TI + YP+P I+++ D Sbjct: 246 DFRQLNDKTIKDRYPMPNINEILD 269 Score = 62.1 bits (148), Expect(3) = 2e-043 Identities = 39/116 (33%), Positives = 58/116 (49%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 FS +DL S YHQ+++ +D SKTAF GH+EF+ M F L+NA ATF +M+ ++ Sbjct: 277 FSALDLASGYHQIEVEPKDRSKTAFSAVGGHFEFIRMPFGLSNAPATFQRVMDNVLAEFN 336 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 +EH +HL ++F L L + K E +L + Y G Sbjct: 337 GKFCLIYLDDIIVFSTSLQEHINHLSSIFKKLTLANLKLQPDKSE-FLKKELEYLG 391 Score = 25.4 bits (54), Expect(2) = 2e-027 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+ F +M + F +I++DDI+V L+ Sbjct: 315 FGLSNAPATFQRVMDNVLAEFNGKFCLIYLDDIIVFSTSLQ 355 >dbj|BAA88206.1| (AP000837) Similar to Oryza australiensis retrotransposon RIRE1 (D85597) [Oryza sativa] Length = 1302 Score = 196 bits (492), Expect(2) = 1e-056 Identities = 108/254 (42%), Positives = 154/254 (60%), Gaps = 6/254 (2%) Frame = -2 Query: 4917 TQPTPTEESEE-VTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSI 4741 T P TE + E V+ E V R+ R S + + + + P+S EA D+ Sbjct: 745 TPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDAD 804 Query: 4740 KWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*A 4564 W+ A+ EM S+ N TW + + P G + + KWVF+ K PDG ++KA LV KG Sbjct: 805 YWKEAVRSEMDSIIANGTWEVIERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864 Query: 4563 T----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGF 4396 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+LD+EIYM QP GF Sbjct: 865 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 924 Query: 4395 VVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFL 4216 VV G+E VCKL +SLYGLKQAP+QW++KFD +T + F E D C Y++ V L Sbjct: 925 VVEGQERKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVIL 984 Query: 4215 LLYLDDMLIEGSSMRENNNL 4156 LY+DD+LI G+++ N + Sbjct: 985 CLYVDDILIFGTNLEVINEV 1004 Score = 191 bits (481), Expect = 1e-045 Identities = 123/385 (31%), Positives = 185/385 (47%), Gaps = 8/385 (2%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H LF +++ V + + + G G V +K T L +V+++P I +N Sbjct: 309 HVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRN 368 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC- 5874 L+S + G+ VF + K + +G G L+ D +SV+ C Sbjct: 369 LVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS---LSDFCNKSVNHICG 425 Query: 5873 -------LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPRE 5715 +WH+RL H++ M L + + C SCV KQ R K E Sbjct: 426 SVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPH-KAAEE 484 Query: 5714 P*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAE 5535 L++ H+D+ + V + GG R+++TFI D +R +VY LK + FK +KAE Sbjct: 485 RNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAE 544 Query: 5534 VENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEH 5355 VENQ K+KRLRSD GGE+ + F FC GI P NGI ER N+ L + Sbjct: 545 VENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIYEMTPPYSPESNGIAERKNRTLTDL 604 Query: 5354 ARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTT 5175 +M G+PK +W + T +++NR P+ K E+WI ++ S+LRT+GC Sbjct: 605 VNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLA 663 Query: 5174 YVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 V+V K+ KL K V C +GY + YRF Sbjct: 664 KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRF 696 Score = 81.9 bits (199), Expect(2) = 1e-021 Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL- 87702 G + Q YV+++L RF D+K TP P+ L + Q Y +IGSL+YL Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLR-KNKRIARNQLEYSQIIGSLMYLA 1092 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +A+RPDI F+V +RF +NP + H +A++R++ YLKGT +LG+ Y G L GY+D Sbjct: 1093 SATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY-TGYPAVLEGYSDS 1151 Query: 87521 DYVGYLVDRKSTTG 87480 +++ + + K+T+G Sbjct: 1152 NWISDVDEIKATSG 1165 Score = 81.1 bits (197), Expect(3) = 2e-024 Identities = 45/133 (33%), Positives = 78/133 (57%), Gaps = 8/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ + NG ERK++ L ++ A+L + LP +WGE +LT+ +++NR+ N +K ++ Sbjct: 586 YSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR-NKDKTPYE 644 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------- 65318 + + P+ SYL+ +GCL + + K K P+T +FLGY ++ Y+ L Sbjct: 645 IWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVP 704 Query: 65319 DFSTKKIHVSRDVSFYENVFP 65381 D I SRD F+E+ FP Sbjct: 705 DMHVGTIMESRDAIFFESFFP 725 Score = 53.9 bits (127), Expect(2) = 1e-056 Identities = 39/100 (39%), Positives = 52/100 (52%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS F+MKDLG A IL +K+ R + TL Q Y+EK+L+RF D+KP TP Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITL--LQSHYVEKILNRFGYIDSKPSPTPYDPS 1065 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + RN + Y+ I SL+ + TRPD Sbjct: 1066 LLLRKNKR----IARNQL---EYSQIIGSLMYLASATRPD 1098 Score = 53.9 bits (127), Expect(3) = 2e-024 Identities = 30/85 (35%), Positives = 46/85 (53%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +LL DL E VLT G +YF+ +DD +R + LL K L K + + V NQ Sbjct: 491 ELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLD 550 Query: 64879 VTIKSIRTYNGLEFISHETNIYLKK 64953 IK +R+ G EF S+E +++ ++ Sbjct: 551 RKIKRLRSDRGGEFFSNEFDLFCEE 575 Score = 53.5 bits (126), Expect = 5e-004 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%) Frame = -2 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDK--HIYTVD 88228 + V +V + NL+S S+L K++F S V V ++ IGK + ++ Sbjct: 356 LKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVV----SKHGYFIGKGYECGGLFRFS 411 Query: 88227 TSTIYDKKL--VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCE 88054 S +K + +C SV + + +WH RL H + +++L + L+ PK + C Sbjct: 412 LSDFCNKSVNHICGSV-DDEANVWHSRLCHINFGLMSRLSSMCLI---PKFSIVKGSKCH 467 Query: 88053 ACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 +C K + K+ + + LEL+H DLC V ++G K Y +DD TR Sbjct: 468 SCVQSKQPRKPHKAAEE-RNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATR 521 Score = 50.8 bits (119), Expect(2) = 1e-021 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W++ L D + + VP CD Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229 Query: 87297 NTSAINIVKNLVQH-KRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N + I V + + K ++HV R +R G I++++ +AD FT L+R Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289 Query: 87120 FERNRLELGMMKI 87082 + E+G+ I Sbjct: 1290 IDNASKEMGLRPI 1302 Score = 26.6 bits (57), Expect(3) = 2e-024 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 +WH+RL H++F M +SS+ + FS K C C Sbjct: 433 VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSC 469 >dbj|BAA88170.1| (AP000836) Similar to Oryza australiensis retrotransposon RIRE1 (D85597) [Oryza sativa] Length = 1302 Score = 196 bits (492), Expect(2) = 1e-056 Identities = 108/254 (42%), Positives = 154/254 (60%), Gaps = 6/254 (2%) Frame = -2 Query: 4917 TQPTPTEESEE-VTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSI 4741 T P TE + E V+ E V R+ R S + + + + P+S EA D+ Sbjct: 745 TPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDAD 804 Query: 4740 KWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*A 4564 W+ A+ EM S+ N TW + + P G + + KWVF+ K PDG ++KA LV KG Sbjct: 805 YWKEAVRSEMDSIIANGTWEVIERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864 Query: 4563 T----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGF 4396 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+LD+EIYM QP GF Sbjct: 865 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 924 Query: 4395 VVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFL 4216 VV G+E VCKL +SLYGLKQAP+QW++KFD +T + F E D C Y++ V L Sbjct: 925 VVEGQERKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVIL 984 Query: 4215 LLYLDDMLIEGSSMRENNNL 4156 LY+DD+LI G+++ N + Sbjct: 985 CLYVDDILIFGTNLEVINEV 1004 Score = 191 bits (481), Expect = 1e-045 Identities = 123/385 (31%), Positives = 185/385 (47%), Gaps = 8/385 (2%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H LF +++ V + + + G G V +K T L +V+++P I +N Sbjct: 309 HVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRN 368 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC- 5874 L+S + G+ VF + K + +G G L+ D +SV+ C Sbjct: 369 LVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS---LSDFCNKSVNHICG 425 Query: 5873 -------LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPRE 5715 +WH+RL H++ M L + + C SCV KQ R K E Sbjct: 426 SVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPH-KAAEE 484 Query: 5714 P*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAE 5535 L++ H+D+ + V + GG R+++TFI D +R +VY LK + FK +KAE Sbjct: 485 RNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAE 544 Query: 5534 VENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEH 5355 VENQ K+KRLRSD GGE+ + F FC GI P NGI ER N+ L + Sbjct: 545 VENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIYEMTPPYSPESNGIAERKNRTLTDL 604 Query: 5354 ARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTT 5175 +M G+PK +W + T +++NR P+ K E+WI ++ S+LRT+GC Sbjct: 605 VNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLA 663 Query: 5174 YVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 V+V K+ KL K V C +GY + YRF Sbjct: 664 KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRF 696 Score = 81.9 bits (199), Expect(2) = 1e-021 Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL- 87702 G + Q YV+++L RF D+K TP P+ L + Q Y +IGSL+YL Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLR-KNKRIARNQLEYSQIIGSLMYLA 1092 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +A+RPDI F+V +RF +NP + H +A++R++ YLKGT +LG+ Y G L GY+D Sbjct: 1093 SATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY-TGYPAVLEGYSDS 1151 Query: 87521 DYVGYLVDRKSTTG 87480 +++ + + K+T+G Sbjct: 1152 NWISDVDEIKATSG 1165 Score = 81.1 bits (197), Expect(3) = 2e-024 Identities = 45/133 (33%), Positives = 78/133 (57%), Gaps = 8/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ + NG ERK++ L ++ A+L + LP +WGE +LT+ +++NR+ N +K ++ Sbjct: 586 YSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR-NKDKTPYE 644 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------- 65318 + + P+ SYL+ +GCL + + K K P+T +FLGY ++ Y+ L Sbjct: 645 IWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVP 704 Query: 65319 DFSTKKIHVSRDVSFYENVFP 65381 D I SRD F+E+ FP Sbjct: 705 DMHVGTIMESRDAIFFESFFP 725 Score = 53.9 bits (127), Expect(2) = 1e-056 Identities = 39/100 (39%), Positives = 52/100 (52%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS F+MKDLG A IL +K+ R + TL Q Y+EK+L+RF D+KP TP Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITL--LQSHYVEKILNRFGYIDSKPSPTPYDPS 1065 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + RN + Y+ I SL+ + TRPD Sbjct: 1066 LLLRKNKR----IARNQL---EYSQIIGSLMYLASATRPD 1098 Score = 53.9 bits (127), Expect(3) = 2e-024 Identities = 30/85 (35%), Positives = 46/85 (53%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +LL DL E VLT G +YF+ +DD +R + LL K L K + + V NQ Sbjct: 491 ELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLD 550 Query: 64879 VTIKSIRTYNGLEFISHETNIYLKK 64953 IK +R+ G EF S+E +++ ++ Sbjct: 551 RKIKRLRSDRGGEFFSNEFDLFCEE 575 Score = 53.5 bits (126), Expect = 5e-004 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%) Frame = -2 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDK--HIYTVD 88228 + V +V + NL+S S+L K++F S V V ++ IGK + ++ Sbjct: 356 LKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVV----SKHGYFIGKGYECGGLFRFS 411 Query: 88227 TSTIYDKKL--VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCE 88054 S +K + +C SV + + +WH RL H + +++L + L+ PK + C Sbjct: 412 LSDFCNKSVNHICGSV-DDEANVWHSRLCHINFGLMSRLSSMCLI---PKFSIVKGSKCH 467 Query: 88053 ACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 +C K + K+ + + LEL+H DLC V ++G K Y +DD TR Sbjct: 468 SCVQSKQPRKPHKAAEE-RNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATR 521 Score = 50.8 bits (119), Expect(2) = 1e-021 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W++ L D + + VP CD Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229 Query: 87297 NTSAINIVKNLVQH-KRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N + I V + + K ++HV R +R G I++++ +AD FT L+R Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289 Query: 87120 FERNRLELGMMKI 87082 + E+G+ I Sbjct: 1290 IDNASKEMGLRPI 1302 Score = 26.6 bits (57), Expect(3) = 2e-024 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 +WH+RL H++F M +SS+ + FS K C C Sbjct: 433 VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSC 469 >emb|CAA08807.1| (AJ009736) Pol protein [Drosophila melanogaster] Length = 1150 Score = 161 bits (404), Expect(2) = 3e-056 Identities = 87/273 (31%), Positives = 152/273 (54%), Gaps = 5/273 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDES-----FRMCI 56584 P+ PY+ + +E+ Q++E++ +G +R S +P+ + + V KK ++ FR+ + Sbjct: 280 PVYRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVV 339 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 +YR LN++T+ +K+ IP +D+ D + F+ IDL G+ Q+++ ++ KTAF T+ Sbjct: 340 DYRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKH 399 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GHYE+ FGLKNAPA F MN + + + +V++DDI++YS + Sbjct: 400 GHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYKDCLVYLDDIIVYSTPLEEHILSLKKVF 459 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 NL + KCEF FLGH+V+ +G+ + +K +A+ + P + SF+ Sbjct: 460 EKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFL 519 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEE 57238 GL +YR+FI F+ I +T K+ I +C+E Sbjct: 520 GLCGFYRKFIPNFAKIVKPMTLKLKKGA--IIDTKCKE 555 Score = 149 bits (373), Expect = 5e-033 Identities = 104/291 (35%), Positives = 151/291 (51%), Gaps = 8/291 (2%) Frame = -1 Query: 39466 YEFLMMSLGLTMPHPLSWT**HVCSGHNLIHLLSSSWMTYW----LYLWSWSEHELYLRI 39299 YE+ M GL P ++ C + L L+ + Y +Y EH L L+ Sbjct: 402 YEYTRMPFGLKNA-PATF---QRCMNNLLEDLIYKDCLVYLDDIIVYSTPLEEHILSLKK 457 Query: 39298 VLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHS 39119 V + LRD L + KCEF K F GH+V+ GI+ +P K +AI + P + ++ S Sbjct: 458 VFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKS 517 Query: 39118 FVGLVSYYRRFVEGFSTSATHLNLQDVSFMWL-VKCDM---SFLKLKELITSAPILTLLV 38951 F+GL +YR+F+ F+ + L+ + KC SF KLK LITS PIL Sbjct: 518 FLGLCGFYRKFIPNFAKIVKPMTLKLKKGAIIDTKCKEYIESFEKLKVLITSDPILIYPD 577 Query: 38950 EGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRH 38771 F++ DAS V + VL + + Y SR L HE+NY T + EL IV+A +R Sbjct: 578 FSKPFSLTTDASNVAIGAVLSQNHKPVCYASRTLNEHEINYATIEKELLAIVWATKYFRS 637 Query: 38770 YLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSR 38594 YL+G +E +DH L + ++ N + RW L ++D I Y PGK+N VA +LSR Sbjct: 638 YLFGRPFEVLSDHKPLVWLNNIKEPNMKLQRWKIKLNEFDYKIKYLPGKENHVADALSR 696 Score = 97.1 bits (238), Expect(3) = 1e-041 Identities = 65/206 (31%), Positives = 104/206 (49%), Gaps = 10/206 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +V+ I +P K + I ++ P + QI SFLGL G+YR+ + ++ Sbjct: 487 IVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFLGLCGFYRKFIPNFAKIVKPMTLKLKKG 546 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLY----------IDASQIGLGCVLMQ 68701 + +L L+ + +L+Y DAS + +G VL Q Sbjct: 547 AIIDTKCKEYIESFEKLKVLITS-------DPILIYPDFSKPFSLTTDASNVAIGAVLSQ 599 Query: 68702 KGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQ 68881 K V YASR L HE Y + EL+ +V+A K + +YL+G F V ++H+ L ++ N Sbjct: 600 NHKPVCYASRTLNEHEINYATIEKELLAIVWATKYFRSYLFGRPFEVLSDHKPLVWLNNI 659 Query: 68882 RDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 ++ ++ + W L ++D I Y PGK N VADALS Sbjct: 660 KEPNMKLQRWKIKLNEFDYKIKYLPGKENHVADALS 695 Score = 87.0 bits (212), Expect(2) = 3e-056 Identities = 54/126 (42%), Positives = 75/126 (58%), Gaps = 2/126 (1%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D S +GAVL + YASR L HE NY T + +L A+V+A K +R YL+G Sbjct: 582 FSLTTDASNVAIGAVLSQNHKPVCYASRTLNEHEINYATIEKELLAIVWATKYFRSYLFG 641 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR-KVGS 57663 EV +DH+ L ++ K+ N++ +RW L + D I Y GK N VADALSR K+ Sbjct: 642 RPFEVLSDHKPLVWLNNIKEPNMKLQRWKIKLNEFDYKIKYLPGKENHVADALSRTKIEV 701 Query: 57664 M-GSLAHS 57684 M G +A+S Sbjct: 702 MVGEVANS 709 Score = 68.7 bits (165), Expect(3) = 1e-041 Identities = 39/108 (36%), Positives = 52/108 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ IDL +HQ+++ E I+KTAF T++GHYE+ M F L NA ATF MN Sbjct: 368 CQYFTTIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLE 427 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH L+ VF L++ L + KCE Sbjct: 428 DLIYKDCLVYLDDIIVYSTPLEEHILSLKKVFEKLRDANLKLQLDKCE 475 Score = 54.3 bits (128), Expect(3) = 1e-041 Identities = 24/79 (30%), Positives = 51/79 (64%), Gaps = 5/79 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRK-----DEYMHMCI 67957 P++ PY+ + +E+ Q+++++ + +R S S + +P+ V +K + + + Sbjct: 280 PVYRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVV 339 Query: 67958 DYRQLNKITIIN*YPIPRIDDLFD 68029 DYR LN+IT+ + +PIPR+D++ D Sbjct: 340 DYRNLNEITVNDKFPIPRMDEILD 363 >dbj|BAA88542.1| (AP000969) ESTs D22114(C10364), AU076106(E20423) correspond to a region of the predicted gene.~Similar to retrovirus-related pol polyprotein from transposon Tnt 1-94. (P10978) [Oryza sativa] Length = 1268 Score = 196 bits (492), Expect = 6e-047 Identities = 158/572 (27%), Positives = 264/572 (45%), Gaps = 26/572 (4%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M ++ SV + +E ++ +L + + D+ A +++ LP SW + R Sbjct: 80 YDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKR 139 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENLR 6432 E D I + + + R ++VR G + K + N++++ +++ Sbjct: 140 -QEFSVLDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVK 195 Query: 6431 TDQT*LV*IVEKNDTFGRAIQS-----------QRRNRIKNLEMTMIL*IQQRTLGML*F 6285 K G +R++R K+ M + G + Sbjct: 196 PKAATNFKKKSKGKANGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSGYGKILP 254 Query: 6284 LV*TALLNHGFWILVHLS-HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTT 6108 V + + +W+ + H LF +++ G + + + + G G V +K T Sbjct: 255 TVLSVFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFT 314 Query: 6107 LRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYT 5928 L +V+++P IKKNL+S + VF + K V +G +SG L+ Sbjct: 315 SGKTVQLKNVQHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYETFVGKGYDSGGLFR 374 Query: 5927 -TLG--CINMDVVAESVSG--SCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 +L C N + V S +WH+RL H++ M L + C +C Sbjct: 375 FSLNDMCNNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTC 434 Query: 5762 VMGKQKRVSFTKTPREP*KVL-------LKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSR 5604 V KQ PR+P K L++ H+D+ + V + GG ++++T I D +R Sbjct: 435 VQSKQ--------PRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTR 486 Query: 5603 KVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLM 5424 +VY LK + FK +KAEVENQ K+KRLRSD GGEY + F +FC GI Sbjct: 487 FCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 546 Query: 5423 RAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFK 5244 P + NG+ ER N+ L E +M G+ K +W V T +++N+ +P+ K Sbjct: 547 MTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNK---IPMKHK 603 Query: 5243 ILE--EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 + E W RK+L S+LRT+GC V+V K+ KL K V C +GY + GYRF Sbjct: 604 EVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRF 661 Score = 192 bits (483), Expect(2) = 4e-056 Identities = 105/245 (42%), Positives = 152/245 (61%), Gaps = 5/245 (2%) Frame = -2 Query: 4908 TPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWEL 4729 TP E EE V R S+ R + Y++ + + P + +EA D+ W+ Sbjct: 718 TPEENPEE--DNIVDTRKSKRQRVAKSFGDD--YIVYLVDDTPRTIEEAYSSPDADYWKE 773 Query: 4728 AMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT--- 4561 A+ EM S+ N TW + + P G + + KWVF+ K PDG ++KA LV KG Sbjct: 774 AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 833 Query: 4560 -DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPG 4384 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+L++EIYM QP G+V+ G Sbjct: 834 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 893 Query: 4383 KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYL 4204 +E MVCKL +SLYGLKQAP+QW+KKFD+ +T + F E D C Y++ V L LY+ Sbjct: 894 QEGMVCKLLKSLYGLKQAPKQWHKKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYV 953 Query: 4203 DDMLIEGSSM 4174 DD+LI G+S+ Sbjct: 954 DDILIFGTSL 963 Score = 82.7 bits (201), Expect(2) = 5e-022 Identities = 52/137 (37%), Positives = 78/137 (55%), Gaps = 1/137 (0%) Frame = -3 Query: 87890 GTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSL 87711 G G + Q YV ++L RF D K TP P+ L + +Q Y +IGSL Sbjct: 996 GDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLR-KNRRIARDQLRYSQIIGSL 1054 Query: 87710 LYL-TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVG 87534 +YL +A+RPDI F+V +RF +NP + H QA++R++ YLKGT G+ Y G L G Sbjct: 1055 MYLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHY-TGYPKVLEG 1113 Query: 87533 YADVDYVGYLVDRKSTTG 87480 Y+D +++ + K+T+G Sbjct: 1114 YSDSNWISDADEIKATSG 1131 Score = 75.3 bits (182), Expect(3) = 8e-022 Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 9/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNK-NHF 65159 ++ Q NG ERK++ L E+ A+L + L +WGE +LT +++N++ + H + F Sbjct: 551 YSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKI--PMKHKEVTPF 608 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------ 65318 + K SYL+ +GCL + + K K P+T +FLGY ++ GY+ L Sbjct: 609 EEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGV 668 Query: 65319 -DFSTKKIHVSRDVSFYENVFP 65381 D I SRD +F+EN FP Sbjct: 669 PDMHVGTILESRDATFFENEFP 690 Score = 57.4 bits (136), Expect = 3e-005 Identities = 51/223 (22%), Positives = 88/223 (38%), Gaps = 5/223 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLE----EXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 W++D+ + H+ + +LF S + + V Sbjct: 265 WWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNV 324 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 +V + NL+S S LC ++ +++F S V T V G ++ + + + Sbjct: 325 QHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYET--FVGKGYDSGGLFRFSLNDMCN 382 Query: 88209 KKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + E D +WH RL H + + +L L+ PK + C C K Sbjct: 383 NHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLI---PKFTLVKGSKCHTCVQSKQ 439 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 + K+ + + LEL+H DLC V ++G K Y L+DD TR Sbjct: 440 PRKPHKASE-ARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTR 486 Score = 55.8 bits (132), Expect(2) = 4e-056 Identities = 39/100 (39%), Positives = 51/100 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS +FEMKDLG A IL +K+ R + L Q Y++KVLSRF +D KP TP Sbjct: 973 LSKSFEMKDLGEADVILNIKLQRGDEG-GITLVQSHYVDKVLSRFGYSDCKPAPTPYDPS 1031 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + + R Y+ I SL+ + TRPD Sbjct: 1032 VLLRKNRRIARDQLR-------YSQIIGSLMYLASATRPD 1064 Score = 52.3 bits (123), Expect(3) = 8e-022 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +L+ DL E VLT G KYF+ ++DD +R + LL K L K + + V NQ Sbjct: 456 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLE 515 Query: 64879 VTIKSIRTYNGLEFISHE 64932 IK +R+ G E+ S+E Sbjct: 516 RKIKRLRSDRGGEYFSNE 533 Score = 51.2 bits (120), Expect(2) = 5e-022 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W+++ L D + + VP CD Sbjct: 1136 LGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCD 1195 Query: 87297 N-TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N T I + + K ++H+ R +R G I++++ +AD FT L R Sbjct: 1196 NQTVIIKVNSSKDNMKSSRHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNV 1255 Query: 87120 FERNRLELGMM 87088 + E+G++ Sbjct: 1256 IDSASREMGLI 1266 Score = 25.4 bits (54), Expect(3) = 8e-022 Identities = 13/40 (32%), Positives = 22/40 (54%), Gaps = 2/40 (5%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 N +WH+RL HV+F M ++++ + F+ K C C Sbjct: 393 NDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTC 434 >dbj|BAB03249.1| (AB046118) polyprotein [Oryza sativa] Length = 1268 Score = 196 bits (492), Expect = 6e-047 Identities = 158/572 (27%), Positives = 264/572 (45%), Gaps = 26/572 (4%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M ++ SV + +E ++ +L + + D+ A +++ LP SW + R Sbjct: 80 YDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKR 139 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRDSSGSALSVN*RRRSKTKGQINMVDQNQRIEENLR 6432 E D I + + + R ++VR G + K + N++++ +++ Sbjct: 140 -QEFSVLDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVK 195 Query: 6431 TDQT*LV*IVEKNDTFGRAIQS-----------QRRNRIKNLEMTMIL*IQQRTLGML*F 6285 K G +R++R K+ M + G + Sbjct: 196 PKAATNFKKKSKGKANGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSGYGKILP 254 Query: 6284 LV*TALLNHGFWILVHLS-HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTT 6108 V + + +W+ + H LF +++ G + + + + G G V +K T Sbjct: 255 TVLSVFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFT 314 Query: 6107 LRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYT 5928 L +V+++P IKKNL+S + VF + K V +G +SG L+ Sbjct: 315 SGKTVQLKNVQHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYETFVGKGYDSGGLFR 374 Query: 5927 -TLG--CINMDVVAESVSG--SCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 +L C N + V S +WH+RL H++ M L + C +C Sbjct: 375 FSLNDMCNNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTC 434 Query: 5762 VMGKQKRVSFTKTPREP*KVL-------LKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSR 5604 V KQ PR+P K L++ H+D+ + V + GG ++++T I D +R Sbjct: 435 VQSKQ--------PRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTR 486 Query: 5603 KVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLM 5424 +VY LK + FK +KAEVENQ K+KRLRSD GGEY + F +FC GI Sbjct: 487 FCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHE 546 Query: 5423 RAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFK 5244 P + NG+ ER N+ L E +M G+ K +W V T +++N+ +P+ K Sbjct: 547 MTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNK---IPMKHK 603 Query: 5243 ILE--EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 + E W RK+L S+LRT+GC V+V K+ KL K V C +GY + GYRF Sbjct: 604 EVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRF 661 Score = 192 bits (483), Expect(2) = 4e-056 Identities = 105/245 (42%), Positives = 152/245 (61%), Gaps = 5/245 (2%) Frame = -2 Query: 4908 TPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWEL 4729 TP E EE V R S+ R + Y++ + + P + +EA D+ W+ Sbjct: 718 TPEENPEE--DNIVDTRKSKRQRVAKSFGDD--YIVYLVDDTPRTIEEAYSSPDADYWKE 773 Query: 4728 AMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT--- 4561 A+ EM S+ N TW + + P G + + KWVF+ K PDG ++KA LV KG Sbjct: 774 AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 833 Query: 4560 -DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPG 4384 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+L++EIYM QP G+V+ G Sbjct: 834 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 893 Query: 4383 KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYL 4204 +E MVCKL +SLYGLKQAP+QW+KKFD+ +T + F E D C Y++ V L LY+ Sbjct: 894 QEGMVCKLLKSLYGLKQAPKQWHKKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYV 953 Query: 4203 DDMLIEGSSM 4174 DD+LI G+S+ Sbjct: 954 DDILIFGTSL 963 Score = 82.7 bits (201), Expect(2) = 5e-022 Identities = 52/137 (37%), Positives = 78/137 (55%), Gaps = 1/137 (0%) Frame = -3 Query: 87890 GTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSL 87711 G G + Q YV ++L RF D K TP P+ L + +Q Y +IGSL Sbjct: 996 GDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLR-KNRRIARDQLRYSQIIGSL 1054 Query: 87710 LYL-TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVG 87534 +YL +A+RPDI F+V +RF +NP + H QA++R++ YLKGT G+ Y G L G Sbjct: 1055 MYLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHY-TGYPKVLEG 1113 Query: 87533 YADVDYVGYLVDRKSTTG 87480 Y+D +++ + K+T+G Sbjct: 1114 YSDSNWISDADEIKATSG 1131 Score = 75.3 bits (182), Expect(3) = 8e-022 Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 9/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNK-NHF 65159 ++ Q NG ERK++ L E+ A+L + L +WGE +LT +++N++ + H + F Sbjct: 551 YSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKI--PMKHKEVTPF 608 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------ 65318 + K SYL+ +GCL + + K K P+T +FLGY ++ GY+ L Sbjct: 609 EEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGV 668 Query: 65319 -DFSTKKIHVSRDVSFYENVFP 65381 D I SRD +F+EN FP Sbjct: 669 PDMHVGTILESRDATFFENEFP 690 Score = 57.4 bits (136), Expect = 3e-005 Identities = 51/223 (22%), Positives = 88/223 (38%), Gaps = 5/223 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLE----EXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 W++D+ + H+ + +LF S + + V Sbjct: 265 WWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNV 324 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 +V + NL+S S LC ++ +++F S V T V G ++ + + + Sbjct: 325 QHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYET--FVGKGYDSGGLFRFSLNDMCN 382 Query: 88209 KKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + E D +WH RL H + + +L L+ PK + C C K Sbjct: 383 NHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLI---PKFTLVKGSKCHTCVQSKQ 439 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 + K+ + + LEL+H DLC V ++G K Y L+DD TR Sbjct: 440 PRKPHKASE-ARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTR 486 Score = 55.8 bits (132), Expect(2) = 4e-056 Identities = 39/100 (39%), Positives = 51/100 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS +FEMKDLG A IL +K+ R + L Q Y++KVLSRF +D KP TP Sbjct: 973 LSKSFEMKDLGEADVILNIKLQRGDEG-GITLVQSHYVDKVLSRFGYSDCKPAPTPYDPS 1031 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + + R Y+ I SL+ + TRPD Sbjct: 1032 VLLRKNRRIARDQLR-------YSQIIGSLMYLASATRPD 1064 Score = 52.3 bits (123), Expect(3) = 8e-022 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +L+ DL E VLT G KYF+ ++DD +R + LL K L K + + V NQ Sbjct: 456 ELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLE 515 Query: 64879 VTIKSIRTYNGLEFISHE 64932 IK +R+ G E+ S+E Sbjct: 516 RKIKRLRSDRGGEYFSNE 533 Score = 51.2 bits (120), Expect(2) = 5e-022 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W+++ L D + + VP CD Sbjct: 1136 LGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCD 1195 Query: 87297 N-TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N T I + + K ++H+ R +R G I++++ +AD FT L R Sbjct: 1196 NQTVIIKVNSSKDNMKSSRHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNV 1255 Query: 87120 FERNRLELGMM 87088 + E+G++ Sbjct: 1256 IDSASREMGLI 1266 Score = 25.4 bits (54), Expect(3) = 8e-022 Identities = 13/40 (32%), Positives = 22/40 (54%), Gaps = 2/40 (5%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 N +WH+RL HV+F M ++++ + F+ K C C Sbjct: 393 NDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTC 434 >emb|CAA04050.1| (AJ000387) protease [Drosophila melanogaster] Length = 1217 Score = 168 bits (422), Expect(2) = 5e-056 Identities = 97/260 (37%), Positives = 143/260 (54%), Gaps = 5/260 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKK-----DESFRMCI 56584 PI YR E+K Q++ +L + IR S +PW A V V KK + +R+ I Sbjct: 316 PIHTKSYRYPFVHKTEVKKQIESMLDQQIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVI 375 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 +YR+LN T+ ++Y IP I+D D + A FS +DLTSG+ Q+++ ++ KTAF Sbjct: 376 DYRKLNDKTISDRYPIPNINDILDSIGKAKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEG 435 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GHYEF FGLKNAPA F +M+ + + ++DDI+I+S S + Sbjct: 436 GHYEFTRMPFGLKNAPATFQRVMDSVLGDLNGTICLFYLDDIIIFSPSLQKHLLDIKMVF 495 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 N + K EF + FLGH+V++DGV + +KI A+K + PTN + SF+ Sbjct: 496 EKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFL 555 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTK 57199 GL YYR+FI F+ I +T K Sbjct: 556 GLLGYYRKFIRDFARITKPMTKQLK 580 Score = 123 bits (307), Expect = 3e-025 Identities = 81/246 (32%), Positives = 136/246 (54%), Gaps = 8/246 (3%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S +H L +++V + LR + SK EF K + F GH+V+++G++ +P KI AI + Sbjct: 483 SLQKHLLDIKMVFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNPNKISAIKKF 542 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFL----KLKEL 38984 PT+ + SF+GL+ YYR+F+ F+ + Q + V D F+ + K L Sbjct: 543 PCPTNRRAIKSFLGLLGYYRKFIRDFARITKPMTKQ-LKGKRQVTTDKDFVDAFEQCKTL 601 Query: 38983 ITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFID----YVSRELKVHELNYPTRD 38816 +++ PIL F + DAS + VL + D + SR L E+NY T + Sbjct: 602 LSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQNDRPVCFASRTLSDTEVNYSTIE 661 Query: 38815 LELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILY 38636 E+ I++A+ +R Y+YGV++ TDH L +M ++ NS+ RW L +Y+ I++ Sbjct: 662 KEMLAIIWAVKYFRPYIYGVKFTIVTDHKPLIWLMNFKEPNSKIIRWRLQLMEYNFEIIH 721 Query: 38635 HPGKKNMVAYSLSR 38594 G +N++A +LSR Sbjct: 722 KKGSQNVIADALSR 735 Score = 88.9 bits (217), Expect = 1e-014 Identities = 99/374 (26%), Positives = 165/374 (43%), Gaps = 32/374 (8%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +V+++ + +P KI IK + P + I SFLGL GYYR+ + + Sbjct: 523 IVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRDFARITKPMTKQLKG- 581 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVL----MQKG 68707 +T+ + + LL P + + +L DAS LG VL +Q Sbjct: 582 -KRQVTTDKDFVDAFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQND 640 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 + V +ASR L E Y + E++ +++A+K + Y+YGV F + T+H+ L ++ N ++ Sbjct: 641 RPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPLIWLMNFKE 700 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLA-KDVQL 69064 + W L +Y+ I++ G NV+ADALS ++ L V P + K + Sbjct: 701 PNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSRADPNLNYNETLTVKPCPTSEKPINE 760 Query: 69065 LSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL--DS 69238 + +L I + ++ FD ++ KI LK A L D+ Sbjct: 761 FNTQLILEIDTNTSYQTTTPFKQKIRKKYSQPCFDFDNIVKILKGTLKPNRICAFLADDN 820 Query: 69239 EGVL---------RIKGHICVPRTGI*LD*TWRRSIV---*VTLFIQ---------GLLN 69355 L K H + R L IV FIQ G+ Sbjct: 821 NSALIEKAFSTYFAHKKHFKIIRCKSLL-----HEIVGNPEQNKFIQEYHTNSNHRGIDE 875 Query: 69356 IYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +L LK+ MK I + + C C ++K++ Q P + P Sbjct: 876 TFLHLKRETYFPNMKNKISELIRNCETCLKLKYDRQ-PQNIVFETP 920 Score = 79.2 bits (192), Expect(2) = 5e-056 Identities = 45/115 (39%), Positives = 69/115 (59%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVL----M*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 FI+ D S LGAVL + + +ASR L E NY T + ++ A+++A+K +R Sbjct: 617 FILTTDASNFALGAVLSQGSLQNDRPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYFRP 676 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 Y+YGVK + TDH+ L ++ K+ N + RW L + + I++ G NV+ADALSR Sbjct: 677 YIYGVKFTIVTDHKPLIWLMNFKEPNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSR 735 Score = 58.9 bits (140), Expect(2) = 1e-016 Identities = 32/79 (40%), Positives = 47/79 (58%), Gaps = 5/79 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRK-----DEYMHMCI 67957 PI YR E+K Q++ +L++ IR+S S W AP+ V +K + + I Sbjct: 316 PIHTKSYRYPFVHKTEVKKQIESMLDQQIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVI 375 Query: 67958 DYRQLNKITIIN*YPIPRIDDLFD 68029 DYR+LN TI + YPIP I+D+ D Sbjct: 376 DYRKLNDKTISDRYPIPNINDILD 399 Score = 56.6 bits (134), Expect(2) = 1e-016 Identities = 27/53 (50%), Positives = 36/53 (66%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN 68208 FS +DL S +HQ+++ +DI+KTAF GHYEF M F L NA ATF +M+ Sbjct: 407 FSTLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMD 459 >dbj|BAA22516.1| (D90852) ORF_ID:o250#12~similar to [SwissProt Accession Number P19778]~start codon is not identified yet [Escherichia coli] Length = 105 Score = 226 bits (569), Expect = 5e-056 Identities = 105/105 (100%), Positives = 105/105 (100%) Frame = +2 Query: 20408 SAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFA 20587 SAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFA Sbjct: 1 SAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFA 60 Query: 20588 DRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 DRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 DRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 105 >gb|AAG13538.1|AC023240_11 (AC023240) putative gag-pol polyprotein; 100266-105301 [Oryza sativa] Length = 1408 Score = 195 bits (491), Expect = 7e-047 Identities = 160/572 (27%), Positives = 261/572 (44%), Gaps = 22/572 (3%) Frame = -3 Query: 6791 FNLQMSENGSVSDHINEFNIIVSQLNSVDINFEDEIKALILMSSLPESWDTVVAVISSSR 6612 ++ +M ++ SV + +E ++ +L + + D+ A +++ LP SW + R Sbjct: 220 YDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKR 279 Query: 6611 GSEKLKFDEIRDVVLSKSIRKREVRDSS-GSALSVN*RRRSKTKGQINMVDQNQRIEENL 6435 + D I + + + R ++VR S N ++ N ++ Sbjct: 280 QEFSVP-DLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKA 338 Query: 6434 RTDQT*LV*IVEKNDTF--GR----AIQSQRRNRIKNLEMTMIL*IQQRTLGML*FLV*T 6273 T+ K D F G+ A R K+ M + G + V + Sbjct: 339 ATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSGYGKILPTVLS 398 Query: 6272 ALLNHGFWILVHLS-HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQ 6096 + +W+ + H LF +++ G + + + + G G V +K T Sbjct: 399 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 458 Query: 6095 RTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYT-TLG 5919 L +V+++P IKKNL+S + VF + K V +G +SG L+ +L Sbjct: 459 VQLKNVQHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLN 518 Query: 5918 --CINMDVVAESVSG--SCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGK 5751 C N + V S +WH+RL H++ M L + C +CV K Sbjct: 519 DMCNNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 578 Query: 5750 QKRVSFTKTPREP*KVL-------LKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWV 5592 Q PR+P K L++ H+D+ + V + GG ++++T I D +R +V Sbjct: 579 Q--------PRKPHKASEARNLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 630 Query: 5591 YFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVP 5412 Y LK + FK +KAEVENQ K+KRLRSD GGEY + F +FC GI P Sbjct: 631 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPP 690 Query: 5411 GKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILE- 5235 + NG+ ER N+ L E +M G+ K +W V T +++N+ +P+ K + Sbjct: 691 YSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNK---IPMKHKEVTP 747 Query: 5234 -EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRF 5076 E W RK+L S+LRT+GC V+V K+ KL K V C +GY + GYRF Sbjct: 748 FEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRF 801 Score = 190 bits (479), Expect(2) = 1e-055 Identities = 104/245 (42%), Positives = 152/245 (61%), Gaps = 5/245 (2%) Frame = -2 Query: 4908 TPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWEL 4729 TP E EE V R S+ R + Y++ + + P + +EA D+ W+ Sbjct: 858 TPEENPEE--DNIVDTRKSKRQRVAKSFGDD--YIVYLVDDTPRTIEEAYSSPDADYWKE 913 Query: 4728 AMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT--- 4561 A+ EM S+ N TW + + P G + + KWVF+ K PDG ++KA LV KG Sbjct: 914 AVCSEMDSIMSNGTWEVVERPYGCKPIGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 973 Query: 4560 -DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPG 4384 D+ + +SPV +LT+IR+LL + AS + + QMD KT FL+G+L++EIYM QP G+V+ G Sbjct: 974 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1033 Query: 4383 KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYL 4204 +E MVCKL +SLYGLKQAP+QW++KFD+ +T + F E D C Y++ V L LY+ Sbjct: 1034 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYV 1093 Query: 4203 DDMLIEGSSM 4174 DD+LI G+S+ Sbjct: 1094 DDILIFGTSL 1103 Score = 81.1 bits (197), Expect(2) = 3e-020 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Frame = -3 Query: 87890 GTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSL 87711 G G + Q YV ++L RF D K TP P+ L + +Q Y +IGSL Sbjct: 1136 GDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLR-KNRRIARDQLRYSQIIGSL 1194 Query: 87710 LYL-TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVG 87534 +YL +A+RPDI F+V +RF +NP + H +A++R++ YLKGT G+ Y G L G Sbjct: 1195 MYLASATRPDISFAVSKLSRFVSNPGDDHWRALERVMRYLKGTMSYGIHY-TGYPKVLEG 1253 Query: 87533 YADVDYVGYLVDRKSTTG 87480 Y+D +++ + K+T+G Sbjct: 1254 YSDSNWISDADEIKATSG 1271 Score = 75.3 bits (182), Expect(3) = 6e-022 Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 9/133 (6%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNK-NHF 65159 ++ Q NG ERK++ L E+ A+L + L +WGE +LT +++N++ + H + F Sbjct: 691 YSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKI--PMKHKEVTPF 748 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVL------ 65318 + K SYL+ +GCL + + K K P+T +FLGY ++ GY+ L Sbjct: 749 EEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGV 808 Query: 65319 -DFSTKKIHVSRDVSFYENVFP 65381 D I SRD +F+EN FP Sbjct: 809 PDMHVGTILESRDATFFENEFP 830 Score = 57.8 bits (137), Expect = 2e-005 Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 5/223 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLE----EXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 W++D+ + H+ + +LF S + + V Sbjct: 405 WWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNV 464 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 +V + NL+S S LC ++ +++F S V T V G ++ + + + Sbjct: 465 QHVPSIKKNLVSGSLLCREDFRLVFESNKCVVSKYGT--FVGKGYDSGGLFRFSLNDMCN 522 Query: 88209 KKLVCLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 + E D +WH RL H + + +L L+ PK + C C K Sbjct: 523 NHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLI---PKFTLVKGSKCHTCVQSKQ 579 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 + K+ + + LELIH DLC V ++G K Y L+DD TR Sbjct: 580 PRKPHKASE-ARNLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTR 626 Score = 55.8 bits (132), Expect(2) = 1e-055 Identities = 39/100 (39%), Positives = 51/100 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS +FEMKDLG A IL +K+ R + L Q Y++KVLSRF +D KP TP Sbjct: 1113 LSKSFEMKDLGEADVILNIKLQRGDEG-GITLVQSHYVDKVLSRFGYSDCKPAPTPYDPS 1171 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 L K + + R Y+ I SL+ + TRPD Sbjct: 1172 VLLRKNRRIARDQLR-------YSQIIGSLMYLASATRPD 1204 Score = 52.7 bits (124), Expect(3) = 6e-022 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 64699 DLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFR 64878 +L+ DL E VLT G KYF+ ++DD +R + LL K L K + + V NQ Sbjct: 596 ELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLE 655 Query: 64879 VTIKSIRTYNGLEFISHE 64932 IK +R+ G E+ S+E Sbjct: 656 RKIKRLRSDRGGEYFSNE 673 Score = 46.9 bits (109), Expect(2) = 3e-020 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 4/127 (3%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIF---CD 87298 LG +S S KQ + ST EAE A + W+++ L D + + VP CD Sbjct: 1276 LGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCD 1335 Query: 87297 NTSAINIVKNLVQH-KRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREH 87121 N I V + + K ++H+ R +R G I++++ +AD FT L Sbjct: 1336 NQIVIIKVNSSKDNMKSSRHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPCNV 1395 Query: 87120 FERNRLELGMM 87088 + E+G++ Sbjct: 1396 IDSASREMGLI 1406 Score = 25.4 bits (54), Expect(3) = 6e-022 Identities = 13/40 (32%), Positives = 22/40 (54%), Gaps = 2/40 (5%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMKGISSIHI--SFSPKKHFVCTVC 64633 N +WH+RL HV+F M ++++ + F+ K C C Sbjct: 533 NDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTC 574 >gb|AAA50456.1| (U15406) gag, pol and env protein precursor [Caenorhabditis elegans] Length = 2272 Score = 164 bits (412), Expect(2) = 2e-055 Identities = 95/276 (34%), Positives = 145/276 (52%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQL 56599 PI P + A E++ +Q++L + IR S +PW + V+ VKKKD S RMCI+YR++ Sbjct: 1028 PIRQKPRPIPLALKPEIRKMIQKMLNQKVIRESKSPWSSPVVLVKKKDGSIRMCIDYRKV 1087 Query: 56600 NKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEF 56779 NKV N + +P I+ + G +++ D+ +G+ Q+ + + TAF +E+ Sbjct: 1088 NKVVKNNAHPLPNIEATLQSLAGKKLYTVFDMIAGFWQIPLDEKSKEITAFAIGSELFEW 1147 Query: 56780 LVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXX 56959 V FGL +PA F G M I L + V++DD+LI SK + Sbjct: 1148 NVLPFGLVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDVKEALTRIRK 1207 Query: 56960 KNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASY 57139 + + KC V +LGH V+ DGV K + +K + +PTNV ++ SF+GL Y Sbjct: 1208 SGMKLRASKCHIAKKEVEYLGHKVTLDGVETQEVKTDKMKQFSRPTNVKELQSFLGLVGY 1267 Query: 57140 YRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YR+FI F+ IA LT+L V +IW E E +FQ Sbjct: 1268 YRKFILNFAQIASSLTSLISAKVAWIWEKEQEIAFQ 1303 Score = 146 bits (365), Expect = 4e-032 Identities = 154/571 (26%), Positives = 267/571 (45%), Gaps = 32/571 (5%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 +H ++ L +R + + SKC K V + GH V+ +G+ +K + + + RP Sbjct: 1193 QHLQDVKEALTRIRKSGMKLRASKCHIAKKEVEYLGHKVTLDGVETQEVKTDKMKQFSRP 1252 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGF---STSATHLNLQDVSFMWLVKCDMSFLKLKELITSA 38972 T+V E+ SF+GLV YYR+F+ F ++S T L V+++W + +++F +LK+L+ Sbjct: 1253 TNVKELQSFLGLVGYYRKFILNFAQIASSLTSLISAKVAWIWEKEQEIAFQELKKLVCQT 1312 Query: 38971 PIL------TLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYP 38825 P+L L F IY DAS G+ VL ++G I + S+ L E Y Sbjct: 1313 PVLAQPDVEAALKGDRPFMIYTDASRKGIGAVLAQEGPDGQQHPIAFASKALSPAETRYH 1372 Query: 38824 TRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLS 38645 DLE ++FAL ++ +YG +TDH L ++ L R RW + ++D+ Sbjct: 1373 ITDLEALAMMFALRRFKTIIYGTAITVFTDHKPLISLLKGSPLADRLWRWSIEILEFDVK 1432 Query: 38644 ILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAY 38465 I+Y GK N VA +LSR P+ + E+ L +A DI S C L Sbjct: 1433 IVYLAGKANAVADALSRGG----CPPNELEEEQTKELTSIVNAIQTELPDILDSSCWL-- 1486 Query: 38464 MGVQSSLYDRNRGWQFED*ALLSLRDQ---VLAGDGDQATLDF----DGVLKFS--GRIS 38312 L + GW+ AL + + + G + +L++ GVLK + S Sbjct: 1487 ----ERLKGEDEGWKEVIAALEGGKTKGTFKIVGIESEISLEYYKIVGGVLKNTEIEEQS 1542 Query: 38311 VPTVGDSIQL-ILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFV---SRCLCY 38144 V + I+ +L E HE + H G KM+R + + + W MR + + V ++CLC Sbjct: 1543 RSVVPEKIRTPLLKELHEGMLAGHFGIKKMWRMVHRKFYWPQMRVCVENCVRTCAKCLCA 1602 Query: 38143 QQVKVEHLRSGGAFKRLSISEWKWDRITMDFV-AGLPQTSKGVDSIYVIVDQLTKSAHFL 37967 +H + + ++ + + + D + GL + +G I I+D TK + Sbjct: 1603 N----DHSKLTSSLTPYRMT-FPLEIVACDLMDVGL--SVQGNRYILTIIDLFTKYGTAV 1655 Query: 37966 PV-QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAF 37790 P+ V A + W + +P+ +++D+G +F + F L + + Sbjct: 1656 PIPDKKAETVLKAFVERWAIGEGR-IPLKLLTDQGKEFVNGLFAQFTHMLKIEHITTKGY 1714 Query: 37789 HPQTDDQSEH---TIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVAL 37619 + + + E TI + +E+ D A +AYN+ H N + Sbjct: 1715 NSRANGAVERFNKTIMHIMKKKTAVPMEW----DDQVVYAVYAYNNCVHENTGETPMFLM 1770 Query: 37618 YGR 37610 +GR Sbjct: 1771 HGR 1773 Score = 88.9 bits (217), Expect = 1e-014 Identities = 64/205 (31%), Positives = 107/205 (51%), Gaps = 15/205 (7%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 V+ + + K + +K + RP +V ++ SFLGL GYYR+ ++++ + Sbjct: 1231 VTLDGVETQEVKTDKMKQFSRPTNVKELQSFLGLVGYYRKFILNFAQIASSLTSLISAKV 1290 Query: 68555 SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERV----------LLYIDASQIGLGCVLMQK 68704 + + L L+ + P + V ++Y DAS+ G+G VL Q+ Sbjct: 1291 AW-IWEKEQEIAFQELKKLVCQT-PVLAQPDVEAALKGDRPFMIYTDASRKGIGAVLAQE 1348 Query: 68705 GK-----VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQY 68869 G +A+AS+ L E +Y I DLE + ++FAL+ + +YG VFT+H+ L Sbjct: 1349 GPDGQQHPIAFASKALSPAETRYHITDLEALAMMFALRRFKTIIYGTAITVFTDHKPLIS 1408 Query: 68870 IFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 + L R W + ++D+ I+Y GK N VADALS Sbjct: 1409 LLKGSPLADRLWRWSIEILEFDVKIVYLAGKANAVADALS 1448 Score = 81.1 bits (197), Expect(2) = 2e-055 Identities = 47/115 (40%), Positives = 69/115 (59%), Gaps = 5/115 (4%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*E-----RNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWR 57471 F++Y D S G+GAVL E ++ I +AS+ L E Y DL+ A++FAL++++ Sbjct: 1330 FMIYTDASRKGIGAVLAQEGPDGQQHPIAFASKALSPAETRYHITDLEALAMMFALRRFK 1389 Query: 57472 HYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 +YG V+TDH+ L + L R RW + + D+ I+Y GKAN VADALSR Sbjct: 1390 TIIYGTAITVFTDHKPLISLLKGSPLADRLWRWSIEILEFDVKIVYLAGKANAVADALSR 1449 Score = 76.5 bits (185), Expect = 6e-011 Identities = 40/116 (34%), Positives = 66/116 (56%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 V+ +F +VF ++ +S + I++ G +PI P I A E++ +Q +LN+ Sbjct: 995 VIEQFQDVFAISDDELGRNSGTECVIELKEGAEPIRQKPRPIPLALKPEIRKMIQKMLNQ 1054 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQG 68041 IR S S W +P++ VK+KD + MCIDYR++NK+ N +P+P I+ L G Sbjct: 1055 KVIRESKSPWSSPVVLVKKKDGSIRMCIDYRKVNKVVKNNAHPLPNIEATLQSLAG 1110 >gb|AAD25646.1|AC007109_4 (AC007109) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1461 Score = 177 bits (444), Expect = 2e-041 Identities = 125/405 (30%), Positives = 184/405 (44%), Gaps = 4/405 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H S ++LF+ V L + I G G V I + L +V +IP + N Sbjct: 451 HVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDI----ILQNVLFIPEFRLN 506 Query: 6050 LISVGQFDST-GYAAVFGKGSWKI---VKGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 LIS+ + G +F +I KG + + G G LY L + + +V Sbjct: 507 LISISSLTTDLGTRVIFDPSCCQIQDLTKG-LTLGEGKRIGNLYV-LDTQSPAISVNAVV 564 Query: 5882 GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KV 5703 +WH RLGH S + L K+ C C + KQK++SF Sbjct: 565 DVSVWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSA-NNICNS 623 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 ++ H DVWGP V ++ G ++++T + D SR W+Y LK SDV F + VENQ Sbjct: 624 TFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQ 683 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 +VK +RSDN E FT F AKGI + P QN + ER ++ + AR++ Sbjct: 684 YDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARAL 740 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 M +W + V T +LINR PS L K EV K YS L+TFGC Y Sbjct: 741 MFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSST 800 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV 5016 ++R+K ++ C +GY GY+ D ++ + +V F E + Sbjct: 801 SSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEEL 849 Score = 158 bits (396), Expect = 1e-035 Identities = 88/227 (38%), Positives = 142/227 (61%), Gaps = 9/227 (3%) Frame = -2 Query: 4824 SHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALL 4645 SH L+ + P+S+ EA +DS +W A+D E+ ++E+ DTW +T LP GK+A+ Sbjct: 933 SHMLYINNISKIPIPQSYHEA---KDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVG 989 Query: 4644 NKWVFRIKT*PDGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENM 4480 KWVF +K DG RFKA +V KG DY E FSPV K+ ++++LL + AS+ Sbjct: 990 CKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKW 1049 Query: 4479 HLEQMDEKTVFLHGDLDKEIYMQQPKGFV-VPGKE---HMVCKLTRSLYGLKQAPRQWYK 4312 +L Q+D FL+GDL++ IYM+ P G+ + G ++VC+L +S+YGLKQA RQW+ Sbjct: 1050 YLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFL 1109 Query: 4311 KFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 KF + + F K D + + + ++ LL+Y+DD++I ++ + +L + + Sbjct: 1110 KFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEAL 1165 Score = 151 bits (378), Expect(4) = 2e-055 Identities = 74/166 (44%), Positives = 107/166 (63%), Gaps = 1/166 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN VERKH+H+L VARAL++QS + YWG+C+LT +LINR +++L NK F+V Sbjct: 719 TPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEV 778 Query: 65166 LYNK*PAYSYLKVFGCLCFPTLNS-HKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L K P YS LK FGCLC+ + +S + KF PR+ +FLGYPF GYK+LD + +H Sbjct: 779 LTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVH 838 Query: 65343 VSRDVSFYENVFPFTLFEVDFSFSTTLEKLSINQNILHSTNSTLNYV 65483 +SR+V F+E +FP + +TT + + L S NS +++ Sbjct: 839 ISRNVEFHEELFPLASSQ---QSATTASDVFTPMDPLSSGNSITSHL 882 Score = 95.2 bits (233), Expect(2) = 2e-035 Identities = 50/138 (36%), Positives = 76/138 (54%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 T G + Q+KY ELL M D K P+ P +L ++++YR ++G L+ Sbjct: 1188 TSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLM 1247 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YLT +RPDI F+V +F + P+ +H+ AV ++L Y+KGT G++Y + L GY Sbjct: 1248 YLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYT 1307 Query: 87527 DVDYVGYLVDRKSTTGMT 87474 D D+ R+STTG T Sbjct: 1308 DADWGTCPDSRRSTTGFT 1325 Score = 84.3 bits (205), Expect(4) = 2e-055 Identities = 44/104 (42%), Positives = 59/104 (56%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 KK+ H + + FP N N F+LL +D+W P+ V T GYKYFL IVDD Sbjct: 596 KKSAYCHVCHLAKQKKLSFPSANNIC-NSTFELLHIDVWGPFSVETVEGYKYFLTIVDDH 654 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLE 64917 SR+TW LL KS+ L +F+ LV NQ+ +KS+R+ N E Sbjct: 655 SRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKE 698 Score = 83.5 bits (203), Expect(2) = 2e-035 Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 2/113 (1%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPI-FCD 87298 F+GS LIS SKKQ +V+ S+AEAEY A AL ++ W+ L L++ VPI + D Sbjct: 1327 FVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLL--LALRVHSGVPILYSD 1384 Query: 87297 NTSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 +T+A+ I N V H+RTKH++I H +R+ ++ GQ+ + ++Q+ADI T L Sbjct: 1385 STAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPL 1439 Score = 82.7 bits (201), Expect = 7e-013 Identities = 65/233 (27%), Positives = 110/233 (46%), Gaps = 3/233 (1%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 S W +DS + H++ ++ LF +L+ + + + V Sbjct: 438 SSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQNV 497 Query: 88389 YYVKGLIHNLLSISQLC-DKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTST-- 88219 ++ NL+SIS L D +VIF + ++ +L + GKR ++Y +DT + Sbjct: 498 LFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQSPA 557 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 I +V +SV WHKRL H S +L+ L V+G ++K K+ C C L Sbjct: 558 ISVNAVVDVSV-------WHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLA 607 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 K K SF S + ++ + EL+H+D+ GP V++ Y +VDD++R T Y+ Sbjct: 608 KQKKLSFPSANNICNS-TFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYL 662 Score = 81.5 bits (198), Expect = 2e-012 Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 6/182 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLEC-----IWERXXXXXXXXXXXXVEKG 527 Y W M++++ +NK+G +DGS P+ LE +W R V Sbjct: 88 YGDWSVAMRISLDAKNKLGFVDGSLPRP----LESDPNFRLWSRCNSMVKSWLLNSVSPQ 143 Query: 526 LLGSIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEK 347 + SI+ A D+W +L++RFN + T+NL QEI ++ QGT S+ Y++ K LW++ Sbjct: 144 IYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQ 203 Query: 346 FEVVVPTPS-CECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYL 170 + C C ++ L GLNESY R QI+ P + + Y Sbjct: 204 LDSTEALDDPCTCGKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLAEVYH 263 Query: 169 MVMSDESK 146 ++ D S+ Sbjct: 264 ILDQDNSQ 271 Score = 67.1 bits (161), Expect(2) = 3e-019 Identities = 30/100 (30%), Positives = 51/100 (51%) Frame = +3 Query: 62745 SNNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAA 62924 + + F++H ++ G +I+ T Y W + S KNK GF++G + P Sbjct: 62 TQSPFFLHSADHPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPN 121 Query: 62925 FALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 F LW RC+ MV SW NS+ + ++ +N+A +W +L Sbjct: 122 FRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDL 161 Score = 57.4 bits (136), Expect(2) = 3e-019 Identities = 48/190 (25%), Positives = 77/190 (40%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 +L DR++ N + Y L EI L Q + ++ YYT ++ L ++L + + C Sbjct: 160 DLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLDSTEALDDPCTCGKA 219 Query: 63220 VES*RCITLSKTDASFNSLWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPH 63399 V + +K LNE Y IVR I+ LP++A+ + IL ++ Sbjct: 220 VRLYQKAEKAKIMKFLAG--LNESYAIVRRQIIAKKALPSLAEVYHIL-----DQDNSQK 272 Query: 63400 GKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKC 63579 G N + V+ S + + PT +C VGH ++C Sbjct: 273 GFFNVVAPPAAFQVSEVSHSPITSPEIMYVQSGPNKGRPT------CSFCNRVGHIAERC 326 Query: 63580 YKLSWFPIGF 63609 YK FP GF Sbjct: 327 YKKHGFPPGF 336 Score = 47.6 bits (111), Expect = 0.026 Identities = 36/127 (28%), Positives = 65/127 (50%), Gaps = 11/127 (8%) Frame = -3 Query: 4229 HMSFYSCIW-----MIC*LKDLV*GRTT------IWTRLSAAFEMKDLGPAKQILGMKIS 4083 H F CI ++ + D+V TT + L A+F++++LGP K LG++++ Sbjct: 1127 HTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVA 1186 Query: 4082 RDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLSKEQSPKTVEERNHMALVP 3903 R ++LSQ Y ++L+ + D KP + P+ + +LSK ++ + LV Sbjct: 1187 RTSEG--ISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLV- 1243 Query: 3902 YALAICSLVSVMVCTRPD 3849 + + TRPD Sbjct: 1244 ------GKLMYLTITRPD 1255 Score = 46.5 bits (108), Expect(2) = 9e-006 Identities = 26/87 (29%), Positives = 43/87 (48%) Frame = +2 Query: 64001 TIPFFSYLPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFN 64180 +I F LP G V+++ +G +N + L +LF+ F+ NLIS+ SL + + F+ Sbjct: 465 SIVSFVNLPTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFD 524 Query: 64181 SFSCLMQGPSMKSPLEIGRAHNGLYFL 64261 C +Q + L G+ LY L Sbjct: 525 PSCCQIQDLTKGLTLGEGKRIGNLYVL 551 Score = 32.1 bits (71), Expect(2) = 9e-006 Identities = 11/22 (50%), Positives = 20/22 (90%) Frame = +3 Query: 63915 LSNNSWIIDSGASNHMTFDKTL 63980 LS+++W+IDSGA++H++ D+ L Sbjct: 437 LSSDTWVIDSGATHHVSHDRKL 458 Score = 30.5 bits (67), Expect(4) = 2e-055 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSI--HISFSPKKHFVCTVC 64633 +WH RLGH SF ++ +S + KK C VC Sbjct: 568 VWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVC 604 Score = 20.8 bits (42), Expect(4) = 2e-055 Identities = 11/44 (25%), Positives = 19/44 (43%) Frame = +2 Query: 65504 HYYFTNTDHPSPTYLPSTSKNINPPSLNEQDIVNQSPQKITTHE 65635 H YF N D P + I+P + + +++ P + HE Sbjct: 909 HCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHE 952 >gb|AAD39271.1|AC007203_3 (AC007203) Similar to reverse-transcriptases [Arabidopsis thaliana] Length = 748 Score = 171 bits (430), Expect = 1e-039 Identities = 82/148 (55%), Positives = 104/148 (69%) Frame = +1 Query: 69529 IVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSISIIS 69708 +V+ +R + D IWVIV+RLTKSAHF+ ++ T L K Y+ EIV+LHGV +SI+S Sbjct: 412 VVIPFARA--ELDAIWVIVDRLTKSAHFLAIRKTDGAAVLTKKYVSEIVKLHGVPVSIVS 469 Query: 69709 DRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQ 69888 DR +KF S FW + E+GT+V +ST +HPQTD QSE IQ LEDML CV+D+G HW Sbjct: 470 DRDSKFTSAFWRAFQAEMGTKVQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWGGHWAD 529 Query: 69889 FLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 L L+EFAYNN+Y S M PFE LYGR Sbjct: 530 QLSLIEFAYNNNYQASIGMTPFEVLYGR 557 Score = 166 bits (415), Expect(2) = 2e-055 Identities = 83/179 (46%), Positives = 118/179 (65%) Frame = -1 Query: 38041 LPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGS 37862 +P +D+I+VIVD+LTKSAHFL ++ L + Y+ E+V+ HGVPVSI+SDR S Sbjct: 414 IPFARAELDAIWVIVDRLTKSAHFLAIRKTDGAAVLTKKYVSEIVKLHGVPVSIVSDRDS 473 Query: 37861 QFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPL 37682 +FTS F FQ E+GT+V +S A+HPQTD QSE TIQ LEDML +CVL++GG L Sbjct: 474 KFTSAFWRAFQAEMGTKVQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWGGHWADQLSL 533 Query: 37681 AQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKID 37505 +FAYN+ + ++I M F LYGR CR+ + W + + G + +Q E++ V K++ Sbjct: 534 IEFAYNNNYQASIGMTPFEVLYGRPCRTQLCWTQVGERSIYGANYVQETTERIGVLKLN 592 Score = 79.6 bits (193), Expect(2) = 2e-055 Identities = 52/156 (33%), Positives = 76/156 (48%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q RH+SYAD RR L F V +R++L ++ ++G R KLSPRY+GPF I+ Sbjct: 593 MKEVQDRHRSYADKRRRELEFEVGERVYLKMAMLRGPNRSISETKLSPRYMGPFRIVERV 652 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 VAY L+L A H VF VSM R + + VL +L +T +L R Sbjct: 653 VPVAYRLELTDVMRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPGRVLERR 712 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSF 37038 + R+ L++ + W P R K+ F Sbjct: 713 IKELRRKKIPLIKVLWDCDGVTEETWEPEVRMKARF 748 Score = 59.7 bits (142), Expect = 6e-006 Identities = 27/43 (62%), Positives = 33/43 (75%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYF 68166 G FSKIDL S YHQ+ + E DI KTAF+TRYGH+EF+V+ F Sbjct: 374 GATCFSKIDLTSGYHQIPIAEADIRKTAFRTRYGHFEFVVIPF 416 Score = 58.2 bits (138), Expect = 2e-005 Identities = 29/52 (55%), Positives = 37/52 (70%) Frame = +2 Query: 56639 IDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSF 56794 ID+ D ++GA FSKIDLTSGY Q+ I ++ KTAF TR GH+EF+V F Sbjct: 365 IDELLDQLRGATCFSKIDLTSGYHQIPIAEADIRKTAFRTRYGHFEFVVIPF 416 Score = 41.8 bits (96), Expect = 1.5 Identities = 29/122 (23%), Positives = 47/122 (37%), Gaps = 1/122 (0%) Frame = -3 Query: 40730 MIGVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWWR 40554 M+ QR+ FSG E+A ++ S D H G A WWR Sbjct: 1 MMEQLQRIGTGYFSGGTSPEEADSWRSRVERNFGSSKCSVEYLVDLAVHFLEGDAHLWWR 60 Query: 40553 TY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEFS 40374 + R + W+ F F +++ P+ R+ F L G ++ EY+ F+ Sbjct: 61 SVTAKRR--QADMFWADFVAEFNAKYCPQEALDRMEARFLELTQGERSVREYDREFNRLL 118 Query: 40373 RHA 40365 +A Sbjct: 119 VYA 121 Score = 39.5 bits (90), Expect = 7.6 Identities = 22/62 (35%), Positives = 28/62 (44%) Frame = +2 Query: 53765 VEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLSLE 53944 V+ + + DA +WW+S R M WA F + F KY P DR FL L Sbjct: 44 VDLAVHFLEGDAHLWWRSVT--AKRRQADMFWADFVAEFNAKYCPQEALDRMEARFLELT 101 Query: 53945 QG 53950 QG Sbjct: 102 QG 103 >gb|AAA92249.1| (M32662) ORF B (bases 1850-5560) first start codon at 2306 [Autographa californica nucleopolyhedrovirus] Length = 1084 Score = 159 bits (398), Expect(2) = 1e-054 Identities = 85/276 (30%), Positives = 149/276 (53%), Gaps = 5/276 (1%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKK-----DESFRMCI 56584 P+ YR +E++ Q+ ++L +G IRPS + W + + V KK + +R+ + Sbjct: 138 PVYTKSYRYPFIHRQEVRDQITKMLDQGIIRPSDSAWSSPIWVVPKKIDASGKQKWRLVV 197 Query: 56585 EYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC 56764 ++R+LN+ T+ +KY IP I D D + F+ +DL SG+ Q+++ ++ KTAF Sbjct: 198 DFRKLNEKTIDDKYPIPNISDVLDKLGKCQYFTTLDLASGFYQVEMDPQDISKTAFNVEH 257 Query: 56765 GHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXX 56944 GH+EFL GLKN+P+ F +M+ + + +V++DDI++YS S + Sbjct: 258 GHFEFLRMPMGLKNSPSTFQRVMDNVLRGLQNNICLVYLDDIIVYSTSLQEHLENLERVF 317 Query: 56945 XXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFV 57124 N + K EF ++LGH++S+DG+ + KI A++ ++ P ++ F+ Sbjct: 318 QRLRESNFKIQMDKSEFLKLETAYLGHIISRDGIKPNPDKISAIQKYLIPKTPKEIKQFL 377 Query: 57125 GLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 GL YYR+FI F+ + LT K+ S E +F+ Sbjct: 378 GLLGYYRKFIPDFARLTKPLTQCLKKGSKVTLSPEYVNAFE 418 Score = 133 bits (332), Expect(2) = 2e-029 Identities = 93/250 (37%), Positives = 133/250 (53%), Gaps = 7/250 (2%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EH L V Q LR+ + K EF A+ GH++S++GI+ +P KI A Sbjct: 301 VYSTSLQEHLENLERVFQRLRESNFKIQMDKSEFLKLETAYLGHIISRDGIKPNPDKISA 360 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN--LQDVSFMWLV-KCDMSFLKL 38993 I + P + E+ F+GL+ YYR+F+ F+ L L+ S + L + +F Sbjct: 361 IQKYLIPKTPKEIKQFLGLLGYYRKFIPDFARLTKPLTQCLKKGSKVTLSPEYVNAFEHC 420 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFID----YVSRELKVHELNYP 38825 K L+T+ PIL F + DAS + VL + D Y SR L ELNY Sbjct: 421 KTLLTNDPILQYPDFTREFNLTTDASNFAIGAVLSQGPIGSDKPVCYASRTLNESELNYS 480 Query: 38824 TRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLS 38645 T + EL IV+A +R YL+G +++ TDH LQ +M +D NSR RW L +YD S Sbjct: 481 TIEKELLAIVWATKYFRPYLFGRKFKILTDHKPLQWMMNLKDPNSRMTRWRLRLSEYDFS 540 Query: 38644 ILYHPGKKNMVAYSLSR 38594 ++Y GK N A +LSR Sbjct: 541 VVYKKGKSNTNADALSR 557 Score = 97.5 bits (239), Expect(3) = 3e-040 Identities = 71/206 (34%), Positives = 108/206 (51%), Gaps = 9/206 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXX 68536 ++S++ I +P KI I+ ++ P + +I FLGL GYYR+ + ++ P Sbjct: 345 IISRDGIKPNPDKISAIQKYLIPKTPKEIKQFLGLLGYYRKFIPDFARLTKPLTQCLKKG 404 Query: 68537 XXXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ----K 68704 LS + K+ N +L++ P RE L DAS +G VL Q Sbjct: 405 SKVT-LSPEYVNAFEHCKTLLTNDPILQY-PDFTRE-FNLTTDASNFAIGAVLSQGPIGS 461 Query: 68705 GKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQR 68884 K V YASR L E Y + EL+ +V+A K + YL+G F + T+H+ LQ++ N + Sbjct: 462 DKPVCYASRTLNESELNYSTIEKELLAIVWATKYFRPYLFGRKFKILTDHKPLQWMMNLK 521 Query: 68885 DLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 D R W L +YD +++Y GK+N ADALS Sbjct: 522 DPNSRMTRWRLRLSEYDFSVVYKKGKSNTNADALS 556 Score = 83.9 bits (204), Expect(2) = 1e-054 Identities = 48/115 (41%), Positives = 68/115 (58%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVL----M*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + D S +GAVL + + YASR L E NY T + +L A+V+A K +R Sbjct: 439 FNLTTDASNFAIGAVLSQGPIGSDKPVCYASRTLNESELNYSTIEKELLAIVWATKYFRP 498 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 YL+G K ++ TDH+ L ++ KD N R RW L + D +++Y GK+N ADALSR Sbjct: 499 YLFGRKFKILTDHKPLQWMMNLKDPNSRMTRWRLRLSEYDFSVVYKKGKSNTNADALSR 557 Score = 61.3 bits (146), Expect(3) = 3e-040 Identities = 37/119 (31%), Positives = 58/119 (48%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ +DL S ++Q+++ +DISKTAF +GH+EFL M L N+ +TF +M+ R Sbjct: 226 CQYFTTLDLASGFYQVEMDPQDISKTAFNVEHGHFEFLRMPMGLKNSPSTFQRVMDNVLR 285 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG 68397 +EH +L VF L+E + K E +L ++ Y G Sbjct: 286 GLQNNICLVYLDDIIVYSTSLQEHLENLERVFQRLRESNFKIQMDKSE-FLKLETAYLG 343 Score = 57.0 bits (135), Expect(3) = 3e-040 Identities = 28/79 (35%), Positives = 49/79 (61%), Gaps = 5/79 (6%) Frame = +2 Query: 67793 PIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRK-----DEYMHMCI 67957 P++ YR +E++DQ+ +L++ IR S S+W +P+ V +K + + + Sbjct: 138 PVYTKSYRYPFIHRQEVRDQITKMLDQGIIRPSDSAWSSPIWVVPKKIDASGKQKWRLVV 197 Query: 67958 DYRQLNKITIIN*YPIPRIDDLFD 68029 D+R+LN+ TI + YPIP I D+ D Sbjct: 198 DFRKLNEKTIDDKYPIPNISDVLD 221 Score = 40.2 bits (92), Expect = 4.4 Identities = 56/240 (23%), Positives = 96/240 (39%), Gaps = 11/240 (4%) Frame = -1 Query: 38245 HLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWKWDR 38066 H G + Y L + Y W M+ I F++ C Q K + F + + + Sbjct: 744 HRGINECYLALSKRYYWPRMKDQITKFINECTICGQAKYDRNPIRPQFNIVPPATKPLET 803 Query: 38065 ITMDFVAGLPQTSKGVDSIYVIVDQLTK--SAHFLPVQSLFSVVRLARIYIWEVVRFHGV 37892 + MD Q K + +D TK A+ L + S+++ + HG+ Sbjct: 804 VHMDLFT--VQNEKYI----TFIDVFTKYGQAYHLRDGTAISILQA----LLRFCTHHGL 853 Query: 37891 PVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLED-----MLHV 37727 P++I++D G++F++ + F V + H +T S +E + H+ Sbjct: 854 PITIVTDNGTEFSNQLFSEF-------VRIHKIIHHKTLPHSPSDNGNIERFHSTILEHI 906 Query: 37726 CVLEFGGQ*D---QFSPLAQFAYNSIFHSNIQMVLFVALYGRICRSLVGWFESMDPR-PR 37559 +L+ + + P A YNS HS + F L G DPR P Sbjct: 907 RILKLQHKDEPIVNLMPYAIIGYNSSIHSFTKCRPFDLLNGH-----------FDPRDPL 955 Query: 37558 GTDLIQGALEQ 37526 DL + L+Q Sbjct: 956 DIDLTEHILQQ 966 Score = 25.1 bits (53), Expect(2) = 2e-029 Identities = 10/36 (27%), Positives = 21/36 (57%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 +PS F +M + R ++ ++++DDI+V L+ Sbjct: 272 SPSTFQRVMDNVLRGLQNNICLVYLDDIIVYSTSLQ 307 >gb|AAC33318.1| (AF056940) pol polyprotein [Drosophila virilis] Length = 1188 Score = 157 bits (393), Expect(2) = 8e-036 Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 3/252 (1%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 ++ S EH L L+ V + LR+ L + KCEF K F GH+++ EGI+ +P KI+A Sbjct: 486 IFSTSLEEHILSLQKVFKKLREANLKLQLDKCEFMRKETEFLGHIITTEGIKPNPNKIQA 545 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQDVSFMWLVK---CDMSFLKL 38993 I + P + E+ SF+GL +YR+F+ F+ L L+ +K +++F KL Sbjct: 546 IVKFPIPKTPKEIKSFLGLCGFYRKFIPNFANIVKPLTLKLKGSKINIKDRDYELAFEKL 605 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDL 38813 K LITS PIL F++ DAS + + VL ++ I Y SR L HELNY T + Sbjct: 606 KVLITSDPILIYPNFEKPFSLTTDASNMAIGAVLSQEHKPICYASRTLNEHELNYSTIEK 665 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL IV+A +R YL+G Q++ +DH L + ++ N + RW L ++D I Y Sbjct: 666 ELLAIVWATKYFRSYLFGRQFQILSDHRPLVWLNNMKEPNMKLQRWKIKLNEFDFQIKYV 725 Query: 38632 PGKKNMVAYSLSRKQ 38588 PGK+N VA +LSR Q Sbjct: 726 PGKENYVADALSRIQ 740 Score = 149 bits (372), Expect(2) = 2e-054 Identities = 79/221 (35%), Positives = 128/221 (57%), Gaps = 5/221 (2%) Frame = +2 Query: 56525 PWGALVLFVKKKDESF-----RMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKI 56689 P G V+ V K++++F R+ I+YR N++T+ +KY IP +D+ D + F+ I Sbjct: 358 PNGLPVIIVPKRNDAFGKPKFRLVIDYRHFNELTINDKYPIPIMDEILDKLGKCQYFTTI 417 Query: 56690 DLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFV 56869 DL G+ Q+++ ++PKTAF T+ GHYE+ FGLKNAPA F MN + + + Sbjct: 418 DLAKGFHQIQMDPGSIPKTAFSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLEDLIFKDC 477 Query: 56870 IVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVM 57049 +V +DDI+I+S S + NL + KCEF FLGH+++ +G+ Sbjct: 478 LVHLDDIIIFSTSLEEHILSLQKVFKKLREANLKLQLDKCEFMRKETEFLGHIITTEGIK 537 Query: 57050 VDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLT 57187 + +KI+A+ + P ++ SF+GL +YR+FI F++I LT Sbjct: 538 PNPNKIQAIVKFPIPKTPKEIKSFLGLCGFYRKFIPNFANIVKPLT 583 Score = 102 bits (252), Expect(3) = 3e-037 Identities = 74/242 (30%), Positives = 121/242 (49%), Gaps = 10/242 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 +++ E I +P KI+ I + P + +I SFLGL G+YR+ + ++ Sbjct: 530 IITTEGIKPNPNKIQAIVKFPIPKTPKEIKSFLGLCGFYRKFIPNFANIVKP-------- 581 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLY----------IDASQIGLGCVLMQ 68701 L+ L ++ K + + +L+Y DAS + +G VL Q Sbjct: 582 LTLKLKGSKINIKDRDYELAFEKLKVLITSDPILIYPNFEKPFSLTTDASNMAIGAVLSQ 641 Query: 68702 KGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQ 68881 + K + YASR L HE Y + EL+ +V+A K + +YL+G F + ++HR L ++ N Sbjct: 642 EHKPICYASRTLNEHELNYSTIEKELLAIVWATKYFRSYLFGRQFQILSDHRPLVWLNNM 701 Query: 68882 RDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQ 69061 ++ ++ + W L ++D I Y PGK N VADALS ++ L +S R Q Sbjct: 702 KEPNMKLQRWKIKLNEFDFQIKYVPGKENYVADALSRIQLNENFLGEDTISTRATIHSAQ 761 Query: 69062 LLSNSFVLYISE 69097 NS L I+E Sbjct: 762 -EDNSNHLQITE 772 Score = 93.6 bits (229), Expect(2) = 2e-054 Identities = 54/138 (39%), Positives = 75/138 (54%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D S +GAVL E I YASR L HE NY T + +L A+V+A K +R YL+G Sbjct: 624 FSLTTDASNMAIGAVLSQEHKPICYASRTLNEHELNYSTIEKELLAIVWATKYFRSYLFG 683 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + ++ +DHR L ++ K+ N++ +RW L + D I Y GK N VADALSR + Sbjct: 684 RQFQILSDHRPLVWLNNMKEPNMKLQRWKIKLNEFDFQIKYVPGKENYVADALSRIQLNE 743 Query: 57667 GSLAHSQVSRRPLAREVQ 57720 L +S R Q Sbjct: 744 NFLGEDTISTRATIHSAQ 761 Score = 66.0 bits (158), Expect(3) = 3e-037 Identities = 39/108 (36%), Positives = 50/108 (46%) Frame = +1 Query: 68041 CFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFR 68220 C F+ IDL +HQ+++ I KTAF T++GHYE+ M F L NA ATF MN Sbjct: 411 CQYFTTIDLAKGFHQIQMDPGSIPKTAFSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLE 470 Query: 68221 QYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH L+ VF L+E L + KCE Sbjct: 471 DLIFKDCLVHLDDIIIFSTSLEEHILSLQKVFKKLREANLKLQLDKCE 518 Score = 37.1 bits (84), Expect(3) = 3e-037 Identities = 19/42 (45%), Positives = 29/42 (68%), Gaps = 5/42 (11%) Frame = +2 Query: 67904 GAPLLFV-KRKDEY----MHMCIDYRQLNKITIIN*YPIPRIDDLFD 68029 G P++ V KR D + + IDYR N++TI + YPIP +D++ D Sbjct: 360 GLPVIIVPKRNDAFGKPKFRLVIDYRHFNELTINDKYPIPIMDEILD 406 Score = 22.7 bits (47), Expect(2) = 8e-036 Identities = 11/41 (26%), Positives = 18/41 (43%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP+ F M L + ++ +DDI++ LE Sbjct: 452 FGLKNAPATFQRCMNNLLEDLIFKDCLVHLDDIIIFSTSLE 492 >gb|AAD24647.1|AC006220_3 (AC006220) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 780 Score = 219 bits (552), Expect = 5e-054 Identities = 105/246 (42%), Positives = 158/246 (63%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 + P++ PYR + E+ + ++L G I+ S++P+ + V+ VKKKD ++R+C++YR Sbjct: 41 SNPVNQRPYRYVVHQKNEIDKIVDDMLASGTIQASSSPYASPVVLVKKKDGTWRLCVDYR 100 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 +LN +T+K+++ IP I+D D + G+ V+SKIDL +GY Q+++ ++ KTAF T GHY Sbjct: 101 ELNGMTVKDRFPIPLIEDLMDELGGSNVYSKIDLRAGYHQVRMDPLDIHKTAFKTHNGHY 160 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 E+LV FGL NAPA+F LMN FKP+L FV+VF DDILIYS S + Sbjct: 161 EYLVMPFGLTNAPASFQSLMNSFFKPFLRKFVLVFFDDILIYSTSMEEHKKHLEAVFEVM 220 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 +L+AK KC F + V +LGH +S +G+ D +KI+AV+ W P N+ + F+GL Sbjct: 221 RVHHLFAKMSKCAFAVPRVEYLGHFISGEGIATDPAKIKAVQDWPVPVNLKQLCGFLGLT 280 Query: 57134 SYYRRF 57151 YYRRF Sbjct: 281 GYYRRF 286 Score = 189 bits (476), Expect(2) = 3e-049 Identities = 139/489 (28%), Positives = 215/489 (43%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S EH+ +L V + +R L+AK SKC F + V + GH +S EGI DP KI+A Sbjct: 201 IYSTSMEEHKKHLEAVFEVMRVHHLFAKMSKCAFAVPRVEYLGHFISGEGIATDPAKIKA 260 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQDVSFMWLVKCDMSFLKLKEL 38984 + W P ++ ++ F+GL YYRRF Sbjct: 261 VQDWPVPVNLKQLCGFLGLTGYYRRF---------------------------------- 286 Query: 38983 ITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELNYPTRDLELA 38804 F + DA G G+ VLM++G + ++SR+LK +L+ + EL Sbjct: 287 ---------------FVVEMDACGHGIGAVLMQEGHPLAFISRQLKGKQLHLSIYEKELL 331 Query: 38803 VIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGK 38624 ++F + WRHYL + TD SL+ ++ QR +W+ L ++D I Y GK Sbjct: 332 AVIFVVRKWRHYLISSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYKQGK 391 Query: 38623 KNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSL 38444 +N+VA +LSR + V++ + E L +IQ A + DI +L Sbjct: 392 ENLVADALSRVEGSEVLHMALSVVECDLLKEIQ--AGYVTDGDIQGIITILQQQADSKKH 449 Query: 38443 YDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILSEAH 38264 Y W GVL+ +I VP IL H Sbjct: 450 YT----WS-------------------------QGVLRRKNKIVVPNNSGIKDTILRWLH 480 Query: 38263 EFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSIS 38084 H G ++ ++ + W M DI F+ C QQ K ++ S G + L I Sbjct: 481 CSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQAFIRSCGTCQQCKSDNAASPGLLQPLPIP 540 Query: 38083 EWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVR 37904 + W ++MDF+ GLP S G I V+VD+L+K+AHF+ + +S + +A+ Y+ V + Sbjct: 541 DRIWSDVSMDFIDGLP-LSNGKTVIMVVVDRLSKAAHFIALAHPYSAMTVAQAYLDNVFK 599 Query: 37903 FHGVPVSII 37877 HG P SI+ Sbjct: 600 LHGCPSSIV 608 Score = 110 bits (272), Expect(3) = 2e-049 Identities = 103/373 (27%), Positives = 153/373 (40%), Gaps = 2/373 (0%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 +S E I DP KI+ ++DW P ++ Q+ FLGL GYY Sbjct: 246 ISGEGIATDPAKIKAVQDWPVPVNLKQLCGFLGLTGYY---------------------- 283 Query: 68555 SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVAYASRQ 68734 R ++ +DA G+G VLMQ+G +A+ SRQ Sbjct: 284 ----------------------------RRFFVVEMDACGHGIGAVLMQEGHPLAFISRQ 315 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 LK + I++ EL+ V+F ++ W +YL HF + T+ RSL+Y+ QR ++ WL Sbjct: 316 LKGKQLHLSIYEKELLAVIFVVRKWRHYLISSHFIIKTDQRSLKYLLEQRLNTPIQQQWL 375 Query: 68915 ELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSNSFVLYIS 69094 L ++D I Y GK N+VADALS S L V + L K++Q Sbjct: 376 PKLLEFDYEIQYKQGKENLVADALSRVEGSEVLHMALSVVECDLLKEIQ----------- 424 Query: 69095 ESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREA--KAAILDSEGVLRIKGHI 69268 + DGD+ I +L+++A K S+GVLR K I Sbjct: 425 --------------------AGYVTDGDIQGI-ITILQQQADSKKHYTWSQGVLRRKNKI 463 Query: 69269 CVPRTGI*LD*TWRRSIV*VTLFIQGLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQV 69448 VP D R G + +K + M +DI F+ C CQQ Sbjct: 464 VVPNNSGIKDTILRWLHCSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQAFIRSCGTCQQC 523 Query: 69449 KHEHQKPGGVTLRIP 69493 K ++ G+ +P Sbjct: 524 KSDNAASPGLLQPLP 538 Score = 92.1 bits (225), Expect(3) = 2e-049 Identities = 47/110 (42%), Positives = 63/110 (56%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G +SKIDLR+ YHQ+++ DI KTAF+T GHYE+LVM F LTNA A+F LMN Sbjct: 123 LGGSNVYSKIDLRAGYHQVRMDPLDIHKTAFKTHNGHYEYLVMPFGLTNAPASFQSLMNS 182 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKC 68361 F+ + EEH+ HL VF +++ L+ K SKC Sbjct: 183 FFKPFLRKFVLVFFDDILIYSTSMEEHKKHLEAVFEVMRVHHLFAKMSKC 232 Score = 89.3 bits (218), Expect = 7e-015 Identities = 52/138 (37%), Positives = 77/138 (55%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F+V D G+GAVLM E + + + SRQLK + + ++ +L AV+F +++WRHYL Sbjct: 287 FVVEMDACGHGIGAVLMQEGHPLAFISRQLKGKQLHLSIYEKELLAVIFVVRKWRHYLIS 346 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + TD RSL Y+ Q+ +++W+ L + D I Y GK N+VADALSR GS Sbjct: 347 SHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYKQGKENLVADALSRVEGSE 406 Query: 57667 GSLAHSQVSRRPLAREVQ 57720 V L +E+Q Sbjct: 407 VLHMALSVVECDLLKEIQ 424 Score = 79.6 bits (193), Expect = 6e-012 Identities = 46/123 (37%), Positives = 74/123 (59%), Gaps = 4/123 (3%) Frame = +2 Query: 67694 VVSEFLEVF--PTDLPD--VPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQD 67861 VV+EF ++F PTDLP P D I+ D + P+ PYR + E+ + D Sbjct: 10 VVTEFPDIFVEPTDLPPFRAPHDHKIELLED----SNPVNQRPYRYVVHQKNEIDKIVDD 65 Query: 67862 LLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQG 68041 +L I+ S S + +P++ VK+KD +C+DYR+LN +T+ + +PIP I+DL D L G Sbjct: 66 MLASGTIQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDRFPIPLIEDLMDELGG 125 Query: 68042 ASVSPRL 68062 ++V ++ Sbjct: 126 SNVYSKI 132 Score = 54.3 bits (128), Expect = 3e-004 Identities = 35/82 (42%), Positives = 48/82 (57%), Gaps = 3/82 (3%) Frame = -3 Query: 37493 QSRHQSYADLRR*PLRFSVRDRLFLHVSPMKG---VMRFGRWGKLSPRYIGPFEILRIAG 37323 Q R + AD F V D +F+ + P + VMR + KLSP+Y GP++++ G Sbjct: 674 QHRMKQLADQHITEREFEVGDYVFVKLQPYRQQSVVMRSTQ--KLSPKYFGPYKVIDRCG 731 Query: 37322 EVAYELDLPPTFSAIHPVF*VSMRR 37248 EVAY+L LP S +HPVF VS R Sbjct: 732 EVAYKLQLPAN-SQVHPVFHVSQLR 755 Score = 51.2 bits (120), Expect = 0.002 Identities = 27/85 (31%), Positives = 39/85 (45%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVDF 58079 +G+L K ++ VP + TIL H S H G + +K F W M DI F Sbjct: 454 QGVLRRKNKIVVPNNSGIKDTILRWLHCSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQAF 513 Query: 58080 VAQCPNCQQVKYEHQRPGGTLKRMP 58154 + C CQQ K ++ G L+ +P Sbjct: 514 IRSCGTCQQCKSDNAASPGLLQPLP 538 Score = 44.5 bits (103), Expect(3) = 2e-049 Identities = 25/81 (30%), Positives = 45/81 (54%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IP+ +++D + L + GK VI V+V+RL+K+AHF+ + Y+ +A+ Y+ + Sbjct: 539 IPDRIWSDVSMDFIDGLPLSNGK-TVIMVVVDRLSKAAHFIALAHPYSAMTVAQAYLDNV 597 Query: 69673 VRLHGVSISIISDRGTKFMSH 69735 +LHG SI+ + H Sbjct: 598 FKLHGCPSSIVVSSRRVLVQH 618 Score = 35.2 bits (79), Expect(2) = 3e-049 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F AP++F LM F+ L FV++F DDIL+ +E Sbjct: 167 FGLTNAPASFQSLMNSFFKPFLRKFVLVFFDDILIYSTSME 207 >dbj|BAB10503.1| (AB013391) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1475 Score = 178 bits (446), Expect = 1e-041 Identities = 129/410 (31%), Positives = 197/410 (47%), Gaps = 17/410 (4%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H S + LF++ G +V L ++I G G + + + L TL +V YIP + N Sbjct: 455 HVSYDRNLFESLSDGLSNEVTLPTGSNVKIAGIGVIKLNSNL----TLKNVLYIPEFRLN 510 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIV---VARGTNSGTLY----TTLGCINMDV--- 5901 L+SV Q ++ +++ I + RG G LY +++ C ++D+ Sbjct: 511 LLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSVECTSVDINSS 570 Query: 5900 -----VAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVS 5736 +V S LWH+RLGH S + +L L D+ C C KQK +S Sbjct: 571 VTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHLS 630 Query: 5735 F-TKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFA 5559 F +K K + H D WGP + G ++++T + D+SR WVY +K +DV Sbjct: 631 FPSKNNMSENK--FDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQ 688 Query: 5558 TFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDER 5379 F + VE Q VK +RSDN E F A AKGI + P +QN + ER Sbjct: 689 IFPDFLKMVETQYGTLVKAVRSDNAPELR---FEALYQAKGIISYHSCPETPQQNSVVER 745 Query: 5378 MNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSH 5199 ++ + AR++ MP FW + + + +LINR P+ L K E+ K Y+ Sbjct: 746 KHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTS 805 Query: 5198 LRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 L+ FGC Y P++R+K +A C +GY S GY+ D + I V F E+ Sbjct: 806 LKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYET 865 Query: 5018 VM-YKDK 5001 V + DK Sbjct: 866 VFPFTDK 872 Score = 155 bits (387), Expect(2) = 1e-053 Identities = 72/134 (53%), Positives = 94/134 (69%), Gaps = 1/134 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T QQN VERKH+H+L VARAL++++ +P +WG+CIL+ +LINRL +L NK+ F++ Sbjct: 736 TPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFEL 795 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L+ K P Y+ LKVFGCLC+ T + KF PR +FLGYP GYK+LD T IH Sbjct: 796 LHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIH 855 Query: 65343 VSRDVSFYENVFPFT 65387 +SR V FYE VFPFT Sbjct: 856 ISRHVVFYETVFPFT 870 Score = 153 bits (382), Expect(2) = 1e-040 Identities = 89/212 (41%), Positives = 132/212 (61%), Gaps = 11/212 (5%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP ++ +A ++++ W AM+ E+ +LE +TW + LP GK+ + KWVF++K DG Sbjct: 959 EPCTYAQAKKIKE---WLDAMEIEIDALESTNTWSVCSLPQGKKPIGCKWVFKVKLNADG 1015 Query: 4605 K-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 RFKA LV KG DY + FSPV K+T+++ LL + A + L Q+D FL+ Sbjct: 1016 SLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSVAAIKEWSLHQLDISNAFLN 1075 Query: 4440 GDLDKEIYMQQPKGF------VVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 GDL +EIYM P G+ V+P ++ V KL +SLYGLKQA RQWY KF S + K F Sbjct: 1076 GDLKEEIYMTLPPGYSMKQGGVLP--QNPVLKLQKSLYGLKQASRQWYLKFSSTLKKLGF 1133 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDK 4150 K+ D + + +Y+ LL+Y+DD++I G++ L K Sbjct: 1134 KKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKK 1176 Score = 95.2 bits (233), Expect(2) = 2e-038 Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDN 87295 FLG LIS SKKQN + S+AE+EY A A+ ++ W+ + L++F +K + VP+FCD+ Sbjct: 1341 FLGDSLISWKSKKQNMASSSSAESEYRAMAMGSREIAWLVKLLAEFQVKQTKPVPLFCDS 1400 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 T+AI+I N V H+RTKH++ H RD +E+G + Q+AD+ T L Sbjct: 1401 TAAIHIANNAVFHERTKHIENDCHITRDRIEQGMLKTMHVDTTSQLADVLTKPL 1454 Score = 93.6 bits (229), Expect(2) = 2e-038 Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 1/140 (0%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQ-KLYRGMI 87720 I T G + Q+KY ELL+ + + P+ P+ KL ++ ++YR ++ Sbjct: 1198 IARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQHNDEHVIDNPEVYRRLV 1257 Query: 87719 GSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDL 87540 G L+YLT +RPDI +++ +F ++PK SH++A ++++ YLKGT LG++Y S+ L Sbjct: 1258 GKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGTIGLGLFYSSKSDLCL 1317 Query: 87539 VGYADVDYVGYLVDRKSTTGM 87477 Y D D+ + R+ST+G+ Sbjct: 1318 KAYTDADWGSCVDSRRSTSGI 1338 Score = 84.7 bits (206), Expect(2) = 1e-053 Identities = 45/116 (38%), Positives = 68/116 (57%), Gaps = 4/116 (3%) Frame = +1 Query: 64570 ERNLLYSYILLTK--KTFCVHC--LSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHV 64737 + ++L+ + L K K VHC + + FP KN S N+F DL+ +D W P+ Sbjct: 597 KNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKF-DLIHIDTWGPFAT 655 Query: 64738 LTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLE 64917 T GYKYFL IVDD+SR+TW L+ K++ LQ F+ +V Q+ +K++R+ N E Sbjct: 656 PTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPE 715 Score = 76.9 bits (186), Expect = 4e-011 Identities = 69/233 (29%), Positives = 105/233 (44%), Gaps = 10/233 (4%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 S W +DS + H++ ++ LF SL + + ++ V Sbjct: 442 SLNTWIIDSGATHHVSYDRNLFESLSDGLSNEVTLPTGSNVKIAGIGVIKLNSNLTLKNV 501 Query: 88389 YYVKGLIHNLLSISQLC-DKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 Y+ NLLS+SQ D + K+ F + + ++ + G + +Y +DTS++ Sbjct: 502 LYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSVE 561 Query: 88212 DKKL-VCLSVLEK-------DPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKV- 88060 + + SV EK D LWH RL H S + + L V+GLPK KED V Sbjct: 562 CTSVDINSSVTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHD---VLGLPKRN-KEDLVH 617 Query: 88059 CEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT* 87880 C C K SF SK +S +LIH+D GP + Y +VDDY+R T Sbjct: 618 CSICQKAKQKHLSFPSKNNMSEN-KFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATW 676 Query: 87879 RYM 87871 Y+ Sbjct: 677 VYL 679 Score = 71.4 bits (172), Expect(2) = 1e-022 Identities = 34/122 (27%), Positives = 62/122 (49%) Frame = +3 Query: 62679 MEHNIDQEPAVQIPVQNLAAGISNNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQ 62858 ++ N+++ P++ Q + + F + +S G+ +V V GT + SW + S Sbjct: 38 IQQNLNKRPSMYPFPQFDFSDAHYSPFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSL 97 Query: 62859 SVKNKTGFINGKIASPSPDSAAFALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWD 63038 KNK F++G + P +F +W RC+ MV SW NS+ K + ++ N+A +W Sbjct: 98 YAKNKIAFVDGTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWK 157 Query: 63039 EL 63044 +L Sbjct: 158 DL 159 Score = 64.4 bits (154), Expect(2) = 1e-022 Identities = 48/194 (24%), Positives = 83/194 (42%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 +L R+ N + Y L +I L Q + ++ YYT ++ L ++L S C Sbjct: 158 DLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDYYTALKTLWDDLDGASCVSTCKNCTCC 217 Query: 63220 VES*RCITLSKTDASFNSLWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPH 63399 + + I SK + L NE Y +R I++ +P +A+ +++L + R + Sbjct: 218 IATASMIEHSKIVKFLSGL--NESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNI--- 272 Query: 63400 GKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKC 63579 + + + NV+A S F N A + + +C GH D C Sbjct: 273 --VTMPTNASTFNVSAPQSDQFAVNLAKSFGTQP-------KPKVQCSHCGYTGHNADTC 323 Query: 63580 YKLSWFPIGFKVHK 63621 YK+ +P+GFK HK Sbjct: 324 YKIHGYPVGFK-HK 336 Score = 63.2 bits (151), Expect = 5e-007 Identities = 47/182 (25%), Positives = 85/182 (45%), Gaps = 4/182 (2%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLEC-IWERXXXXXXXXXXXXVEKGLLGS 515 +S W M +++ +NK+ +DG+ P+ +W R V K + S Sbjct: 86 FSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYKS 145 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFE-- 341 I+ A ++W +L RF+ + ++ L Q+I ++ QGT S+ Y++ K LW+ + Sbjct: 146 ILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDYYTALKTLWDDLDGA 205 Query: 340 -VVVPTPSCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMV 164 V +C C + ++ GLNESY RSQI++ P + + Y ++ Sbjct: 206 SCVSTCKNCTCCIATASMIEHSKIVKFLS--GLNESYSTIRSQIIMKKTIPDLAEIYNLL 263 Query: 163 MSDESK 146 D S+ Sbjct: 264 DQDHSQ 269 Score = 54.3 bits (128), Expect(2) = 3e-009 Identities = 30/80 (37%), Positives = 42/80 (52%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQ 64201 LP G VK+ IG LNS+LTL +L++ F+ NL+SV K I F+ C++Q Sbjct: 476 LPTGSNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQ 535 Query: 64202 GPSMKSPLEIGRAHNGLYFL 64261 P + + G GLY L Sbjct: 536 DPIKEQKIGRGNQIGGLYVL 555 Score = 43.4 bits (100), Expect(2) = 1e-040 Identities = 28/103 (27%), Positives = 51/103 (49%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L+ AF+++DLGP K LG++I+R + +++ Q Y ++L + +P T P+ Sbjct: 1178 LAKAFKLRDLGPMKYFLGLEIARTKEG--ISVCQRKYTMELLEDTGLLGCRPSTIPMEPS 1235 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 KLS+ ++ Y + L+ + + TRPD Y Sbjct: 1236 LKLSQHNDEHVIDNPE-----VYRRLVGKLMYLTI-TRPDITY 1272 Score = 36.4 bits (82), Expect(2) = 3e-009 Identities = 14/23 (60%), Positives = 21/23 (90%) Frame = +3 Query: 63912 VLSNNSWIIDSGASNHMTFDKTL 63980 VLS N+WIIDSGA++H+++D+ L Sbjct: 440 VLSLNTWIIDSGATHHVSYDRNL 462 >dbj|BAA92406.1| (AP001366) Similar to Arabidopsis thaliana chromosome II BAC F9O13 genomic sequence, putative retroelement pol polyprotein. (AC006248) [Oryza sativa] Length = 1330 Score = 217 bits (548), Expect = 2e-053 Identities = 129/417 (30%), Positives = 204/417 (47%), Gaps = 8/417 (1%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H + + F G G V D +EI+G+G V + + R+LD V YIP ++K Sbjct: 325 NHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDTVYYIPKLRK 384 Query: 6053 NLISVGQFDSTGYAAVFGKG--SWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSG 5880 N+ISVG+ D+ GY A G + + G+++ + LY I V + G Sbjct: 385 NIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASGG 444 Query: 5879 SCLW--HNRLGHMSAKGMKMLVAKGALEGLKSFDMG--LCESCVMGKQKRVSFTKTPREP 5712 W H R GH++ + ++ L + GL D LC+ C+ GKQ+R+ F + + Sbjct: 445 DTAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFR 504 Query: 5711 *KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEV 5532 + L++ H D+ GP ++ GG ++++ + D SR +W+ L + K+++ V Sbjct: 505 AQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGV 564 Query: 5531 ENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHA 5352 E +S K++ LR+D GGE+ F +CA G+R P +QNG+ ER N+ + A Sbjct: 565 ELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAA 624 Query: 5351 RSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTY 5172 RSM GMP FW V Y++NR P+ L E W + HLR FGC Y Sbjct: 625 RSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGY 684 Query: 5171 VHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV--MYKDKE 4998 V KL+ + + IGY YR +D R++ DV FDE+ ++D E Sbjct: 685 VKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVVRRVCVSRDVVFDEAATWAWRDPE 744 Query: 4997 QKVLE 4983 + E Sbjct: 745 TEATE 749 Score = 149 bits (373), Expect(2) = 5e-036 Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 5/186 (2%) Frame = -2 Query: 4800 LIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIK 4621 L+ EP S EA E + W AM +E++S+E N TW +LP G +A+ KWV+++K Sbjct: 842 LLASEEPMSLAEA---EQQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYKVK 898 Query: 4620 T*PDGKR-RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEK 4456 P G + KA LV KG D+ E+F+PV ++ ++R+L+ + A++ + MD K Sbjct: 899 KDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVK 958 Query: 4455 TVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFC 4276 + FL+GDL++E+Y+ QP GF+ GKE V +L ++LYGLKQAPR W K + + F Sbjct: 959 SAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLNFI 1018 Query: 4275 KAEKDPCCYFK 4243 K+E + Y + Sbjct: 1019 KSETESAVYVR 1029 Score = 102 bits (253), Expect = 6e-019 Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 3/150 (2%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G ++ Q Y ++L++ M+ P+ KL E G V+ +YR +GSL YL Sbjct: 1059 GVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLV 1118 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWY--LKGSNFDLVGYAD 87525 +RPD+ +SVG +RF P H AVK IL Y+ GT D+G W+ + L+G++D Sbjct: 1119 NTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLDVGCWFGRREKGELRLIGFSD 1178 Query: 87524 VDYVGYLVDRKSTTGMTHS-*DLVSSHRDQRNK 87429 D G L DRKSTTG+ + D + S + Q+ K Sbjct: 1179 SDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQK 1211 Score = 102 bits (251), Expect = 1e-018 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 1/126 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF-GLKIEQVPIFCDNT 87292 LG LIS S+KQ VALS+ EAEY+AA Q +W+ + L++ G Q + DN Sbjct: 1198 LGDSLISWQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNK 1257 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAIN+ KN V H R+KH+D R HF+R+ VEK QI++ + E+Q+ADI T + R F Sbjct: 1258 SAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLE 1317 Query: 87111 NRLELGM 87091 R ++G+ Sbjct: 1318 LRKKMGL 1324 Score = 86.2 bits (210), Expect = 6e-014 Identities = 41/129 (31%), Positives = 77/129 (58%), Gaps = 1/129 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ QQNG VER+++ ++ AR++L + +PA +WGE ++ Y++NR L+ + Sbjct: 605 YSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHE 664 Query: 65163 VLYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 + + P+ +L+VFGC+ + T+ + K + R T +F+GY + Y++ D +++ Sbjct: 665 AWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVVRRV 724 Query: 65340 HVSRDVSFYE 65369 VSRDV F E Sbjct: 725 CVSRDVVFDE 734 Score = 80.8 bits (196), Expect = 3e-012 Identities = 59/229 (25%), Positives = 101/229 (43%), Gaps = 5/229 (2%) Frame = -2 Query: 88572 ESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXG----RSDEH 88405 E + W++D+ + HMTG ++ F L+ D Sbjct: 312 EVTRDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHR 371 Query: 88404 SIDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDT 88225 S+D VYY+ L N++S+ +L + + V L +L+ K + I + Sbjct: 372 SLDTVYYIPKLRKNIISVGRL---DARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYI 428 Query: 88224 STIYDKKLVCLSVLEKDPLL-WHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEAC 88048 ++ VC++ D WH R H + L +L ++V GLP D++C+ C Sbjct: 429 LKLHIANPVCMAASGGDTAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHT-DQLCDGC 487 Query: 88047 TLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRN 87886 GK + F + + +LEL+H DLCGP+ + G + Y +LVDD +R+ Sbjct: 488 LAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRH 541 Score = 58.6 bits (139), Expect = 1e-005 Identities = 29/113 (25%), Positives = 57/113 (49%) Frame = -1 Query: 90085 SAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQDMITRFTTVINELISLG 89906 +AK WD ++ G +VR+ K ++E+ + K ++ ++ R T V+ ++ +G Sbjct: 48 TAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMRFKERETPEEFAMRLTAVVADIRDMG 107 Query: 89905 KVYTTEEQVDKVLRIFPRSWEIKVTAIREAKDLTNMTLDELVRNLKTYEMNVD 89747 V E K+LR+ P+ ++ ++ + D+ M L+ELV L T + D Sbjct: 108 GVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLSTVDSYSD 160 Score = 55.0 bits (130), Expect(2) = 2e-007 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C CL+ G+ + FP + + +L+ DL P T G KYFL++VDD SR Sbjct: 484 CDGCLA-GKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHM 542 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK--KRKNTP 64971 W +LL+ K IK F V + ++++RT G EF S E Y R+ Sbjct: 543 WIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRRELT 602 Query: 64972 KIMSIRTNKMVRLRENT 65022 S + N +V R T Sbjct: 603 APYSPQQNGVVERRNQT 619 Score = 31.3 bits (69), Expect(2) = 5e-036 Identities = 24/95 (25%), Positives = 39/95 (40%) Frame = -3 Query: 4124 DLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLSKEQS 3945 DLG LGM++ + + LSQ Y K+L + + P+ KL +E Sbjct: 1041 DLGLLSYYLGMEVVQKDDG--VFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESG 1098 Query: 3944 PKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 + V+ + + V + +V TRPD Y Sbjct: 1099 GEGVDSTMYRSTV-------GSLRYLVNTRPDLAY 1126 Score = 29.0 bits (63), Expect(2) = 2e-007 Identities = 12/39 (30%), Positives = 22/39 (55%) Frame = +2 Query: 64466 MNLNFYNPLMSCMSHGNSTDYLWHNRLGHVSFIKMKGIS 64582 + L+ NP+ S G T + WH R GH++F ++ ++ Sbjct: 429 LKLHIANPVCMAAS-GGDTAWRWHARFGHLNFQSLRRLA 466 >gb|AAG13423.1|AC051634_4 (AC051634) putative plant disease resistance polyprotein; 64427-67186 [Oryza sativa] Length = 894 Score = 216 bits (545), Expect = 3e-053 Identities = 105/268 (39%), Positives = 164/268 (61%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQL 56599 P++ PYR +P + E++ Q++E++ G I PS +P+ + VL VKKKD S+R C++YR+L Sbjct: 570 PVNCRPYRYSPLQKDEIEKQVKEMIDAGLITPSMSPYASPVLLVKKKDGSWRFCVDYRRL 629 Query: 56600 NKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEF 56779 N +T+K+K+ +P +D+ D + G FSK+DL +GY Q+++ T+ KTAF T G ++F Sbjct: 630 NALTIKSKFPMPVVDELLDELSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQF 689 Query: 56780 LVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXX 56959 V FGL NAP+ F LMN +F P++ FV+VF+D+IL+YS Sbjct: 690 RVMPFGLTNAPSTFQCLMNSVFAPFIRKFVLVFMDNILVYSPDLDSHLHHLQQVFVILRQ 749 Query: 56960 KNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASY 57139 L+AK KC F + +LG+++S GV D K A+ W PT+V+++ F+GL Y Sbjct: 750 HQLFAKRSKCTFACTQLEYLGYIISDKGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTGY 809 Query: 57140 YRRFI*VFSSIALQLTNLTKQNVPFIWS 57223 YR+F+ +S IA L L K+ F+W+ Sbjct: 810 YRKFVQGYSIIARPLILLLKKKA-FLWT 836 Score = 86.6 bits (211), Expect = 5e-014 Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 15/272 (5%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++++F +VF D +PP D I + P+ PYR +P + E++ Q++++++ Sbjct: 538 LLTDFDDVFH-DPKCLPPHRVFDHAIFLVPDATPVNCRPYRYSPLQKDEIEKQVKEMIDA 596 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVS 68053 I S+S + +P+L VK+KD C+DYR+LN +TI + +P+P +D+L D L G Sbjct: 597 GLITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALTIKSKFPMPVVDELLDELSGTKFF 656 Query: 68054 PRLT*DRAIIS*SLGRRISLRQLFK--------HVMAI-----TSF**CILN*L-TPMQL 68191 +L + + FK VM S C++N + P Sbjct: 657 SKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVFAPFIR 716 Query: 68192 LWT**IERSDNIWIPLLLYSLMIY*YNHAVRRNMSII*GPCLGF*RRKSFTRSFQSVRFG 68371 + + DNI L+YS + + H +++ I+ L R K Q G Sbjct: 717 KFV--LVFMDNI----LVYSPDLDSHLHHLQQVFVILRQHQLFAKRSKCTFACTQLEYLG 770 Query: 68372 LV-SKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISY 68509 + S + + DP+K + W P SV ++ FLGL GYYR+ + Y Sbjct: 771 YIISDKGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTGYYRKFVQGY 817 Score = 85.4 bits (208), Expect = 1e-013 Identities = 44/110 (40%), Positives = 65/110 (59%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 ++G FSK+DL++ YHQ+++ E D +KTAF+T +G ++F VM F LTNA +TF LMN Sbjct: 650 LSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNS 709 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKC 68361 F + + H HHL+ VF IL++ +L+ K SKC Sbjct: 710 VFAPFIRKFVLVFMDNILVYSPDLDSHLHHLQQVFVILRQHQLFAKRSKC 759 Score = 81.9 bits (199), Expect(2) = 2e-016 Identities = 41/98 (41%), Positives = 61/98 (61%), Gaps = 2/98 (2%) Frame = -1 Query: 39319 HELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPT 39140 H +L+ V LR +L+AK SKC F + + G+++S +G+ DP K A+ W PT Sbjct: 736 HLHHLQQVFVILRQHQLFAKRSKCTFACTQLEYLGYIISDKGVSTDPEKTAAMLAWPVPT 795 Query: 39139 SVTEVHSFVGLVSYYRRFVEGFSTSATH--LNLQDVSFMW 39026 SVTE+ F+GL YYR+FV+G+S A L L+ +F+W Sbjct: 796 SVTELRGFLGLTGYYRKFVQGYSIIARPLILLLKKKAFLW 835 Score = 33.2 bits (74), Expect(2) = 2e-016 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVILVELE 39324 F APS F LM +F + FV++FMD+ILV +L+ Sbjct: 694 FGLTNAPSTFQCLMNSVFAPFIRKFVLVFMDNILVYSPDLD 734 >dbj|BAA95819.1| (AP002069) Similar to Zea mays chromosome 4 22 kDa zein-associated intercluster region, copia-type pol polyprotein. (AF105716) [Oryza sativa] Length = 925 Score = 169 bits (424), Expect(2) = 1e-051 Identities = 81/139 (58%), Positives = 101/139 (72%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 TP+GT++HQ KY K+LL+RFKM++ K I TPI LD + G V+QK YR MIGSLL Sbjct: 727 TPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQKEYRSMIGSLL 786 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YLTASRPDI F+V LCARFQ +P+ SH QAVKRI+ YL T + G+WY S+ L GY+ Sbjct: 787 YLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYSTSSSICLSGYS 846 Query: 87527 DVDYVGYLVDRKSTTGMTH 87471 D D+ GY +DRKST+G H Sbjct: 847 DADFGGYRIDRKSTSGTCH 865 Score = 135 bits (337), Expect = 8e-029 Identities = 111/404 (27%), Positives = 181/404 (44%), Gaps = 13/404 (3%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYL---ADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGI 6060 H + K F + K + + + A A+ G V K L+N ++D++Y Sbjct: 33 HMTGDKNWFSSLKNASKTESIIFGDAATSAVLATGLVKVNEKFELKNVALVEDLKY---- 88 Query: 6059 KKNLISVGQFDSTGYAAVFGKGSWKIVKG----VIVVARGTN--SGTLYTTLGCINMDVV 5898 NL+SV Q + F K K+ V+ ++R + + +V Sbjct: 89 --NLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVLNISRYGRVFKADFENPVSPVITCLV 146 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGL----KSFDMGLCESCVMGKQKRVSFT 5730 A+ WH RLGH+ + L + GL K D+ +C C K S Sbjct: 147 AKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDL-VCTPCCHAKMVSTSHA 205 Query: 5729 KTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFK 5550 ++ H D G + V S+GG + + + DFSR WV+F+ + F F+ Sbjct: 206 PIVSMMTDAPGQLLHMDTVGSARVQSVGGKWYVLVIVDDFSRYSWVFFMATKDEAFQYFR 265 Query: 5549 KWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNK 5370 +E + +KR+RSDNGGE+ + F FC +G+ + P +QNG+ ER N+ Sbjct: 266 GLFLRLELEFPGSLKRIRSDNGGEFKNASFEQFCNERGLEHEFSSPRVPQQNGVVERKNR 325 Query: 5369 ILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRT 5190 +L E AR+M + FWA ++T Y+ NR K E+ + K SHL Sbjct: 326 VLVEMARTMLDEYVI---FWAEAINTACYISNRVFLRSKLGKTSYELRFGHQPKVSHLCV 382 Query: 5189 FGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 FGC +V + +K ++ +GY ++ GYR KI+ C+V+F+E+ Sbjct: 383 FGCKCFV-LKSGNLDKFEARSTDGLFLGYPAHTSGYRVLILGTNKIVETCEVSFNEA 438 Score = 122 bits (303), Expect = 8e-025 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 2/230 (0%) Frame = -2 Query: 88578 VRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEH-S 88402 V + W +DS CSRHMTG+K F SL+ + +E Sbjct: 17 VARKENVWIVDSGCSRHMTGDKNWFSSLKNASKTESIIFGDAATSAVLATGLVKVNEKFE 76 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTS 88222 + V V+ L +NLLS+SQ+ D+ +V F+ TG +V + ++ I + + ++ D Sbjct: 77 LKNVALVEDLKYNLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVLNISRYGR-VFKADFE 135 Query: 88221 TIYDKKLVCL-SVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACT 88045 + CL + +KD + WH+RL H L +L DLV GLPK K D VC C Sbjct: 136 NPVSPVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLVCTPCC 195 Query: 88044 LGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 K + +S + + +L+HMD G RVQS G K YV V+VDD++R Sbjct: 196 HAKMVSTSHAPIVSMMTDAPGQLLHMDTVGSARVQSVGGKWYVLVIVDDFSR 247 Score = 98.3 bits (241), Expect(3) = 1e-027 Identities = 53/126 (42%), Positives = 77/126 (61%) Frame = +3 Query: 64992 QQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQVLY 65171 QQNG VERK++ L+E+AR +L + + +W E I T Y+ NR+ K +++ + Sbjct: 315 QQNGVVERKNRVLVEMARTMLDEYVI---FWAEAINTACYISNRVFLRSKLGKTSYELRF 371 Query: 65172 NK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIHVSR 65351 P S+L VFGC CF + + DKFE R+T +FLGYP +T+GY+VL T KI + Sbjct: 372 GHQPKVSHLCVFGCKCFVLKSGNLDKFEARSTDGLFLGYPAHTSGYRVLILGTNKIVETC 431 Query: 65352 DVSFYE 65369 +VSF E Sbjct: 432 EVSFNE 437 Score = 70.2 bits (169), Expect(2) = 9e-015 Identities = 30/79 (37%), Positives = 51/79 (63%) Frame = -2 Query: 4428 KEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCY 4249 +E+Y++QP GF P + V KL+++LYGLKQAPR WY + +F+ F + D + Sbjct: 610 EEVYIKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLF 669 Query: 4248 FKKYTNSYVFLLLYLDDML 4192 KY ++ +F+ +Y+DD++ Sbjct: 670 VLKYGDNQLFVQIYVDDII 688 Score = 64.0 bits (153), Expect(2) = 1e-051 Identities = 29/52 (55%), Positives = 40/52 (76%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ 87316 FLG+ LI+ S+KQ+SVA STAE+EYVAAA CC+Q+LW+ L D+ L + + Sbjct: 866 FLGTSLIAWSSRKQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYSLTLRK 917 Score = 43.8 bits (101), Expect(3) = 1e-027 Identities = 30/101 (29%), Positives = 45/101 (43%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C C ++T PI + + LL +D V + G Y L+IVDDFSR + Sbjct: 191 CTPCCHAKMVSTSHAPIVSMMTDAPG-QLLHMDTVGSARVQSVGGKWYVLVIVDDFSRYS 249 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEF 64920 W + K Q + + +F ++K IR+ NG EF Sbjct: 250 WVFFMATKDEAFQYFRGLFLRLELEFPGSLKRIRSDNGGEF 290 Score = 39.1 bits (89), Expect(2) = 9e-015 Identities = 22/96 (22%), Positives = 48/96 (49%) Frame = -3 Query: 4136 FEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLS 3957 FEM +G LG++I + ++ Q Y + +L RF++ + KP +TP+ + L Sbjct: 708 FEMSMMGELSYFLGLQIKQTPQGTFVH--QTKYTKDLLRRFKMENCKPISTPIGSTAVLD 765 Query: 3956 KEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 ++ + V+++ + +++ L + +RPD Sbjct: 766 PDEDGEAVDQKEYRSMIGSLL-------YLTASRPD 794 Score = 30.9 bits (68), Expect(3) = 1e-027 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = +2 Query: 64475 NFYNPLMSCMSHGNSTDYL-WHNRLGHVSFIKMKGISSIHI-----SFSPKKHFVCTVC 64633 N +P+++C+ D + WH RLGHV F + +S + + VCT C Sbjct: 136 NPVSPVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLVCTPC 194 >emb|CAB10225.1| (Z97336) retrovirus-related like polyprotein [Arabidopsis thaliana] Length = 1489 Score = 156 bits (391), Expect(4) = 1e-051 Identities = 73/139 (52%), Positives = 99/139 (70%), Gaps = 1/139 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQN VERKH+H+L VARALL+QS +P +YW +C+ T +LINRL + +L+NK+ ++ Sbjct: 726 YTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYE 785 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 ++ NK P YS LK FGCLCF + N+H + KF PR +FLGYP GYKVLD + + Sbjct: 786 LILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSV 845 Query: 65340 HVSRDVSFYENVFPFTLFEV 65399 VSR+V F E+VFPF E+ Sbjct: 846 TVSRNVVFKEHVFPFKTSEL 865 Score = 139 bits (348), Expect(2) = 2e-031 Identities = 85/218 (38%), Positives = 122/218 (54%), Gaps = 9/218 (4%) Frame = -2 Query: 4791 EGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*P 4612 E EP++F +A++ E KW +E++++E N TW + LP K + KWVF IK P Sbjct: 1020 ETEPKTFSQAMKSE---KWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNP 1076 Query: 4611 DGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 DG R+KA LV +G D+ + FSPV KLTS +++L + A L QMD F Sbjct: 1077 DGTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAF 1136 Query: 4446 LHGDLDKEIYMQQPKGFVVPG----KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 LHGDLD+EI+M P+G+ P + VC+L +S+YGLKQA RQWYK+F Sbjct: 1137 LHGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKRF--------- 1187 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVVCS 4138 V L+Y+DD++I ++ E NL ++ S Sbjct: 1188 ------------------VAALVYIDDIMIASNNDAEVENLKALLRS 1216 Score = 139 bits (347), Expect = 6e-030 Identities = 101/358 (28%), Positives = 164/358 (45%), Gaps = 20/358 (5%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFDST-----------------GYAAVFGKGSWKIVKGVIVV 5961 L +V ++P K NL+SV T + G+G ++ + ++ Sbjct: 517 LHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRG--RLYHNLYIL 574 Query: 5960 ARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM 5781 S + T C+ V ++ LWH RLGH S Sbjct: 575 ETENTSPSTSTPAACLFTGSV---LNDGHLWHQRLGHPS--------------------- 610 Query: 5780 GLCESCVMGKQKR---VSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDF 5610 S V+ K KR +S P + H D+WGP + S+ G R+++T + D Sbjct: 611 ----SVVLQKLKRLAYISHNNLASNP----FDLVHLDIWGPFSIESIEGFRYFLTVVDDC 662 Query: 5609 SRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIR 5430 +R WVY L++ DV + F ++ V Q + K+K +RSDN E FT G+ Sbjct: 663 TRTTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELG---FTEIVKEHGML 719 Query: 5429 LMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLG 5250 + +QN + ER ++ + AR++ +P +W++ V+T +LINR PS L Sbjct: 720 HHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLN 779 Query: 5249 FKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWD 5070 K E+ + K+ YS L+ FGC +V + +R K +A C +GY S GY+ D Sbjct: 780 NKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLD 839 Query: 5069 DKNRKILRHCDVTFDESV 5016 ++ + +V F E V Sbjct: 840 LESHSVTVSRNVVFKEHV 857 Score = 87.4 bits (213), Expect(2) = 1e-025 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Frame = +3 Query: 62751 NAFYMHPSESAGSAIVP-LVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAF 62927 N +Y+H ++ AG +V + + +HSW R IL + +V+NK GFING I P D F Sbjct: 32 NPYYLHSADHAGLILVSDRLTTASDFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDF 91 Query: 62928 ALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDELI 63047 W RC+D+V++W NS+ K + +L Y+ + +W+ L+ Sbjct: 92 GAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLL 131 Score = 81.5 bits (198), Expect(2) = 2e-025 Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDN 87295 +LG+ LIS SKKQ + S+ E+EY + A +++W++Q L D + + +FCDN Sbjct: 1350 YLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQLLKDLHIPLTCPAKLFCDN 1409 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 SA++ N V H+RTKH++I H +RD ++ G + E Q ADI T +L Sbjct: 1410 KSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKALHVPTENQHADILTKAL 1463 Score = 74.9 bits (181), Expect = 2e-010 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 6/180 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLEC-IWERXXXXXXXXXXXXVEKGLLGS 515 + W R + +A+ RNK+G ++G+ K + W R V+K + S Sbjct: 57 FHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQS 116 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 ++Y +W NL RF + D F++ Q+++ I QG+ + Y++ LWE+ Sbjct: 117 LLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRNY 176 Query: 334 VPTP-----SCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYL 170 V P CEC+ + ++ L LNE + R IL++ P P + +A+ Sbjct: 177 VELPVCTCGRCECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAFN 236 Query: 169 MVMSDE 152 MV DE Sbjct: 237 MVTQDE 242 Score = 70.6 bits (170), Expect(4) = 1e-051 Identities = 33/82 (40%), Positives = 49/82 (59%) Frame = +1 Query: 64672 NTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSF 64851 N +SN F DL+ LD+W P+ + + G++YFL +VDD +R+TW +L K + F Sbjct: 626 NNLASNPF-DLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKDVSSVFPEF 684 Query: 64852 VSLVGNQFRVTIKSIRTYNGLE 64917 + LV QF IK+IR+ N E Sbjct: 685 IKLVSTQFNAKIKAIRSDNAPE 706 Score = 63.6 bits (152), Expect(2) = 2e-025 Identities = 31/85 (36%), Positives = 49/85 (57%) Frame = -3 Query: 87734 YRGMIGSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKG 87555 YR +IG LLYLT +RPDI ++V ++F + P + H+QA ++L Y+K G+ Y Sbjct: 1262 YRKLIGRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSAD 1321 Query: 87554 SNFDLVGYADVDYVGYLVDRKSTTG 87480 L G++D D+ R+S +G Sbjct: 1322 YEICLNGFSDADWAACKDTRRSISG 1346 Score = 58.6 bits (139), Expect(2) = 1e-025 Identities = 51/191 (26%), Positives = 87/191 (44%), Gaps = 15/191 (7%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 NL R+ Q + +++ + +++ + Q ++D+++YYT + L EE +V V Sbjct: 129 NLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRN-------YVELPV 181 Query: 63220 VES*RCITLSKTDASFNSLW---------------LNEVYMIVRGSILIMTPLPTMAQAF 63354 RC + DA+ W LNE + R IL++ P+PT+ +AF Sbjct: 182 CTCGRC----ECDAAVK--WEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAF 235 Query: 63355 SILA*EERPREVKPHGKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNI 63534 +++ +ER R VKP V+ A +T+ P + Sbjct: 236 NMVTQDERQRNVKP---------LTRVDSVAFQNTSMINEDENAYVAAYNTVRPNQKP-- 284 Query: 63535 FGEYCKNVGHAKDKCYKLSWFPIGFK 63612 +C VGH KCYK+ +P G K Sbjct: 285 ICTHCGKVGHTIQKCYKVHGYPPGMK 310 Score = 41.4 bits (95), Expect = 2.0 Identities = 26/68 (38%), Positives = 33/68 (48%) Frame = +2 Query: 64058 GDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGPSMKSPLEIGR 64237 G + L LH +L V FKFNL+SV SLV F CL+Q S + GR Sbjct: 507 GTVHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGR 566 Query: 64238 AHNGLYFL 64261 ++ LY L Sbjct: 567 LYHNLYIL 574 Score = 25.4 bits (54), Expect(2) = 2e-031 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGM 4092 L + F++KDLGPA+ LG+ Sbjct: 1214 LRSEFKIKDLGPARFFLGL 1232 Score = 25.4 bits (54), Expect(4) = 1e-051 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Frame = +2 Query: 64496 SCMSHGN--STDYLWHNRLGHVSFIKMKGISSI 64588 +C+ G+ + +LWH RLGH S + ++ + + Sbjct: 588 ACLFTGSVLNDGHLWHQRLGHPSSVVLQKLKRL 620 Score = 21.6 bits (44), Expect(4) = 1e-051 Identities = 7/16 (43%), Positives = 10/16 (61%) Frame = +2 Query: 64946 LKKKGKIHQRSCPYAP 64993 +K+ G +H SC Y P Sbjct: 713 VKEHGMLHHFSCAYTP 728 >emb|CAB78488.1| (AL161539) retrovirus-related like polyprotein [Arabidopsis thaliana] Length = 1489 Score = 156 bits (391), Expect(4) = 1e-051 Identities = 73/139 (52%), Positives = 99/139 (70%), Gaps = 1/139 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQN VERKH+H+L VARALL+QS +P +YW +C+ T +LINRL + +L+NK+ ++ Sbjct: 726 YTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYE 785 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 ++ NK P YS LK FGCLCF + N+H + KF PR +FLGYP GYKVLD + + Sbjct: 786 LILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSV 845 Query: 65340 HVSRDVSFYENVFPFTLFEV 65399 VSR+V F E+VFPF E+ Sbjct: 846 TVSRNVVFKEHVFPFKTSEL 865 Score = 139 bits (348), Expect(2) = 2e-031 Identities = 85/218 (38%), Positives = 122/218 (54%), Gaps = 9/218 (4%) Frame = -2 Query: 4791 EGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*P 4612 E EP++F +A++ E KW +E++++E N TW + LP K + KWVF IK P Sbjct: 1020 ETEPKTFSQAMKSE---KWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNP 1076 Query: 4611 DGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 DG R+KA LV +G D+ + FSPV KLTS +++L + A L QMD F Sbjct: 1077 DGTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAF 1136 Query: 4446 LHGDLDKEIYMQQPKGFVVPG----KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 LHGDLD+EI+M P+G+ P + VC+L +S+YGLKQA RQWYK+F Sbjct: 1137 LHGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKRF--------- 1187 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVVCS 4138 V L+Y+DD++I ++ E NL ++ S Sbjct: 1188 ------------------VAALVYIDDIMIASNNDAEVENLKALLRS 1216 Score = 139 bits (347), Expect = 6e-030 Identities = 101/358 (28%), Positives = 164/358 (45%), Gaps = 20/358 (5%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFDST-----------------GYAAVFGKGSWKIVKGVIVV 5961 L +V ++P K NL+SV T + G+G ++ + ++ Sbjct: 517 LHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRG--RLYHNLYIL 574 Query: 5960 ARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM 5781 S + T C+ V ++ LWH RLGH S Sbjct: 575 ETENTSPSTSTPAACLFTGSV---LNDGHLWHQRLGHPS--------------------- 610 Query: 5780 GLCESCVMGKQKR---VSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDF 5610 S V+ K KR +S P + H D+WGP + S+ G R+++T + D Sbjct: 611 ----SVVLQKLKRLAYISHNNLASNP----FDLVHLDIWGPFSIESIEGFRYFLTVVDDC 662 Query: 5609 SRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIR 5430 +R WVY L++ DV + F ++ V Q + K+K +RSDN E FT G+ Sbjct: 663 TRTTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELG---FTEIVKEHGML 719 Query: 5429 LMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLG 5250 + +QN + ER ++ + AR++ +P +W++ V+T +LINR PS L Sbjct: 720 HHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLN 779 Query: 5249 FKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWD 5070 K E+ + K+ YS L+ FGC +V + +R K +A C +GY S GY+ D Sbjct: 780 NKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLD 839 Query: 5069 DKNRKILRHCDVTFDESV 5016 ++ + +V F E V Sbjct: 840 LESHSVTVSRNVVFKEHV 857 Score = 87.4 bits (213), Expect(2) = 1e-025 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Frame = +3 Query: 62751 NAFYMHPSESAGSAIVP-LVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAF 62927 N +Y+H ++ AG +V + + +HSW R IL + +V+NK GFING I P D F Sbjct: 32 NPYYLHSADHAGLILVSDRLTTASDFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDF 91 Query: 62928 ALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDELI 63047 W RC+D+V++W NS+ K + +L Y+ + +W+ L+ Sbjct: 92 GAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLL 131 Score = 81.5 bits (198), Expect(2) = 2e-025 Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDN 87295 +LG+ LIS SKKQ + S+ E+EY + A +++W++Q L D + + +FCDN Sbjct: 1350 YLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQLLKDLHIPLTCPAKLFCDN 1409 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 SA++ N V H+RTKH++I H +RD ++ G + E Q ADI T +L Sbjct: 1410 KSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKALHVPTENQHADILTKAL 1463 Score = 74.9 bits (181), Expect = 2e-010 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 6/180 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLEC-IWERXXXXXXXXXXXXVEKGLLGS 515 + W R + +A+ RNK+G ++G+ K + W R V+K + S Sbjct: 57 FHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQS 116 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 ++Y +W NL RF + D F++ Q+++ I QG+ + Y++ LWE+ Sbjct: 117 LLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRNY 176 Query: 334 VPTP-----SCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYL 170 V P CEC+ + ++ L LNE + R IL++ P P + +A+ Sbjct: 177 VELPVCTCGRCECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAFN 236 Query: 169 MVMSDE 152 MV DE Sbjct: 237 MVTQDE 242 Score = 70.6 bits (170), Expect(4) = 1e-051 Identities = 33/82 (40%), Positives = 49/82 (59%) Frame = +1 Query: 64672 NTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSF 64851 N +SN F DL+ LD+W P+ + + G++YFL +VDD +R+TW +L K + F Sbjct: 626 NNLASNPF-DLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKDVSSVFPEF 684 Query: 64852 VSLVGNQFRVTIKSIRTYNGLE 64917 + LV QF IK+IR+ N E Sbjct: 685 IKLVSTQFNAKIKAIRSDNAPE 706 Score = 63.6 bits (152), Expect(2) = 2e-025 Identities = 31/85 (36%), Positives = 49/85 (57%) Frame = -3 Query: 87734 YRGMIGSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKG 87555 YR +IG LLYLT +RPDI ++V ++F + P + H+QA ++L Y+K G+ Y Sbjct: 1262 YRKLIGRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSAD 1321 Query: 87554 SNFDLVGYADVDYVGYLVDRKSTTG 87480 L G++D D+ R+S +G Sbjct: 1322 YEICLNGFSDADWAACKDTRRSISG 1346 Score = 58.6 bits (139), Expect(2) = 1e-025 Identities = 51/191 (26%), Positives = 87/191 (44%), Gaps = 15/191 (7%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 NL R+ Q + +++ + +++ + Q ++D+++YYT + L EE +V V Sbjct: 129 NLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRN-------YVELPV 181 Query: 63220 VES*RCITLSKTDASFNSLW---------------LNEVYMIVRGSILIMTPLPTMAQAF 63354 RC + DA+ W LNE + R IL++ P+PT+ +AF Sbjct: 182 CTCGRC----ECDAAVK--WEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAF 235 Query: 63355 SILA*EERPREVKPHGKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNI 63534 +++ +ER R VKP V+ A +T+ P + Sbjct: 236 NMVTQDERQRNVKP---------LTRVDSVAFQNTSMINEDENAYVAAYNTVRPNQKP-- 284 Query: 63535 FGEYCKNVGHAKDKCYKLSWFPIGFK 63612 +C VGH KCYK+ +P G K Sbjct: 285 ICTHCGKVGHTIQKCYKVHGYPPGMK 310 Score = 41.4 bits (95), Expect = 2.0 Identities = 26/68 (38%), Positives = 33/68 (48%) Frame = +2 Query: 64058 GDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGPSMKSPLEIGR 64237 G + L LH +L V FKFNL+SV SLV F CL+Q S + GR Sbjct: 507 GTVHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGR 566 Query: 64238 AHNGLYFL 64261 ++ LY L Sbjct: 567 LYHNLYIL 574 Score = 25.4 bits (54), Expect(2) = 2e-031 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGM 4092 L + F++KDLGPA+ LG+ Sbjct: 1214 LRSEFKIKDLGPARFFLGL 1232 Score = 25.4 bits (54), Expect(4) = 1e-051 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Frame = +2 Query: 64496 SCMSHGN--STDYLWHNRLGHVSFIKMKGISSI 64588 +C+ G+ + +LWH RLGH S + ++ + + Sbjct: 588 ACLFTGSVLNDGHLWHQRLGHPSSVVLQKLKRL 620 Score = 21.6 bits (44), Expect(4) = 1e-051 Identities = 7/16 (43%), Positives = 10/16 (61%) Frame = +2 Query: 64946 LKKKGKIHQRSCPYAP 64993 +K+ G +H SC Y P Sbjct: 713 VKEHGMLHHFSCAYTP 728 >dbj|BAA92703.1| (AB036885) reverse transcriptase [Tricholoma magnivelare] Length = 393 Score = 153 bits (384), Expect(2) = 2e-051 Identities = 92/249 (36%), Positives = 136/249 (53%), Gaps = 1/249 (0%) Frame = +2 Query: 56501 GFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVF 56680 G IRPS +P + FVKKKD S +YR+LN +T+KN Y +P I + + ++GA F Sbjct: 1 GRIRPSKSPMASPFFFVKKKDGSLSPVQDYRRLNDITVKNHYPLPLISELVNQLRGAQYF 60 Query: 56681 SKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKP-YL 56857 +K+D+ GY ++I + K AF T CG +E LV FGL N+PA F +MN IF L Sbjct: 61 TKLDVHWGYNNVRIKEGDEWKAAFCTNCGLFEPLVMFFGLTNSPATFQTMMNNIFHDLIL 120 Query: 56858 ELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSK 57037 E V +++DDILI++ + K LY + KCEF + +LG ++S+ Sbjct: 121 EGVVCIYLDDILIFTCTIKEHRRITRLVLERLRQYKLYLRQDKCEFEKTKIEYLGLIISE 180 Query: 57038 DGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFI 57217 V +D K+ V W PTN +V F+G ++Y RFI FS A L +LT + + Sbjct: 181 GQVEMDPVKVNGVTAWPMPTNKKEVQPFLGFINFYWRFIKDFSHHARPLFDLTGKEA-WR 239 Query: 57218 WSGECEESFQ 57247 W + +F+ Sbjct: 240 WDNAQQGAFE 249 Score = 148 bits (369), Expect = 1e-032 Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 10/244 (4%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH R+VL+ LR +LY + KCEF + + G ++S+ + +DP+K+ + W P Sbjct: 140 EHRRITRLVLERLRQYKLYLRQDKCEFEKTKIEYLGLIISEGQVEMDPVKVNGVTAWPMP 199 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHL--NLQDVSFMWLVKCDMSFLKLKELITSAP 38969 T+ EV F+G +++Y RF++ FS A L ++ W +F KLKE++TSAP Sbjct: 200 TNKKEVQPFLGFINFYWRFIKDFSHHARPLFDLTGKEAWRWDNAQQGAFEKLKEMVTSAP 259 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WF-IDYVSRELKVHELNYPTRDLEL 38807 ILT + F + D+S + VL +Q W + + S+ L E NY D E+ Sbjct: 260 ILTFADDSRPFHVEADSSDFAMGAVLSQQSPEDQKWHPVVFYSKSLSAVERNYEIHDKEI 319 Query: 38806 AVIVFALMIWRHYLYGVQY--ETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 I+ AL WRH+L G Q+ E + DH +L+ M + LN RW L +D S+ +H Sbjct: 320 LAIMGALEEWRHFLEGAQHKVEIWMDHKNLEYFMTAKKLNRHQARWSLYLSRFDFSLHHH 379 Query: 38632 PGKKNMVAYSLSRK 38591 PG+ +LSR+ Sbjct: 380 PGRSMGKTDALSRR 393 Score = 78.8 bits (191), Expect(2) = 2e-051 Identities = 44/116 (37%), Positives = 68/116 (57%), Gaps = 8/116 (6%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ER------NVITYASRQLKVHEHNYPTHDLDLAAVVFALKQW 57468 F V D S +GAVL + + + + S+ L E NY HD ++ A++ AL++W Sbjct: 270 FHVEADSSDFAMGAVLSQQSPEDQKWHPVVFYSKSLSAVERNYEIHDKEILAIMGALEEW 329 Query: 57469 RHYLYGV--KCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADA 57642 RH+L G K E++ DH++L Y T K LN + RW L D ++ +H G++ DA Sbjct: 330 RHFLEGAQHKVEIWMDHKNLEYFMTAKKLNRHQARWSLYLSRFDFSLHHHPGRSMGKTDA 389 Query: 57643 LSRK 57654 LSR+ Sbjct: 390 LSRR 393 Score = 66.3 bits (159), Expect = 6e-008 Identities = 49/206 (23%), Positives = 93/206 (44%), Gaps = 9/206 (4%) Frame = +2 Query: 68372 LVSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX* 68551 ++S+ + +DP K+ + W P + ++ FLG +Y R + + Sbjct: 177 IISEGQVEMDPVKVNGVTAWPMPTNKKEVQPFLGFINFYWRFIKDFSHHARPLFDLTGKE 236 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVL-LYIDASQIGLGCVLMQ------KGK 68710 + + F+ + + R + D+S +G VL Q K Sbjct: 237 AWRWDNAQQGAFEKLKEMVTSAPILTFADDSRPFHVEADSSDFAMGAVLSQQSPEDQKWH 296 Query: 68711 VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAV--FTNHRSLQYIFNQR 68884 V + S+ L E+ Y IHD E++ ++ AL+ W ++L G V + +H++L+Y + Sbjct: 297 PVVFYSKSLSAVERNYEIHDKEILAIMGALEEWRHFLEGAQHKVEIWMDHKNLEYFMTAK 356 Query: 68885 DLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 L + W L +D ++ +HPG++ DALS Sbjct: 357 KLNRHQARWSLYLSRFDFSLHHHPGRSMGKTDALS 391 Score = 64.4 bits (154), Expect(2) = 8e-017 Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 12/215 (5%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AF 68217 G F+K+D+ Y+ ++++E D K AF T G +E LVM+F LTN+ ATF +MN F Sbjct: 56 GAQYFTKLDVHWGYNNVRIKEGDEWKAAFCTNCGLFEPLVMFFGLTNSPATFQTMMNNIF 115 Query: 68218 RQYXXXXXX-XXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYH 68394 C +EH R V L++ KLY + KCE + + Y Sbjct: 116 HDLILEGVVCIYLDDILIFTCTIKEHRRITRLVLERLRQYKLYLRQDKCE-FEKTKIEYL 174 Query: 68395 G----GSEKD*DN*RLD*TCF--SYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT* 68541 G + + D +++ ++ K ++P Y DF A L LT Sbjct: 175 GLIISEGQVEMDPVKVNGVTAWPMPTNKKEVQPFLGFINFYWRFIKDFSHHARPLFDLTG 234 Query: 68542 KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY*CFSDWS 68682 KE + W + + +F+KLK +T+A ILT + F V SD++ Sbjct: 235 KE-AWRWDNAQQGAFEKLKEMVTSAPILTFADDSRPFHVEADSSDFA 280 Score = 51.9 bits (122), Expect(2) = 8e-017 Identities = 27/61 (44%), Positives = 37/61 (60%) Frame = +2 Query: 67880 IRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPR 68059 IR S S +P FVK+KD + DYR+LN IT+ N YP+P I +L + L+GA + Sbjct: 3 IRPSKSPMASPFFFVKKKDGSLSPVQDYRRLNDITVKNHYPLPLISELVNQLRGAQYFTK 62 Query: 68060 L 68062 L Sbjct: 63 L 63 >emb|CAA86713.1| (Z46728) YI9910.15, incomplete TY3-2 orfB, len: >1099, CAI: 0.13 [Saccharomyces cerevisiae] Length = 1099 Score = 210 bits (530), Expect = 2e-051 Identities = 162/554 (29%), Positives = 263/554 (47%), Gaps = 11/554 (1%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L VL+ L+++ L K KC+F + F G+ + + I K AI + P Sbjct: 508 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 567 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQ--DVSFMWLVKCDMSFLKLKELITSAP 38969 +V + F+G+++YYRRF+ S A + L D S W K D + KLK + ++P Sbjct: 568 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS-QWTEKQDKAIEKLKAALCNSP 626 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLM------KQGWFIDYVSRELKVHELNYPTRDLEL 38807 +L + + DAS G+ VL K + Y S+ L+ + NYP +LEL Sbjct: 627 VLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 686 Query: 38806 AVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPG 38627 I+ AL +R+ L+G + TDH+SL + + + R RW++ L YD ++ Y G Sbjct: 687 LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 746 Query: 38626 KKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG--VQ 38453 KN+VA ++SR ++ + P RP+ + S + D S VL +M Q Sbjct: 747 PKNVVADAISRA--IYTITPE---TSRPIDTE---SWKSYYKSDPLCS-AVLIHMKELTQ 797 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF-DGVLKFSGRISVPTVGDSIQLIL 38276 ++ + A S + ++ + + D ++ + R+ VP + + L Sbjct: 798 HNVTPEDMS------AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRL 851 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 H + H G + Y W ++ I ++ C+ Q +K R G + Sbjct: 852 YHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 910 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I+E +W I+MDFV GLP TS ++ I V+VD+ +K AHF+ + +L + Sbjct: 911 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 970 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 + +HG P +I SDR + T+ LG + +S+A HPQTD QSE TIQ L + Sbjct: 971 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1030 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNS 37661 L V + P +F YNS Sbjct: 1031 LRAYVSTNIQNWHVYLPQIEFVYNS 1055 Score = 152 bits (379), Expect = 1e-033 Identities = 88/249 (35%), Positives = 132/249 (52%) Frame = +2 Query: 56429 IPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKV 56608 + PY + +E+ +Q+LL FI PS +P + V+ V KKD +FR+C++YR LNK Sbjct: 348 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 407 Query: 56609 TLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVK 56788 T+ + + +P ID+ + A +F+ +DL SGY Q+ + + KTAF T G YE+ V Sbjct: 408 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 467 Query: 56789 SFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNL 56968 FGL NAP+ F M F+ FV V++DDILI+S+S + +NL Sbjct: 468 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 525 Query: 56969 YAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 K KC+F FLG+ + + K A++ + P V F+G+ +YYRR Sbjct: 526 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 585 Query: 57149 FI*VFSSIA 57175 FI S IA Sbjct: 586 FIPNCSKIA 594 Score = 91.7 bits (224), Expect = 1e-015 Identities = 51/147 (34%), Positives = 79/147 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 I++D V L T ++I V+V+R +K AHF+ + T + +L + R I HG Sbjct: 921 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 980 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 +I SDR + + + + K LG + +S+ HPQTD QSE IQ L +L A V Sbjct: 981 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQ 1040 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFE 69957 +W +LP +EF YN++ + +PFE Sbjct: 1041 NWHVYLPQIEFVYNSTPTRTLGKSPFE 1067 Score = 78.4 bits (190), Expect(3) = 1e-039 Identities = 67/194 (34%), Positives = 98/194 (49%), Gaps = 11/194 (5%) Frame = +2 Query: 68408 KIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX*LSCGLTS 68572 K I+D+ P +V Q FLG+ YYRR S I+ P Sbjct: 557 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIE 616 Query: 68573 VRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---KGK---VVAYASRQ 68734 K++ N +L P+ + L DAS+ G+G VL + K K VV Y S+ Sbjct: 617 K---LKAALCNSPVLV--PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKS 671 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 L+ +K Y +LEL+ ++ AL + L+G HF + T+H SL + N+ + R + WL Sbjct: 672 LESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWL 731 Query: 68915 ELLKDYDMTILYHPGKTNVVADALS 68989 + L YD T+ Y G NVVADA+S Sbjct: 732 DDLATYDFTLEYLAGPKNVVADAIS 756 Score = 73.0 bits (176), Expect = 6e-010 Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERN------VITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 N+ + D S G+GAVL N V+ Y S+ L+ + NYP +L+L ++ AL Sbjct: 636 NYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHH 695 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 +R+ L+G + TDH SL + + + R +RW++ L D T+ Y G NVVADA+ Sbjct: 696 FRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAI 755 Query: 57646 SRKV 57657 SR + Sbjct: 756 SRAI 759 Score = 72.2 bits (174), Expect(3) = 1e-039 Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 3/116 (2%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSD---IDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ E+ DLP P D + + I++ G + + PY +T +E+ +Q LL+ Sbjct: 312 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 371 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 FI S S +P++ V +KD +C+DYR LNK TI + +P+PRID+L + A + Sbjct: 372 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 430 Score = 62.8 bits (150), Expect(3) = 1e-039 Identities = 40/105 (38%), Positives = 49/105 (46%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+ +DL S YHQ+ + +D KTAF T G YE+ VM F L NA +TF M FR Sbjct: 431 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR 490 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH HL TV LK + L K KC+ Sbjct: 491 FVNVYLDDILIFSES--PEEHWKHLDTVLERLKNENLIVKKKKCK 533 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 E+ ++ ++R+ VP L H+ + H G T + + W ++QH I+ Sbjct: 828 EDEMIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQ 886 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ C CQ +K R G L+ +P E Sbjct: 887 YIRTCVQCQLIKSHRPRLHGLLQPLPIAE 915 >gb|AAA35184.1| (M23367) has homology to retroviral pol genes; ORF2 TYB3-2 (5' end of coding region not precisely determined) [Saccharomyces cerevisiae] Length = 1221 Score = 210 bits (530), Expect = 2e-051 Identities = 162/554 (29%), Positives = 263/554 (47%), Gaps = 11/554 (1%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L VL+ L+++ L K KC+F + F G+ + + I K AI + P Sbjct: 508 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 567 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQ--DVSFMWLVKCDMSFLKLKELITSAP 38969 +V + F+G+++YYRRF+ S A + L D S W K D + KLK + ++P Sbjct: 568 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS-QWTEKQDKAIEKLKAALCNSP 626 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLM------KQGWFIDYVSRELKVHELNYPTRDLEL 38807 +L + + DAS G+ VL K + Y S+ L+ + NYP +LEL Sbjct: 627 VLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 686 Query: 38806 AVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPG 38627 I+ AL +R+ L+G + TDH+SL + + + R RW++ L YD ++ Y G Sbjct: 687 LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 746 Query: 38626 KKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG--VQ 38453 KN+VA ++SR ++ + P RP+ + S + D S VL +M Q Sbjct: 747 PKNVVADAISRA--IYTITPE---TSRPIDTE---SWKSYYKSDPLCS-AVLIHMKELTQ 797 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF-DGVLKFSGRISVPTVGDSIQLIL 38276 ++ + A S + ++ + + D ++ + R+ VP + + L Sbjct: 798 HNVTPEDMS------AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRL 851 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 H + H G + Y W ++ I ++ C+ Q +K R G + Sbjct: 852 YHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 910 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I+E +W I+MDFV GLP TS ++ I V+VD+ +K AHF+ + +L + Sbjct: 911 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 970 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 + +HG P +I SDR + T+ LG + +S+A HPQTD QSE TIQ L + Sbjct: 971 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1030 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNS 37661 L V + P +F YNS Sbjct: 1031 LRAYVSTNIQNWHVYLPQIEFVYNS 1055 Score = 152 bits (379), Expect = 1e-033 Identities = 88/249 (35%), Positives = 132/249 (52%) Frame = +2 Query: 56429 IPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKV 56608 + PY + +E+ +Q+LL FI PS +P + V+ V KKD +FR+C++YR LNK Sbjct: 348 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 407 Query: 56609 TLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVK 56788 T+ + + +P ID+ + A +F+ +DL SGY Q+ + + KTAF T G YE+ V Sbjct: 408 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 467 Query: 56789 SFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNL 56968 FGL NAP+ F M F+ FV V++DDILI+S+S + +NL Sbjct: 468 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 525 Query: 56969 YAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 K KC+F FLG+ + + K A++ + P V F+G+ +YYRR Sbjct: 526 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 585 Query: 57149 FI*VFSSIA 57175 FI S IA Sbjct: 586 FIPNCSKIA 594 Score = 91.7 bits (224), Expect = 1e-015 Identities = 51/147 (34%), Positives = 79/147 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 I++D V L T ++I V+V+R +K AHF+ + T + +L + R I HG Sbjct: 921 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 980 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 +I SDR + + + + K LG + +S+ HPQTD QSE IQ L +L A V Sbjct: 981 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQ 1040 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFE 69957 +W +LP +EF YN++ + +PFE Sbjct: 1041 NWHVYLPQIEFVYNSTPTRTLGKSPFE 1067 Score = 78.4 bits (190), Expect(3) = 1e-039 Identities = 67/194 (34%), Positives = 98/194 (49%), Gaps = 11/194 (5%) Frame = +2 Query: 68408 KIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX*LSCGLTS 68572 K I+D+ P +V Q FLG+ YYRR S I+ P Sbjct: 557 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIE 616 Query: 68573 VRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---KGK---VVAYASRQ 68734 K++ N +L P+ + L DAS+ G+G VL + K K VV Y S+ Sbjct: 617 K---LKAALCNSPVLV--PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKS 671 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 L+ +K Y +LEL+ ++ AL + L+G HF + T+H SL + N+ + R + WL Sbjct: 672 LESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWL 731 Query: 68915 ELLKDYDMTILYHPGKTNVVADALS 68989 + L YD T+ Y G NVVADA+S Sbjct: 732 DDLATYDFTLEYLAGPKNVVADAIS 756 Score = 73.0 bits (176), Expect = 6e-010 Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERN------VITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 N+ + D S G+GAVL N V+ Y S+ L+ + NYP +L+L ++ AL Sbjct: 636 NYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHH 695 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 +R+ L+G + TDH SL + + + R +RW++ L D T+ Y G NVVADA+ Sbjct: 696 FRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAI 755 Query: 57646 SRKV 57657 SR + Sbjct: 756 SRAI 759 Score = 72.2 bits (174), Expect(3) = 1e-039 Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 3/116 (2%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSD---IDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ E+ DLP P D + + I++ G + + PY +T +E+ +Q LL+ Sbjct: 312 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 371 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 FI S S +P++ V +KD +C+DYR LNK TI + +P+PRID+L + A + Sbjct: 372 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 430 Score = 62.8 bits (150), Expect(3) = 1e-039 Identities = 40/105 (38%), Positives = 49/105 (46%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+ +DL S YHQ+ + +D KTAF T G YE+ VM F L NA +TF M FR Sbjct: 431 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR 490 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH HL TV LK + L K KC+ Sbjct: 491 FVNVYLDDILIFSES--PEEHWKHLDTVLERLKNENLIVKKKKCK 533 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 E+ ++ ++R+ VP L H+ + H G T + + W ++QH I+ Sbjct: 828 EDEMIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQ 886 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ C CQ +K R G L+ +P E Sbjct: 887 YIRTCVQCQLIKSHRPRLHGLLQPLPIAE 915 >gb|AAA98435.1| (M34549) POL3 [Saccharomyces cerevisiae] Length = 1270 Score = 210 bits (529), Expect = 3e-051 Identities = 162/554 (29%), Positives = 263/554 (47%), Gaps = 11/554 (1%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L VL+ L+++ L K KC+F + F G+ + + I K AI + P Sbjct: 482 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 541 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQ--DVSFMWLVKCDMSFLKLKELITSAP 38969 +V + F+G+++YYRRF+ S A + L D S W K D + KLK+ + ++P Sbjct: 542 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS-QWTEKQDKAIDKLKDALCNSP 600 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLM------KQGWFIDYVSRELKVHELNYPTRDLEL 38807 +L + + DAS G+ VL K + Y S+ L+ + NYP +LEL Sbjct: 601 VLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 660 Query: 38806 AVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPG 38627 I+ AL +R+ L+G + TDH+SL + + + R RW++ L YD ++ Y G Sbjct: 661 LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 720 Query: 38626 KKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG--VQ 38453 KN+VA ++SR V+ + P RP+ + S + D S VL +M Q Sbjct: 721 PKNVVADAISRA--VYTITPE---TSRPIDTE---SWKSYYKSDPLCS-AVLIHMKELTQ 771 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF-DGVLKFSGRISVPTVGDSIQLIL 38276 ++ + A S + ++ + + D ++ + R+ VP + + L Sbjct: 772 HNVTPEDMS------AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRL 825 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 H + H G + Y W ++ I ++ C+ Q +K R G + Sbjct: 826 YHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 884 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I+E +W I+MDFV GLP TS ++ I V+VD+ +K AHF+ + +L + Sbjct: 885 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 944 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 + +HG P +I SDR + T+ LG + +S+A HPQTD QSE TIQ L + Sbjct: 945 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1004 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNS 37661 L + P +F YNS Sbjct: 1005 LRAYASTNIQNWHVYLPQIEFVYNS 1029 Score = 152 bits (379), Expect = 1e-033 Identities = 88/249 (35%), Positives = 132/249 (52%) Frame = +2 Query: 56429 IPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKV 56608 + PY + +E+ +Q+LL FI PS +P + V+ V KKD +FR+C++YR LNK Sbjct: 322 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 381 Query: 56609 TLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVK 56788 T+ + + +P ID+ + A +F+ +DL SGY Q+ + + KTAF T G YE+ V Sbjct: 382 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 441 Query: 56789 SFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNL 56968 FGL NAP+ F M F+ FV V++DDILI+S+S + +NL Sbjct: 442 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 499 Query: 56969 YAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 K KC+F FLG+ + + K A++ + P V F+G+ +YYRR Sbjct: 500 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 559 Query: 57149 FI*VFSSIA 57175 FI S IA Sbjct: 560 FIPNCSKIA 568 Score = 90.1 bits (220), Expect = 4e-015 Identities = 50/147 (34%), Positives = 78/147 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 I++D V L T ++I V+V+R +K AHF+ + T + +L + R I HG Sbjct: 895 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 954 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 +I SDR + + + + K LG + +S+ HPQTD QSE IQ L +L A Sbjct: 955 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQ 1014 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFE 69957 +W +LP +EF YN++ + +PFE Sbjct: 1015 NWHVYLPQIEFVYNSTPTRTLGKSPFE 1041 Score = 78.0 bits (189), Expect(3) = 2e-039 Identities = 67/194 (34%), Positives = 97/194 (49%), Gaps = 11/194 (5%) Frame = +2 Query: 68408 KIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX*LSCGLTS 68572 K I+D+ P +V Q FLG+ YYRR S I+ P Sbjct: 531 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAID 590 Query: 68573 VRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---KGK---VVAYASRQ 68734 K + N +L P+ + L DAS+ G+G VL + K K VV Y S+ Sbjct: 591 K---LKDALCNSPVLV--PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKS 645 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 L+ +K Y +LEL+ ++ AL + L+G HF + T+H SL + N+ + R + WL Sbjct: 646 LESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWL 705 Query: 68915 ELLKDYDMTILYHPGKTNVVADALS 68989 + L YD T+ Y G NVVADA+S Sbjct: 706 DDLATYDFTLEYLAGPKNVVADAIS 730 Score = 73.4 bits (177), Expect = 5e-010 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERN------VITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 N+ + D S G+GAVL N V+ Y S+ L+ + NYP +L+L ++ AL Sbjct: 610 NYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHH 669 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 +R+ L+G + TDH SL + + + R +RW++ L D T+ Y G NVVADA+ Sbjct: 670 FRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAI 729 Query: 57646 SRKV 57657 SR V Sbjct: 730 SRAV 733 Score = 72.2 bits (174), Expect(3) = 2e-039 Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 3/116 (2%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSD---IDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ E+ DLP P D + + I++ G + + PY +T +E+ +Q LL+ Sbjct: 286 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 345 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 FI S S +P++ V +KD +C+DYR LNK TI + +P+PRID+L + A + Sbjct: 346 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 404 Score = 62.8 bits (150), Expect(3) = 2e-039 Identities = 40/105 (38%), Positives = 49/105 (46%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+ +DL S YHQ+ + +D KTAF T G YE+ VM F L NA +TF M FR Sbjct: 405 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR 464 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH HL TV LK + L K KC+ Sbjct: 465 FVNVYLDDILIFSES--PEEHWKHLDTVLERLKNENLIVKKKKCK 507 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 E+ ++ ++R+ VP L H+ + H G T + + W ++QH I+ Sbjct: 802 EDEMIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQ 860 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ C CQ +K R G L+ +P E Sbjct: 861 YIRTCVQCQLIKSHRPRLHGLLQPLPIAE 889 >emb|CAA97117.1| (Z72895) TY3B [Saccharomyces cerevisiae] Length = 1547 Score = 210 bits (529), Expect = 3e-051 Identities = 162/554 (29%), Positives = 263/554 (47%), Gaps = 11/554 (1%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L VL+ L+++ L K KC+F + F G+ + + I K AI + P Sbjct: 759 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 818 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQ--DVSFMWLVKCDMSFLKLKELITSAP 38969 +V + F+G+++YYRRF+ S A + L D S W K D + KLK+ + ++P Sbjct: 819 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS-QWTEKQDKAIDKLKDALCNSP 877 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLM------KQGWFIDYVSRELKVHELNYPTRDLEL 38807 +L + + DAS G+ VL K + Y S+ L+ + NYP +LEL Sbjct: 878 VLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 937 Query: 38806 AVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPG 38627 I+ AL +R+ L+G + TDH+SL + + + R RW++ L YD ++ Y G Sbjct: 938 LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 997 Query: 38626 KKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG--VQ 38453 KN+VA ++SR V+ + P RP+ + S + D S VL +M Q Sbjct: 998 PKNVVADAISRA--VYTITPE---TSRPIDTE---SWKSYYKSDPLCS-AVLIHMKELTQ 1048 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF-DGVLKFSGRISVPTVGDSIQLIL 38276 ++ + A S + ++ + + D ++ + R+ VP + + L Sbjct: 1049 HNVTPEDMS------AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRL 1102 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 H + H G + Y W ++ I ++ C+ Q +K R G + Sbjct: 1103 YHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 1161 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I+E +W I+MDFV GLP TS ++ I V+VD+ +K AHF+ + +L + Sbjct: 1162 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 1221 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 + +HG P +I SDR + T+ LG + +S+A HPQTD QSE TIQ L + Sbjct: 1222 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1281 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNS 37661 L + P +F YNS Sbjct: 1282 LRAYASTNIQNWHVYLPQIEFVYNS 1306 Score = 152 bits (379), Expect = 1e-033 Identities = 88/249 (35%), Positives = 132/249 (52%) Frame = +2 Query: 56429 IPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKV 56608 + PY + +E+ +Q+LL FI PS +P + V+ V KKD +FR+C++YR LNK Sbjct: 599 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 658 Query: 56609 TLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVK 56788 T+ + + +P ID+ + A +F+ +DL SGY Q+ + + KTAF T G YE+ V Sbjct: 659 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 718 Query: 56789 SFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNL 56968 FGL NAP+ F M F+ FV V++DDILI+S+S + +NL Sbjct: 719 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 776 Query: 56969 YAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 K KC+F FLG+ + + K A++ + P V F+G+ +YYRR Sbjct: 777 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 836 Query: 57149 FI*VFSSIA 57175 FI S IA Sbjct: 837 FIPNCSKIA 845 Score = 90.1 bits (220), Expect = 4e-015 Identities = 50/147 (34%), Positives = 78/147 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 I++D V L T ++I V+V+R +K AHF+ + T + +L + R I HG Sbjct: 1172 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 1231 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 +I SDR + + + + K LG + +S+ HPQTD QSE IQ L +L A Sbjct: 1232 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQ 1291 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFE 69957 +W +LP +EF YN++ + +PFE Sbjct: 1292 NWHVYLPQIEFVYNSTPTRTLGKSPFE 1318 Score = 78.0 bits (189), Expect(3) = 2e-039 Identities = 67/194 (34%), Positives = 97/194 (49%), Gaps = 11/194 (5%) Frame = +2 Query: 68408 KIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX*LSCGLTS 68572 K I+D+ P +V Q FLG+ YYRR S I+ P Sbjct: 808 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAID 867 Query: 68573 VRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---KGK---VVAYASRQ 68734 K + N +L P+ + L DAS+ G+G VL + K K VV Y S+ Sbjct: 868 K---LKDALCNSPVLV--PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKS 922 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 L+ +K Y +LEL+ ++ AL + L+G HF + T+H SL + N+ + R + WL Sbjct: 923 LESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWL 982 Query: 68915 ELLKDYDMTILYHPGKTNVVADALS 68989 + L YD T+ Y G NVVADA+S Sbjct: 983 DDLATYDFTLEYLAGPKNVVADAIS 1007 Score = 73.4 bits (177), Expect = 5e-010 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERN------VITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 N+ + D S G+GAVL N V+ Y S+ L+ + NYP +L+L ++ AL Sbjct: 887 NYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHH 946 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 +R+ L+G + TDH SL + + + R +RW++ L D T+ Y G NVVADA+ Sbjct: 947 FRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAI 1006 Query: 57646 SRKV 57657 SR V Sbjct: 1007 SRAV 1010 Score = 72.2 bits (174), Expect(3) = 2e-039 Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 3/116 (2%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSD---IDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ E+ DLP P D + + I++ G + + PY +T +E+ +Q LL+ Sbjct: 563 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 622 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 FI S S +P++ V +KD +C+DYR LNK TI + +P+PRID+L + A + Sbjct: 623 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 681 Score = 62.8 bits (150), Expect(3) = 2e-039 Identities = 40/105 (38%), Positives = 49/105 (46%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+ +DL S YHQ+ + +D KTAF T G YE+ VM F L NA +TF M FR Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR 741 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH HL TV LK + L K KC+ Sbjct: 742 FVNVYLDDILIFSES--PEEHWKHLDTVLERLKNENLIVKKKKCK 784 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 E+ ++ ++R+ VP L H+ + H G T + + W ++QH I+ Sbjct: 1079 EDEMIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQ 1137 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ C CQ +K R G L+ +P E Sbjct: 1138 YIRTCVQCQLIKSHRPRLHGLLQPLPIAE 1166 >emb|CAA97115.1| (Z72894) TY3B [Saccharomyces cerevisiae] Length = 1547 Score = 210 bits (529), Expect = 3e-051 Identities = 162/554 (29%), Positives = 263/554 (47%), Gaps = 11/554 (1%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH +L VL+ L+++ L K KC+F + F G+ + + I K AI + P Sbjct: 759 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 818 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNLQ--DVSFMWLVKCDMSFLKLKELITSAP 38969 +V + F+G+++YYRRF+ S A + L D S W K D + KLK+ + ++P Sbjct: 819 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS-QWTEKQDKAIDKLKDALCNSP 877 Query: 38968 ILTLLVEGGGFTIYCDASGVGVDFVLM------KQGWFIDYVSRELKVHELNYPTRDLEL 38807 +L + + DAS G+ VL K + Y S+ L+ + NYP +LEL Sbjct: 878 VLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 937 Query: 38806 AVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPG 38627 I+ AL +R+ L+G + TDH+SL + + + R RW++ L YD ++ Y G Sbjct: 938 LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 997 Query: 38626 KKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMG--VQ 38453 KN+VA ++SR V+ + P RP+ + S + D S VL +M Q Sbjct: 998 PKNVVADAISRA--VYTITPE---TSRPIDTE---SWKSYYKSDPLCS-AVLIHMKELTQ 1048 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDF-DGVLKFSGRISVPTVGDSIQLIL 38276 ++ + A S + ++ + + D ++ + R+ VP + + L Sbjct: 1049 HNVTPEDMS------AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRL 1102 Query: 38275 SEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKR 38096 H + H G + Y W ++ I ++ C+ Q +K R G + Sbjct: 1103 YHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 1161 Query: 38095 LSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIW 37916 L I+E +W I+MDFV GLP TS ++ I V+VD+ +K AHF+ + +L + Sbjct: 1162 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 1221 Query: 37915 EVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDM 37736 + +HG P +I SDR + T+ LG + +S+A HPQTD QSE TIQ L + Sbjct: 1222 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1281 Query: 37735 LHVCVLEFGGQ*DQFSPLAQFAYNS 37661 L + P +F YNS Sbjct: 1282 LRAYASTNIQNWHVYLPQIEFVYNS 1306 Score = 152 bits (379), Expect = 1e-033 Identities = 88/249 (35%), Positives = 132/249 (52%) Frame = +2 Query: 56429 IPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLNKV 56608 + PY + +E+ +Q+LL FI PS +P + V+ V KKD +FR+C++YR LNK Sbjct: 599 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 658 Query: 56609 TLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFLVK 56788 T+ + + +P ID+ + A +F+ +DL SGY Q+ + + KTAF T G YE+ V Sbjct: 659 TISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVM 718 Query: 56789 SFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXKNL 56968 FGL NAP+ F M F+ FV V++DDILI+S+S + +NL Sbjct: 719 PFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 776 Query: 56969 YAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRR 57148 K KC+F FLG+ + + K A++ + P V F+G+ +YYRR Sbjct: 777 IVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRR 836 Query: 57149 FI*VFSSIA 57175 FI S IA Sbjct: 837 FIPNCSKIA 845 Score = 90.1 bits (220), Expect = 4e-015 Identities = 50/147 (34%), Positives = 78/147 (53%) Frame = +1 Query: 69517 IAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGVSI 69696 I++D V L T ++I V+V+R +K AHF+ + T + +L + R I HG Sbjct: 1172 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 1231 Query: 69697 SIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGN 69876 +I SDR + + + + K LG + +S+ HPQTD QSE IQ L +L A Sbjct: 1232 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQ 1291 Query: 69877 HWDQFLPLVEFAYNNSYHLSFEMAPFE 69957 +W +LP +EF YN++ + +PFE Sbjct: 1292 NWHVYLPQIEFVYNSTPTRTLGKSPFE 1318 Score = 78.0 bits (189), Expect(3) = 2e-039 Identities = 67/194 (34%), Positives = 97/194 (49%), Gaps = 11/194 (5%) Frame = +2 Query: 68408 KIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX*LSCGLTS 68572 K I+D+ P +V Q FLG+ YYRR S I+ P Sbjct: 808 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAID 867 Query: 68573 VRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ---KGK---VVAYASRQ 68734 K + N +L P+ + L DAS+ G+G VL + K K VV Y S+ Sbjct: 868 K---LKDALCNSPVLV--PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKS 922 Query: 68735 LKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWL 68914 L+ +K Y +LEL+ ++ AL + L+G HF + T+H SL + N+ + R + WL Sbjct: 923 LESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWL 982 Query: 68915 ELLKDYDMTILYHPGKTNVVADALS 68989 + L YD T+ Y G NVVADA+S Sbjct: 983 DDLATYDFTLEYLAGPKNVVADAIS 1007 Score = 73.4 bits (177), Expect = 5e-010 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERN------VITYASRQLKVHEHNYPTHDLDLAAVVFALKQ 57465 N+ + D S G+GAVL N V+ Y S+ L+ + NYP +L+L ++ AL Sbjct: 887 NYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHH 946 Query: 57466 WRHYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADAL 57645 +R+ L+G + TDH SL + + + R +RW++ L D T+ Y G NVVADA+ Sbjct: 947 FRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAI 1006 Query: 57646 SRKV 57657 SR V Sbjct: 1007 SRAV 1010 Score = 72.2 bits (174), Expect(3) = 2e-039 Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 3/116 (2%) Frame = +2 Query: 67703 EFLEVFPTDLPDVPPDSD---IDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 ++ E+ DLP P D + + I++ G + + PY +T +E+ +Q LL+ Sbjct: 563 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 622 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASV 68050 FI S S +P++ V +KD +C+DYR LNK TI + +P+PRID+L + A + Sbjct: 623 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 681 Score = 62.8 bits (150), Expect(3) = 2e-039 Identities = 40/105 (38%), Positives = 49/105 (46%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 F+ +DL S YHQ+ + +D KTAF T G YE+ VM F L NA +TF M FR Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR 741 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 EEH HL TV LK + L K KC+ Sbjct: 742 FVNVYLDDILIFSES--PEEHWKHLDTVLERLKNENLIVKKKKCK 784 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 57897 EEGILMIKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 E+ ++ ++R+ VP L H+ + H G T + + W ++QH I+ Sbjct: 1079 EDEMIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQ 1137 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMPFLE 58163 ++ C CQ +K R G L+ +P E Sbjct: 1138 YIRTCVQCQLIKSHRPRLHGLLQPLPIAE 1166 >dbj|BAB10837.1| (AB016892) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1462 Score = 157 bits (394), Expect = 2e-035 Identities = 109/357 (30%), Positives = 170/357 (47%), Gaps = 3/357 (0%) Frame = -3 Query: 6089 LDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVI---VVARGTNSGTLYTTLG 5919 L +V ++ G+ +LISV Q I++ I ++ G LY G Sbjct: 395 LQEVFFVDGLHCHLISVSQLTRAKSCVFQITDKVCIIQDRITLTLIGAGKQQNGLYFFRG 454 Query: 5918 CINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRV 5739 + + S S LWH RLGH S+K +K+L + +FD CE C+ KQ R Sbjct: 455 TETVASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDSTG--HAFDSKTCEICIKAKQTRD 512 Query: 5738 SFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFA 5559 F + + +M H D+WGP +S+ GS +++T + +++R VW+Y L Sbjct: 513 PFPLSNNKT-SSPFEMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPM 571 Query: 5558 TFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDER 5379 K + + VE Q S K+K +RSDNG E+ ++F GI + G +QNG ER Sbjct: 572 HLKNFISLVERQFSTKIKTIRSDNGTEFVC--LSSFFVDHGIIHETSCVGTPQQNGRVER 629 Query: 5378 MNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSH 5199 ++ + AR++R +P FW+ T AYLINR P+ L K E+ + +H Sbjct: 630 KHRHILNVARALRFQARLPIEFWSYCALTAAYLINRTPTPLLQGKTPFELLYNRPPPVNH 689 Query: 5198 LRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 +R FGC YVH +K ++ K +GY G+R ++ + I DV F E+ Sbjct: 690 IRVFGCICYVHNQKHGGDKFESRSNKSIFLGYPFAKKGWRVYNFETGVISVSRDVVFRET 749 Score = 155 bits (388), Expect = 9e-035 Identities = 91/212 (42%), Positives = 128/212 (59%), Gaps = 6/212 (2%) Frame = -2 Query: 4809 YLLLIDEG-EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWV 4633 Y+ I G EP+S+ EA+ E+ W A+ DE+ SLE TW + DLP GK+AL KWV Sbjct: 929 YVFAISLGIEPKSYKEAILDEN---WRCAVSDEIVSLENLGTWTVEDLPPGKKALGCKWV 985 Query: 4632 FRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQ 4468 FR+K DG R KA LVV G DY+E F+PV K+ ++R L VAS + + Q Sbjct: 986 FRLKYKSDGTLERHKARLVVLGNKQTEGIDYSETFAPVAKMVTVRAFLQQVASLDWEVHQ 1045 Query: 4467 MDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTK 4288 MD FLHGDLD+E+Y++ P GF VC+L ++LYGLKQAPR W+ K + + Sbjct: 1046 MDVHNAFLHGDLDEEVYIKFPPGF-GSDDNRKVCRLRKALYGLKQAPRCWFAKLTTALND 1104 Query: 4287 SEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 F + D + + + +L+Y+DD++I GSS+ Sbjct: 1105 YGFIQDISDYSLFTMERNGIRLHILVYVDDLIITGSSL 1142 Score = 147 bits (367), Expect(3) = 4e-051 Identities = 73/156 (46%), Positives = 98/156 (62%), Gaps = 1/156 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VARAL +Q++LP +W C LT YLINR +L K F Sbjct: 618 VGTPQQNGRVERKHRHILNVARALRFQARLPIEFWSYCALTAAYLINRTPTPLLQGKTPF 677 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++LYN+ P ++++VFGC+C+ H DKFE R+ IFLGYPF G++V +F T Sbjct: 678 ELLYNRPPPVNHIRVFGCICYVHNQKHGGDKFESRSNKSIFLGYPFAKKGWRVYNFETGV 737 Query: 65337 IHVSRDVSFYENVFPFTLFEVDFSFSTTLEKLSINQN 65447 I VSRDV F E FPF D + + L + +Q+ Sbjct: 738 ISVSRDVVFRETEFPFPASVFDSTPDSQLSPSNADQS 774 Score = 87.8 bits (214), Expect(2) = 5e-028 Identities = 49/130 (37%), Positives = 77/130 (58%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKI-EQVPIFCDNT 87292 LG IS +KK + V+ S+AEAEY A A +++LW++ L G+ E + ++ D+ Sbjct: 1315 LGGSPISWKTKKHDVVSRSSAEAEYRAMADTVSELLWLRALLPALGISCNEPIMLYSDSL 1374 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI++ N V H RTKHV HF+RD + +G I+ + Q+ADI T +L R F+ Sbjct: 1375 SAISLAANPVYHARTKHVGRDVHFVRDEIIRGTIATKHVSTTSQLADIMTKALGRREFDA 1434 Query: 87111 NRLELGMMKIN 87079 L+LG+ ++ Sbjct: 1435 FLLKLGICNLH 1445 Score = 76.5 bits (185), Expect(3) = 4e-051 Identities = 36/88 (40%), Positives = 54/88 (60%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP+ N +S+ F +++ DLW PY + G YFL +VD+++R+ W LL K Sbjct: 514 FPLSNNKTSSPF-EMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMH 572 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +K+F+SLV QF IK+IR+ NG EF+ Sbjct: 573 LKNFISLVERQFSTKIKTIRSDNGTEFV 600 Score = 66.7 bits (160), Expect = 5e-008 Identities = 60/231 (25%), Positives = 91/231 (38%), Gaps = 3/231 (1%) Frame = -2 Query: 88563 QQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYY 88384 + W +DS + HMTG + + + +V++ Sbjct: 341 ESWIIDSGATNHMTGTLEFLRDVCDMPPIMIKLPDGRLTTSTKHGRVYLGSSLDLQEVFF 400 Query: 88383 VKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIG--KRDKHIYTV-DTSTIY 88213 V GL +L+S+SQL + +F+ T I + L LIG K+ +Y T T+ Sbjct: 401 VDGLHCHLISVSQLT-RAKSCVFQITDKVCIIQDRITLTLIGAGKQQNGLYFFRGTETV- 458 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 ++ ++ LWH RL H S L L D + K CE C K Sbjct: 459 ----ASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDST-----GHAFDSKTCEICIKAKQ 509 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 + F +S+ E++H DL GP R S Y LVD+YTR Y+ Sbjct: 510 TRDPFPLSNNKTSS-PFEMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYL 562 Score = 66.3 bits (159), Expect(2) = 5e-028 Identities = 35/136 (25%), Positives = 72/136 (52%), Gaps = 1/136 (0%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTV-EQKLYRGMIGSL 87711 +P G ++ Q+KY +++ + P+ KL L G T+ + YR ++G L Sbjct: 1175 SPAGIYLCQRKYAIDIITETGLLGVWPASHPLEQNHKLAL-AFGDTISDPSRYRRLVGRL 1233 Query: 87710 LYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 +YL +RP++ +++ + ++F ++PK H++A R++ YLK + G+ + L G+ Sbjct: 1234 IYLGTTRPELSYAIHMLSQFMSDPKADHMEAALRVVRYLKSSPGQGILLRSNTPLVLTGW 1293 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D + + ++S TG Sbjct: 1294 CDSGFDSCPITQRSLTG 1310 Score = 47.3 bits (110), Expect = 0.034 Identities = 44/185 (23%), Positives = 74/185 (39%), Gaps = 3/185 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECI-WERXXXXXXXXXXXXVEKGLLGS 515 Y W ++LA+ R K G DG+ P+ + W + + L S Sbjct: 46 YDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDWIANNALVVSWMKLTIHESLATS 105 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 + + + D+W ++ +RF + L E+A Q + Y+ K LW Sbjct: 106 MSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQKGTPIETYYGKLSQLWRSLADY 165 Query: 334 VPTPSCECERSKEYVVNXXXXXXXXXLMGLNES-YI*ARSQILLMIPFPLVNQAY-LMVM 161 + E R + LMGL+ES Y +S +L +P P + +AY + Sbjct: 166 QQAKTMEEVRKER-----EEDKLHQFLMGLDESMYGAVKSALLSRVPLPSLEEAYNTLTQ 220 Query: 160 SDESKNQS 137 +ESK+ S Sbjct: 221 DEESKSLS 228 Score = 43.4 bits (100), Expect(2) = 4e-005 Identities = 27/84 (32%), Positives = 37/84 (43%) Frame = +2 Query: 64007 PFFSYLPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSF 64186 P LP+G T+ G L SSL L ++ FV +LISV L V Sbjct: 368 PIMIKLPDGRLTTSTKHGRVYLGSSLDLQEVFFVDGLHCHLISVSQLTRAKSCVFQITDK 427 Query: 64187 SCLMQGPSMKSPLEIGRAHNGLYF 64258 C++Q + + G+ NGLYF Sbjct: 428 VCIIQDRITLTLIGAGKQQNGLYF 451 Score = 41.8 bits (96), Expect = 1.5 Identities = 19/90 (21%), Positives = 42/90 (46%) Frame = +3 Query: 62775 ESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDDM 62954 ++ G+ I + G Y W + + + K GF +G I P + F W + + Sbjct: 30 DNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDWIANNAL 89 Query: 62955 VTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 V SW ++ + LA ++ +++++ +W + Sbjct: 90 VVSWMKLTIHESLATSMSHLDDSHDMWTHI 119 Score = 32.8 bits (73), Expect(2) = 4e-005 Identities = 14/26 (53%), Positives = 18/26 (68%) Frame = +3 Query: 63927 SWIIDSGASNHMTFDKTLLINIIPLP 64004 SWIIDSGA+NHMT L ++ +P Sbjct: 342 SWIIDSGATNHMTGTLEFLRDVCDMP 367 Score = 28.6 bits (62), Expect(3) = 4e-051 Identities = 17/57 (29%), Positives = 27/57 (46%) Frame = +2 Query: 64493 MSCMSHGNSTDYLWHNRLGHVSFIKMKGISSIHISFSPKKHFVCTVCPMDR*TRSYF 64663 ++ M+ +S+ LWH RLGH S +K +S + C +C + TR F Sbjct: 458 VASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDSTGHAFDSKTCEICIKAKQTRDPF 514 >dbj|BAA16012.1| (D90851) ORF_ID:o373#11~similar to [PIR Accession Number JQ0041] [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >dbj|BAA16004.1| (D90850) ORF_ID:o373#11~similar to [PIR Accession Number JQ0041] [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >dbj|BAA15821.1| (D90838) ORF_ID:o348#4~similar to [PIR Accession Number JQ0041] [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >dbj|BAA15018.1| (D90779) ORF_ID:o267#9~similar to [PIR Accession Number JQ0041] [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >dbj|BAA15012.1| (D90778) ORF_ID:o267#9~similar to [PIR Accession Number JQ0041] [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >emb|CAA23540.1| (V00279) ORF 3 (AA 1-97) [Escherichia coli] Length = 97 Score = 209 bits (526), Expect = 6e-051 Identities = 96/97 (98%), Positives = 97/97 (99%) Frame = +2 Query: 20432 VRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 20611 +RSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC Sbjct: 1 MRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCQRMVIVGYGRCFADRQNLMVC 60 Query: 20612 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 20722 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP Sbjct: 61 LRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP 97 >emb|CAA72989.1| (Y12321) open reading frame 1 [Brassica oleracea] Length = 1131 Score = 187 bits (471), Expect(2) = 2e-044 Identities = 132/416 (31%), Positives = 198/416 (46%), Gaps = 5/416 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + ++ + V L + ++I G G V L TL +V YIP + N Sbjct: 400 HVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIV----QLNEHITLHNVLYIPEFRLN 455 Query: 6050 LISVGQFDST-GYAAVFGKGSWKI---VKGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 L+S+ S G +F S I KG + +G LY L + + +V Sbjct: 456 LLSISSLTSDIGSQVIFDVSSCAIQDPTKGW-TIGQGRRVANLYV-LDVKSSPMKINAVV 513 Query: 5882 GSCLWHNRLGHMSAKGM-KMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*K 5706 LWH RLGH S + K+ A G + D C C + KQK++S++ + Sbjct: 514 DISLWHKRLGHPSYTRLDKISEALGTTKHKNKGDAH-CHVCHLAKQKKLSYS-SQNHICT 571 Query: 5705 VLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVEN 5526 ++ H DVWGP V +L G ++++T + D SR W+Y L+ SDV F + ++E Sbjct: 572 ASFQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIET 631 Query: 5525 QSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARS 5346 Q + K+K +R DN E FT KGI + P QN + ER ++ L AR+ Sbjct: 632 QYNTKIKSVRRDNAPELS---FTELFKEKGIVSYHSCPETLEQNSVLERKHQHLLNVARA 688 Query: 5345 MRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVH 5166 + +P +W + V T A+LINR PS L K EV + K +Y LRTFGC Y Sbjct: 689 LMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGS 748 Query: 5165 VDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKVL 4986 P++R+K ++ C +GY S GY+ D ++ KI +VTF E + K QK+ Sbjct: 749 TSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFPMAKHQKMD 808 Query: 4985 E 4983 E Sbjct: 809 E 809 Score = 153 bits (383), Expect = 3e-034 Identities = 90/222 (40%), Positives = 137/222 (61%), Gaps = 9/222 (4%) Frame = -2 Query: 4854 SRTIRAPDRYSHSLHYLLLIDEGE-PESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVL 4678 S T+ SH L Y+ I P+S+ E V S +W + D E+ ++E+NDTW + Sbjct: 868 SSTLSYSQISSHHLAYINSITNIPIPQSYAE---VRQSKEWTESADKELDAMEENDTWDV 924 Query: 4677 TDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIR 4513 LP GK+A+ +WV +K DG R K+ LV KG DY E FSPV K+ +++ Sbjct: 925 VPLPKGKKAIGCRWVHTLKFNADGTLERRKSRLVGKGYTQKEGLDYIETFSPVAKMATVK 984 Query: 4512 ILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKE---HMVCKLTRSLYG 4342 +LL + AS+ L Q+D FL+G+LD+EIYM+ P+G+ + + VCKL +S+YG Sbjct: 985 LLLKVGASKKWFLHQLDISNAFLNGELDEEIYMKLPEGYAERKGDLPPNAVCKLKKSIYG 1044 Query: 4341 LKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLI 4189 LKQA RQW+KKF + + + F KA D + ++ N +V +L+Y+DD++I Sbjct: 1045 LKQASRQWFKKFSTSLFQLGFQKAHGDHTLFVRQTENDFVAVLVYVDDIVI 1095 Score = 148 bits (370), Expect(3) = 1e-050 Identities = 66/132 (50%), Positives = 96/132 (72%), Gaps = 1/132 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN +ERKH+HLL VARAL++QS++P +YWG+C+LT +LINR + +L NK+ ++V Sbjct: 668 TLEQNSVLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEV 727 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L K P Y L+ FGCLC+ T + KF PR+ +FLGYP GYK+LD + KI+ Sbjct: 728 LMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIY 787 Query: 65343 VSRDVSFYENVFP 65381 +SR+V+F+E++FP Sbjct: 788 ISRNVTFHEDIFP 800 Score = 83.9 bits (204), Expect = 3e-013 Identities = 60/233 (25%), Positives = 108/233 (45%), Gaps = 1/233 (0%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 + + W +DS + H+ +++++ S++ ++ ++ V Sbjct: 387 ANETWIIDSGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIVQLNEHITLHNV 446 Query: 88389 YYVKGLIHNLLSISQLC-DKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 Y+ NLLSIS L D ++VIF + + + + G+R ++Y +D + Sbjct: 447 LYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYVLDVKSSP 506 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 K + + LWHKRL H S +L+K+ +G K+K K D C C L K Sbjct: 507 MKINAVVDIS-----LWHKRLGHPSYTRLDKISE---ALGTTKHKNKGDAHCHVCHLAKQ 558 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 K S+ S+ + T S +L+H+D+ GP V++ Y +VDD++R T Y+ Sbjct: 559 KKLSYSSQNHIC-TASFQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATWIYL 611 Score = 81.1 bits (197), Expect = 2e-012 Identities = 54/182 (29%), Positives = 88/182 (47%), Gaps = 2/182 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPK-DKFLGLECIWERXXXXXXXXXXXXVEKGLLGS 515 Y W MK+A+ +NK+G +DG+ + D +W R V + S Sbjct: 37 YDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRS 96 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 I+ A D+W +L+ RF+ + TFNL QEI ++ QG+ S+ Y++ K LW+ E V Sbjct: 97 ILRLNDAADIWRDLHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDYYTTLKTLWDNLESV 156 Query: 334 -VPTPSCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMS 158 P C C +++ L GLN+SY R QI++ P + + Y ++ Sbjct: 157 DEPDTPCVCGNAEKLQKKVDRAKIVKFLAGLNDSYAIIRRQIIMKKVLPSLVEVYNILDQ 216 Query: 157 DESK 146 D+S+ Sbjct: 217 DDSQ 220 Score = 74.9 bits (181), Expect(3) = 1e-050 Identities = 36/74 (48%), Positives = 46/74 (61%) Frame = +1 Query: 64696 FDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQF 64875 F LL +D+W P+ V T GYKYFL IVDD SR+TW LL KS+ L +FV+ + Q+ Sbjct: 574 FQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIETQY 633 Query: 64876 RVTIKSIRTYNGLE 64917 IKS+R N E Sbjct: 634 NTKIKSVRRDNAPE 647 Score = 71.0 bits (171), Expect(2) = 5e-019 Identities = 29/100 (29%), Positives = 51/100 (51%) Frame = +3 Query: 62745 SNNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAA 62924 + + +MH ++ G ++ L G+ Y W + + KNK GF++G + P Sbjct: 11 NQSPLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPT 70 Query: 62925 FALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 F LW RC+ MV SW NS+ + ++ +N+A +W +L Sbjct: 71 FRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRDL 110 Score = 57.8 bits (137), Expect(2) = 3e-010 Identities = 30/80 (37%), Positives = 45/80 (55%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQ 64201 LPNG VK++ +G LN +TLH +L++ F+ NL+S+ SL S + F+ SC +Q Sbjct: 421 LPNGMIVKISGVGIVQLNEHITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQ 480 Query: 64202 GPSMKSPLEIGRAHNGLYFL 64261 P+ + GR LY L Sbjct: 481 DPTKGWTIGQGRRVANLYVL 500 Score = 52.7 bits (124), Expect(2) = 5e-019 Identities = 45/190 (23%), Positives = 80/190 (41%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 +L R+ N + + L EI L Q ++ ++ YYT ++ L + L + D VC Sbjct: 109 DLHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDYYTTLKTLWDNLESVDEPDTPCVCGNA 168 Query: 63220 VES*RCITLSKTDASFNSLWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPH 63399 + + + +K L N+ Y I+R I++ LP++ + ++IL ++ + Sbjct: 169 EKLQKKVDRAKIVKFLAGL--NDSYAIIRRQIIMKKVLPSLVEVYNILDQDDSQKGF--- 223 Query: 63400 GKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKC 63579 ST++ A + S N A N+ +C VGH ++C Sbjct: 224 ------STAI-TPAAFNVSENVPPPMAEAGICYVQTG--PNKGRPICSFCNRVGHIAERC 274 Query: 63580 YKLSWFPIGF 63609 YK FP GF Sbjct: 275 YKKHGFPPGF 284 Score = 36.4 bits (82), Expect(2) = 3e-010 Identities = 13/28 (46%), Positives = 22/28 (78%) Frame = +3 Query: 63909 HVLSNNSWIIDSGASNHMTFDKTLLINI 63992 H L+N +WIIDSGA++H+ D+++ +I Sbjct: 384 HTLANETWIIDSGATHHVCHDRSMYTSI 411 Score = 27.4 bits (59), Expect(3) = 1e-050 Identities = 10/18 (55%), Positives = 13/18 (71%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGIS 64582 LWH RLGH S+ ++ IS Sbjct: 517 LWHKRLGHPSYTRLDKIS 534 Score = 21.6 bits (44), Expect(2) = 2e-044 Identities = 7/10 (70%), Positives = 10/10 (100%) Frame = -2 Query: 6264 ESWILDSGAS 6235 E+WI+DSGA+ Sbjct: 389 ETWIIDSGAT 398 >gb|AAD19784.1| (AC006528) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1501 Score = 161 bits (402), Expect(2) = 1e-042 Identities = 95/244 (38%), Positives = 140/244 (56%), Gaps = 5/244 (2%) Frame = -2 Query: 4911 PTPTEESEEVTREQVLRRSSRTIRAPDRYSHSLHYLLLIDEGEPESFDEALQVEDSIKWE 4732 P +S V + + + A SH + + D EP+ F EA+Q++ W Sbjct: 949 PADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRAYLAAITDNVEPKHFKEAVQIK---VWN 1005 Query: 4731 LAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK-RRFKAHLVVKG*---- 4567 AM E+ +LE N TW + DLP GK A+ ++WVF+ K DG R+KA LVV+G Sbjct: 1006 DAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYNSDGTVERYKARLVVQGNKQVE 1065 Query: 4566 ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVVP 4387 DY E F+PVV++T++R LL VA+ + QMD FLHGDL++E+YM+ P GF Sbjct: 1066 GEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGF-RH 1124 Query: 4386 GKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLY 4207 VC+L +SLYGLKQAPR W+KK + + F ++ +D + N + +L+Y Sbjct: 1125 SHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIY 1184 Query: 4206 LDDMLIEGS 4180 +DD+LI G+ Sbjct: 1185 VDDLLICGN 1193 Score = 146 bits (364), Expect = 6e-032 Identities = 107/365 (29%), Positives = 162/365 (44%), Gaps = 4/365 (1%) Frame = -3 Query: 6110 TLRNQRTLDDVRYIPGIKKNLISVGQF-DSTGYAAVFGKGSWKIV--KGVIVVARGTNSG 5940 TL N +L +V ++P + LISV + T A F + ++ G G Sbjct: 446 TLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERG 505 Query: 5939 TLYTTLGCINMDVVAESV-SGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESC 5763 +Y + +V S LWH RLGH S + L + C+ C Sbjct: 506 GVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVTSHS--CDVC 563 Query: 5762 VMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFL 5583 KQ R F ++ + + + H DVWGP V + G+ +++T + D+SR VW Y L Sbjct: 564 FRAKQTREVFPESINKT-EECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLL 622 Query: 5582 KHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKA 5403 S+V + E Q VK +RSDNG E+ +++ GI + G Sbjct: 623 LEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEF--MCLSSYFRENGIIHQTSCVGTP 680 Query: 5402 RQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWI 5223 +QNG ER ++ + AR++ +P FW + T AYLINR PS L + EV Sbjct: 681 QQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLH 740 Query: 5222 RKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRH 5043 + YS LR FG YVH ++K ++ C +GY G++ +D + + L Sbjct: 741 GSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVS 800 Query: 5042 CDVTFDESV 5016 DV F E V Sbjct: 801 RDVIFREEV 809 Score = 145 bits (361), Expect(3) = 1e-050 Identities = 74/152 (48%), Positives = 96/152 (62%), Gaps = 1/152 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VARALL+Q+ LP ++WGE ILT YLINR +S+L + + Sbjct: 677 VGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPY 736 Query: 65160 QVLYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 +VL+ P YS L+VFG C+ + KDKF R+ IF+GYPF G+KV D + Sbjct: 737 EVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNE 796 Query: 65337 IHVSRDVSFYENVFPFTLFEVDFSFSTTLEKLS 65435 VSRDV F E VFP+ ST+L +S Sbjct: 797 FLVSRDVIFREEVFPYAGVNSSTLASTSLPTVS 829 Score = 88.2 bits (215), Expect(2) = 3e-029 Identities = 48/130 (36%), Positives = 80/130 (60%), Gaps = 2/130 (1%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVP--IFCDN 87295 LG IS +KKQ++V+ S+AEAEY A + ++ W+++ L + G++ + P ++CD+ Sbjct: 1368 LGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKLLKELGIE-QSTPARLYCDS 1426 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 +AI+I N V H+RTKH++ H +RD V G I+ EQ+AD+FT +L R F Sbjct: 1427 KAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFL 1486 Query: 87114 RNRLELGMMKIN 87079 +LG+ ++ Sbjct: 1487 YLMSKLGVQNLH 1498 Score = 73.4 bits (177), Expect(3) = 1e-050 Identities = 36/89 (40%), Positives = 51/89 (56%) Frame = +1 Query: 64657 IFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQ 64836 +FP ++ + F L+ D+W PY V G YFL IVDD+SR+ WT LL KS Q Sbjct: 572 VFP-ESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQ 630 Query: 64837 TIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 + +F+ QF T+K +R+ NG EF+ Sbjct: 631 VLTNFLKYAEKQFGKTVKMVRSDNGTEFM 659 Score = 69.9 bits (168), Expect(2) = 3e-029 Identities = 39/132 (29%), Positives = 68/132 (50%) Frame = -3 Query: 87884 PRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLY 87705 P G ++ Q+KY +++ ++ TP+ L + + K YR ++G LLY Sbjct: 1229 PEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLY 1288 Query: 87704 LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYAD 87525 L +RP++ +SV + A+F NP+E+H A R++ YLKG+ G+ + L Y D Sbjct: 1289 LLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCD 1348 Query: 87524 VDYVGYLVDRKS 87489 D+ + R+S Sbjct: 1349 SDWQSCPLTRRS 1360 Score = 60.5 bits (144), Expect = 4e-006 Identities = 26/91 (28%), Positives = 45/91 (48%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 S++ G+ I + G Y+ W +L + K KTGFING I P P+ + W + Sbjct: 37 SDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENWTAVNS 96 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 M+ W S+ + + ++++A LW +L Sbjct: 97 MIVGWIRTSIEPKVKATVTFISDAHLLWKDL 127 Score = 57.0 bits (135), Expect = 4e-005 Identities = 53/227 (23%), Positives = 87/227 (37%) Frame = -2 Query: 88551 MDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGL 88372 +DS S HMTG + ++ S+ S+ V +V L Sbjct: 403 LDSGASHHMTGTLSSLTNVVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSL 462 Query: 88371 IHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLVCL 88192 L+S+S+L K+ + + T + LIG ++ + + K+ Sbjct: 463 NCTLISVSKLL-KQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTA 521 Query: 88191 SVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKS 88012 +V + D LWH+RL H S L+ L + + C+ C K + F Sbjct: 522 NV-DSDQALWHQRLGHPSFSVLSSL-----PLFSKTSSTVTSHSCDVCFRAKQTREVFPE 575 Query: 88011 KQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 + C LIH D+ GP RV + +Y +VDDY+R Y+ Sbjct: 576 SINKTEEC-FSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYL 621 Score = 45.7 bits (106), Expect = 0.10 Identities = 36/182 (19%), Positives = 76/182 (40%), Gaps = 7/182 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECI-WERXXXXXXXXXXXXVEKGLLGS 515 Y+ W M A+ + K G ++G+ P+ W +E + + Sbjct: 54 YNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENWTAVNSMIVGWIRTSIEPKVKAT 113 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 + + + A +W +L +RF+ ++ + ++++ Q +V Y+ + LWE++ + Sbjct: 114 VTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCRQDGQAVIEYYGRLSNLWEEYNIY 173 Query: 334 VPTP-----SCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILL-MIPFPLVNQAY 173 P C C + E ++GL+ES L+ M P P + + Y Sbjct: 174 KPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIY 233 Query: 172 LMVMSDESK 146 V+ +E + Sbjct: 234 SRVIREEQR 242 Score = 42.2 bits (97), Expect(2) = 1e-004 Identities = 24/91 (26%), Positives = 43/91 (46%) Frame = +2 Query: 64028 NGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGP 64207 +G + +G L+++++L +LFV S LISV L+ + + +F C +Q Sbjct: 433 DGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDR 492 Query: 64208 SMKSPLEIGRAHNGLYFLCSKCHIPFPNSNV 64300 S K+ + G G+Y+L +NV Sbjct: 493 SSKTLIGSGEERGGVYYLTDVTPAKIHTANV 523 Score = 41.8 bits (96), Expect(2) = 1e-042 Identities = 31/103 (30%), Positives = 48/103 (46%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 LS F MKDLG K LG+++SR + LSQ Y V++ ++P TPL + Sbjct: 1205 LSRCFSMKDLGKLKYFLGIEVSRGPEG--IFLSQRKYALDVIADSGNLGSRPAHTPLEQN 1262 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 L+ + P + + + LV L ++ TRP+ Y Sbjct: 1263 HHLASDDGPLLSDPKPYRRLVGRLL-------YLLHTRPELSY 1298 Score = 32.5 bits (72), Expect(2) = 1e-004 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +3 Query: 63933 IIDSGASNHMTFDKTLLINIIPLP 64004 I+DSGAS+HMT + L N++P+P Sbjct: 402 ILDSGASHHMTGTLSSLTNVVPVP 425 Score = 32.1 bits (71), Expect(3) = 1e-050 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMKGISSIHISFSPKKHFVCTVCPMDR*TRSYF 64663 +S LWH RLGH SF + + + S C VC + TR F Sbjct: 524 DSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVTSHSCDVCFRAKQTREVF 573 >emb|CAB79159.1| (AL161556) LTR retrotransposon like protein [Arabidopsis thaliana] Length = 1109 Score = 173 bits (435), Expect = 3e-040 Identities = 123/404 (30%), Positives = 188/404 (46%), Gaps = 4/404 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + EL + + + LAD +G V + + L L V Y+ ++ + Sbjct: 172 HMTGNLELLSGMRSMSPVLIILADGNKRVAVSEGTVRLGSHL----ILKSVFYVKELESD 227 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGV---IVVARGTNSGTLYTTLGCINMDVVAESVSG 5880 LISVGQ + V + +++ +V G + G N V SV Sbjct: 228 LISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKA 287 Query: 5879 SC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KV 5703 LWH RLGH S K + +L + L K +C++C+ KQ R +F Sbjct: 288 PFDLWHRRLGHASDKIVNLL-PRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRS-MD 345 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 ++ H DVWGP S G+R+++T + D+SR VWVY + S+ K + A VE Q Sbjct: 346 SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQ 405 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 ++K +RSDNG E+ + KGI + G QNG ER ++ + AR++ Sbjct: 406 FDTEIKTVRSDNGTEF--LCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARAL 463 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 R +P FW + + AYLINR PS+ L K E+ + KYSHLR FG Y H Sbjct: 464 RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHN 523 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 K +K ++ +C +GY G+R +D + +K DV F E+ Sbjct: 524 QNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 571 Score = 158 bits (396), Expect(2) = 6e-044 Identities = 88/202 (43%), Positives = 128/202 (62%), Gaps = 7/202 (3%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP +++EA+ + W AM E+ SL N T+ + +LP GKRAL NKWV++IK DG Sbjct: 599 EPTTYNEAMVDK---AWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDG 655 Query: 4605 K-RRFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R+KA LVV G DY E F+PV K++++R+ L + A+ + H+ QMD FLH Sbjct: 656 AIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLH 715 Query: 4440 GDLDKEIYMQQPKGFVV--PGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 GDL +E+YM+ P+GF P K VC+L +SLYGLKQAPR W+ K S + + F ++ Sbjct: 716 GDLKEEVYMKLPQGFQCDDPSK---VCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSL 772 Query: 4266 KDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 D + +V +L+Y+DD++I GS Sbjct: 773 SDYSLFSYNNDGVFVHVLVYVDDLIISGS 801 Score = 142 bits (354), Expect(3) = 1e-050 Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QNG VERKH+H+L +ARAL +QS LP ++WGECIL+ YLINR + +L K+ + Sbjct: 440 VGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPY 499 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++LY P YS+L+VFG LC+ +HK DKF R+ +F+GYP G+++ D +K Sbjct: 500 EMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQK 559 Query: 65337 IHVSRDVSFYENVFPFT 65387 VSRDV F E FP++ Sbjct: 560 FFVSRDVIFQETEFPYS 576 Score = 93.6 bits (229), Expect(2) = 4e-033 Identities = 50/130 (38%), Positives = 82/130 (62%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDNT 87292 LG IS +KKQ +++ S+AEAEY A A +++W+K+ L D G+ ++ + IF D+ Sbjct: 976 LGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSK 1035 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + N VQH+RTKHV++ HF+RD + G I+ +F +Q+ADI T +L + Sbjct: 1036 SAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRY 1095 Query: 87111 NRLELGMMKIN 87079 +LG++ ++ Sbjct: 1096 FLRKLGILDVH 1106 Score = 83.1 bits (202), Expect(3) = 1e-050 Identities = 38/88 (43%), Positives = 58/88 (65%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP+++ S + F L+ D+W PY +++G +YFL IVDD+SR W L+T KS T + Sbjct: 336 FPLRDNRSMDSF-QLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKH 394 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +K F++LV QF IK++R+ NG EF+ Sbjct: 395 LKDFMALVERQFDTEIKTVRSDNGTEFL 422 Score = 77.6 bits (188), Expect(2) = 4e-033 Identities = 40/134 (29%), Positives = 68/134 (49%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL 87702 +G ++ Q+KYV +++ + A+ P+ KL L + YR ++G L+YL Sbjct: 838 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 897 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RP++ +SV A+F NP++ H A R++ YLK G+ S + G+ D Sbjct: 898 AVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 957 Query: 87521 DYVGYLVDRKSTTG 87480 DY + R+S TG Sbjct: 958 DYAACPLTRRSLTG 971 Score = 73.4 bits (177), Expect = 5e-010 Identities = 62/222 (27%), Positives = 94/222 (41%), Gaps = 2/222 (0%) Frame = -2 Query: 88536 SRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGLIHNLL 88357 S HMTGN L + + V+YVK L +L+ Sbjct: 170 SHHMTGNLELLSGMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDLI 229 Query: 88356 SISQLCDKENKVIFRSTGVEVINLNTQKLVL-IGKRDKHIYTVDTSTIYDKKLVCLSVLE 88180 S+ Q+ D+ + V+ + VI T ++V IGKR+ + + + Sbjct: 230 SVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGM----ENAAAVHTSV 285 Query: 88179 KDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQM 88003 K P LWH+RL HAS +N L+ ++L L K + VC+ C K + +F + Sbjct: 286 KAPFDLWHRRLGHASDKIVN-LLPREL---LSSGKEILENVCDTCMRAKQTRDTFPLRDN 341 Query: 88002 VSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 S S +LIH D+ GP R S Y +VDDY+R Y+ Sbjct: 342 RSMD-SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYL 384 Score = 48.8 bits (114), Expect(2) = 6e-044 Identities = 32/108 (29%), Positives = 51/108 (46%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F MKDLG K LG+++SR+ LSQ Y+ ++S + A+P PL + Sbjct: 813 LESCFHMKDLGLLKYFLGIEVSRNAQG--FYLSQRKYVLDIISEMGLLGARPSAFPLEQN 870 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSI 3825 KLS SP + + LV + + TRP+ Y + ++ Sbjct: 871 HKLSLSTSPLLSDSSRYRRLV-------GRLIYLAVTRPELSYSVHTL 911 Score = 44.1 bits (102), Expect = 0.30 Identities = 20/91 (21%), Positives = 43/91 (46%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 ++++G+ I + Y W G + + K GF++G I P S W + Sbjct: 26 ADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINA 85 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 ++ SW ++ +L N+ + + A+ LW+++ Sbjct: 86 LLVSWMKMTIDSELLTNISHRDVARDLWEQI 116 Score = 39.1 bits (89), Expect = 10.0 Identities = 31/125 (24%), Positives = 50/125 (39%), Gaps = 2/125 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPK--DKFLGLECIWERXXXXXXXXXXXXVEKGLLG 518 Y W K A+ R K G LDG+ P+ D LE W ++ LL Sbjct: 43 YEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLED-WLTINALLVSWMKMTIDSELLT 101 Query: 517 SIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEV 338 +I + A D+W + +RF+ + + ++A Q +V Y+ K +W+ Sbjct: 102 NISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNINS 161 Query: 337 VVPTPSC 317 P C Sbjct: 162 YRPLRIC 168 Score = 25.1 bits (53), Expect(3) = 1e-050 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHISFSPKK--HFVCTVCPMDR*TRSYF 64663 LWH RLGH S K+ + + S K+ VC C + TR F Sbjct: 291 LWHRRLGHAS-DKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTF 336 >emb|CAA18107.1| (AL022140) LTR retrotransposon like protein [Arabidopsis thaliana] Length = 1109 Score = 173 bits (435), Expect = 3e-040 Identities = 123/404 (30%), Positives = 188/404 (46%), Gaps = 4/404 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + EL + + + LAD +G V + + L L V Y+ ++ + Sbjct: 172 HMTGNLELLSGMRSMSPVLIILADGNKRVAVSEGTVRLGSHL----ILKSVFYVKELESD 227 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGV---IVVARGTNSGTLYTTLGCINMDVVAESVSG 5880 LISVGQ + V + +++ +V G + G N V SV Sbjct: 228 LISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKA 287 Query: 5879 SC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KV 5703 LWH RLGH S K + +L + L K +C++C+ KQ R +F Sbjct: 288 PFDLWHRRLGHASDKIVNLL-PRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRS-MD 345 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 ++ H DVWGP S G+R+++T + D+SR VWVY + S+ K + A VE Q Sbjct: 346 SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQ 405 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 ++K +RSDNG E+ + KGI + G QNG ER ++ + AR++ Sbjct: 406 FDTEIKTVRSDNGTEF--LCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARAL 463 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 R +P FW + + AYLINR PS+ L K E+ + KYSHLR FG Y H Sbjct: 464 RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHN 523 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 K +K ++ +C +GY G+R +D + +K DV F E+ Sbjct: 524 QNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 571 Score = 158 bits (396), Expect(2) = 6e-044 Identities = 88/202 (43%), Positives = 128/202 (62%), Gaps = 7/202 (3%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP +++EA+ + W AM E+ SL N T+ + +LP GKRAL NKWV++IK DG Sbjct: 599 EPTTYNEAMVDK---AWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDG 655 Query: 4605 K-RRFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R+KA LVV G DY E F+PV K++++R+ L + A+ + H+ QMD FLH Sbjct: 656 AIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLH 715 Query: 4440 GDLDKEIYMQQPKGFVV--PGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 GDL +E+YM+ P+GF P K VC+L +SLYGLKQAPR W+ K S + + F ++ Sbjct: 716 GDLKEEVYMKLPQGFQCDDPSK---VCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSL 772 Query: 4266 KDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 D + +V +L+Y+DD++I GS Sbjct: 773 SDYSLFSYNNDGVFVHVLVYVDDLIISGS 801 Score = 142 bits (354), Expect(3) = 1e-050 Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QNG VERKH+H+L +ARAL +QS LP ++WGECIL+ YLINR + +L K+ + Sbjct: 440 VGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPY 499 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++LY P YS+L+VFG LC+ +HK DKF R+ +F+GYP G+++ D +K Sbjct: 500 EMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQK 559 Query: 65337 IHVSRDVSFYENVFPFT 65387 VSRDV F E FP++ Sbjct: 560 FFVSRDVIFQETEFPYS 576 Score = 93.6 bits (229), Expect(2) = 4e-033 Identities = 50/130 (38%), Positives = 82/130 (62%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDNT 87292 LG IS +KKQ +++ S+AEAEY A A +++W+K+ L D G+ ++ + IF D+ Sbjct: 976 LGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSK 1035 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + N VQH+RTKHV++ HF+RD + G I+ +F +Q+ADI T +L + Sbjct: 1036 SAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRY 1095 Query: 87111 NRLELGMMKIN 87079 +LG++ ++ Sbjct: 1096 FLRKLGILDVH 1106 Score = 83.1 bits (202), Expect(3) = 1e-050 Identities = 38/88 (43%), Positives = 58/88 (65%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP+++ S + F L+ D+W PY +++G +YFL IVDD+SR W L+T KS T + Sbjct: 336 FPLRDNRSMDSF-QLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKH 394 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +K F++LV QF IK++R+ NG EF+ Sbjct: 395 LKDFMALVERQFDTEIKTVRSDNGTEFL 422 Score = 77.6 bits (188), Expect(2) = 4e-033 Identities = 40/134 (29%), Positives = 68/134 (49%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL 87702 +G ++ Q+KYV +++ + A+ P+ KL L + YR ++G L+YL Sbjct: 838 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 897 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RP++ +SV A+F NP++ H A R++ YLK G+ S + G+ D Sbjct: 898 AVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 957 Query: 87521 DYVGYLVDRKSTTG 87480 DY + R+S TG Sbjct: 958 DYAACPLTRRSLTG 971 Score = 73.4 bits (177), Expect = 5e-010 Identities = 62/222 (27%), Positives = 94/222 (41%), Gaps = 2/222 (0%) Frame = -2 Query: 88536 SRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGLIHNLL 88357 S HMTGN L + + V+YVK L +L+ Sbjct: 170 SHHMTGNLELLSGMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDLI 229 Query: 88356 SISQLCDKENKVIFRSTGVEVINLNTQKLVL-IGKRDKHIYTVDTSTIYDKKLVCLSVLE 88180 S+ Q+ D+ + V+ + VI T ++V IGKR+ + + + Sbjct: 230 SVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGM----ENAAAVHTSV 285 Query: 88179 KDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQM 88003 K P LWH+RL HAS +N L+ ++L L K + VC+ C K + +F + Sbjct: 286 KAPFDLWHRRLGHASDKIVN-LLPREL---LSSGKEILENVCDTCMRAKQTRDTFPLRDN 341 Query: 88002 VSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 S S +LIH D+ GP R S Y +VDDY+R Y+ Sbjct: 342 RSMD-SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYL 384 Score = 48.8 bits (114), Expect(2) = 6e-044 Identities = 32/108 (29%), Positives = 51/108 (46%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F MKDLG K LG+++SR+ LSQ Y+ ++S + A+P PL + Sbjct: 813 LESCFHMKDLGLLKYFLGIEVSRNAQG--FYLSQRKYVLDIISEMGLLGARPSAFPLEQN 870 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSI 3825 KLS SP + + LV + + TRP+ Y + ++ Sbjct: 871 HKLSLSTSPLLSDSSRYRRLV-------GRLIYLAVTRPELSYSVHTL 911 Score = 44.1 bits (102), Expect = 0.30 Identities = 20/91 (21%), Positives = 43/91 (46%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 ++++G+ I + Y W G + + K GF++G I P S W + Sbjct: 26 ADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINA 85 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 ++ SW ++ +L N+ + + A+ LW+++ Sbjct: 86 LLVSWMKMTIDSELLTNISHRDVARDLWEQI 116 Score = 39.1 bits (89), Expect = 10.0 Identities = 31/125 (24%), Positives = 50/125 (39%), Gaps = 2/125 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPK--DKFLGLECIWERXXXXXXXXXXXXVEKGLLG 518 Y W K A+ R K G LDG+ P+ D LE W ++ LL Sbjct: 43 YEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLED-WLTINALLVSWMKMTIDSELLT 101 Query: 517 SIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEV 338 +I + A D+W + +RF+ + + ++A Q +V Y+ K +W+ Sbjct: 102 NISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNINS 161 Query: 337 VVPTPSC 317 P C Sbjct: 162 YRPLRIC 168 Score = 25.1 bits (53), Expect(3) = 1e-050 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHISFSPKK--HFVCTVCPMDR*TRSYF 64663 LWH RLGH S K+ + + S K+ VC C + TR F Sbjct: 291 LWHRRLGHAS-DKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTF 336 >dbj|BAB10743.1| (AB010695) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1109 Score = 171 bits (430), Expect = 1e-039 Identities = 122/404 (30%), Positives = 189/404 (46%), Gaps = 4/404 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + EL + + + + LAD +G V + + L L V Y+ ++ + Sbjct: 172 HMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHL----ILKSVFYVKELESD 227 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGV---IVVARGTNSGTLYTTLGCINMDVVAESVSG 5880 LISVGQ + V + +++ +V G + G N V SV Sbjct: 228 LISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKA 287 Query: 5879 SC-LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KV 5703 LWH RLGH S K + +L + L K +C++C+ KQ R +F + Sbjct: 288 PFDLWHRRLGHASDKIVNLL-PRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRS-MD 345 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 ++ H DVWGP S G+R+++T + D+SR VWVY + S+ K + A VE Q Sbjct: 346 SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQ 405 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 ++K +RSDNG E+ + KGI + G QNG ER ++ + AR++ Sbjct: 406 FDTEIKTVRSDNGTEF--LCMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNIARAL 463 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 R +P FW + + AYLINR PS+ L K E+ + YSHLR FG Y H Sbjct: 464 RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHN 523 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 K +K ++ +C +GY G+R +D + +K DV F E+ Sbjct: 524 QNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 571 Score = 158 bits (396), Expect(2) = 6e-044 Identities = 88/202 (43%), Positives = 128/202 (62%), Gaps = 7/202 (3%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP +++EA+ + W AM E+ SL N T+ + +LP GKRAL NKWV++IK DG Sbjct: 599 EPTTYNEAMVDK---AWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDG 655 Query: 4605 K-RRFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R+KA LVV G DY E F+PV K++++R+ L + A+ + H+ QMD FLH Sbjct: 656 AIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLH 715 Query: 4440 GDLDKEIYMQQPKGFVV--PGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 GDL +E+YM+ P+GF P K VC+L +SLYGLKQAPR W+ K S + + F ++ Sbjct: 716 GDLKEEVYMKLPQGFQCDDPSK---VCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSL 772 Query: 4266 KDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 D + +V +L+Y+DD++I GS Sbjct: 773 SDYSLFSYNNDGVFVHVLVYVDDLIISGS 801 Score = 141 bits (352), Expect(3) = 2e-050 Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QNG VERKH+H+L +ARAL +QS LP ++WGECIL+ YLINR + +L K+ + Sbjct: 440 VGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPY 499 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++LY P YS+L+VFG LC+ +HK DKF R+ +F+GYP G+++ D +K Sbjct: 500 EMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQK 559 Query: 65337 IHVSRDVSFYENVFPFT 65387 VSRDV F E FP++ Sbjct: 560 FFVSRDVIFQETEFPYS 576 Score = 94.0 bits (230), Expect(2) = 3e-033 Identities = 51/130 (39%), Positives = 82/130 (62%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDNT 87292 LG IS +KKQ +V+ S+AEAEY A A +++W+K+ L D G+ ++ + IF D+ Sbjct: 976 LGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSK 1035 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + N VQH+RTKHV++ HF+RD + G I+ +F +Q+ADI T +L + Sbjct: 1036 SAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRY 1095 Query: 87111 NRLELGMMKIN 87079 +LG++ ++ Sbjct: 1096 FLRKLGILDVH 1106 Score = 83.1 bits (202), Expect(3) = 2e-050 Identities = 38/88 (43%), Positives = 57/88 (64%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP+ + S + F L+ D+W PY +++G +YFL IVDD+SR W L+T KS T + Sbjct: 336 FPLSDNRSMDSF-QLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKH 394 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +K F++LV QF IK++R+ NG EF+ Sbjct: 395 LKDFIALVERQFDTEIKTVRSDNGTEFL 422 Score = 77.6 bits (188), Expect(2) = 3e-033 Identities = 40/134 (29%), Positives = 68/134 (49%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL 87702 +G ++ Q+KYV +++ + A+ P+ KL L + YR ++G L+YL Sbjct: 838 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 897 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RP++ +SV A+F NP++ H A R++ YLK G+ S + G+ D Sbjct: 898 AVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 957 Query: 87521 DYVGYLVDRKSTTG 87480 DY + R+S TG Sbjct: 958 DYAACPLTRRSLTG 971 Score = 72.6 bits (175), Expect = 8e-010 Identities = 62/222 (27%), Positives = 93/222 (40%), Gaps = 2/222 (0%) Frame = -2 Query: 88536 SRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGLIHNLL 88357 S HMTGN L + + V+YVK L +L+ Sbjct: 170 SHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDLI 229 Query: 88356 SISQLCDKENKVIFRSTGVEVINLNTQKLVL-IGKRDKHIYTVDTSTIYDKKLVCLSVLE 88180 S+ Q+ D+ + V+ + VI T ++V IGKR+ + + + Sbjct: 230 SVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGM----ENAAAVHTSV 285 Query: 88179 KDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSKQM 88003 K P LWH+RL HAS +N L+ ++L L K + VC+ C K + +F Sbjct: 286 KAPFDLWHRRLGHASDKIVN-LLPREL---LSSGKEILENVCDTCMRAKQTRDTFPLSDN 341 Query: 88002 VSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 S S +LIH D+ GP R S Y +VDDY+R Y+ Sbjct: 342 RSMD-SFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYL 384 Score = 48.8 bits (114), Expect(2) = 6e-044 Identities = 32/108 (29%), Positives = 51/108 (46%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F MKDLG K LG+++SR+ LSQ Y+ ++S + A+P PL + Sbjct: 813 LESCFHMKDLGLLKYFLGIEVSRNAQG--FYLSQRKYVLDIISEMGLLGARPSAFPLEQN 870 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSI 3825 KLS SP + + LV + + TRP+ Y + ++ Sbjct: 871 HKLSLSTSPLLSDSSRYRRLV-------GRLIYLAVTRPELSYSVHTL 911 Score = 44.1 bits (102), Expect = 0.30 Identities = 20/91 (21%), Positives = 43/91 (46%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 ++++G+ I + Y W G + + K GF++G I P S W + Sbjct: 26 ADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINA 85 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 ++ SW ++ +L N+ + + A+ LW+++ Sbjct: 86 LLVSWMKMTIDSELLTNISHRDVARDLWEQI 116 Score = 25.1 bits (53), Expect(3) = 2e-050 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHISFSPKK--HFVCTVCPMDR*TRSYF 64663 LWH RLGH S K+ + + S K+ VC C + TR F Sbjct: 291 LWHRRLGHAS-DKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTF 336 >dbj|BAA81872.1| (AB026295) EST D24315(R1718) corresponds to a region of the predicted gene.; Similar to Tobacco DNA for retroviral-like transposon Tnt 1-94.(X13777) [Oryza sativa] Length = 1600 Score = 206 bits (520), Expect = 3e-050 Identities = 126/403 (31%), Positives = 196/403 (48%), Gaps = 6/403 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + +E F F G V D +EI+G G V R L V YIP ++ + Sbjct: 519 HMTCRREFFTEFDSSVRGSVKFGDASGVEIKGVGSVTFTAKSGEHRLLTGVYYIPALRNS 578 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIV----KGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 +ISVGQ D G + G +I + + V RGTN + + + + A Sbjct: 579 IISVGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLYILSAQVAQPVCLAARRDD 638 Query: 5882 GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM--GLCESCVMGKQKRVSFTKTPREP* 5709 + WH R GH+ + +K L AK + G+ D LC+ CV+ KQ+R+ F + Sbjct: 639 EAWQWHERFGHLHFEALKRLSAKEMVRGMPCLDHVEQLCDVCVVTKQRRLPFPQQTSFRA 698 Query: 5708 KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVE 5529 K LK+ H D+ GP ++ GG R+++ + D SR +WV L + ++ +A E Sbjct: 699 KERLKLVHGDLCGPVTPATPGGRRYFLLLVDDLSRYMWVMVLGSKGEAADAIRRAQAAAE 758 Query: 5528 NQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHAR 5349 + K++ LR+DNGGE+ + F ++CA +GI+ P +QNG+ ER N+ + AR Sbjct: 759 AECGRKLRVLRTDNGGEFTAAEFASYCADEGIQRHYTAPYSPQQNGVVERRNQTVVGMAR 818 Query: 5348 SMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYV 5169 ++ GMP FW V T Y++NR P+ L + E W + SHLR FGC + Sbjct: 819 ALLKQRGMPAIFWGEAVVTAVYILNRSPTKALDGRTPYEAWHGHKPAVSHLRVFGCLAFA 878 Query: 5168 HVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + KL+ ++ IGY YR D + +++ DV FDE Sbjct: 879 K-ELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQRVRTARDVVFDE 926 Score = 163 bits (409), Expect(2) = 2e-046 Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 5/212 (2%) Frame = -2 Query: 4803 LLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRI 4624 L D+GEP SF EA E W AM EM ++++N TW L DLP G RA+ KWVF++ Sbjct: 1078 LACDDGEPRSFAEA---EKHAAWRAAMQSEMDAVQENRTWELADLPRGHRAITLKWVFKL 1134 Query: 4623 KT*PDGKR-RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDE 4459 K G + KA LV +G DY + F+PV ++ S+R+L + A E + MD Sbjct: 1135 KRDEAGAIVKHKARLVARGFVQQEGIDYDDAFAPVARMESVRLLFALAAQEGWGVHHMDV 1194 Query: 4458 KTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 K+ FL+GDL +E+Y+ QP GFV+PGKE V +L ++LYGL+QAPR W K DS + F Sbjct: 1195 KSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQAPRAWNAKLDSTLKGMGF 1254 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRE 4168 ++ + Y + + + + +Y+DD++I G+ E Sbjct: 1255 EQSPHEAAIYRRGIGGNALLVGVYVDDLVITGTKDAE 1291 Score = 110 bits (272), Expect(3) = 3e-030 Identities = 50/129 (38%), Positives = 81/129 (62%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ QQNG VER+++ ++ +ARALL Q +PA +WGE ++T Y++NR L + ++ Sbjct: 798 YSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEAVVTAVYILNRSPTKALDGRTPYE 857 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + PA S+L+VFGCL F H K + R+TP +F+GY + Y++LD T+++ Sbjct: 858 AWHGHKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQRVR 917 Query: 65343 VSRDVSFYE 65369 +RDV F E Sbjct: 918 TARDVVFDE 926 Score = 102 bits (252), Expect(2) = 8e-041 Identities = 53/133 (39%), Positives = 83/133 (61%), Gaps = 1/133 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF-GLKIEQVPIFCDN 87295 FLG CL+S S KQ VALS+ EAEY+AA+ Q LW+ + LSD G V + D+ Sbjct: 1462 FLGECLVSWQSIKQQVVALSSCEAEYMAASAASTQALWLARLLSDLLGRDTGAVELRVDS 1521 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SA+ + KN V H+R+KH+ +R+HF+R +E+G I ++ ++Q+AD+ T L R F Sbjct: 1522 KSALALAKNPVFHERSKHIRVRYHFIRSYLEEGSIKASYINTKDQLADLLTKPLGRIKFL 1581 Query: 87114 RNRLELGMMKINYE 87073 +GM +++++ Sbjct: 1582 ELCSRIGMAQLSHK 1595 Score = 94.4 bits (231), Expect(2) = 8e-041 Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 1/134 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G + Q Y K +++ + D TP+ KL + V+ YR ++GSL YLT Sbjct: 1325 GITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLT 1384 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLK-GSNFDLVGYADV 87522 +RPD+ FSVG +RF P H QAVKRI+ Y+ GT D G++Y + VGY+D Sbjct: 1385 HTRPDLAFSVGYVSRFMQRPTTEHQQAVKRIIRYVAGTLDHGLYYPRCPGKAHFVGYSDS 1444 Query: 87521 DYVGYLVDRKSTTGM 87477 D+ G + KST+G+ Sbjct: 1445 DHAGDIDTSKSTSGI 1459 Score = 81.9 bits (199), Expect = 1e-012 Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 5/223 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXX---XXXXXGRSDEHSI-DKV 88390 WY+D+ + HMT + F + +S EH + V Sbjct: 510 WYLDTGATHHMTCRREFFTEFDSSVRGSVKFGDASGVEIKGVGSVTFTAKSGEHRLLTGV 569 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 YY+ L ++++S+ QL + ++V+ + + + + L + + +Y + Sbjct: 570 YYIPALRNSIISVGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLYILSAQVAQP 629 Query: 88209 KKLVCLSVLEKDPLL-WHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 VCL+ D WH+R H L +L K++V G+P E ++C+ C + K Sbjct: 630 ---VCLAARRDDEAWQWHERFGHLHFEALKRLSAKEMVRGMPCLDHVE-QLCDVCVVTKQ 685 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 + F + + L+L+H DLCGP+ + G + Y +LVDD +R Sbjct: 686 RRLPFPQQTSFRAKERLKLVHGDLCGPVTPATPGGRRYFLLLVDDLSR 733 Score = 65.2 bits (156), Expect = 1e-007 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 1/144 (0%) Frame = -1 Query: 90190 YNEADYKMLGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIA 90011 Y + DY ++ +A L+ + P+ +S +AK+ WD + + G+ + RK + Sbjct: 208 YGDVDYD---EDRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQ 264 Query: 90010 SLCSEYEAFKMKSGKSLQDMITRFTTVINELISLG-KVYTTEEQVDKVLRIFPRSWEIKV 89834 +L E+E K G+ + D R T++ +++ G Y E V+K+ R P + Sbjct: 265 ALRKEWENLAFKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIA 324 Query: 89833 TAIREAKDLTNMTLDELVRNLKTYE 89759 +I DL+ M+++E + LK + Sbjct: 325 RSIESLLDLSTMSIEEALGRLKVVD 349 Score = 52.3 bits (123), Expect(2) = 2e-046 Identities = 30/100 (30%), Positives = 49/100 (49%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 + A F+M DLGP LG+++ +D S TL Q Y ++V+ + D P TP+ Sbjct: 1299 MKATFQMSDLGPLSFYLGIEVHQDNSGITLR--QTAYAKRVVELAGLTDCNPALTPMEER 1356 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 KLS++ + + V+ + LV + + TRPD Sbjct: 1357 LKLSRDSTAEEVDATQYRRLV-------GSLRYLTHTRPD 1389 Score = 46.5 bits (108), Expect(3) = 3e-030 Identities = 28/95 (29%), Positives = 43/95 (44%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP + + + L+ DL P T G +YFL++VDD SR W +L K Sbjct: 690 FPQQTSFRAKERLKLVHGDLCGPVTPATPGGRRYFLLLVDDLSRYMWVMVLGSKGEAADA 749 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIY 64944 I+ + + ++ +RT NG EF + E Y Sbjct: 750 IRRAQAAAEAECGRKLRVLRTDNGGEFTAAEFASY 784 Score = 24.7 bits (52), Expect(3) = 3e-030 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 Query: 64532 WHNRLGHVSFIKMKGISS 64585 WH R GH+ F +K +S+ Sbjct: 643 WHERFGHLHFEALKRLSA 660 >gb|AAG12110.1|AC079730_6 (AC079730) hypothetical protein; 41436-36997 [Arabidopsis thaliana] Length = 1444 Score = 167 bits (418), Expect = 3e-038 Identities = 120/404 (29%), Positives = 182/404 (44%), Gaps = 1/404 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + EL + + + + LAD +G V + + L L V Y+ ++ + Sbjct: 407 HMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHL----ILKSVFYVKELESD 462 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC- 5874 LISVGQ + C+N V SV Sbjct: 463 LISVGQMMDENH--------------------------------CVNAAAVHTSVKAPFD 490 Query: 5873 LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLK 5694 LWH RLGH S K + +L + L K +C++C+ KQ R +F + + Sbjct: 491 LWHRRLGHASDKIVNLL-PRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRS-MDSFQ 548 Query: 5693 MTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSL 5514 + H DVWGP S G+R+++T + D+SR VWVY + S+ K + A VE Q Sbjct: 549 LIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDT 608 Query: 5513 KVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRIN 5334 ++K +RSDNG E+ + KGI + G QNG ER ++ + AR++R Sbjct: 609 EIKIVRSDNGTEF--LCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQ 666 Query: 5333 CGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPE 5154 +P FW + + AYLINR PS+ L K E+ + KYSHLR FG Y H Sbjct: 667 SYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNH 726 Query: 5153 KRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 K +K ++ +C +GY G+R +D + +K DV F E+ Sbjct: 727 KGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 771 Score = 158 bits (396), Expect(2) = 2e-044 Identities = 88/202 (43%), Positives = 128/202 (62%), Gaps = 7/202 (3%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP +++EA+ + W AM E+ SL N T+ + +LP GKRAL NKWV++IK DG Sbjct: 934 EPTTYNEAMVDK---AWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDG 990 Query: 4605 K-RRFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R+KA LVV G DY E F+PV K++++R+ L + A+ + H+ QMD FLH Sbjct: 991 AIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLH 1050 Query: 4440 GDLDKEIYMQQPKGFVV--PGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAE 4267 GDL +E+YM+ P+GF P K VC+L +SLYGLKQAPR W+ K S + + F ++ Sbjct: 1051 GDLKEEVYMKLPQGFQCDDPSK---VCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSL 1107 Query: 4266 KDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 D + +V +L+Y+DD++I GS Sbjct: 1108 SDYSLFSYNNDGIFVHVLVYVDDLIISGS 1136 Score = 142 bits (354), Expect(3) = 3e-050 Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QNG VERKH+H+L +ARAL +QS LP ++WGECIL+ YLINR + +L K+ + Sbjct: 640 VGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPY 699 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSHK-DKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++LY P YS+L+VFG LC+ +HK DKF R+ +F+GYP G+++ D +K Sbjct: 700 EMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQK 759 Query: 65337 IHVSRDVSFYENVFPFT 65387 VSRDV F E FP++ Sbjct: 760 FFVSRDVIFQETEFPYS 776 Score = 94.0 bits (230), Expect(2) = 3e-033 Identities = 51/130 (39%), Positives = 82/130 (62%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDNT 87292 LG IS +KKQ +V+ S+AEAEY A A +++W+K+ L D G+ ++ + IF D+ Sbjct: 1311 LGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSK 1370 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI + N VQH+RTKHV++ HF+RD + G I+ +F +Q+ADI T +L + Sbjct: 1371 SAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRY 1430 Query: 87111 NRLELGMMKIN 87079 +LG++ ++ Sbjct: 1431 FLRKLGILDVH 1441 Score = 81.9 bits (199), Expect(3) = 3e-050 Identities = 38/88 (43%), Positives = 56/88 (63%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP+ + S + F L+ D+W PY +++G +YFL IVDD+SR W L+T KS T + Sbjct: 536 FPLSDNRSMDSF-QLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKH 594 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +K F++LV QF IK +R+ NG EF+ Sbjct: 595 LKDFIALVERQFDTEIKIVRSDNGTEFL 622 Score = 77.6 bits (188), Expect(2) = 3e-033 Identities = 40/134 (29%), Positives = 68/134 (49%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYL 87702 +G ++ Q+KYV +++ + A+ P+ KL L + YR ++G L+YL Sbjct: 1173 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 1232 Query: 87701 TASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADV 87522 +RP++ +SV A+F NP++ H A R++ YLK G+ S + G+ D Sbjct: 1233 VVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 1292 Query: 87521 DYVGYLVDRKSTTG 87480 DY + R+S TG Sbjct: 1293 DYAACPLTRRSLTG 1306 Score = 64.4 bits (154), Expect = 2e-007 Identities = 59/229 (25%), Positives = 85/229 (36%), Gaps = 1/229 (0%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVK 88378 W +D+ S HMTGN L + + V+YVK Sbjct: 398 WILDTGASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVK 457 Query: 88377 GLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLV 88198 L +L+S+ Q+ D+ + V + V TS Sbjct: 458 ELESDLISVGQMMDENHCV-------------------------NAAAVHTSV------- 485 Query: 88197 CLSVLEKDPL-LWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSS 88021 K P LWH+RL HAS +N L+ ++L L K + VC+ C K + + Sbjct: 486 ------KAPFDLWHRRLGHASDKIVN-LLPREL---LSSGKEILENVCDTCMRAKQTRDT 535 Query: 88020 FKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 F S S +LIH D+ GP R S Y +VDDY+R Y+ Sbjct: 536 FPLSDNRSMD-SFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYL 584 Score = 50.4 bits (118), Expect(2) = 2e-044 Identities = 33/108 (30%), Positives = 52/108 (47%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F MKDLG K LG+++SR+ LSQ Y+ ++S + A+P PL + Sbjct: 1148 LESCFHMKDLGLLKYFLGIEVSRNAQG--FYLSQRKYVLDIISEMGLLGARPSAFPLEQN 1205 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSI 3825 KLS SP + + LV + +V TRP+ Y + ++ Sbjct: 1206 HKLSLSTSPLLSDSSRYRRLV-------GRLIYLVVTRPELSYSVHTL 1246 Score = 48.0 bits (112), Expect = 0.020 Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 8/180 (4%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPK--DKFLGLECIWERXXXXXXXXXXXXVEKGLLG 518 Y W K A+ R K G LDG+ P+ D LE W ++ LL Sbjct: 43 YEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLED-WLTINALLVSWMKMTIDSELLT 101 Query: 517 SIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEV 338 +I + A D+W + +RF+ + + ++A Q +V Y+ K +W+ Sbjct: 102 NISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNINS 161 Query: 337 VVPTPSCECER-----SKEYVVNXXXXXXXXXLMGLNES-YI*ARSQILLMIPFPLVNQA 176 P C+C R + L GLNE+ + RS + +P P + + Sbjct: 162 YRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLEEV 221 Query: 175 YLMVMSDE 152 Y +V +E Sbjct: 222 YNIVRQEE 229 Score = 44.1 bits (102), Expect = 0.30 Identities = 20/91 (21%), Positives = 43/91 (46%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 ++++G+ I + Y W G + + K GF++G I P S W + Sbjct: 26 ADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINA 85 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 ++ SW ++ +L N+ + + A+ LW+++ Sbjct: 86 LLVSWMKMTIDSELLTNISHRDVARDLWEQI 116 Score = 25.1 bits (53), Expect(3) = 3e-050 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGISSIHISFSPKK--HFVCTVCPMDR*TRSYF 64663 LWH RLGH S K+ + + S K+ VC C + TR F Sbjct: 491 LWHRRLGHAS-DKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTF 536 >gb|AAD29756.1|AF076243_3 (AF076243) putative transposon protein [Arabidopsis thaliana] Length = 570 Score = 191 bits (480), Expect(2) = 3e-050 Identities = 102/228 (44%), Positives = 143/228 (61%), Gaps = 5/228 (2%) Frame = -2 Query: 4827 YSHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRAL 4648 ++ +L+ ++ EP F EA + ++ KW M+DEM SL KN TW + D P ++ Sbjct: 155 FAFALYTTEEVESEEPSYFHEATEDKNWEKWNGGMNDEMNSLWKNFTWDIVDRPKDQK-- 212 Query: 4647 LNKWVFRIKT*PDGKRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENM 4480 R+KA LV +G DY E+F+PVVK TSIR+L+ IVA +++ Sbjct: 213 ----------------RYKARLVARGFTQRKGIDYDEVFAPVVKHTSIRVLMSIVAQDDL 256 Query: 4479 HLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDS 4300 LEQMD KT FLHGDLDK +YM+QP+G+VV + VC L +SLYGLKQAPRQW KKF+S Sbjct: 257 ELEQMDVKTAFLHGDLDKPLYMEQPEGYVVDESKDQVCLLKKSLYGLKQAPRQWNKKFNS 316 Query: 4299 FMTKSEFCKAEKDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 F+ F +++ D C Y K+ + YV+LLLY+D ML+ SM E N + + + Sbjct: 317 FIMDQNFTRSDHDSCVYIKEVNPDEYVYLLLYVDGMLLVAKSMVEINKIKEAL 369 Score = 80.0 bits (194), Expect(2) = 2e-014 Identities = 38/117 (32%), Positives = 68/117 (57%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S S QN++A+ T EAEYVA + LW++ L D G+K ++V ++ D+ Sbjct: 454 VGGNTVSWKSNLQNTIAIPTTEAEYVAITEAVKEALWMQGLLKDMGVKQDKVLVWSDSQC 513 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHF 87118 I++ K + H+RTKH+ +++HF+RD +E G + + + AD+ T + + F Sbjct: 514 VISLSKKNMFHERTKHIAVKYHFIRDVIENGDVEVLKIHTSQNPADMLTKVIPVQKF 570 Score = 53.1 bits (125), Expect = 6e-004 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = -3 Query: 5297 STVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAV 5124 ST AYLI R PS + + EE+W+ ++ Y HLR FG Y ++D K +KAV Sbjct: 39 STAAYLIKRSPSTAIDHNVPEELWLNRKPGYKHLRKFGSVAYANLDQGKLKPRTLKAV 96 Score = 37.1 bits (84), Expect(2) = 3e-050 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQE 4044 LS FEMKD+GPA +ILG+ I ++R +L E Sbjct: 369 LSQGFEMKDMGPASRILGVDIIKNRKEASLKNEDE 403 Score = 28.6 bits (62), Expect(2) = 2e-014 Identities = 14/31 (45%), Positives = 18/31 (57%) Frame = -3 Query: 87572 VWYLKGSNFDLVGYADVDYVGYLVDRKSTTG 87480 V Y S F + G++D DY L R+STTG Sbjct: 419 VMYAMESVFRIQGFSDSDYAADLDKRRSTTG 449 >emb|CAB77912.1| (AL161500) putative transposon protein [Arabidopsis thaliana] Length = 570 Score = 191 bits (480), Expect(2) = 3e-050 Identities = 102/228 (44%), Positives = 143/228 (61%), Gaps = 5/228 (2%) Frame = -2 Query: 4827 YSHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRAL 4648 ++ +L+ ++ EP F EA + ++ KW M+DEM SL KN TW + D P ++ Sbjct: 155 FAFALYTTEEVESEEPSYFHEATEDKNWEKWNGGMNDEMNSLWKNFTWDIVDRPKDQK-- 212 Query: 4647 LNKWVFRIKT*PDGKRRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENM 4480 R+KA LV +G DY E+F+PVVK TSIR+L+ IVA +++ Sbjct: 213 ----------------RYKARLVARGFTQRKGIDYDEVFAPVVKHTSIRVLMSIVAQDDL 256 Query: 4479 HLEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDS 4300 LEQMD KT FLHGDLDK +YM+QP+G+VV + VC L +SLYGLKQAPRQW KKF+S Sbjct: 257 ELEQMDVKTAFLHGDLDKPLYMEQPEGYVVDESKDQVCLLKKSLYGLKQAPRQWNKKFNS 316 Query: 4299 FMTKSEFCKAEKDPCCYFKKYT-NSYVFLLLYLDDMLIEGSSMRENNNLDKVV 4144 F+ F +++ D C Y K+ + YV+LLLY+D ML+ SM E N + + + Sbjct: 317 FIMDQNFTRSDHDSCVYIKEVNPDEYVYLLLYVDGMLLVAKSMVEINKIKEAL 369 Score = 80.0 bits (194), Expect(2) = 2e-014 Identities = 38/117 (32%), Positives = 68/117 (57%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 +G +S S QN++A+ T EAEYVA + LW++ L D G+K ++V ++ D+ Sbjct: 454 VGGNTVSWKSNLQNTIAIPTTEAEYVAITEAVKEALWMQGLLKDMGVKQDKVLVWSDSQC 513 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHF 87118 I++ K + H+RTKH+ +++HF+RD +E G + + + AD+ T + + F Sbjct: 514 VISLSKKNMFHERTKHIAVKYHFIRDVIENGDVEVLKIHTSQNPADMLTKVIPVQKF 570 Score = 53.1 bits (125), Expect = 6e-004 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = -3 Query: 5297 STVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAV 5124 ST AYLI R PS + + EE+W+ ++ Y HLR FG Y ++D K +KAV Sbjct: 39 STAAYLIKRSPSTAIDHNVPEELWLNRKPGYKHLRKFGSVAYANLDQGKLKPRTLKAV 96 Score = 37.1 bits (84), Expect(2) = 3e-050 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQE 4044 LS FEMKD+GPA +ILG+ I ++R +L E Sbjct: 369 LSQGFEMKDMGPASRILGVDIIKNRKEASLKNEDE 403 Score = 28.6 bits (62), Expect(2) = 2e-014 Identities = 14/31 (45%), Positives = 18/31 (57%) Frame = -3 Query: 87572 VWYLKGSNFDLVGYADVDYVGYLVDRKSTTG 87480 V Y S F + G++D DY L R+STTG Sbjct: 419 VMYAMESVFRIQGFSDSDYAADLDKRRSTTG 449 >gb|AAD26943.1|AC007134_1 (AC007134) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1454 Score = 194 bits (489), Expect = 1e-046 Identities = 127/405 (31%), Positives = 195/405 (47%), Gaps = 4/405 (0%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H S + LF + V L ++I G G + L + L +V +IP + N Sbjct: 440 HVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTL----KLNDDILLKNVLFIPEFRLN 495 Query: 6050 LISVGQF-DSTGYAAVFGKGSWKI---VKGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 LIS+ D G +F K S +I +KG ++ +G LY L + + +V Sbjct: 496 LISISSLTDDIGSRVIFDKNSCEIQDLIKGRML-GQGRRVANLYL-LDVGDQSISVNAVV 553 Query: 5882 GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KV 5703 +WH RLGH S + + + K+ C C + KQ+++SF T + K Sbjct: 554 DISMWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFP-TSNKVCKE 612 Query: 5702 LLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQ 5523 + + H DVWGP V ++ G ++++T + D SR W+Y LK S+V F + +VENQ Sbjct: 613 IFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQ 672 Query: 5522 SSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSM 5343 +KVK +RSDN E FT+F A KGI + P QN + ER ++ + AR++ Sbjct: 673 YKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARAL 729 Query: 5342 RINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHV 5163 +P + W + V T +LINR PS L K E+ Y LRTFGC Y Sbjct: 730 MFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSST 789 Query: 5162 DPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV 5016 P++R+K ++ C +GY S GY+ D ++ + +V F E V Sbjct: 790 SPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEV 838 Score = 161 bits (403), Expect(2) = 1e-040 Identities = 89/202 (44%), Positives = 134/202 (66%), Gaps = 11/202 (5%) Frame = -2 Query: 4782 PESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK 4603 P ++ EA +D+ +W A+D E+ ++EK +TW +T LP GK+A+ KWVF +K DG Sbjct: 940 PTNYAEA---QDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGN 996 Query: 4602 -RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHG 4438 R+KA LV KG DY + FSPV K+T+I++LL + AS+ L+Q+D FL+G Sbjct: 997 LERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNG 1056 Query: 4437 DLDKEIYMQQP------KGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFC 4276 +L++EI+M+ P KG V+P ++V +L RS+YGLKQA RQW+KKF S + F Sbjct: 1057 ELEEEIFMKIPEGYAERKGIVLPS--NVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFK 1114 Query: 4275 KAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 K D + K Y +V +L+Y+DD++I +S Sbjct: 1115 KTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTS 1147 Score = 138 bits (345), Expect(3) = 5e-050 Identities = 61/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN VERKH+H+L VARAL++QS++P WG+C+LT +LINR + +L NK +++ Sbjct: 708 TPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEI 767 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L P Y L+ FGCLC+ T + KF+PR+ +FLGYP GYK++D + + Sbjct: 768 LTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVF 827 Query: 65343 VSRDVSFYENVFP 65381 +SR+V F+E VFP Sbjct: 828 ISRNVQFHEEVFP 840 Score = 93.2 bits (228), Expect(2) = 2e-035 Identities = 50/138 (36%), Positives = 76/138 (54%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 T G I Q+KY ELL+ M K + P+ P K+ + + + YR ++G L+ Sbjct: 1181 TTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLM 1240 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YLT +RPDI F+V +F + P+ +H+ A R+L Y+KGT G++Y S+ L G+A Sbjct: 1241 YLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFA 1300 Query: 87527 DVDYVGYLVDRKSTTGMT 87474 D D+ R+STT T Sbjct: 1301 DSDWASCQDSRRSTTSFT 1318 Score = 86.6 bits (211), Expect = 5e-014 Identities = 62/233 (26%), Positives = 110/233 (46%), Gaps = 1/233 (0%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 S W +DS + H++ +++LF SL+ +D+ + V Sbjct: 427 SSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNV 486 Query: 88389 YYVKGLIHNLLSISQLCDK-ENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIY 88213 ++ NL+SIS L D ++VIF E+ +L +++ G+R ++Y +D Sbjct: 487 LFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVG--- 543 Query: 88212 DKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 D+ + +V+ D +WH+RL HAS +L+ + +G ++K K C C L K Sbjct: 544 DQSISVNAVV--DISMWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHLAKQ 598 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 K SF + V +L+H+D+ GP V++ Y +VDD++R T Y+ Sbjct: 599 RKLSFPTSNKVCKEI-FDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYL 651 Score = 85.8 bits (209), Expect(2) = 2e-035 Identities = 46/130 (35%), Positives = 76/130 (58%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 F+G LIS SKKQ++V+ S+AEAEY A AL +++W+ L ++ D+T Sbjct: 1320 FVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPILYSDST 1379 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 +AI I N V H+RTKH+ + H +R+ ++ G++ + E+Q+ADI T L FE Sbjct: 1380 AAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEH 1439 Query: 87111 NRLELGMMKI 87082 + ++ ++ I Sbjct: 1440 LKSKMSILNI 1449 Score = 83.5 bits (203), Expect(3) = 5e-050 Identities = 46/113 (40%), Positives = 62/113 (54%) Frame = +1 Query: 64615 FCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRS 64794 FC H + + FP N FDLL +D+W P+ V T GYKYFL IVDD SR+ Sbjct: 589 FC-HVCHLAKQRKLSFPTSNKVCKE-IFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRA 646 Query: 64795 TWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 TW LL KS L +F+ V NQ++V +K++R+ N E T+ Y +K Sbjct: 647 TWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPEL--KFTSFYAEK 697 Score = 76.1 bits (184), Expect = 7e-011 Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 3/182 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDG--SCPKDKFLGLECIWERXXXXXXXXXXXXVEKGLLG 518 Y W M +++ +NK G +DG S P + L +W R V + Sbjct: 84 YGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFR-LWSRCNSMVKSWLLNSVSPQIYR 142 Query: 517 SIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEV 338 SI+ A D+W +L RFN + T+NL QEI + QGT S+ Y+++ K LW++ + Sbjct: 143 SILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDS 202 Query: 337 VVPTPS-CECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVM 161 C C ++ L GLNESY R QI+ P + + Y ++ Sbjct: 203 TEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGEVYHILD 262 Query: 160 SDESK 146 D S+ Sbjct: 263 QDNSQ 267 Score = 72.6 bits (175), Expect = 8e-010 Identities = 33/100 (33%), Positives = 53/100 (53%) Frame = +3 Query: 62745 SNNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAA 62924 + + F++H ++ G I+ T Y W +L S KNKTGFI+G ++ P Sbjct: 58 TQSPFFLHSADHPGLNIISHRLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLN 117 Query: 62925 FALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 F LW RC+ MV SW NS+ + ++ +N+A +W +L Sbjct: 118 FRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDL 157 Score = 51.5 bits (121), Expect = 0.002 Identities = 53/238 (22%), Positives = 90/238 (37%) Frame = +1 Query: 62896 LQVHLQIQLLLPCGNDVMIWSLRGFLIHYQKTLPTTCSMSITQRHFGMNLSDRYDQANGA 63075 L+ L +L C + V W L +++ S R +L+ R++ N Sbjct: 112 LESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWR----DLNSRFNVTNLP 167 Query: 63076 KLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALVVES*RCITLSKT 63255 + Y L EI Q L ++ YYT+++ L ++L + + + C + + +K Sbjct: 168 RTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDSTEALDEPCTCGKAMRLQQKAEQAKI 227 Query: 63256 DASFNSLWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPHGKLNFDSTSLHV 63435 L NE Y IVR I+ LP++ + + IL + + S S V Sbjct: 228 VKFLAGL--NESYAIVRRQIIAKKALPSLGEVYHILDQDNSQQ-----------SFSNVV 274 Query: 63436 NVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFPIGF 63609 A+ + T N+ + VGH ++CYK FP GF Sbjct: 275 APPAAFQVSEITQSPSMDPTVCYVQNGPNKGRPICSFYNRVGHIAERCYKKHGFPPGF 332 Score = 46.5 bits (108), Expect(2) = 1e-006 Identities = 28/80 (35%), Positives = 39/80 (48%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQ 64201 LP G VK++ +G LN + L +LF+ F+ NLIS+ SL + F+ SC +Q Sbjct: 461 LPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQ 520 Query: 64202 GPSMKSPLEIGRAHNGLYFL 64261 L GR LY L Sbjct: 521 DLIKGRMLGQGRRVANLYLL 540 Score = 35.2 bits (79), Expect(2) = 1e-006 Identities = 12/28 (42%), Positives = 23/28 (81%) Frame = +3 Query: 63909 HVLSNNSWIIDSGASNHMTFDKTLLINI 63992 H LS+ +W+IDSGA++H++ D++L ++ Sbjct: 424 HTLSSATWVIDSGATHHVSHDRSLFSSL 451 Score = 34.8 bits (78), Expect(2) = 1e-040 Identities = 22/100 (22%), Positives = 46/100 (46%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L F+++DLG K LG++++ R+ +++ Q Y ++L + KP + P+ + Sbjct: 1158 LDQRFKLRDLGDLKYFLGLEVA--RTTAGISICQRKYALELLQSTGMLACKPVSVPMIPN 1215 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 K+ K+ + + +V + + TRPD Sbjct: 1216 LKMRKDDGDLIEDIEQYRRIV-------GKLMYLTITRPD 1248 Score = 26.2 bits (56), Expect(3) = 5e-050 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 Query: 64529 LWHNRLGHVSFIKMKGIS 64582 +WH RLGH S ++ IS Sbjct: 557 MWHRRLGHASLQRLDAIS 574 >emb|CAB11682.1| (Z98978) retrotransposable element tf2 155 kd protein [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAA93236.1| (Z69240) retrotransposon Tf2p [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAB83007.1| (AL162531) retrotransposble element; tf2 type transposon [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAB57422.1| (AL121764) retrotransposable element tf2 155 kd protein [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAB42363.1| (AL049769) retrotransposable element tf2 155 kd protein [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAB60245.1| (AL023518) TF2 type transposable element [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >gb|AAA91215.1| (L10324) protease, reverse transcriptase, RNAse H, integrase protein [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 533 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 529 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 570 >emb|CAB58169.1| (AL035248) tf2-type transposon [Schizosaccharomyces pombe] Length = 1214 Score = 202 bits (509), Expect(2) = 2e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 455 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 514 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 515 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 574 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 575 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 634 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 635 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 694 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 695 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 744 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 745 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 793 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 794 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 842 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 843 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 901 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 902 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 961 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 962 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1012 Score = 148 bits (370), Expect(2) = 3e-045 Identities = 85/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 294 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 353 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 354 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 413 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 414 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 473 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 474 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 533 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 534 RKFIPKTSQLTHPLNNLLKKDVRWKWT 560 Score = 74.9 bits (181), Expect(3) = 7e-037 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 866 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 924 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 925 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 984 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 985 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1016 Score = 74.1 bits (179), Expect(3) = 7e-037 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 496 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 555 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 556 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 612 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 613 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 672 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 673 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 722 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 723 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 772 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 773 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 824 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 825 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 859 Score = 63.2 bits (151), Expect(2) = 3e-045 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 594 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 653 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 654 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 713 Query: 57655 V 57657 V Sbjct: 714 V 714 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 277 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 336 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 337 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 382 Score = 55.0 bits (130), Expect(3) = 7e-037 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 373 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 432 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 433 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 483 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 757 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 816 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 817 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 859 Score = 23.5 bits (49), Expect(2) = 2e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 410 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 451 >dbj|BAA97287.1| (AB018120) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1491 Score = 154 bits (385), Expect(2) = 1e-040 Identities = 87/214 (40%), Positives = 129/214 (59%), Gaps = 5/214 (2%) Frame = -2 Query: 4821 HSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLN 4642 H + + EP+ F EA++V+ W AM E+ +LE N TW + DLP GK A+ + Sbjct: 969 HKVFLAAITANDEPKHFKEAVKVK---VWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGS 1025 Query: 4641 KWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMH 4477 +WV++ K DG R+KA LVV+G DY E F+PVVK+T++R LL +VA+ Sbjct: 1026 QWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWE 1085 Query: 4476 LEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSF 4297 + QMD FLHGDL++E+YM+ P GF VC+L +SLYGLKQAPR W+KK Sbjct: 1086 VYQMDVHNAFLHGDLEEEVYMKLPPGF-RHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDA 1144 Query: 4296 MTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 + + F + +D + + +L+Y+DD++I G+ Sbjct: 1145 LKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGN 1183 Score = 141 bits (351), Expect(3) = 2e-049 Identities = 69/141 (48%), Positives = 94/141 (65%), Gaps = 1/141 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L V+RALL+Q+ LP ++WGE ++T YLINR +S+ + + + Sbjct: 660 VGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPY 719 Query: 65160 QVLYNK*PAYSYLKVFGCLCFP-TLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++L+ P Y L+VFG C+ + KDKF R+ IF+GYPF G+KV D ST + Sbjct: 720 ELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNE 779 Query: 65337 IHVSRDVSFYENVFPFTLFEVD 65402 VSRDV F ENVFP+ E D Sbjct: 780 FIVSRDVVFRENVFPYATNEGD 801 Score = 136 bits (339), Expect = 5e-029 Identities = 100/359 (27%), Positives = 158/359 (43%), Gaps = 5/359 (1%) Frame = -3 Query: 6092 TLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKG----VIVVARGTNSGTLYTT 5925 +L +V Y+P + +LISV + + +++ ++ G Y T Sbjct: 435 SLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLT 494 Query: 5924 LGCINMDVVAESVSGSCLWHNRLGHMSAKGMKML-VAKGALEGLKSFDMGLCESCVMGKQ 5748 + + LWH RLGH S + L + G+ + S C+ C KQ Sbjct: 495 DAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRS---CDVCFRAKQ 551 Query: 5747 KRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSD 5568 R F + + + H DVWGP V S G+ +++T + DFSR VW Y L S+ Sbjct: 552 TREVFPDSSNKS-TDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSE 610 Query: 5567 VFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGI 5388 V + + A E Q VK +RSDNG E+ +++ +GI + G +QNG Sbjct: 611 VRSVLTNFLAYTEKQFGKSVKIIRSDNGTEF--MCLSSYFKEQGIVHQTSCVGTPQQNGR 668 Query: 5387 DERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELK 5208 ER ++ + +R++ +P FW V T AYLINR PS E+ + Sbjct: 669 VERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPD 728 Query: 5207 YSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTF 5028 Y LR FG Y H ++K ++ C +GY G++ +D + + DV F Sbjct: 729 YDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVF 788 Query: 5027 DESV 5016 E+V Sbjct: 789 RENV 792 Score = 90.1 bits (220), Expect(2) = 1e-029 Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG IS +KKQ++V+ S+AEAEY A ++ ++ W+ + L + G+ + +FCD+ Sbjct: 1358 LGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSK 1417 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 +AI+I N V H+RTKH++ H +RD V G I+ + EQ+ADIFT +L R F Sbjct: 1418 AAISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIY 1477 Query: 87111 NRLELGMMKIN 87079 +LG+ ++ Sbjct: 1478 LMSKLGIQNLH 1488 Score = 74.9 bits (181), Expect(3) = 2e-049 Identities = 38/89 (42%), Positives = 53/89 (58%) Frame = +1 Query: 64657 IFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQ 64836 +FP + S++ F L+ D+W PY V + G YFL IVDDFSRS WT LL KS Sbjct: 555 VFPDSSNKSTD-CFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRS 613 Query: 64837 TIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 + +F++ QF ++K IR+ NG EF+ Sbjct: 614 VLTNFLAYTEKQFGKSVKIIRSDNGTEFM 642 Score = 69.1 bits (166), Expect(2) = 1e-029 Identities = 38/132 (28%), Positives = 69/132 (51%) Frame = -3 Query: 87884 PRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLY 87705 P G ++ Q+KY +++ A+ TP+ L + + K +R ++G LLY Sbjct: 1219 PDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLY 1278 Query: 87704 LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYAD 87525 L +RP++ +SV + ++F P+E+H++A RI+ YLKG+ G+ + L Y D Sbjct: 1279 LLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCD 1338 Query: 87524 VDYVGYLVDRKS 87489 D+ + R+S Sbjct: 1339 SDFQSCPLTRRS 1350 Score = 68.7 bits (165), Expect = 1e-008 Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 3/227 (1%) Frame = -2 Query: 88551 MDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGL 88372 +D+ S HMTG +L ++ S+ S+ V YV L Sbjct: 386 LDTGASHHMTGQLSLLTNIVTIPSCSVGFADDRKTFAISMGTFKLSETVSLSNVLYVPAL 445 Query: 88371 IHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIG---KRDKHIYTVDTSTIYDKKL 88201 +L+S+S+L K+ K + T + + LIG +RD Y D +T K+ Sbjct: 446 NCSLISVSKLV-KQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKV 504 Query: 88200 VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSS 88021 + D LWH+RL H S L+ L L G + + C+ C K + Sbjct: 505 DVTT----DHALWHQRLGHPSFSVLSSL---PLFSG--SSCSVSSRSCDVCFRAKQTREV 555 Query: 88020 FKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 F S+ C LIH D+ GP RV S +Y +VDD++R+ Y+ Sbjct: 556 FPDSSNKSTDC-FSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYL 604 Score = 65.2 bits (156), Expect = 1e-007 Identities = 28/91 (30%), Positives = 48/91 (51%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 S++ G+ I ++ G Y+ W +L + K KTGFING I+ P D+ + WQ + Sbjct: 32 SDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVNS 91 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 M+ W S+ + + ++++A LW EL Sbjct: 92 MIVGWIRASIEPKVKSTVTFISDAHQLWSEL 122 Score = 51.2 bits (120), Expect = 0.002 Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECI-WERXXXXXXXXXXXXVEKGLLGS 515 Y+ W M A+ + K G ++GS K + W+ +E + + Sbjct: 49 YNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKST 108 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 + + + A +W L +RF+ ++ + ++A Q V Y+ + LWE+F++ Sbjct: 109 VTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQDGQPVIDYYGRLCKLWEEFQIY 168 Query: 334 VPTPSCEC---------ERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILL-MIPFPLV 185 P C+C E SKE ++GL++S S L+ M PFP + Sbjct: 169 KPITVCKCGLCTCGATLEPSKE----REEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSL 224 Query: 184 NQAYLMVMSDESK 146 + Y V+ +E + Sbjct: 225 GEIYSRVVREEQR 237 Score = 42.2 bits (97), Expect(2) = 1e-040 Identities = 31/103 (30%), Positives = 46/103 (44%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L F MKDLG K LG+++SR + LSQ Y ++S A+P TPL + Sbjct: 1195 LGRCFSMKDLGKLKYFLGIEVSRGPDG--IFLSQRKYALDIISDSGTLGARPAYTPLEQN 1252 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 L+ + P + + LV L ++ TRP+ Y Sbjct: 1253 HHLASDDGPLLQDPKPFRRLVGRLL-------YLLHTRPELSY 1288 Score = 36.4 bits (82), Expect(2) = 0.010 Identities = 23/88 (26%), Positives = 44/88 (49%), Gaps = 1/88 (1%) Frame = +2 Query: 63998 ITIPFFSY-LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVIS 64174 +TIP S + + +G L+ +++L +L+V + +LISV LV K + Sbjct: 405 VTIPSCSVGFADDRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLAL 464 Query: 64175 FNSFSCLMQGPSMKSPLEIGRAHNGLYFL 64261 F C++Q ++ + G +G+Y+L Sbjct: 465 FTDTICVLQDRFSRTLIGTGEERDGVYYL 493 Score = 31.7 bits (70), Expect(2) = 0.010 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +3 Query: 63933 IIDSGASNHMTFDKTLLINIIPLP 64004 I+D+GAS+HMT +LL NI+ +P Sbjct: 385 ILDTGASHHMTGQLSLLTNIVTIP 408 Score = 30.5 bits (67), Expect(3) = 2e-049 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +2 Query: 64517 STDY-LWHNRLGHVSFIKMKGISSIHISFSPKKHFVCTVCPMDR*TRSYF 64663 +TD+ LWH RLGH SF + + S C VC + TR F Sbjct: 507 TTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVF 556 >gb|AAC67205.1| (AC005171) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1413 Score = 152 bits (379), Expect(2) = 6e-036 Identities = 86/214 (40%), Positives = 128/214 (59%), Gaps = 5/214 (2%) Frame = -2 Query: 4821 HSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLN 4642 H + + EP+ F E ++V+ W AM E+ +LE N TW + DLP GK A+ + Sbjct: 969 HKVFLAAITANDEPKHFKEDVKVK---VWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGS 1025 Query: 4641 KWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMH 4477 +WV++ K DG R+KA LVV+G DY E F+PVVK+T++R LL +VA+ Sbjct: 1026 QWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWE 1085 Query: 4476 LEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSF 4297 + QMD FLHGDL++E+YM+ P GF VC+L +SLYGLKQAPR W+KK Sbjct: 1086 VYQMDVHNAFLHGDLEEEVYMKLPPGF-RHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDA 1144 Query: 4296 MTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGS 4180 + + F + +D + + +L+Y+DD++I G+ Sbjct: 1145 LKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGN 1183 Score = 141 bits (351), Expect(3) = 2e-049 Identities = 69/141 (48%), Positives = 94/141 (65%), Gaps = 1/141 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L V+RALL+Q+ LP ++WGE ++T YLINR +S+ + + + Sbjct: 660 VGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPY 719 Query: 65160 QVLYNK*PAYSYLKVFGCLCFP-TLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++L+ P Y L+VFG C+ + KDKF R+ IF+GYPF G+KV D ST + Sbjct: 720 ELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNE 779 Query: 65337 IHVSRDVSFYENVFPFTLFEVD 65402 VSRDV F ENVFP+ E D Sbjct: 780 FIVSRDVVFRENVFPYATNEGD 801 Score = 136 bits (339), Expect = 5e-029 Identities = 100/359 (27%), Positives = 158/359 (43%), Gaps = 5/359 (1%) Frame = -3 Query: 6092 TLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKG----VIVVARGTNSGTLYTT 5925 +L +V Y+P + +LISV + + +++ ++ G Y T Sbjct: 435 SLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLT 494 Query: 5924 LGCINMDVVAESVSGSCLWHNRLGHMSAKGMKML-VAKGALEGLKSFDMGLCESCVMGKQ 5748 + + LWH RLGH S + L + G+ + S C+ C KQ Sbjct: 495 DAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRS---CDVCFRAKQ 551 Query: 5747 KRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSD 5568 R F + + + H DVWGP V S G+ +++T + DFSR VW Y L S+ Sbjct: 552 TREVFPDSSNKS-TDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSE 610 Query: 5567 VFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGI 5388 V + + A E Q VK +RSDNG E+ +++ +GI + G +QNG Sbjct: 611 VRSVLTNFLAYTEKQFGKSVKIIRSDNGTEF--MCLSSYFKEQGIVHQTSCVGTPQQNGR 668 Query: 5387 DERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELK 5208 ER ++ + +R++ +P FW V T AYLINR PS E+ + Sbjct: 669 VERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPD 728 Query: 5207 YSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTF 5028 Y LR FG Y H ++K ++ C +GY G++ +D + + DV F Sbjct: 729 YDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVF 788 Query: 5027 DESV 5016 E+V Sbjct: 789 RENV 792 Score = 90.1 bits (220), Expect(2) = 1e-019 Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG IS +KKQ++V+ S+AEAEY A ++ ++ W+ + L + G+ + +FCD+ Sbjct: 1280 LGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSK 1339 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 +AI+I N V H+RTKH++ H +RD V G I+ + EQ+ADIFT +L R F Sbjct: 1340 AAISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIY 1399 Query: 87111 NRLELGMMKIN 87079 +LG+ ++ Sbjct: 1400 LMSKLGIQNLH 1410 Score = 74.9 bits (181), Expect(3) = 2e-049 Identities = 38/89 (42%), Positives = 53/89 (58%) Frame = +1 Query: 64657 IFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQ 64836 +FP + S++ F L+ D+W PY V + G YFL IVDDFSRS WT LL KS Sbjct: 555 VFPDSSNKSTD-CFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRS 613 Query: 64837 TIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 + +F++ QF ++K IR+ NG EF+ Sbjct: 614 VLTNFLAYTEKQFGKSVKIIRSDNGTEFM 642 Score = 69.1 bits (166), Expect = 9e-009 Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 3/227 (1%) Frame = -2 Query: 88551 MDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGL 88372 +D+ S HMTG +L ++ S+ S+ V YV L Sbjct: 386 LDTGASHHMTGQLSLLTNIVTIPSCSVGFADGRKTFAISMGTFKLSETVSLSNVLYVPAL 445 Query: 88371 IHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIG---KRDKHIYTVDTSTIYDKKL 88201 +L+S+S+L K+ K + T + + LIG +RD Y D +T K+ Sbjct: 446 NCSLISVSKLV-KQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKV 504 Query: 88200 VCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSS 88021 + D LWH+RL H S L+ L L G + + C+ C K + Sbjct: 505 D----ITTDHALWHQRLGHPSFSVLSSL---PLFSG--SSCSVSSRSCDVCFRAKQTREV 555 Query: 88020 FKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 F S+ C LIH D+ GP RV S +Y +VDD++R+ Y+ Sbjct: 556 FPDSSNKSTDC-FSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYL 604 Score = 63.6 bits (152), Expect = 4e-007 Identities = 28/91 (30%), Positives = 47/91 (50%) Frame = +3 Query: 62772 SESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDD 62951 S++ G+ I ++ G Y+ W +L + K KTGFING I+ P D+ + WQ + Sbjct: 32 SDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVNS 91 Query: 62952 MVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 M+ W S+ + + ++ +A LW EL Sbjct: 92 MIVGWIRASIEPKVKSTVTFICDAHQLWSEL 122 Score = 50.8 bits (119), Expect = 0.003 Identities = 43/182 (23%), Positives = 79/182 (42%), Gaps = 11/182 (6%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECI-WERXXXXXXXXXXXXVEKGLLGS 515 Y+ W M A+ + K G ++GS K + W+ +E + + Sbjct: 49 YNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKST 108 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 + + A +W L +RF+ ++ + ++A Q V Y+ + LWE+F++ Sbjct: 109 VTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQDGQPVIDYYGRLCKLWEEFQIY 168 Query: 334 VPTPSCEC---------ERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILL-MIPFPLV 185 P C+C E SKE ++GL++S S L+ M PFP + Sbjct: 169 KPITVCKCGLCTCGATLEPSKE----REEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSL 224 Query: 184 NQAYLMVMSDESK 146 + Y V+ +E + Sbjct: 225 GEIYSRVVREEQR 237 Score = 39.1 bits (89), Expect(2) = 0.002 Identities = 24/88 (27%), Positives = 45/88 (50%), Gaps = 1/88 (1%) Frame = +2 Query: 63998 ITIPFFSY-LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVIS 64174 +TIP S +G + +G L+ +++L +L+V + +LISV LV K + Sbjct: 405 VTIPSCSVGFADGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLAL 464 Query: 64175 FNSFSCLMQGPSMKSPLEIGRAHNGLYFL 64261 F C++Q ++ + G +G+Y+L Sbjct: 465 FTDTICVLQDRFSRTLIGTGEERDGVYYL 493 Score = 36.0 bits (81), Expect(2) = 1e-019 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -3 Query: 87641 PKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVDYVGYLVDRKS 87489 P+E+H++A RI+ YLKG+ G+ + L Y D D+ + R+S Sbjct: 1222 PREAHLEAAMRIVRYLKGSPGQGILLSANKDLTLEVYCDSDFQSCPLTRRS 1272 Score = 31.7 bits (70), Expect(2) = 0.002 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +3 Query: 63933 IIDSGASNHMTFDKTLLINIIPLP 64004 I+D+GAS+HMT +LL NI+ +P Sbjct: 385 ILDTGASHHMTGQLSLLTNIVTIP 408 Score = 30.5 bits (67), Expect(3) = 2e-049 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +2 Query: 64517 STDY-LWHNRLGHVSFIKMKGISSIHISFSPKKHFVCTVCPMDR*TRSYF 64663 +TD+ LWH RLGH SF + + S C VC + TR F Sbjct: 507 TTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVF 556 Score = 28.6 bits (62), Expect(2) = 6e-036 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSA 4068 L F MKDLG K LG+++SR A Sbjct: 1195 LGRCFSMKDLGKLKYFLGIEVSRGPDA 1221 >emb|CAA27750.1| (X04132) ORF 4 (RNA2) [Drosophila melanogaster] Length = 1237 Score = 156 bits (390), Expect(2) = 2e-049 Identities = 89/275 (32%), Positives = 146/275 (52%), Gaps = 6/275 (2%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKD------ESFRMC 56581 P+ YR +++ E++AQ+Q+L+ + PS + + + +L V KK + +R+ Sbjct: 314 PVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLV 373 Query: 56582 IEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TR 56761 I+YRQ+NK L +K+ +P IDD D + A FS +DL SG+ Q+++ + T+F T Sbjct: 374 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 433 Query: 56762 CGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXX 56941 G Y F FGLK AP +F +M F +++DD+++ S K Sbjct: 434 NGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEV 493 Query: 56942 XXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSF 57121 NL KC F + V+FLGH + G++ D K + ++ + P + F Sbjct: 494 FGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRF 553 Query: 57122 VGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESF 57244 V +YYRRFI F+ + +T L K+NVPF W+ EC+++F Sbjct: 554 VAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAF 594 Score = 102 bits (252), Expect(2) = 2e-020 Identities = 71/230 (30%), Positives = 111/230 (47%), Gaps = 7/230 (3%) Frame = -1 Query: 39283 RDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTEVHSFVGLV 39104 R+ L KC F++ V F GH + +GI D K + I + P FV Sbjct: 498 REYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFC 557 Query: 39103 SYYRRFVEGFSTSATHLNL---QDVSFMWLVKCDMSFLKLKELITSAPILTLLVEGGGFT 38933 +YYRRF++ F+ + H+ ++V F W +C +F+ LK + + +L F Sbjct: 558 NYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFC 617 Query: 38932 IYCDASGVGVDFVLMKQG----WFIDYVSRELKVHELNYPTRDLELAVIVFALMIWRHYL 38765 I DAS VL + + Y SR E N T + ELA I +A++ +R Y+ Sbjct: 618 ITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYI 677 Query: 38764 YGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVAYSLSR 38594 YG + TDH L + + +S+ R L++Y+ ++ Y GK N VA +LSR Sbjct: 678 YGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSR 734 Score = 73.4 bits (177), Expect = 5e-010 Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 11/200 (5%) Frame = +2 Query: 68390 IMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L----- 68554 I+ D KK + I+++ P F+ YYRR + ++ + Sbjct: 528 ILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWT 587 Query: 68555 -SCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK----VVA 68719 C + L KS +N LL++ + + + DAS+ G VL Q VA Sbjct: 588 DECQKAFIHL--KSQLINPTLLQYPDFS--KEFCITTDASKQACGAVLTQNHNGHQLPVA 643 Query: 68720 YASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLR 68899 YASR E + EL + +A+ + Y+YG HF V T+HR L Y+F+ + + Sbjct: 644 YASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSK 703 Query: 68900 -KRIWLELLKDYDMTILYHPGKTNVVADALS 68989 RI LE L++Y+ T+ Y GK N VADALS Sbjct: 704 LTRIRLE-LEEYNFTVEYLKGKDNHVADALS 733 Score = 69.5 bits (167), Expect(2) = 2e-049 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERN----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + D S GAVL N + YASR E N T + +LAA+ +A+ +R Sbjct: 616 FCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRP 675 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 Y+YG V TDHR L Y+F+ + + + R L++ + T+ Y GK N VADALSR Sbjct: 676 YIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSR 734 Score = 62.1 bits (148), Expect(2) = 2e-018 Identities = 32/112 (28%), Positives = 66/112 (58%), Gaps = 6/112 (5%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 + SE++++F + + ++ + + +P++ YR ++++E++ Q+Q L+ Sbjct: 282 ICSEYIDIFALESEPITVNNLYKQQLRLK-DDEPVYTKNYRSPHSQVEEIQAQVQKLIKD 340 Query: 67874 VFIRTSVSSWGAPLLFVKRKD------EYMHMCIDYRQLNKITIIN*YPIPRIDDLFD 68029 + SVS + +PLL V +K + + IDYRQ+NK + + +P+PRIDD+ D Sbjct: 341 KIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILD 398 Score = 59.3 bits (141), Expect(2) = 2e-018 Identities = 58/195 (29%), Positives = 87/195 (43%), Gaps = 11/195 (5%) Frame = +1 Query: 68050 FSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 FS +DL S +HQ++L E T+F T G Y F + F L A +F +M AF Sbjct: 406 FSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIE 465 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWL-SVQRRYHGGSE 68406 C ++ +L VFG +E L KC ++ V H ++ Sbjct: 466 PSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTD 525 Query: 68407 KD--*DN*RLD*TCFSY-------SDLKFLRPCRLLST-IYDFLSIASTLTRLT*KEVTF 68556 K D+ + D +Y S +F+ C I +F + +TRL K V F Sbjct: 526 KGILPDDKKYD-VIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPF 584 Query: 68557 LWSDECEVSFQKLKT*LTTARILTLP 68634 W+DEC+ +F LK+ L +L P Sbjct: 585 EWTDECQKAFIHLKSQLINPTLLQYP 610 Score = 52.7 bits (124), Expect = 8e-004 Identities = 39/171 (22%), Positives = 76/171 (43%), Gaps = 1/171 (0%) Frame = -1 Query: 38245 HLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVK-VEHLRSGGAFKRLSISEWKWD 38069 H G K +++HY W M I ++V +C Q+ K +H ++ E +D Sbjct: 909 HTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKT--PMTITETPEHAFD 966 Query: 38068 RITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVRLARIYIWEVVRFHGVP 37889 R+ +D + LP++ G + ++ LTK +P+ + S +A+ + +G Sbjct: 967 RVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANK-SAKTVAKAIFESFILKYGPM 1025 Query: 37888 VSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDML 37733 + I+D G+++ + T L + S A H QT E + + L + + Sbjct: 1026 KTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYI 1077 Score = 47.3 bits (110), Expect(2) = 6e-005 Identities = 34/159 (21%), Positives = 68/159 (42%) Frame = +1 Query: 69496 PEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIV 69675 PE + + VD + L ++ + ++ LTK +P+ + K +AK + Sbjct: 961 PEHAFDRVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANK-SAKTVAKAIFESFI 1019 Query: 69676 RLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*A 69855 +G + I+D GT++ + + K L + ST H QT E + L + + + Sbjct: 1020 LKYGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRS 1079 Query: 69856 CVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGR 69972 + WD +L + +N + + P+E ++GR Sbjct: 1080 YISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGR 1118 Score = 28.6 bits (62), Expect(2) = 6e-005 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +2 Query: 69344 GLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVK 69451 G+ +K+HY M + I ++V +C CQ+ K Sbjct: 911 GITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAK 946 Score = 25.8 bits (55), Expect(2) = 2e-020 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -3 Query: 39446 FRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILVI 39339 F AP++F +MT F S ++MDD++VI Sbjct: 444 FGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVI 479 >gb|AAD23883.1|AC006954_4 (AC006954) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1156 Score = 156 bits (390), Expect(2) = 8e-041 Identities = 92/214 (42%), Positives = 131/214 (60%), Gaps = 7/214 (3%) Frame = -2 Query: 4821 HSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLN 4642 H + EP+ F EA++++ W AM E+ +LE N TW + DLP GK A+ + Sbjct: 626 HKAFLAAITANDEPKHFKEAVRIK---VWNDAMFKEVDALEINKTWDIVDLPPGKVAIGS 682 Query: 4641 KWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMH 4477 +WV++ K DG R+KA LVV+G DY E F+PVVK+T++R LL +VA+ Sbjct: 683 QWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWE 742 Query: 4476 LEQMDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSF 4297 + QMD FLHGDLD+E+YM+ P GF VC+L +SLYGLKQAPR W+KK Sbjct: 743 VYQMDVNNAFLHGDLDEEVYMKLPPGF-RHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDA 801 Query: 4296 MTKSEFCKAEKDPCCYFKKYTNSYVFL--LLYLDDMLIEGS 4180 + + F + +D F YT + + L L+Y+DD+LI G+ Sbjct: 802 LLRFGFVQGHED--YSFFSYTRNGIELRVLVYVDDLLICGN 840 Score = 142 bits (355), Expect = 6e-031 Identities = 95/294 (32%), Positives = 136/294 (45%), Gaps = 3/294 (1%) Frame = -3 Query: 5897 AESVSGSCLWHNRLGHMS---AKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTK 5727 A+ S LWH RLGH S + +L + G +S C+ C KQ R F Sbjct: 82 AKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRS-----CDVCFRAKQTREVFPV 136 Query: 5726 TPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKK 5547 + + + + H DVWGP V S G+ +++T + DFSR VW Y L S+V Sbjct: 137 STNKSIECF-SLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRAVWTYLLLAKSEVRTVLTN 195 Query: 5546 WKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKI 5367 + E Q VK LRSDNG E+ ++ GI + G +QNG ER ++ Sbjct: 196 FLVYTEKQFGKSVKVLRSDNGTEF--MCLASYFREHGIVHQTSCVGTPQQNGRVERKHRH 253 Query: 5366 LNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTF 5187 + AR++ +P FW V T AYLINR P+ E+ + Y HLR F Sbjct: 254 ILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPYEILHNSKPNYEHLRVF 313 Query: 5186 GCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV 5016 G YVH ++K ++ C IGY G++ +D + ++ L DV F E V Sbjct: 314 GSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLVSRDVVFREDV 370 Score = 141 bits (352), Expect(3) = 3e-049 Identities = 72/163 (44%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VARA+L+Q+ LP ++WGE +LT YLINR S+ + + + Sbjct: 238 VGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPY 297 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++L+N P Y +L+VFG C+ S KDKF R+ +F+GYPF G+KV D K+ Sbjct: 298 EILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKE 357 Query: 65337 IHVSRDVSFYENVFPFTLFEVDFSFSTTLEKLSINQNILHSTNS 65468 VSRDV F E+VFP+ D S + L ++++ + ST + Sbjct: 358 FLVSRDVVFREDVFPYAATNTD-HVSASPAPLLVDEDWMVSTTT 400 Score = 74.1 bits (179), Expect(3) = 3e-049 Identities = 37/89 (41%), Positives = 52/89 (57%) Frame = +1 Query: 64657 IFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQ 64836 +FP+ +T S F L+ D+W PY V + G YFL IVDDFSR+ WT LL KS Sbjct: 133 VFPV-STNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRAVWTYLLLAKSEVRT 191 Query: 64837 TIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 + +F+ QF ++K +R+ NG EF+ Sbjct: 192 VLTNFLVYTEKQFGKSVKVLRSDNGTEFM 220 Score = 67.5 bits (162), Expect(2) = 7e-021 Identities = 42/130 (32%), Positives = 67/130 (51%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LG IS +KKQ++V+ S+AEAEY A ++ ++ W+++ L + Sbjct: 1015 LGGSPISWKTKKQDTVSHSSAEAEYRAMSVALREIKWLRKLLKELA-------------- 1060 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 N V H+RTKH++ H +RD V G I+ + EQ+ADIFT +L R F Sbjct: 1061 ------NPVFHERTKHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYL 1114 Query: 87108 RLELGMMKIN 87079 +LG+ ++ Sbjct: 1115 MSKLGIQDLH 1124 Score = 62.5 bits (149), Expect(2) = 7e-021 Identities = 34/121 (28%), Positives = 62/121 (51%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G ++ Q+KY +++ + TP+ L + + K YR ++G LLYL Sbjct: 878 GIFLSQRKYALDIITDSGNLGCRPALTPLEQNHHLATDDGPLLADAKPYRRLVGRLLYLL 937 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RP++ +SV + ++F P+E+H+ A RI+ +LKG+ G+ + L Y D D Sbjct: 938 HTRPELSYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPGQGILLNADTELQLDVYCDSD 997 Query: 87518 Y 87516 + Sbjct: 998 F 998 Score = 50.4 bits (118), Expect = 0.004 Identities = 38/129 (29%), Positives = 56/129 (42%), Gaps = 3/129 (2%) Frame = -2 Query: 88257 KRDKHIYTVDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKL---ITKDLVIGLP 88087 +RD Y D +T + + + D LWH+RL H S L+ L + L +G Sbjct: 64 ERDGVYYLTDVATAK----IHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVG-- 117 Query: 88086 KNKFKEDKVCEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVL 87907 + C+ C K + F S C LIH D+ GP RV S +Y + Sbjct: 118 ------SRSCDVCFRAKQTREVFPVSTNKSIEC-FSLIHCDVWGPYRVPSSCGAVYFLTI 170 Query: 87906 VDDYTRNT*RYM 87871 VDD++R Y+ Sbjct: 171 VDDFSRAVWTYL 182 Score = 40.6 bits (93), Expect(2) = 8e-041 Identities = 29/103 (28%), Positives = 46/103 (44%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L F MKDLG K LG+++SR + LSQ Y +++ +P TPL + Sbjct: 852 LGRCFSMKDLGKLKYFLGIEVSRGSEG--IFLSQRKYALDIITDSGNLGCRPALTPLEQN 909 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 L+ + P + + + LV L ++ TRP+ Y Sbjct: 910 HHLATDDGPLLADAKPYRRLVGRLL-------YLLHTRPELSY 945 Score = 30.5 bits (67), Expect(3) = 3e-049 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVSFIKMKGISSIHISFSPKKHFVCTVCPMDR*TRSYF 64663 +S LWH RLGH SF + + + S C VC + TR F Sbjct: 85 SSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCDVCFRAKQTREVF 134 >gb|AAG13430.1|AC051634_11 (AC051634) putative plant disease resistance polyprotein; 68876-72133 [Oryza sativa] Length = 921 Score = 166 bits (417), Expect(2) = 3e-049 Identities = 134/466 (28%), Positives = 213/466 (44%), Gaps = 3/466 (0%) Frame = -1 Query: 39010 MSFLKLKELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSRELKVHELN 38831 ++F +LK +++ P+L L FT+ DA G+ VL +QG I Y S+ L Sbjct: 270 LAFDQLKTAMSNTPVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQK 329 Query: 38830 YPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSL---QDIMIQRDLNSR*CRWIELLK 38660 + E I+ + WR YL + TDH SL D ++ +L + + L Sbjct: 330 LSIYEKEFLAIMMVVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQK---AMTKLM 386 Query: 38659 DYDLSILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSR 38480 S Y G N+VA +LSR PS QF A +V+ I+ Sbjct: 387 GLQYSFQYKRGVDNIVADALSRM-------PS----------SSQFCALSVVQ-PIWIQE 428 Query: 38479 CVLAYMGVQSSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTV 38300 + +Y + A L + + Q G+++F +I + + Sbjct: 429 VINSYT--------------VDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSN 474 Query: 38299 GDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHL 38120 ++ H H G A Y +++ + W G++ D+ +FV +C QQ K EH Sbjct: 475 AGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHC 534 Query: 38119 RSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVV 37940 R G L I + W I+MDF+ GLP+ S G ++I V+VD+ TK A+F+P+ F+ Sbjct: 535 RLPGLLAPLPIPKEAWQDISMDFIEGLPR-SDGYNAILVVVDRFTKYANFIPLCHPFTAS 593 Query: 37939 RLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEH 37760 ++A + V + HG+P SI+SDR FTS F TT T++ +S A+HPQ D Q+E Sbjct: 594 QVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQIDGQTER 653 Query: 37759 TIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYG 37613 Q LE L + + LA+F YN+ +H+++ AL+G Sbjct: 654 VNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALFG 702 Score = 102 bits (252), Expect(2) = 4e-024 Identities = 54/159 (33%), Positives = 90/159 (55%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 IP+ + I++D + L R+ G ++ I V+V+R TK A+F+P+ + ++A + + + Sbjct: 545 IPKEAWQDISMDFIEGLPRSDG-YNAILVVVDRFTKYANFIPLCHPFTASQVAHLVDKTV 603 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 + HG+ SI+SDR F S FW ++ T++ +ST +HPQ D Q+E + Q LE L Sbjct: 604 FKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQIDGQTERVNQCLEMYLR 663 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYG 69969 W ++ L EF YN +YH S +P +AL+G Sbjct: 664 CMTQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALFG 702 Score = 58.6 bits (139), Expect(2) = 3e-049 Identities = 38/101 (37%), Positives = 55/101 (53%), Gaps = 1/101 (0%) Frame = -3 Query: 37523 ESIQDRLRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGR-WGKLSPRYIGP 37347 E +Q +L Q R ++ AD R F+V D +FL + P R + KL+ ++ GP Sbjct: 733 EFLQQQLTRAQLRMKNKADKGRSDRVFAVGDAVFLKLQPYAQSSVVNRPYPKLAYKFFGP 792 Query: 37346 FEILRIAGEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHV 37221 F +L G AY LDLP + S +HPVF VS + +PD + V Sbjct: 793 FTVLERIGVAAYRLDLPAS-STVHPVFHVSQLKAQVPDHTPV 833 Score = 58.2 bits (138), Expect = 2e-005 Identities = 31/85 (36%), Positives = 47/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 57900 EGILMIKERVCVPRVDDLIHTILAEA-HSSRYSIHPGATKMYHDLKQHFLWSRMQHDIVD 58076 +GI+ + ++ + L HT L +A H+S H G YH +K+ F W ++ D+ + Sbjct: 460 QGIIRFQNKIWIGSNAGL-HTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVEN 518 Query: 58077 FVAQCPNCQQVKYEHQRPGGTLKRMP 58154 FV QC CQQ K+EH R G L +P Sbjct: 519 FVKQCQVCQQAKHEHCRLPGLLAPLP 544 Score = 56.2 bits (133), Expect = 7e-005 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Frame = +2 Query: 68654 LYIDASQIGLGCVLMQKGKVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVH 68833 L DA GLG VL Q+G +AY S+ L +K I++ E + ++ + W YL Sbjct: 296 LETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMMVVDKWRCYLQRGP 355 Query: 68834 FAVFTNHRSLQYIFNQ-RDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 F + T+H+SL ++ ++ +L+++ +L+ + Y G N+VADALS Sbjct: 356 FIIKTDHKSLCHLDDEILGTELQQKAMTKLM-GLQYSFQYKRGVDNIVADALS 407 Score = 50.4 bits (118), Expect = 0.004 Identities = 38/128 (29%), Positives = 59/128 (45%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 F + D GLGAVL + + I Y S+ L ++ + A++ + +WR YL Sbjct: 294 FTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMMVVDKWRCYLQR 353 Query: 57487 VKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRKVGSM 57666 + TDH+SL ++ + +++ M L + Y G N+VADALSR S Sbjct: 354 GPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADALSRMPSSS 413 Query: 57667 GSLAHSQV 57690 A S V Sbjct: 414 QFCALSVV 421 Score = 38.3 bits (87), Expect(2) = 4e-024 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +2 Query: 69344 GLLNIYLDLKQHYLCCRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 G+ Y +K+ + +K D+ +FV +C CQQ KHEH + G+ +P Sbjct: 495 GIAATYHQIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLP 544 >gb|AAB87099.1| (AC002391) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1496 Score = 167 bits (419), Expect(2) = 2e-044 Identities = 90/226 (39%), Positives = 141/226 (61%), Gaps = 7/226 (3%) Frame = -2 Query: 4824 SHSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALL 4645 +H ++D EP+ F +A+ +++ W AM E+ +LE N TW +TDLP GK+A+ Sbjct: 973 NHIAFMAAILDSNEPKHFKDAILIKE---WCEAMSKEIDALEANHTWDITDLPHGKKAIS 1029 Query: 4644 NKWVFRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENM 4480 +KWV+++K DG R KA LVV G D+ E F+PV KLT++R +L + A+++ Sbjct: 1030 SKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDW 1089 Query: 4479 HLEQMDEKTVFLHGDLDKEIYMQQPKGFVV--PGKEHMVCKLTRSLYGLKQAPRQWYKKF 4306 + QMD FLHGDL++E+YM+ P GF P K VC+L +SLYGLKQAPR W+ K Sbjct: 1090 EVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSK---VCRLRKSLYGLKQAPRCWFSKL 1146 Query: 4305 DSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKV 4147 + + F ++ +D + K ++ + +L+Y+DD+++ G NNLD + Sbjct: 1147 STALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAG------NNLDAI 1193 Score = 151 bits (378), Expect = 1e-033 Identities = 110/369 (29%), Positives = 166/369 (44%), Gaps = 8/369 (2%) Frame = -3 Query: 6122 CIKTTLRNQRTLDDVRYIPGIKKNLISVGQF-DSTGYAAVFGKGSWKIVKGVI--VVARG 5952 C L + L DV ++P LISV + T A+F + + ++ G Sbjct: 412 CGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTLIGAG 471 Query: 5951 TNSGTLYTTLGCINMDVVAES----VSGSCLWHNRLGHMSAKGMKMLV-AKGALEGLKSF 5787 +Y G + V S +SG LWH RLGH S + L + +G Sbjct: 472 EEREGVYYFTGVLAPRVHKASSDFAISGD-LWHRRLGHPSTSVLLSLPECNRSSQGFDKI 530 Query: 5786 DMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFS 5607 D C++C KQ R F + + + + H DVWGP S G+ +++T + D+S Sbjct: 531 DS--CDTCFRSKQTREVFPISNNKTMECF-SLIHGDVWGPYRTPSTTGAVYFLTLVDDYS 587 Query: 5606 RKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRL 5427 R VW Y + ++V K + A E Q +VK R+DNG E+ T + GI Sbjct: 588 RSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEF--MCLTPYFQTHGILH 645 Query: 5426 MRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGF 5247 + +QNG ER ++ + AR+ +P FW + T +LINR PS L Sbjct: 646 QTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKG 705 Query: 5246 KILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDD 5067 K E+ + Y LR+FGC Y H+ P ++K ++ KC IGY +R +D Sbjct: 706 KTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDL 765 Query: 5066 KNRKILRHCDVTFDESV 5016 + KI DV F E + Sbjct: 766 ETGKIFASRDVRFHEDI 782 Score = 144 bits (359), Expect(3) = 3e-049 Identities = 65/135 (48%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VARA L+Q LP ++WGE ILT T+LINR ++VL K + Sbjct: 650 VDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPY 709 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 ++L+ + P+Y L+ FGCLC+ + +KDKF R+ +F+GYP ++V D T K Sbjct: 710 ELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGK 769 Query: 65337 IHVSRDVSFYENVFPF 65384 I SRDV F+E+++P+ Sbjct: 770 IFASRDVRFHEDIYPY 785 Score = 87.0 bits (212), Expect(2) = 6e-028 Identities = 51/127 (40%), Positives = 75/127 (58%), Gaps = 1/127 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDN 87295 +LG IS +KKQ++V+ S+AEAEY A A ++ W+K L D G+ + + CD+ Sbjct: 1362 YLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDS 1421 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 +AI+I N V H+RTKH++ H +RD V I+ E+Q+AD+ T SL R FE Sbjct: 1422 EAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFE 1481 Query: 87114 RNRLELGM 87091 R LG+ Sbjct: 1482 RLLSTLGV 1489 Score = 76.5 bits (185), Expect(3) = 3e-049 Identities = 37/89 (41%), Positives = 53/89 (58%) Frame = +1 Query: 64657 IFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQ 64836 +FPI N + F L+ D+W PY + G YFL +VDD+SRS WT L++ K+ Q Sbjct: 545 VFPISNNKTME-CFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSSKTEVSQ 603 Query: 64837 TIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 IK+F ++ QF +K+ RT NG EF+ Sbjct: 604 LIKNFCAMSERQFGKQVKAFRTDNGTEFM 632 Score = 66.7 bits (160), Expect(2) = 6e-028 Identities = 39/132 (29%), Positives = 67/132 (50%) Frame = -3 Query: 87884 PRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLY 87705 P G + Q+KY +++K + K PIA KL + YR ++G +Y Sbjct: 1224 PDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIY 1283 Query: 87704 LTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYAD 87525 LT +RPD+ ++V + ++F P +H +A R++ YLKG+ G++ S+ + Y D Sbjct: 1284 LTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCD 1343 Query: 87524 VDYVGYLVDRKS 87489 DY + R+S Sbjct: 1344 SDYNACPLTRRS 1355 Score = 60.5 bits (144), Expect = 4e-006 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 6/230 (2%) Frame = -2 Query: 88551 MDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGL 88372 +D+ S HMTG+ ++ + + + D + + V +V Sbjct: 373 IDTGASHHMTGDCSILVDVFDITPSPVTKPDGKASQATKCGTLLLHDSYKLHDVLFVPDF 432 Query: 88371 IHNLLSISQLCDKENKV-IFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLVC 88195 L+S+S+L + + + IF T + + + L+ G+ + +Y T + + Sbjct: 433 DCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTLIGAGEEREGVYYF-TGVLAPRVHKA 491 Query: 88194 LSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPK-NKFKE--DKV--CEACTLGK*I 88030 S LWH+RL H S +++ LP+ N+ + DK+ C+ C K Sbjct: 492 SSDFAISGDLWHRRLGHPST---------SVLLSLPECNRSSQGFDKIDSCDTCFRSKQT 542 Query: 88029 KSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYMDSS 87862 + F + C LIH D+ GP R S +Y LVDDY+R+ Y+ SS Sbjct: 543 REVFPISNNKTMEC-FSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSS 597 Score = 58.6 bits (139), Expect(2) = 3e-006 Identities = 42/180 (23%), Positives = 74/180 (40%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECIWERXXXXXXXXXXXXVEKGLLGSI 512 Y+ W ++ + + K+G +DGS PK +W ++ + ++ Sbjct: 44 YAEWSEELQNFLRAKQKLGFIDGSIPKPAADPELSLWIAINSMIVGWIRTSIDPTIRSTV 103 Query: 511 MYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVVV 332 + + A +W NL RF+ + L EIA TQ V Y+ + LWE+ + Sbjct: 104 GFVSEASQLWENLRRRFSVGNGVRKTLLKDEIAACTQDGQPVLAYYGRLIKLWEELQNYK 163 Query: 331 PTPSCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMSDE 152 C+CE + + L+GL+ + RS I + P P + Q Y V+ +E Sbjct: 164 SGRECKCEAASDIEKEREDDRVHKFLLGLDSRFSSIRSSITDIEPLPDLYQVYSRVVREE 223 Score = 54.7 bits (129), Expect(2) = 6e-014 Identities = 27/100 (27%), Positives = 46/100 (46%) Frame = +3 Query: 62745 SNNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAA 62924 S A+ ++ S++ G+ I +V Y W + K K GFI+G I P+ D Sbjct: 18 STTAYLINASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFIDGSIPKPAADPE- 76 Query: 62925 FALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 +LW + M+ W S+ + + +V+ A LW+ L Sbjct: 77 LSLWIAINSMIVGWIRTSIDPTIRSTVGFVSEASQLWENL 116 Score = 51.9 bits (122), Expect(2) = 6e-014 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 2/187 (1%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 NL R+ NG + LL EI TQD V +YY ++ KL EEL + + Sbjct: 115 NLRRRFSVGNGVRKTLLKDEIAACTQDGQPVLAYYGRLIKLWEELQNYKSGRE-----CK 169 Query: 63220 VES*RCITLSKTDASFNS--LWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVK 63393 E+ I + D + L L+ + +R SI + PLP + Q +S + EE+ Sbjct: 170 CEAASDIEKEREDDRVHKFLLGLDSRFSSIRSSITDIEPLPDLYQVYSRVVREEQNLNAS 229 Query: 63394 PHGKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKD 63573 K + ++ +V +S++ FR ++S +F +C GH Sbjct: 230 -RTKDVVKTEAIGFSVQSSTTPRFR-----------------DKSTLFCTHCNRKGHEVT 271 Query: 63574 KCYKLSWFP 63600 +C+ + +P Sbjct: 272 QCFLVHGYP 280 Score = 45.7 bits (106), Expect(2) = 2e-004 Identities = 23/78 (29%), Positives = 37/78 (46%) Frame = +2 Query: 64025 PNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQG 64204 P+G + T+ G L+ S LH +LFV F LISV L+ + F C +Q Sbjct: 402 PDGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQD 461 Query: 64205 PSMKSPLEIGRAHNGLYF 64258 +++ + G G+Y+ Sbjct: 462 RFLRTLIGAGEEREGVYY 479 Score = 41.4 bits (95), Expect(2) = 2e-044 Identities = 30/105 (28%), Positives = 44/105 (41%) Frame = -3 Query: 4154 TRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLA 3975 ++L F MKDLG K LG+++SR LSQ Y ++ + KP P+A Sbjct: 1198 SQLHKCFHMKDLGKLKYFLGLEVSRGPDG--FCLSQRKYALDIVKETGLLGCKPSAVPIA 1255 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 + KL+ P + LV + + TRPD Y Sbjct: 1256 LNHKLASITGPVFTNPEQYRRLVGRFI-------YLTITRPDLSY 1293 Score = 28.6 bits (62), Expect(2) = 2e-004 Identities = 10/23 (43%), Positives = 19/23 (82%) Frame = +3 Query: 63933 IIDSGASNHMTFDKTLLINIIPL 64001 +ID+GAS+HMT D ++L+++ + Sbjct: 372 VIDTGASHHMTGDCSILVDVFDI 394 Score = 25.1 bits (53), Expect(3) = 3e-049 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = +2 Query: 64478 FYNPLMSCMSHGNSTDY-----LWHNRLGHVSFIKMKGISSIHISFSP-KKHFVCTVCPM 64639 ++ +++ H S+D+ LWH RLGH S + + + S K C C Sbjct: 479 YFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPECNRSSQGFDKIDSCDTCFR 538 Query: 64640 DR*TRSYF 64663 + TR F Sbjct: 539 SKQTREVF 546 Score = 21.9 bits (45), Expect(2) = 3e-006 Identities = 8/35 (22%), Positives = 16/35 (44%) Frame = -3 Query: 113 SNPDSVQQAYKLAMYLRNDGTKRFKKSGNLYCDYC 9 S V + + +++ T RF+ L+C +C Sbjct: 229 SRTKDVVKTEAIGFSVQSSTTPRFRDKSTLFCTHC 263 >emb|CAB61532.1| (AL021815) retrotransposable element; tf2-type transposon [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 5e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 145 bits (363), Expect(2) = 2e-044 Identities = 84/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++D+ILI+SKS Sbjct: 533 VMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 1e-036 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 1e-036 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 2e-044 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 54.3 bits (128), Expect(3) = 1e-036 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 21.9 bits (45), Expect(2) = 5e-049 Identities = 12/45 (26%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MD+IL+ Sbjct: 529 FEYLVMPYGI---SIAPAHFQYFINTILGEVKESHVVCYMDNILI 570 >emb|CAB64236.1| (AL035675) retrotransposable element; tf2-type transposon [Schizosaccharomyces pombe] Length = 1333 Score = 202 bits (509), Expect(2) = 5e-049 Identities = 163/568 (28%), Positives = 265/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 574 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 633 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 634 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCL 693 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 694 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 753 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 754 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 813 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 814 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 863 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 864 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 912 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 913 -----------RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ 961 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + + SE W+ ++MDF+ LP++S G ++++V+VD+ +K A +P Sbjct: 962 INKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPC 1020 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1021 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1080 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1081 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1131 Score = 145 bits (363), Expect(2) = 2e-044 Identities = 84/267 (31%), Positives = 137/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 413 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 472 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 473 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 532 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++D+ILI+SKS Sbjct: 533 VMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNA 592 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 593 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L NL K++V + W+ Sbjct: 653 RKFIPKTSQLTHPLNNLLKKDVRWKWT 679 Score = 74.9 bits (181), Expect(3) = 1e-036 Identities = 41/152 (26%), Positives = 77/152 (49%) Frame = +1 Query: 69511 ECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIVRLHGV 69690 E +++D + L + G ++ ++V+V+R +K A VP + ++ A+++ + ++ G Sbjct: 985 ESLSMDFITALPESSG-YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1043 Query: 69691 SISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDF 69870 II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1044 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1103 Query: 69871 GNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1104 PNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135 Score = 74.1 bits (179), Expect(3) = 1e-036 Identities = 89/373 (23%), Positives = 161/373 (42%), Gaps = 22/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDV 674 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 675 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 731 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 841 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 842 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 891 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV--------*VTLFIQGLLNIYLDLKQHYLC 69388 ++ K I +P D R+I+ + I+ L NI L + + Sbjct: 892 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNIIL---RRFTW 943 Query: 69389 CRMKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 +++ I ++V C CQ K + KP G IP Sbjct: 944 KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 63.2 bits (151), Expect(2) = 2e-044 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 713 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 772 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 773 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832 Query: 57655 V 57657 V Sbjct: 833 V 833 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 501 Score = 54.3 bits (128), Expect(3) = 1e-036 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 492 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINT 551 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 552 ILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602 Score = 51.5 bits (121), Expect = 0.002 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 876 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L+ +P Sbjct: 936 IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIP 978 Score = 21.9 bits (45), Expect(2) = 5e-049 Identities = 12/45 (26%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MD+IL+ Sbjct: 529 FEYLVMPYGI---SIAPAHFQYFINTILGEVKESHVVCYMDNILI 570 >gb|AAA35339.1| (M38526) Tf1 protein [Schizosaccharomyces pombe] Length = 1330 Score = 200 bits (504), Expect(2) = 6e-049 Identities = 163/568 (28%), Positives = 262/568 (45%), Gaps = 24/568 (4%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S SEH +++ VLQ L++ L +KCEF V F G+ +S++G I+ + W Sbjct: 571 SESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQW 630 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSATHLN---LQDVSFMWLVKCDMSFLKLKELI 38981 +P + E+ F+G V+Y R+F+ S LN +DV + W + +K+ + Sbjct: 631 KQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNKLLKKDVRWKWTPTQTQAIENIKQCL 690 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYPTRD 38816 S P+L + DAS V V VL ++ + + Y S ++ +LNY D Sbjct: 691 VSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSD 750 Query: 38815 LELAVIVFALMIWRHYLYGV--QYETYTDHMSLQDIMIQRD--LNSR*CRWIELLKDYDL 38648 E+ I+ +L WRHYL ++ TDH +L + N R RW L+D++ Sbjct: 751 KEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNF 810 Query: 38647 SILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSA----NCMVRLDIFYSR 38480 I Y PG N +A +LSR V P+ D + ++ N + D F ++ Sbjct: 811 EINYRPGSANHIADALSR----------IVDETEPIPKDSEDNSINFVNQISITDDFKNQ 860 Query: 38479 CVLAYMGVQSSLYDRN-------RGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSG 38321 V Y L N Q +D L++ +DQ+L + Q T Sbjct: 861 VVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT----------- 909 Query: 38320 RISVPTVGDSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQ 38141 + I+ + HE IH G + + + + W G+R I ++V C Q Sbjct: 910 -----------RTIIKKYHEEGKLIHPGIELLTNTILRRFTWKGLRKQIQEYVQNCHTCQ 958 Query: 38140 QVKVEHLRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPV 37961 K + + G + E W+ ++MDF+ LP++S G +++ V+VD+ +K A LP Sbjct: 959 INKSRNHKPYGPLHPIPPPERPWESLSMDFITALPESS-GYNALLVVVDRFSKMAILLPC 1017 Query: 37960 QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQ 37781 + + AR++ V+ + G P II+D FTS F + + S + PQ Sbjct: 1018 TKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ 1077 Query: 37780 TDDQSEHTIQVLEDMLH-VCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLF 37628 TD Q+E T Q +E +L VC D S L Q +YN+ HS QM F Sbjct: 1078 TDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS-LVQQSYNNAIHSATQMTPF 1128 Score = 146 bits (364), Expect(2) = 2e-044 Identities = 84/267 (31%), Positives = 136/267 (50%) Frame = +2 Query: 56423 ISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQLN 56602 + I Y + P +++ + ++ + L G IR S A V+FV KK+ + RM ++Y+ LN Sbjct: 410 LPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLN 469 Query: 56603 KVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEFL 56782 K N Y +P I+ +QG+ +F+K+DL S Y +++ + K AF G +E+L Sbjct: 470 KYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYL 529 Query: 56783 VKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXXK 56962 V +G+ APA F +N I E V+ ++DDILI+SKS Sbjct: 530 VMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNA 589 Query: 56963 NLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYY 57142 NL KCEF + V F+G+ +S+ G I+ V W +P N ++ F+G +Y Sbjct: 590 NLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 649 Query: 57143 RRFI*VFSSIALQLTNLTKQNVPFIWS 57223 R+FI S + L L K++V + W+ Sbjct: 650 RKFIPKTSQLTHPLNKLLKKDVRWKWT 676 Score = 74.5 bits (180), Expect(3) = 1e-036 Identities = 42/157 (26%), Positives = 78/157 (48%) Frame = +1 Query: 69496 PEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREIV 69675 PE E +++D + L + G ++ + V+V+R +K A +P + ++ A+++ + ++ Sbjct: 977 PERPWESLSMDFITALPESSG-YNALLVVVDRFSKMAILLPCTKSITAEQTARMFDQRVI 1035 Query: 69676 RLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*A 69855 G II+D F S W + + S + PQTD Q+E Q +E +L Sbjct: 1036 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1095 Query: 69856 CVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALY 69966 N W + LV+ +YNN+ H + +M PFE ++ Sbjct: 1096 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1132 Score = 73.7 bits (178), Expect(3) = 1e-036 Identities = 86/373 (23%), Positives = 159/373 (42%), Gaps = 19/373 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S++ + I+ + W +P + ++ FLG Y R+ S +++P Sbjct: 612 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNKLLKKDV 671 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGK--- 68710 ++ + + +L F + +++LL DAS + +G VL QK Sbjct: 672 RWKWTPTQTQAIENIKQCLVSPPVLRHF---DFSKKILLETDASDVAVGAVLSQKHDDDK 728 Query: 68711 --VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGV--HFAVFTNHRSLQYIFN 68878 V Y S ++ + Y + D E++ ++ +LK W +YL F + T+HR+L Sbjct: 729 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 788 Query: 68879 QRDLKLRKRI--WLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAK 69052 KR+ W L+D++ I Y PG N +ADALS + P+ K Sbjct: 789 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALS----------RIVDETEPIPK 838 Query: 69053 DVQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAIL 69232 D + S +FV IS + + ++ ++ +D L + + KR + L Sbjct: 839 DSEDNSINFVNQIS----------ITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL 888 Query: 69233 DSEGVLRIKGHICVPRTGI*LD*TWRRSIV*V-----TLFIQGLLNIYLDLKQHYLCCRM 69397 ++ K I +P D R+I+ L G+ + + + + + Sbjct: 889 KDGLLINSKDQILLPN-----DTQLTRTIIKKYHEEGKLIHPGIELLTNTILRRFTWKGL 943 Query: 69398 KRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIP 69493 ++ I ++V C CQ K + KP G IP Sbjct: 944 RKQIQEYVQNCHTCQINKSRNHKPYGPLHPIP 975 Score = 63.2 bits (151), Expect(2) = 2e-044 Identities = 43/112 (38%), Positives = 62/112 (54%), Gaps = 9/112 (8%) Frame = +1 Query: 57322 DVSYSGLGAVLM*ERN-----VITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLYG 57486 D S +GAVL + + + Y S ++ + NY D ++ A++ +LK WRHYL Sbjct: 710 DASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLES 769 Query: 57487 V--KCEVYTDHRSLPYVFTQKD--LNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 ++ TDHR+L T + N R RW L+D + I Y G AN +ADALSR Sbjct: 770 TIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 829 Query: 57655 V 57657 V Sbjct: 830 V 830 Score = 59.3 bits (141), Expect = 8e-006 Identities = 29/106 (27%), Positives = 57/106 (53%) Frame = +2 Query: 67745 PDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFV 67924 P ++F +++ + + Y + P +++ M D++ L IR S + P++FV Sbjct: 393 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 452 Query: 67925 KRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQGASVSPRL 68062 +K+ + M +DY+ LNK N YP+P I+ L +QG+++ +L Sbjct: 453 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKL 498 Score = 55.0 bits (130), Expect(3) = 1e-036 Identities = 32/111 (28%), Positives = 52/111 (46%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 + G F+K+DL+S YH +++R+ D K AF+ G +E+LVM + ++ A A F +N Sbjct: 489 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 548 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCE 68364 + + EH H++ V LK L +KCE Sbjct: 549 ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 599 Score = 51.9 bits (122), Expect = 0.001 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = +3 Query: 57849 NLRYGIARRGKEAVIDEEGILM-IKERVCVPRVDDLIHTILAEAHSSRYSIHPGATKMYH 58025 NL +R +E + ++G+L+ K+++ +P L TI+ + H IHPG + + Sbjct: 873 NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 932 Query: 58026 DLKQHFLWSRMQHDIVDFVAQCPNCQQVKYEHQRPGGTLKRMP 58154 + + F W ++ I ++V C CQ K + +P G L +P Sbjct: 933 TILRRFTWKGLRKQIQEYVQNCHTCQINKSRNHKPYGPLHPIP 975 Score = 23.5 bits (49), Expect(2) = 6e-049 Identities = 13/45 (28%), Positives = 24/45 (52%) Frame = -3 Query: 39476 YQGL*VPYDVFRFDYAPSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 ++ L +PY + AP+ F + + +S V+ +MDDIL+ Sbjct: 526 FEYLVMPYGI---STAPAHFQYFINTILGEAKESHVVCYMDDILI 567 >gb|AAC95173.1| (AC005970) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1200 Score = 201 bits (507), Expect = 1e-048 Identities = 129/424 (30%), Positives = 204/424 (47%), Gaps = 10/424 (2%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H + +++ F GKV D+ ++I GKG + T +TL +V YIP +K Sbjct: 265 NHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGKGSILFLTKNGEPKTLANVYYIPDLKS 324 Query: 6053 NLISVGQFDSTG--------YAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVV 5898 N+IS+GQ G Y + + +VK R C+ + + Sbjct: 325 NIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATRSRNRLYRVELKVKNTKCLQLAAL 384 Query: 5897 AESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSF--DMGLCESCVMGKQKRVSFTKT 5724 + WH RLGH++ + +K +V K + G+ S + +C SC++GKQ R F K Sbjct: 385 NDLTK----WHARLGHINLETIKAMVTKEFVIGIPSAPKEKEICASCMLGKQARQVFPKA 440 Query: 5723 PREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKW 5544 +L++ H D+ GP + R+ + I D SR +W + LK S+ F FK + Sbjct: 441 TTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSRFMWSFLLKEKSEAFGKFKTF 500 Query: 5543 KAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKIL 5364 KA VE ++ K+K LR+D GGE+ F FC +GI P +QNG+ ER N+ L Sbjct: 501 KATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQNGVVERRNRTL 560 Query: 5363 NEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFG 5184 RS+ + +P W + YLINR + L + E +K+ HLR FG Sbjct: 561 LGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYEALKKKKPNVEHLRVFG 620 Query: 5183 CTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKD 5004 C +Y V+ KL+ ++ +G + Y D RKI+ DV FDE+ +K Sbjct: 621 CVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKIIVSRDVVFDENKSWKW 680 Query: 5003 KEQKVLEITKQVGV 4962 +++EI K+ G+ Sbjct: 681 ANSELIEIQKEPGM 694 Score = 120 bits (299), Expect = 2e-024 Identities = 64/154 (41%), Positives = 94/154 (60%), Gaps = 5/154 (3%) Frame = -2 Query: 4806 LLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFR 4627 LLL+ EP F EA + + W A D+E++S+ KN TW L LP G + + KWVF+ Sbjct: 777 LLLLINDEPWDFKEANKYRE---WRDACDEEIKSIIKNRTWSLVSLPVGIKPIGLKWVFK 833 Query: 4626 IKT*PDGK-RRFKAHLVVKG*A----TDYAEIFSPVVKLTSIRILLIIVASENMHLEQMD 4462 IK DG + KA LV KG D+ E+F+PV ++ ++R ++ + AS + +D Sbjct: 834 IKRNSDGNITKHKARLVAKGYVQKHVVDFDEVFAPVARIETVRFIIALAASNGWEVHHLD 893 Query: 4461 EKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLY 4345 KT FLHG+L + +Y+ QP+GFV G E V KL ++LY Sbjct: 894 VKTAFLHGELKENVYVTQPEGFVTKGSEEKVYKLHKALY 932 Score = 105 bits (260), Expect = 9e-020 Identities = 64/227 (28%), Positives = 107/227 (46%), Gaps = 5/227 (2%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXX----XGRSDEHS 88402 S + WY+D+ S HMTGN+ F L+E + + Sbjct: 253 SDKAWYLDNGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGKGSILFLTKNGEPKT 312 Query: 88401 IDKVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTS 88222 + VYY+ L N++S+ Q + V + + + + + LV + +Y V+ Sbjct: 313 LANVYYIPDLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATRSRNRLYRVELK 372 Query: 88221 TIYDKKLVCLSVLEKDPLL-WHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACT 88045 K CL + + L WH RL H + + ++TK+ VIG+P KE ++C +C Sbjct: 373 V---KNTKCLQLAALNDLTKWHARLGHINLETIKAMVTKEFVIGIPSAP-KEKEICASCM 428 Query: 88044 LGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 LGK + F ++ LELIH DLCGP+ + ++ Y+ VL+DD++R Sbjct: 429 LGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSR 480 Score = 95.2 bits (233), Expect(2) = 6e-028 Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQNG VER+++ LL + R+++ +P WGE I TYLINR+ L N+ ++ Sbjct: 545 YTPQQNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYE 604 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLN-SHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 L K P +L+VFGC+ + + H K + R+ ++LG + Y +LD +T+KI Sbjct: 605 ALKKKKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKI 664 Query: 65340 HVSRDVSFYEN 65372 VSRDV F EN Sbjct: 665 IVSRDVVFDEN 675 Score = 66.3 bits (159), Expect = 6e-008 Identities = 36/138 (26%), Positives = 76/138 (54%), Gaps = 8/138 (5%) Frame = -1 Query: 90103 RISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEYEAFKMKSGKSLQDMITRFTTVIN 89924 ++ ++K +WD +Q+ + G +V++ K+ +L +E++ KMK +++ + R + + Sbjct: 36 QVGKLKTSKAVWDKIQSRNLGAERVKEAKLKTLMAEFDKLKMKDNETIDECAGRLSEIST 95 Query: 89923 ELISLGKVYTTEEQVDKVLRIFPRSWEIK-VTAIREAKDLTNMTLDELVRNLKTYEMNV- 89750 + SLG+ + V K L+ P I V A+ + DL N T ++V +KTYE + Sbjct: 96 KSTSLGEDIEETKVVKKFLKSLPTKKYIHIVAALEQVLDLKNTTFKDIVGRIKTYEDKIW 155 Query: 89749 ------DKRGEGNKENFFGLKSTEQI 89690 K E +++ G+++ E++ Sbjct: 156 VLITCLKKEAEEEEKSVVGVEAEEEL 181 Score = 63.2 bits (151), Expect = 5e-007 Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 3/96 (3%) Frame = -2 Query: 87333 GLKIEQVPIFCDNTSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIA 87154 G E+V + DN SAI + KN V H R+KH+ ++HF+R+ VE GQ+S+ +Q A Sbjct: 1097 GTPCERVTLRVDNKSAIALTKNPVFHGRSKHIHRKYHFIRECVENGQVSVEHVPGVKQRA 1156 Query: 87153 DIFTMSLAREHFERNRLELGMMKI---NYELEAEGIGLS 87046 +I T +LA+ F+ R +G+ + +++L+ +G+S Sbjct: 1157 NILTKALAKIKFKDMRDLIGVQDLSNEDFKLKRVNVGVS 1195 Score = 60.1 bits (143), Expect = 5e-006 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G + Q++Y K++L+ +++ K I P+ +L +++ + YR IG Sbjct: 981 GIILKQERYAKKILEEAGINECKSILVPMNSGLELSKALDEKSIDGQQYRRSIG------ 1034 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 C R+ +P+ESH A+K++L YL+GT+ G+ + KG LVGY+D Sbjct: 1035 ------------CLRYMQDPRESHGAALKQVLRYLQGTTGYGLVFKKGDKTGLVGYSDAS 1082 Query: 87518 Y 87516 + Sbjct: 1083 H 1083 Score = 58.6 bits (139), Expect(2) = 6e-028 Identities = 35/117 (29%), Positives = 58/117 (48%) Frame = +1 Query: 64606 KKTFCVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDF 64785 +K C C+ Q + FP T +++ +L+ DL P T +Y L+++DD Sbjct: 420 EKEICASCMLGKQARQV-FPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDH 478 Query: 64786 SRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKKK 64956 SR W+ LL KS K+F + V + IK++RT G EF+S E + +++ Sbjct: 479 SRFMWSFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEE 535 Score = 43.4 bits (100), Expect = 0.51 Identities = 22/77 (28%), Positives = 42/77 (53%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 +S FEM DLG LG++++++ + L QE Y +K+L +N+ K P+ + Sbjct: 955 MSKNFEMSDLGRLTYYLGIEVTQEEDG--IILKQERYAKKILEEAGINECKSILVPMNSG 1012 Query: 3968 FKLSKEQSPKTVEERNH 3918 +LSK K+++ + + Sbjct: 1013 LELSKALDEKSIDGQQY 1029 >gb|AAA28035.1| (L23646) homology with S. pombe protease; putative [Caenorhabditis elegans] Length = 1745 Score = 141 bits (351), Expect(2) = 2e-048 Identities = 89/276 (32%), Positives = 133/276 (47%) Frame = +2 Query: 56420 PISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYRQL 56599 PI P + A E++ +Q++L + IR S +PW + V+ VKKKD S RMCI+YR++ Sbjct: 660 PIRQKPRPIPLALKPEIRKMIQKMLNQKVIRESKSPWSSPVVLVKKKDGSIRMCIDYRKV 719 Query: 56600 NKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHYEF 56779 NKV N + +P I+ + G +++ D+ +G+ Q+ + + TAF +E+ Sbjct: 720 NKVVKNNAHPLPNIEATLQSLAGKKLYTVFDMIAGFWQIPLDEKSKEITAFAIGSELFEW 779 Query: 56780 LVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXXXX 56959 V FGL +PA F G M I L + V++DD+LI SK + Sbjct: 780 NVLPFGLVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDVKEALTRIRK 839 Query: 56960 KNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASY 57139 + + KC V +LGH V+ DGV SF+GL Y Sbjct: 840 SGMKLRASKCHIAKKEVEYLGHKVTLDGVETQE-------------------SFLGLVGY 880 Query: 57140 YRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 YR+FI F+ IA LT+L V +IW E E +FQ Sbjct: 881 YRKFILNFAQIASSLTSLISAKVAWIWEKEQEIAFQ 916 Score = 123 bits (307), Expect = 3e-025 Identities = 148/571 (25%), Positives = 255/571 (43%), Gaps = 32/571 (5%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 +H ++ L +R + + SKC K V + GH V+ +G+ Sbjct: 825 QHLQDVKEALTRIRKSGMKLRASKCHIAKKEVEYLGHKVTLDGVETQ------------- 871 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFS---TSATHLNLQDVSFMWLVKCDMSFLKLKELITSA 38972 SF+GLV YYR+F+ F+ +S T L V+++W + +++F +LK+L+ Sbjct: 872 ------ESFLGLVGYYRKFILNFAQIASSLTSLISAKVAWIWEKEQEIAFQELKKLVCQT 925 Query: 38971 PILT------LLVEGGGFTIYCDASGVGVDFVLMKQG-----WFIDYVSRELKVHELNYP 38825 P+L L F IY DAS G+ VL ++G I + S+ L E Y Sbjct: 926 PVLAQPDVEAALKGDRPFMIYTDASRKGIGAVLAQEGPDGQQHPIAFASKALSPAETRYH 985 Query: 38824 TRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLS 38645 DLE ++FAL ++ +YG +TDH L ++ L R RW + ++D+ Sbjct: 986 ITDLEALAMMFALRRFKTIIYGTAITVFTDHKPLISLLKGSPLADRLWRWSIEILEFDVK 1045 Query: 38644 ILYHPGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAY 38465 I+Y GK N VA +LSR P+ + E+ L +A DI S C L Sbjct: 1046 IVYLAGKANAVADALSRGG----CPPNELEEEQTKELTSIVNAIQTELPDILDSSCWL-- 1099 Query: 38464 MGVQSSLYDRNRGWQFED*ALLSLRDQ---VLAGDGDQATLDF----DGVLKFS--GRIS 38312 L + GW+ AL + + + G + +L++ GVLK + S Sbjct: 1100 ----ERLKGEDEGWKEVIAALEGGKTKGTFKIVGIESEISLEYYKIVGGVLKNTEIEEQS 1155 Query: 38311 VPTVGDSIQL-ILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFV---SRCLCY 38144 V + I+ +L E HE + H G KM+R + + + W MR + + V ++CLC Sbjct: 1156 RSVVPEKIRTPLLKELHEGMLAGHFGIKKMWRMVHRKFYWPQMRVCVENCVRTCAKCLCA 1215 Query: 38143 QQVKVEHLRSGGAFKRLSISEWKWDRITMDFV-AGLPQTSKGVDSIYVIVDQLTKSAHFL 37967 +H + + ++ + + + D + GL + +G I I+D TK + Sbjct: 1216 N----DHSKLTSSLTPYRMT-FPLEIVACDLMDVGL--SVQGNRYILTIIDLFTKYGTAV 1268 Query: 37966 PV-QSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAF 37790 P+ V A + W + +P+ +++D+G +F + F L + + Sbjct: 1269 PIPDKKAETVLKAFVERWAIGEGR-IPLKLLTDQGKEFVNGLFAQFTHMLKIEHITTKGY 1327 Query: 37789 HPQTDDQSEH---TIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVAL 37619 + + + E TI + +E+ D A +AYN+ H N + Sbjct: 1328 NSRANGAVERFNKTIMHIMKKKTAVPMEW----DDQVVYAVYAYNNCVHENTGETPMFLM 1383 Query: 37618 YGR 37610 +GR Sbjct: 1384 HGR 1386 Score = 81.1 bits (197), Expect(2) = 2e-048 Identities = 47/115 (40%), Positives = 69/115 (59%), Gaps = 5/115 (4%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*E-----RNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWR 57471 F++Y D S G+GAVL E ++ I +AS+ L E Y DL+ A++FAL++++ Sbjct: 943 FMIYTDASRKGIGAVLAQEGPDGQQHPIAFASKALSPAETRYHITDLEALAMMFALRRFK 1002 Query: 57472 HYLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 +YG V+TDH+ L + L R RW + + D+ I+Y GKAN VADALSR Sbjct: 1003 TIIYGTAITVFTDHKPLISLLKGSPLADRLWRWSIEILEFDVKIVYLAGKANAVADALSR 1062 Score = 79.2 bits (192), Expect(3) = 4e-034 Identities = 45/113 (39%), Positives = 68/113 (59%), Gaps = 5/113 (4%) Frame = +2 Query: 68651 LLYIDASQIGLGCVLMQKGK-----VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMN 68815 ++Y DAS+ G+G VL Q+G +A+AS+ L E +Y I DLE + ++FAL+ + Sbjct: 944 MIYTDASRKGIGAVLAQEGPDGQQHPIAFASKALSPAETRYHITDLEALAMMFALRRFKT 1003 Query: 68816 YLYGVHFAVFTNHRSLQYIFNQRDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 +YG VFT+H+ L + L R W + ++D+ I+Y GK N VADALS Sbjct: 1004 IIYGTAITVFTDHKPLISLLKGSPLADRLWRWSIEILEFDVKIVYLAGKANAVADALS 1061 Score = 76.5 bits (185), Expect(3) = 4e-034 Identities = 40/116 (34%), Positives = 66/116 (56%) Frame = +2 Query: 67694 VVSEFLEVFPTDLPDVPPDSDIDFYIDVDLGTKPIFVPPYRITPAELKEMKDQLQDLLNK 67873 V+ +F +VF ++ +S + I++ G +PI P I A E++ +Q +LN+ Sbjct: 627 VIEQFQDVFAISDDELGRNSGTECVIELKEGAEPIRQKPRPIPLALKPEIRKMIQKMLNQ 686 Query: 67874 VFIRTSVSSWGAPLLFVKRKDEYMHMCIDYRQLNKITIIN*YPIPRIDDLFD*LQG 68041 IR S S W +P++ VK+KD + MCIDYR++NK+ N +P+P I+ L G Sbjct: 687 KVIRESKSPWSSPVVLVKKKDGSIRMCIDYRKVNKVVKNNAHPLPNIEATLQSLAG 742 Score = 39.1 bits (89), Expect(3) = 4e-034 Identities = 47/201 (23%), Positives = 79/201 (38%) Frame = +1 Query: 68032 VAGCFSFSKIDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN* 68211 +AG ++ D+ + + Q+ L E+ TAF +E+ V+ F L + A F M Sbjct: 740 LAGKKLYTVFDMIAGFWQIPLDEKSKEITAFAIGSELFEWNVLPFGLVISPALFQGTMEE 799 Query: 68212 AFRQYXXXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY 68391 E+H ++ +++ + + SKC I + Y Sbjct: 800 IIGDLLGVCAFVYVDDLLIASKDMEQHLQDVKEALTRIRKSGMKLRASKCHI-AKKEVEY 858 Query: 68392 HGGSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIYDFLSIASTLTRLT*KEVTFLWSDE 68571 G LD S L + R I +F IAS+LT L +V ++W E Sbjct: 859 LGHKVT------LDGVETQESFLGLVGYYRKF--ILNFAQIASSLTSLISAKVAWIWEKE 910 Query: 68572 CEVSFQKLKT*LTTARILTLP 68634 E++FQ+LK + +L P Sbjct: 911 QEIAFQELKKLVCQTPVLAQP 931 >gb|AAD41979.1|AC006438_11 (AC006438) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1264 Score = 176 bits (443), Expect = 3e-041 Identities = 110/356 (30%), Positives = 174/356 (47%), Gaps = 4/356 (1%) Frame = -3 Query: 6083 DVRYIPGIKKNLISVGQF-DSTGYAAVFGKGSWKI---VKGVIVVARGTNSGTLYTTLGC 5916 +V +IP + NLIS+ D G +F + +++I +KG ++ G LY + Sbjct: 344 NVLFIPEFRLNLISISSLTDDIGSRVIFDQHAFEIQDLIKGRML-GHGRRVANLYV-MDV 401 Query: 5915 INMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVS 5736 + +V +V WHNRL H S + + ++ K+ C C + K +++S Sbjct: 402 EDTNVSVNAVVDISTWHNRLRHASLQRLDVISESLGTTKHKNKGSDYCHVCHLAKHRKLS 461 Query: 5735 FTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFAT 5556 F + + +M H D+WGP V ++ G ++++T + D SR W+Y LK S+V Sbjct: 462 FP-SQNNVCNEIFEMLHIDIWGPFSVETVDGYQYFLTIVDDHSRATWIYLLKTKSEVLTI 520 Query: 5555 FKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERM 5376 F + +VENQ +KVK +RSDN E FT+ KGI + P QN + ER Sbjct: 521 FHDFIQQVENQYKVKVKAVRSDNAPELR---FTSLYQRKGIMAFHSCPETPEQNSVVERK 577 Query: 5375 NKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHL 5196 ++ + AR++ +P W V T +LINR PS L K E+ +Y L Sbjct: 578 HQHILNVARALMFQSQVPLFLWGECVLTAVFLINRTPSQLLSNKTPYEILSGTAPQYGQL 637 Query: 5195 RTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV 5016 RTFGC Y P++R+K ++ C +GY S GY+ D ++ I +V F E V Sbjct: 638 RTFGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDLESNAIFISRNVVFLEEV 697 Score = 135 bits (336), Expect(3) = 3e-048 Identities = 63/132 (47%), Positives = 87/132 (65%), Gaps = 1/132 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN VERKH+H+L VARAL++QS++P WGEC+LT +LINR + +L NK +++ Sbjct: 567 TPEQNSVVERKHQHILNVARALMFQSQVPLFLWGECVLTAVFLINRTPSQLLSNKTPYEI 626 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L P Y L+ FGCLC+ T + KF+PR+ IFLGY GYK++D + I Sbjct: 627 LSGTAPQYGQLRTFGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDLESNAIF 686 Query: 65343 VSRDVSFYENVFP 65381 +SR+V F E VFP Sbjct: 687 ISRNVVFLEEVFP 699 Score = 105 bits (260), Expect(2) = 5e-024 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 6/202 (2%) Frame = -2 Query: 4782 PESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK 4603 P +F EA + + +W A+D E+ ++E +TW +T LP Sbjct: 797 PTNFAEA---QGTKEWCEAVDVEIGAMESTNTWEITTLPK-------------------- 833 Query: 4602 RRFKAHLVVKG*ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKE 4423 V K+T+I++LL I AS+ ++Q+D FL+G+L++E Sbjct: 834 ----------------------VAKMTTIKLLLKISASKKWFMKQLDVSNAFLNGELEEE 871 Query: 4422 IYMQQP------KGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKD 4261 IYM+ P KG ++P ++VC+L RS+YGLKQA RQW+KKF + + F K D Sbjct: 872 IYMKLPEGYAERKGIILPS--NVVCRLKRSIYGLKQASRQWFKKFSASLLSLRFFKTHGD 929 Query: 4260 PCCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 + K YV +L+Y+DD++I ++ Sbjct: 930 HTLFLKDCGGEYVVVLVYVDDIVIASTN 957 Score = 95.6 bits (234), Expect(2) = 2e-037 Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 1/141 (0%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQK-LYRGMI 87720 I T G + Q+KY ELL M + K + P+ P KL ++ G +E + YR ++ Sbjct: 988 ITRTEAGISLCQRKYALELLASTGMINCKLVSVPMVPNLKL-MKVDGELLEDREQYRRIV 1046 Query: 87719 GSLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDL 87540 G+L+YLT +RPDI F+V +F P +H+QA R+L Y+KGT G++Y S+ L Sbjct: 1047 GTLMYLTITRPDITFAVNKLCQFSYAPTTAHLQAAHRVLQYIKGTVGQGLFYSASSDLTL 1106 Query: 87539 VGYADVDYVGYLVDRKSTTGMT 87474 G+AD D+ R STTG T Sbjct: 1107 KGFADSDWASCPDSRHSTTGFT 1128 Score = 90.1 bits (220), Expect(2) = 2e-037 Identities = 48/130 (36%), Positives = 77/130 (58%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNT 87292 F+G LIS SKKQ+ V+ S+AEAEY A AL +++W+ L+ +F D+T Sbjct: 1130 FVGDSLISLRSKKQHVVSRSSAEAEYRALALATCELVWLHTLLASLTAATTIPILFSDST 1189 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 +AI I N V H+RTKH++I H +R+ ++ G++ + E+Q+ADI T L FE Sbjct: 1190 AAIYIAINPVFHERTKHIEIDCHTVREKIDDGELKLLHVRTEDQVADIMTKPLFPNQFEH 1249 Query: 87111 NRLELGMMKI 87082 + ++ ++ I Sbjct: 1250 LKSKMSILNI 1259 Score = 83.5 bits (203), Expect(3) = 3e-048 Identities = 43/110 (39%), Positives = 65/110 (59%) Frame = +1 Query: 64624 HCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWT 64803 H H +++ FP +N N F++L +D+W P+ V T +GY+YFL IVDD SR+TW Sbjct: 453 HLAKHRKLS---FPSQNNVC-NEIFEMLHIDIWGPFSVETVDGYQYFLTIVDDHSRATWI 508 Query: 64804 QLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLKK 64953 LL KS L F+ V NQ++V +K++R+ N E T++Y +K Sbjct: 509 YLLKTKSEVLTIFHDFIQQVENQYKVKVKAVRSDNAPEL--RFTSLYQRK 556 Score = 74.5 bits (180), Expect = 2e-010 Identities = 56/165 (33%), Positives = 90/165 (53%), Gaps = 1/165 (0%) Frame = -2 Query: 88365 NLLSISQLCDK-ENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLVCLS 88189 NL+SIS L D ++VIF E+ +L +++ G+R ++Y +D + D + + Sbjct: 354 NLISISSLTDDIGSRVIFDQHAFEIQDLIKGRMLGHGRRVANLYVMD---VEDTNVSVNA 410 Query: 88188 VLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKSSFKSK 88009 V+ D WH RLRHAS +L+ +I++ L G K+K K C C L K K SF S+ Sbjct: 411 VV--DISTWHNRLRHASLQRLD-VISESL--GTTKHKNKGSDYCHVCHLAKHRKLSFPSQ 465 Query: 88008 QMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 V + E++H+D+ GP V++ Y +VDD++R T Y+ Sbjct: 466 NNVCNEI-FEMLHIDIWGPFSVETVDGYQYFLTIVDDHSRATWIYL 510 Score = 58.9 bits (140), Expect = 1e-005 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Frame = -1 Query: 490 DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVVVPTPS-CE 314 D+W +L RFN + T+NL QEI ++ Q T S+ Y+++ K LW++ C Sbjct: 126 DIWRDLNSRFNMTNLPRTYNLTQEIQDLRQSTLSLSEYYTRLKTLWDQLNSTEELDDPCT 185 Query: 313 CERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMSDESK 146 C ++ L GLNESY R Q++ P + + Y +V D S+ Sbjct: 186 CGKALRLQQKAERAKIVKFLAGLNESYAIIRRQVIAKKILPSLAEVYHIVDQDNSQ 241 Score = 53.9 bits (127), Expect = 3e-004 Identities = 49/232 (21%), Positives = 92/232 (39%) Frame = +1 Query: 62914 IQLLLPCGNDVMIWSLRGFLIHYQKTLPTTCSMSITQRHFGMNLSDRYDQANGAKLYLLH 63093 + +L+ C V W L +++ +S R +L+ R++ N + Y L Sbjct: 92 VAMLISCNTMVKSWLLNSMSPQIYRSILRMNDVSDIWR----DLNSRFNMTNLPRTYNLT 147 Query: 63094 CEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALVVES*RCITLSKTDASFNS 63273 EI L Q L ++ YYT+++ L ++L++ + C + + +K Sbjct: 148 QEIQDLRQSTLSLSEYYTRLKTLWDQLNSTEELDDPCTCGKALRLQQKAERAKIVKFLAG 207 Query: 63274 LWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPHGKLNFDSTSLHVNVAASS 63453 L NE Y I+R ++ LP++A+ + I+ ++ G N + + V+ + Sbjct: 208 L--NESYAIIRRQVIAKKILPSLAEVYHIV-----DQDNSQQGFSNVVAPPVAFQVSEVT 260 Query: 63454 STNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFPIGF 63609 N N+ + VGH ++CYK FP GF Sbjct: 261 VANI------IDPTICYVQNCPNKGRPMCSFYNRVGHIAERCYKKHGFPPGF 306 Score = 34.8 bits (78), Expect(2) = 5e-024 Identities = 26/100 (26%), Positives = 48/100 (48%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L F+++DLG K LG++I+R + ++L Q Y ++L+ + + K + P+ + Sbjct: 968 LQNLFKLRDLGDLKYFLGLEITRTEAG--ISLCQRKYALELLASTGMINCKLVSVPMVPN 1025 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 KL K + +E+R I + + TRPD Sbjct: 1026 LKLMKVDG-ELLEDREQYR------RIVGTLMYLTITRPD 1058 Score = 23.9 bits (50), Expect(3) = 3e-048 Identities = 12/28 (42%), Positives = 14/28 (49%) Frame = +2 Query: 64532 WHNRLGHVSFIKMKGISSIHISFSPKKH 64615 WHNRL H S ++ IS S KH Sbjct: 417 WHNRLRHASLQRLDVISE---SLGTTKH 441 >gb|AAF24529.1|AC007534_10 (AC007534) F7F22.15 [Arabidopsis thaliana] Length = 1862 Score = 139 bits (346), Expect(2) = 5e-048 Identities = 96/274 (35%), Positives = 137/274 (49%), Gaps = 20/274 (7%) Frame = +2 Query: 56426 SIPPYRMAPAELREL-KAQLQELLGKGFIRP-SAAPWGALVLFVKKKD------------ 56563 SI P+R L+E+ K ++ +LL G I P S + W + V V KKD Sbjct: 958 SIEPHRRLNPNLKEVVKKEILKLLDAGVIYPISDSTWVSPVHCVPKKDGMIVVKNEKDEL 1017 Query: 56564 ------ESFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIW 56725 RMCI+YR+LN + K+ + +P ID + + + +D SG+ Q+ I Sbjct: 1018 IPTRTITGHRMCIDYRKLNAASRKDHFPLPFIDQMLERLANHPYYCFLDGYSGFFQIPIH 1077 Query: 56726 ATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSK 56905 + KT F G + + FGL NAPA F M IF ++ V VF+DD +Y Sbjct: 1078 PNDQEKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIKEMVEVFMDDFSVYGP 1137 Query: 56906 SRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIW 57085 S NL + KC F + LGH +S+ G+ VD K+E + Sbjct: 1138 SFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQL 1197 Query: 57086 VKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 P V D+ SF+G A +YRRFI FS IA LT L + F + +C +SFQ Sbjct: 1198 QPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQ 1251 Score = 133 bits (332), Expect(2) = 1e-029 Identities = 88/246 (35%), Positives = 129/246 (51%), Gaps = 7/246 (2%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S+S L L VL + L + KC F +K GH +S++GI VD K+E + Sbjct: 1138 SFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQL 1197 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELI 38981 P +V ++ SF+G +YRRF++ FS A T L ++ F + C SF +K+ + Sbjct: 1198 QPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKDAL 1257 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLM----KQGWFIDYVSRELKVHELNYPTRDL 38813 SAP++ F I CDAS V VL K+ I Y SR L + Y T + Sbjct: 1258 VSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEK 1317 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL +VFA +R YL G + YTDH +L+ + ++D R RWI LL+++D+ I+ Sbjct: 1318 ELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDK 1377 Query: 38632 PGKKNMVAYSLSR 38594 G +N A LSR Sbjct: 1378 KGIENGAADHLSR 1390 Score = 85.4 bits (208), Expect = 1e-013 Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 +S++ I VD K+E + P +V I SFLG AG+YRR + + L Sbjct: 1179 ISEKGIEVDKGKVEVMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTR-----L 1233 Query: 68555 SCGLTSVRL---VFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVLMQKGK- 68710 C T + KS + L P W + DAS +G VL QK Sbjct: 1234 LCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQKIDK 1293 Query: 68711 ---VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQ 68881 V+ YASR L + +Y + EL+ VVFA + + +YL G V+T+H +L++++ + Sbjct: 1294 KLHVIYYASRTLDDAQGRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAK 1353 Query: 68882 RDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 +D K R W+ LL+++DM I+ G N AD LS Sbjct: 1354 KDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHLS 1389 Score = 81.9 bits (199), Expect(2) = 5e-048 Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*E----RNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + CD S +GAVL + +VI YASR L + Y T + +L AVVFA +++R Sbjct: 1272 FEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEKELLAVVFAFEKFRS 1331 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 YL G K VYTDH +L +++ +KD R RW+ LL++ D+ I+ G N AD LSR Sbjct: 1332 YLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHLSR 1390 Score = 54.3 bits (128), Expect = 3e-004 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 13/231 (5%) Frame = -1 Query: 38296 DSIQLILSEAHEFRYSIHLGTAK-MYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHL 38120 D ++ IL H Y H T K + + L+ + W M D +FVS+C Q Sbjct: 1490 DEVEGILLHCHGSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQ------- 1542 Query: 38119 RSGGAFKRLSISEWK------WDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFL--P 37964 R G +R + + +D +DF+ P +S G I V VD ++K + P Sbjct: 1543 RKGNISRRNEMPQNPILEVEIFDVWGIDFMGPFP-SSYGNKYILVAVDYVSKWVEAIASP 1601 Query: 37963 VQSLFSVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHP 37784 V++L + I+ RF GVP +ISD G F + + G + ++ ++P Sbjct: 1602 TNDAKVVLKLFKTIIFP--RF-GVPRVVISDGGKHFINKVFENLLKKHGVKHKVATPYNP 1658 Query: 37783 QTDDQSEHTIQ----VLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALY 37616 QT Q E + + +LE + + ++ + D A +AY + F + I F LY Sbjct: 1659 QTSGQVEISNREIKTILEKTVGITRKDWSAKLDD----ALWAYRTTFKTPIGTTPFNLLY 1714 Query: 37615 GRIC 37604 G+ C Sbjct: 1715 GKSC 1718 Score = 44.5 bits (103), Expect = 0.23 Identities = 53/192 (27%), Positives = 75/192 (38%), Gaps = 11/192 (5%) Frame = +1 Query: 68059 IDLRSCYHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXX 68238 +D S + Q+ + D KT F YG + + M F L NA ATF M F Sbjct: 1065 LDGYSGFFQIPIHPNDQEKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIKEM 1124 Query: 68239 XXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY-HGGSEK-- 68409 +L V +E L + KC + H SEK Sbjct: 1125 VEVFMDDFSVYGPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGI 1184 Query: 68410 D*DN*RLD*TCFSYSDLKFLRPCRLL--------STIYDFLSIASTLTRLT*KEVTFLWS 68565 + D +++ K ++ R I DF IA LTRL KE F + Sbjct: 1185 EVDKGKVE-VMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFD 1243 Query: 68566 DECEVSFQKLKT*LTTARILTLP 68634 D+C SFQ +K L +A ++ P Sbjct: 1244 DDCLKSFQTIKDALVSAPVVRAP 1266 Score = 44.1 bits (102), Expect = 0.30 Identities = 29/115 (25%), Positives = 54/115 (46%) Frame = +1 Query: 69640 KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSE 69819 K + K++ I GV +ISD G F++ + ++ K+ G + ++T ++PQT Q E Sbjct: 1606 KVVLKLFKTIIFPRFGVPRVVISDGGKHFINKVFENLLKKHGVKHKVATPYNPQTSGQVE 1665 Query: 69820 WIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGRGGYM 69984 + ++ +L V W L +AY ++ PF LYG+ ++ Sbjct: 1666 ISNREIKTILEKTVGITRKDWSAKLDDALWAYRTTFKTPIGTTPFNLLYGKSCHL 1720 Score = 25.4 bits (54), Expect(2) = 1e-029 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 AP+ F MT +F + V +FMDD V Sbjct: 1105 APATFQRCMTSIFSDLIKEMVEVFMDDFSV 1134 >gb|AAF29407.1|AC022354_6 (AC022354) putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1423 Score = 178 bits (448), Expect = 8e-042 Identities = 123/419 (29%), Positives = 194/419 (45%), Gaps = 4/419 (0%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 +H + +++ +N + + LADN+ + GD+ TL L +V YI + Sbjct: 378 NHLTCRRDILENVRKSTSTPIILADNRIV----MGDMVGSVTLNKHLKLHNVFYIEDLGF 433 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKIVKG----VIVVARGTNSGTLYTTLGCINMDVVAESV 5886 +LISV Q + + +++ ++ + G +Y + + V Sbjct: 434 DLISVTQLMEENDCVMQLSVPFCVLQDRTTRTLIGVGKPSGGLVYFRSTEVAVAVKGVPK 493 Query: 5885 SGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*K 5706 LWH RLGH S K ++ L K F C+ C+ KQ SF + + + Sbjct: 494 QSLELWHQRLGHPSLKVVESL-PDFVFSSHKDFSNKACDVCIRAKQTSSSFPISNNKTTE 552 Query: 5705 VLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVEN 5526 + +M H D+WGP S G+R+++T + D+SR W+Y +K+ SD + + A V+ Sbjct: 553 IF-EMIHCDIWGPYCEPSSSGARYFLTIVDDYSRGTWLYLMKNKSDTQTKLRDFIALVDR 611 Query: 5525 QSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARS 5346 Q KV+ LRSDNGGE+ T++ A GI + G +QNG ER ++ L AR+ Sbjct: 612 QFGKKVRVLRSDNGGEFLS--LTSYFLASGIVHETSCVGTPQQNGRVERKHRHLLNVARA 669 Query: 5345 MRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVH 5166 + +P FW AYLINR PS+ L K +V K Y HLRT GC Y+H Sbjct: 670 IMFQGSLPIQFWGECALNAAYLINRTPSMVLNGKTPYKVLFGKRPSYDHLRTIGCLCYIH 729 Query: 5165 VDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESVMYKDKEQKVL 4986 +K ++ KC +GY G+R +D + DV FDE + + L Sbjct: 730 NQDHHGDKFASRSRKCVFVGYPYAKKGWRVYDLEKEIFCVSRDVVFDEGIFPFHNDLNPL 789 Query: 4985 EIT 4977 +T Sbjct: 790 PLT 792 Score = 142 bits (355), Expect(2) = 7e-048 Identities = 66/135 (48%), Positives = 90/135 (65%), Gaps = 1/135 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+HLL VARA+++Q LP ++WGEC L YLINR + VL+ K + Sbjct: 647 VGTPQQNGRVERKHRHLLNVARAIMFQGSLPIQFWGECALNAAYLINRTPSMVLNGKTPY 706 Query: 65160 QVLYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 +VL+ K P+Y +L+ GCLC+ + H DKF R+ +F+GYP+ G++V D + Sbjct: 707 KVLFGKRPSYDHLRTIGCLCYIHNQDHHGDKFASRSRKCVFVGYPYAKKGWRVYDLEKEI 766 Query: 65337 IHVSRDVSFYENVFPF 65384 VSRDV F E +FPF Sbjct: 767 FCVSRDVVFDEGIFPF 782 Score = 133 bits (332), Expect = 3e-028 Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP ++ EA KW A +E+ +L N TW + DLP GK A+ +K Sbjct: 919 EPATYAEAFA---DPKWRDATKEEIDALVLNHTWDIEDLPLGKVAIGSKLSIARTV---- 971 Query: 4605 KRRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHG 4438 R+K LV G D+ E F+PV K+TS+RI L IVA+ N + QMD FLHG Sbjct: 972 -ERYKTRLVALGNRQKEGIDFDETFAPVAKMTSVRIFLSIVAARNWEVHQMDVHNAFLHG 1030 Query: 4437 DLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDP 4258 DL++E+YM+ P G+ K VC+L +SLYGLKQAPR W+ KF + + F ++ D Sbjct: 1031 DLEEEVYMKLPPGYFAQHK-GKVCRLRKSLYGLKQAPRCWFAKFATALKNYGFQQSYSDY 1089 Query: 4257 CCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 + +++L+Y+DD+++ G+S Sbjct: 1090 SLFSFNRDGVSLYVLVYVDDLIVTGNS 1116 Score = 88.2 bits (215), Expect(2) = 1e-030 Identities = 46/126 (36%), Positives = 80/126 (62%), Gaps = 1/126 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG + +KKQ V++S+AEAEY A +L +++W++ L D + + + + ++CD+T Sbjct: 1290 LGQSPVLWRTKKQKVVSMSSAEAEYRAMSLTARELVWLQALLEDLAVFLSRPMTLYCDST 1349 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 +AI+I N V ++RTKH++ HF+R+ V+ G I+ + Q+ADIFT +L F+ Sbjct: 1350 AAIHIAANPVFYERTKHIERDCHFVREKVQNGTIATVHVSTTTQLADIFTKALGSREFDV 1409 Query: 87111 NRLELGM 87091 R +LG+ Sbjct: 1410 FRDKLGI 1416 Score = 78.0 bits (189), Expect(2) = 7e-048 Identities = 39/103 (37%), Positives = 63/103 (60%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C C+ Q ++ FPI N ++ F+++ D+W PY + +G +YFL IVDD+SR T Sbjct: 530 CDVCIRAKQTSSS-FPISNNKTTE-IFEMIHCDIWGPYCEPSSSGARYFLTIVDDYSRGT 587 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFIS 64926 W L+ KS+T ++ F++LV QF ++ +R+ NG EF+S Sbjct: 588 WLYLMKNKSDTQTKLRDFIALVDRQFGKKVRVLRSDNGGEFLS 630 Score = 74.5 bits (180), Expect(2) = 1e-030 Identities = 43/136 (31%), Positives = 69/136 (50%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLL 87708 +P G ++ Q+KYV ++L+ + A+ PI L + YR ++G L+ Sbjct: 1150 SPDGIYLCQRKYVLDILQDTFLLGAQPSGFPIEQNHTLASATGSFLTDLASYRRLVGRLV 1209 Query: 87707 YLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYA 87528 YL +R D+ +SV + +F P+E H A R++ YLKGT GV S+ + G+ Sbjct: 1210 YLNVTRQDLAYSVRVLTQFMQKPREEHWTAALRVVRYLKGTPGQGVLLRANSDLHIYGWC 1269 Query: 87527 DVDYVGYLVDRKSTTG 87480 D D+ G R+S TG Sbjct: 1270 DSDFSGCPRSRRSLTG 1285 Score = 68.7 bits (165), Expect = 1e-008 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 2/235 (0%) Frame = -2 Query: 88575 RESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSID 88396 + S W +D+ + H+T + + ++ + + + Sbjct: 364 KSSSTSWILDTGATNHLTCRRDILENVRKSTSTPIILADNRIVMGDMVGSVTLNKHLKLH 423 Query: 88395 KVYYVKGLIHNLLSISQLCDKENKVIFRSTGVEVI-NLNTQKLVLIGKRDKH-IYTVDTS 88222 V+Y++ L +L+S++QL ++ + V+ S V+ + T+ L+ +GK +Y T Sbjct: 424 NVFYIEDLGFDLISVTQLMEENDCVMQLSVPFCVLQDRTTRTLIGVGKPSGGLVYFRSTE 483 Query: 88221 TIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTL 88042 K V LE LWH+RL H S + L D V +K +K C+ C Sbjct: 484 VAVAVKGVPKQSLE----LWHQRLGHPSLKVVESL--PDFVFS--SHKDFSNKACDVCIR 535 Query: 88041 GK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 K SSF +T E+IH D+ GP S Y +VDDY+R T Y+ Sbjct: 536 AKQTSSSFPISNN-KTTEIFEMIHCDIWGPYCEPSSSGARYFLTIVDDYSRGTWLYL 591 Score = 55.4 bits (131), Expect = 1e-004 Identities = 48/180 (26%), Positives = 76/180 (41%), Gaps = 8/180 (4%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDG--SCPKDKFLGLECIWERXXXXXXXXXXXXVEKGLLG 518 Y W ++ A+ R K G LDG S P++ + W+ +E L Sbjct: 33 YEEWAINLETALASRKKFGFLDGRISKPEEDSSDFDD-WKSINALLVSWIKMTIEPNLRS 91 Query: 517 SIMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFE- 341 +I + A D+W ++ + F + L +E++N Q S+ Y+ K LW+ + Sbjct: 92 NISHKPVARDLWEHIKKHFCVSNGPRVQQLRKELSNCRQDGLSIETYYGKLTKLWDNMDA 151 Query: 340 ----VVVPTPSCECERSKEYVVNXXXXXXXXXLMGLNES-YI*ARSQILLMIPFPLVNQA 176 +V C C+ LMGL+ES Y RS +L+ P P + Sbjct: 152 CRPRIVCTCGKCICDCLAVLETLREHDKVHDFLMGLDESAYGTVRSSLLIQEPLPSLEYV 211 Query: 175 YLMVMSDE 152 YL V DE Sbjct: 212 YLKVTQDE 219 Score = 53.9 bits (127), Expect = 3e-004 Identities = 24/96 (25%), Positives = 48/96 (50%) Frame = +3 Query: 62757 FYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALW 62936 +Y S+ G I + G Y W + + + + K GF++G+I+ P DS+ F W Sbjct: 11 YYSKASDHPGHVISHPLLRGDNYEEWAINLETALASRKKFGFLDGRISKPEEDSSDFDDW 70 Query: 62937 QRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 + + ++ SW ++ +L N+ + A+ LW+ + Sbjct: 71 KSINALLVSWIKMTIEPNLRSNISHKPVARDLWEHI 106 Score = 41.0 bits (94), Expect(2) = 2e-004 Identities = 19/71 (26%), Positives = 37/71 (51%) Frame = +2 Query: 64055 IGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQGPSMKSPLEIG 64234 +G LN L LH + ++ F+LISV L+ + V+ + C++Q + ++ + +G Sbjct: 411 VGSVTLNKHLKLHNVFYIEDLGFDLISVTQLMEENDCVMQLSVPFCVLQDRTTRTLIGVG 470 Query: 64235 RAHNGLYFLCS 64267 + GL + S Sbjct: 471 KPSGGLVYFRS 481 Score = 41.0 bits (94), Expect = 2.6 Identities = 45/206 (21%), Positives = 80/206 (37%), Gaps = 6/206 (2%) Frame = +1 Query: 62983 QKTLPTTCSMSITQRHFGMNLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL 63162 + L + S R ++ + +NG ++ L E++ QD L + +YY K+ KL Sbjct: 86 EPNLRSNISHKPVARDLWEHIKKHFCVSNGPRVQQLRKELSNCRQDGLSIETYYGKLTKL 145 Query: 63163 *EELSTQDTNSQ*HVCALVVES*RCITLSKTDASFNS-----LWLNE-VYMIVRGSILIM 63324 + + D VC C+ + +T + + L+E Y VR S+LI Sbjct: 146 WDNM---DACRPRIVCTCGKCICDCLAVLETLREHDKVHDFLMGLDESAYGTVRSSLLIQ 202 Query: 63325 TPLPTMAQAFSILA*EERPREVKPHGKLNFDSTSLHVNVAASSSTNFRTNYAXXXXXXXX 63504 PLP++ + + +E R K V+ + F +A Sbjct: 203 EPLPSLEYVYLKVTQDEDSRSHK------------QVSDSRPDGMVFAAQHASRVRPGER 250 Query: 63505 XXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFP 63600 T +N C GH + C+++ FP Sbjct: 251 SSSTTVCTN-----CGRTGHMAESCFQILGFP 277 Score = 33.2 bits (74), Expect(2) = 2e-004 Identities = 12/25 (48%), Positives = 20/25 (80%) Frame = +3 Query: 63918 SNNSWIIDSGASNHMTFDKTLLINI 63992 S+ SWI+D+GA+NH+T + +L N+ Sbjct: 366 SSTSWILDTGATNHLTCRRDILENV 390 >gb|AAF79879.1|AC000348_32 (AC000348) T7N9.5 [Arabidopsis thaliana] Length = 1436 Score = 164 bits (412), Expect(2) = 1e-037 Identities = 121/405 (29%), Positives = 189/405 (45%), Gaps = 17/405 (4%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + + L+ +K + V L + ++IEG G + + L +L +V +IP K N Sbjct: 430 HVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTDAL----SLHNVLFIPEFKFN 485 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIVKGV---IVVARGTNSGTLYTTLGCINMDVVAESVSG 5880 L+SV T + V +++ + +++ +G+ G LY +N+D VS Sbjct: 486 LLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYI----LNLDKSLVDVSS 541 Query: 5879 -------------SCLWHNRLGHMSAKGMKMLVAKGALEGLK-SFDMGLCESCVMGKQKR 5742 S +WH RLGH S + L L K + D C C + KQK Sbjct: 542 FPGKSVCSSVKNESEMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKH 601 Query: 5741 VSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVF 5562 + F K+ + ++ H D WGP V ++ R+++T + DFSR W+Y LK SDV Sbjct: 602 LPF-KSVNHIREKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVL 660 Query: 5561 ATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDE 5382 F + VE Q KV +RSDN E F A +GI+ P QN + E Sbjct: 661 TVFPSFLKMVETQYHTKVCSVRSDNAHELK---FNELFAKEGIKADHPCPETPEQNFVVE 717 Query: 5381 RMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYS 5202 R ++ L AR++ G+P +W + V T +LINR S + + E + + YS Sbjct: 718 RKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYS 777 Query: 5201 HLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 L+ FGC Y P+ R K + +A C +GY GY+ D + + V F E Sbjct: 778 SLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYE 837 Query: 5021 SV 5016 + Sbjct: 838 DI 839 Score = 146 bits (366), Expect(2) = 2e-047 Identities = 69/133 (51%), Positives = 91/133 (67%), Gaps = 1/133 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN VERKH+HLL VARAL++QS +P YWG+C+LT +LINRL + V++N+ ++ Sbjct: 709 TPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYER 768 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L P YS LK FGCLC+ T + KF+PR IFLGYP GYK+LD T + Sbjct: 769 LTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVS 828 Query: 65343 VSRDVSFYENVFPF 65384 +SR V FYE++FPF Sbjct: 829 ISRHVIFYEDIFPF 842 Score = 91.3 bits (223), Expect(2) = 4e-023 Identities = 62/202 (30%), Positives = 97/202 (47%), Gaps = 5/202 (2%) Frame = -2 Query: 4782 PESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGK 4603 P+ + EA D + W AM E+ + + TW + DLPAGK A+ KW+ IK DG Sbjct: 953 PQKYSEARL--DKV-WNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGS 1009 Query: 4602 -RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHG 4438 R KA LV KG D+ FSPV K+ ++++LL + +L Q+D L+G Sbjct: 1010 IERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNG 1069 Query: 4437 DLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDP 4258 DL++EIYM+ P G+ + G + +P K D Sbjct: 1070 DLEEEIYMKLPPGY-------------SEIQGQEVSPN---------------AKCHGDH 1101 Query: 4257 CCYFKKYTNSYVFLLLYLDDMLIEGSS 4177 + K ++ +L+Y+DD+LI ++ Sbjct: 1102 TLFVKAQDGFFLVVLVYVDDILIASTT 1128 Score = 91.3 bits (223), Expect(2) = 1e-035 Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVP-IFCDN 87295 F+G+ L+S SKKQ+ V++S+AEAEY A ++ +++W+ L+ F + ++CDN Sbjct: 1301 FVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDN 1360 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 +A++I N V H+RTKH++ H +R+ +E G + F + Q+AD T L + F Sbjct: 1361 EAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPFR 1420 Query: 87114 RNRLELGMMKINYELEA 87064 N +LG++ I YE +A Sbjct: 1421 ENNSKLGLLNI-YEAQA 1436 Score = 88.5 bits (216), Expect(2) = 1e-035 Identities = 50/133 (37%), Positives = 74/133 (55%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G + Q+KYV +LL D K P+ P KL + + K YR ++G L YL Sbjct: 1165 GISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLC 1224 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RPDI F+V A++ + P + H+QA+ +IL YLKGT G++Y +NFDL G++D D Sbjct: 1225 LTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSD 1284 Query: 87518 YVGYLVDRKSTTG 87480 + R+ TG Sbjct: 1285 WQTCPDTRRCVTG 1297 Score = 79.6 bits (193), Expect = 6e-012 Identities = 68/237 (28%), Positives = 108/237 (44%), Gaps = 9/237 (3%) Frame = -2 Query: 88581 EVRESKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHS 88402 E S + W +DS S H+T + L+ + + +D S Sbjct: 413 ETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTDALS 472 Query: 88401 IDKVYYVKGLIHNLLSISQLCDK-ENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYT--- 88234 + V ++ NLLS+S L ++KV F S + L + ++ G + ++Y Sbjct: 473 LHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNL 532 Query: 88233 ----VDTSTIYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKED 88066 VD S+ + K VC SV + + +WHKRL H S +++ L V+ LPK K +D Sbjct: 533 DKSLVDVSS-FPGKSVCSSV-KNESEMWHKRLGHPSFAKIDTLSD---VLMLPKQKINKD 587 Query: 88065 KV-CEACTLGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTR 87889 C C L K FKS + + EL+H+D GP V + Y +VDD++R Sbjct: 588 SSHCHVCHLSKQKHLPFKSVNHIREK-AFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSR 646 Query: 87888 NT*RYM 87871 T Y+ Sbjct: 647 ATWIYL 652 Score = 72.2 bits (174), Expect(2) = 2e-047 Identities = 34/79 (43%), Positives = 49/79 (61%) Frame = +1 Query: 64696 FDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQF 64875 F+L+ +D W P+ V T + Y+YFL IVDDFSR+TW LL KS+ L SF+ +V Q+ Sbjct: 615 FELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQY 674 Query: 64876 RVTIKSIRTYNGLEFISHE 64932 + S+R+ N E +E Sbjct: 675 HTKVCSVRSDNAHELKFNE 693 Score = 64.4 bits (154), Expect = 2e-007 Identities = 33/98 (33%), Positives = 51/98 (51%), Gaps = 8/98 (8%) Frame = +3 Query: 62751 NAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFA 62930 N +H S+ G +IV + G+ Y+SW + S KNK GF++G + PS D + F Sbjct: 56 NPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFR 115 Query: 62931 LWQRCDDMVTS--------WFFNSLPKDLADNLQYVNNAKALWDEL 63044 +W RC+ MV + +L + D Y K LW++L Sbjct: 116 IWSRCNSMVNNLPRRYQLEQAVMTLQQGKLDLSTYFTKKKTLWEQL 161 Score = 60.1 bits (143), Expect = 5e-006 Identities = 47/182 (25%), Positives = 76/182 (40%), Gaps = 2/182 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECIWERXXXXXXXXXXXXVEKGLLGSI 512 Y+ W M++++ +NK+G +DGS L S+ Sbjct: 80 YNSWSIAMRISLDAKNKLGFVDGSL------------------------------LRPSV 109 Query: 511 MYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVVV 332 +T +W N + R + L Q + + QG + YF+K K LWE+ Sbjct: 110 DDSTFR--IWSRCNSMVNNLPRR--YQLEQAVMTLQQGKLDLSTYFTKKKTLWEQLANTK 165 Query: 331 P--TPSCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMS 158 C+C++ KE + LMGL++ + RSQI M P P +N+ Y M+ Sbjct: 166 SRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPGLNEIYNMLDQ 225 Query: 157 DESK 146 DES+ Sbjct: 226 DESQ 229 Score = 57.8 bits (137), Expect(2) = 6e-009 Identities = 32/83 (38%), Positives = 45/83 (53%) Frame = +2 Query: 64013 FSYLPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSC 64192 F LPNG+ VK+ G L +L+LH +LF+ FKFNL+SV L + +SF S C Sbjct: 448 FVRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDEC 507 Query: 64193 LMQGPSMKSPLEIGRAHNGLYFL 64261 ++Q + + L G LY L Sbjct: 508 MIQALTKELMLGKGSQVGNLYIL 530 Score = 46.1 bits (107), Expect(2) = 4e-023 Identities = 28/102 (27%), Positives = 54/102 (52%) Frame = -3 Query: 4154 TRLSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLA 3975 ++LS+ F+++DLG K LG++I+R+ ++L Q Y+ +L+ +D KP + P+ Sbjct: 1137 SQLSSFFQLRDLGEPKFFLGIEIARNADG--ISLCQRKYVLDLLASSDFSDCKPSSIPME 1194 Query: 3974 NHFKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 + KLSK+ + + + ++ +C TRPD Sbjct: 1195 PNQKLSKDTGTLLEDGKQYRRILGKLQYLC-------LTRPD 1229 Score = 43.8 bits (101), Expect = 0.39 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Frame = +1 Query: 63067 NGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HV-CALVVES*RCIT 63243 N + Y L + L Q LD+++Y+TK + L E+L+ + S C V E + Sbjct: 126 NLPRRYQLEQAVMTLQQGKLDLSTYFTKKKTLWEQLANTKSRSVKKCDCDQVKE---LLE 182 Query: 63244 LSKTDASFNSLW-LNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPHGKLNFDS 63420 ++T L L++ + +R I M P P + + +++L +E R V K Sbjct: 183 EAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPGLNEIYNMLDQDESQRLVGFAAK----- 237 Query: 63421 TSLHVNVAASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFP 63600 +V + S F+T N +C +GH DKCYK+ +P Sbjct: 238 -----SVPSPSPAAFQTQ-GVLNDQNTILLAQGNFKKPKCTHCNRIGHTVDKCYKVHGYP 291 Query: 63601 IG 63606 G Sbjct: 292 PG 293 Score = 31.7 bits (70), Expect(2) = 6e-009 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +3 Query: 63915 LSNNSWIIDSGASNHMTFDKTL 63980 LS +W+IDSGAS+H+T ++ L Sbjct: 416 LSLRAWVIDSGASHHVTHERNL 437 Score = 21.2 bits (43), Expect(2) = 1e-037 Identities = 7/25 (28%), Positives = 15/25 (60%) Frame = -2 Query: 6309 EDIGDALILSVNSPVESWILDSGAS 6235 E + ++ + + +W++DSGAS Sbjct: 404 EMLTSSIPIETELSLRAWVIDSGAS 428 >emb|CAB39733.1| (AJ133521) protease, reverse transcriptase, ribonuclease H, integrase [Drosophila buzzatii] Length = 1147 Score = 145 bits (362), Expect(2) = 2e-047 Identities = 84/278 (30%), Positives = 147/278 (52%), Gaps = 2/278 (0%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVK-KKDESFRMCIEY 56590 TRPI + P E+ Q+ ELL KG I PS +P + +K+ +R+C+++ Sbjct: 292 TRPIKQRYFPKNPKMQAEINKQVDELLVKGCIEPSKSPHTRTYSNGQGRKNGKWRLCVDF 351 Query: 56591 RQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRC-G 56767 RQLN ++K+ Y +P + D ++ A + +DL GY Q+ + ++ P TAF G Sbjct: 352 RQLNSRSIKDAYPLPRVHHILDQLREARYITSLDLKDGYWQIPMEKSSRPLTAFTVPGKG 411 Query: 56768 HYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXX 56947 +++ V FGL +APA F ++ + P + ++DDI++ ++R+ Sbjct: 412 LFQWKVMPFGLHSAPATFQRALDQVIGPDMMPHAFAYLDDIIVIGRTRQEHMDNLREVFR 471 Query: 56948 XXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVG 57127 NL KC+F + +LGH V+++G+ D K+ A+ PTNV ++ +VG Sbjct: 472 RLRAANLRINIDKCDFFKKELKYLGHKVTENGIRTDPEKVAAIAQLKPPTNVKELRQYVG 531 Query: 57128 LASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 +AS+YRR++ F+S L L K+ V + W+ E + +F+ Sbjct: 532 VASWYRRYVPDFASTVHPLNALLKKGVKWEWTEEHQRAFE 571 Score = 138 bits (343), Expect = 2e-029 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 7/244 (2%) Frame = -1 Query: 39322 EHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRP 39143 EH LR V + LR L KC+F+ K + + GH V++ GIR DP K+ AI P Sbjct: 461 EHMDNLREVFRRLRAANLRINIDKCDFFKKELKYLGHKVTENGIRTDPEKVAAIAQLKPP 520 Query: 39142 TSVTEVHSFVGLVSYYRRFVEGFSTSATHLNL---QDVSFMWLVKCDMSFLKLKELITSA 38972 T+V E+ +VG+ S+YRR+V F+++ LN + V + W + +F +K +T + Sbjct: 521 TNVKELRQYVGVASWYRRYVPDFASTVHPLNALLKKGVKWEWTEEHQRAFETVKAKLTES 580 Query: 38971 PILTLLVEGGGFTIYCDASGVGVDFVLMKQG----WFIDYVSRELKVHELNYPTRDLELA 38804 P+L F + DAS G+ +L + I Y SR L E NY + E Sbjct: 581 PVLACPDFSKPFCLQTDASNYGLGAILTQTSEEGERVISYASRTLNSAERNYSATEKECL 640 Query: 38803 VIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGK 38624 I++ + R YL G + TDHM+L+ + + R RW L+ YD + Y GK Sbjct: 641 AIIWGIRKLRPYLEGYHFIVITDHMALKWLNSIESPSGRIARWALELQQYDFEVRYRKGK 700 Query: 38623 KNMVAYSLSRK 38591 +N+VA +LSR+ Sbjct: 701 QNVVADALSRQ 711 Score = 91.7 bits (224), Expect = 1e-015 Identities = 54/184 (29%), Positives = 94/184 (50%), Gaps = 2/184 (1%) Frame = -1 Query: 38296 DSIQLILSEAHEFRYSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLR 38117 D + +L E H+ + HLG+ K + Y W GM D+ ++V RC Q+ K L+ Sbjct: 782 DRRKQVLKENHDAVTAGHLGSRKTIARVAARYYWPGMYRDVRNYVQRCEVCQRYKPSQLQ 841 Query: 38116 SGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLPVQSLFSVVR 37937 + G + E W + DFV LP++ G + V +D+ +K +P++S + Sbjct: 842 AAGQM-LTQVPEEPWATVCADFVGPLPRSKHGNTMLLVFIDRFSKWTEMVPLRSA-NTAA 899 Query: 37936 LARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTD--DQSE 37763 L + + ++ G P +I+D G+QFTS F DELG R L+A + PQ + +++ Sbjct: 900 LQKAFRERILARFGAPKVLITDNGTQFTSRAFKNFLDELGVRHQLTAPYTPQENPTERAN 959 Query: 37762 HTIQVL 37745 T++ + Sbjct: 960 RTVKTM 965 Score = 85.4 bits (208), Expect = 1e-013 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 19/246 (7%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 V++ I DP+K+ I P +V ++ ++G+A +YRR + + + Sbjct: 499 VTENGIRTDPEKVAAIAQLKPPTNVKELRQYVGVASWYRRYVPDFASTVHPLNALLKKGV 558 Query: 68555 SCGLTSV-RLVFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVLMQKG---- 68707 T + F++ + L P + + L DAS GLG +L Q Sbjct: 559 KWEWTEEHQRAFETVKAK---LTESPVLACPDFSKPFCLQTDASNYGLGAILTQTSEEGE 615 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 +V++YASR L E+ Y + E + +++ ++ YL G HF V T+H +L+++ + Sbjct: 616 RVISYASRTLNSAERNYSATEKECLAIIWGIRKLRPYLEGYHFIVITDHMALKWLNSIES 675 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRP-------- 69043 R W L+ YD + Y GK NVVADALS + + + + + + P Sbjct: 676 PSGRIARWALELQQYDFEVRYRKGKQNVVADALSRQPLEEDACCLAKSRETPDGTACRWL 735 Query: 69044 --LAKDVQLLSNSFVLYISESGKCW 69112 L +D++ F Y E+G + Sbjct: 736 QRLRQDMRKAPQKFADYREEAGNIY 760 Score = 73.7 bits (178), Expect(2) = 2e-047 Identities = 45/116 (38%), Positives = 65/116 (55%), Gaps = 4/116 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*E----RNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + D S GLGA+L VI+YASR L E NY + + A+++ +++ R Sbjct: 592 FCLQTDASNYGLGAILTQTSEEGERVISYASRTLNSAERNYSATEKECLAIIWGIRKLRP 651 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK 57654 YL G V TDH +L ++ + + + R RW L+ D + Y GK NVVADALSR+ Sbjct: 652 YLEGYHFIVITDHMALKWLNSIESPSGRIARWALELQQYDFEVRYRKGKQNVVADALSRQ 711 Score = 51.9 bits (122), Expect = 0.001 Identities = 39/148 (26%), Positives = 69/148 (46%) Frame = +1 Query: 69493 IPEWKSECIAVDIVVELSRTLGKFDVIWVIVNRLTKSAHFVPVQTTYN*KKLAKIYIREI 69672 +PE + D V L R+ ++ V ++R +K VP+++ N L K + I Sbjct: 850 VPEEPWATVCADFVGPLPRSKHGNTMLLVFIDRFSKWTEMVPLRSA-NTAALQKAFRERI 908 Query: 69673 VRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML* 69852 + G +I+D GT+F S + + ELG R L+ + PQ ++ +E + ++ M+ Sbjct: 909 LARFGAPKVLITDNGTQFTSRAFKNFLDELGVRHQLTAPYTPQ-ENPTERANRTVKTMIA 967 Query: 69853 ACVIDFGNHWDQFLPLVEFAYNNSYHLS 69936 WD+ LP + A N+S S Sbjct: 968 QFAGSDQRCWDEALPELTLAVNSSVSAS 995 Score = 43.4 bits (100), Expect(2) = 3e-007 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%) Frame = +1 Query: 68053 SKIDLRSCYHQLKLREEDISKTAFQTR-YGHYEFLVMYFELTNAHATFMDLMN*AFRQYX 68229 + +DL+ Y Q+ + + TAF G +++ VM F L +A ATF ++ Sbjct: 382 TSLDLKDGYWQIPMEKSSRPLTAFTVPGKGLFQWKVMPFGLHSAPATFQRALDQVIGPDM 441 Query: 68230 XXXXXXXXXXXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRYHG---- 68397 ++EH +LR VF L+ L KC+ + + +Y G Sbjct: 442 MPHAFAYLDDIIVIGRTRQEHMDNLREVFRRLRAANLRINIDKCD-FFKKELKYLGHKVT 500 Query: 68398 --GSEKD*DN*RLD*TCFSYSDLKFLRPCRLLSTIY-----DFLSIASTLTRLT*KEVTF 68556 G D + +++K LR +++ Y DF S L L K V + Sbjct: 501 ENGIRTDPEKVAAIAQLKPPTNVKELRQYVGVASWYRRYVPDFASTVHPLNALLKKGVKW 560 Query: 68557 LWSDECEVSFQKLKT*LTTARILTLP 68634 W++E + +F+ +K LT + +L P Sbjct: 561 EWTEEHQRAFETVKAKLTESPVLACP 586 Score = 40.2 bits (92), Expect(2) = 3e-007 Identities = 28/86 (32%), Positives = 44/86 (50%), Gaps = 1/86 (1%) Frame = +2 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVK-RKDEYMHMCIDY 67963 T+PI + P E+ Q+ +LL K I S S + RK+ +C+D+ Sbjct: 292 TRPIKQRYFPKNPKMQAEINKQVDELLVKGCIEPSKSPHTRTYSNGQGRKNGKWRLCVDF 351 Query: 67964 RQLNKITIIN*YPIPRIDDLFD*LQGA 68044 RQLN +I + YP+PR+ + D L+ A Sbjct: 352 RQLNSRSIKDAYPLPRVHHILDQLREA 378 >emb|CAB42059.1| (AJ005761) Tpv2-1c [Phaseolus vulgaris] Length = 374 Score = 125 bits (310), Expect(2) = 2e-047 Identities = 58/133 (43%), Positives = 87/133 (64%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G ++ Q+KY KE+LK++KM++ + P+ P KL G V+ YR ++GSL YLT Sbjct: 106 GIFVSQEKYAKEILKKYKMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLT 165 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RPD+ SVG +RF P SH +A+KR+L Y++GT LG++Y K ++ LVGY+D D Sbjct: 166 CTRPDLSLSVGTISRFMEEPVYSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSD 225 Query: 87518 YVGYLVDRKSTTG 87480 + G + D KST+G Sbjct: 226 WCGDIDDPKSTSG 238 Score = 94.0 bits (230), Expect(2) = 2e-047 Identities = 51/128 (39%), Positives = 77/128 (59%), Gaps = 1/128 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLK-IEQVPIFCDN 87295 F+G+ S SKKQ V LST E EYV +W++ LS +K ++ I DN Sbjct: 242 FMGNTAFSWLSKKQPIVTLSTCEREYVEHLGVVCHAIWLRNLLSKMDVKQLDATVIQVDN 301 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SAI + KN V H+R+KH+D+R HF+RD+V+KG + + ++Q+ADI T L + F+ Sbjct: 302 KSAIELAKNPVNHERSKHIDVRFHFIRDHVKKGIVELVHVASQDQVADI-TKPLPKVFFD 360 Query: 87114 RNRLELGMM 87088 + + +GMM Sbjct: 361 KFKKMIGMM 369 Score = 55.8 bits (132), Expect(2) = 2e-013 Identities = 24/69 (34%), Positives = 42/69 (60%) Frame = -2 Query: 4383 KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLLYL 4204 +E V KL ++LYGLKQAPR W + D++ ++ F + + Y K + +F+ LY+ Sbjct: 1 EEKKVLKLKKALYGLKQAPRAWNTRIDTYFKENGFKQCPYEHALYAKNNGGNMIFVALYV 60 Query: 4203 DDMLIEGSS 4177 DD++ G++ Sbjct: 61 DDLIFMGNN 69 Score = 48.8 bits (114), Expect(2) = 2e-013 Identities = 28/96 (29%), Positives = 51/96 (52%) Frame = -3 Query: 4136 FEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANHFKLS 3957 FEM DLG K LG+++ + + + +SQE Y +++L ++++ + P + P+ KLS Sbjct: 84 FEMTDLGLMKFFLGLEVRQKETG--IFVSQEKYAKEILKKYKMENCNPVSIPMEPGAKLS 141 Query: 3956 KEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 K + V+ + +LV + + CTRPD Sbjct: 142 KFDGGERVDASRYRSLV-------GSLRYLTCTRPD 170 >gb|AAB70784.1| (AF015276) protease/reverse transcriptase [Volvox carteri] Length = 1053 Score = 162 bits (405), Expect(2) = 3e-047 Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 4/199 (2%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP S++EA+ + KW +MDDE+ S N TW L P G R L +WV++IK P G Sbjct: 538 EPRSYEEAVASSQADKWRTSMDDEILSQLSNKTWELGTPPPGARILDCRWVYKIKQEPGG 597 Query: 4605 KRRFKAHLVVKG----*ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHG 4438 + R+K+ LVVKG DY E+F+P + +R LL + A+ M + QMD KT FL+G Sbjct: 598 EVRYKSRLVVKGFEQRAGIDYGELFAPTTRAALLRALLAVAAARGMTVHQMDVKTAFLNG 657 Query: 4437 DLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDP 4258 DL +E++M+QP G+ G C+L +S+YGLKQAPR WY+K + + K + + DP Sbjct: 658 DLAEELWMRQPPGY-SNGDPSQACRLLKSVYGLKQAPRCWYEKLAAELGKLGYEPSASDP 716 Query: 4257 CCYFKKYTNSYVFLLLYLDDMLI 4189 + K+ ++ + +L+++DDML+ Sbjct: 717 ALFVKRGSDGSIDVLVHVDDMLV 739 Score = 97.1 bits (238), Expect(2) = 4e-033 Identities = 46/126 (36%), Positives = 75/126 (59%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPIFCDNTS 87289 LGS +S S+ Q +VA S+ EAEY AAA + LW+++ SD L V + D+ Sbjct: 927 LGSAAVSWSSQLQRTVAASSVEAEYQAAAAAVREALWLRKLASDLDLSPGAVNVQLDSQG 986 Query: 87288 AINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFERN 87109 A+++ N + R+KH+D+ HH + + V +G++ +++CT E+ +ADI T +L F R Sbjct: 987 ALSLGNNPITSVRSKHIDVHHHIVCERVARGEVKLSYCTTEDMVADILTKALGEVKFVRC 1046 Query: 87108 RLELGM 87091 R LG+ Sbjct: 1047 RTALGV 1052 Score = 74.1 bits (179), Expect(2) = 4e-033 Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 11/134 (8%) Frame = -3 Query: 87881 RGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKL----DLEGIGSTVEQKLYRGMIGS 87714 R + QQ+YV++LL+R +++AK TP+ T++ D + I + YR ++G Sbjct: 781 RSIMLTQQRYVEQLLQRHSLENAKPRATPLPQGTRVLPASDTQPI--LTDSSGYRALVGE 838 Query: 87713 LLYL-TASRPDIVF------SVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKG 87555 L YL T++RPDI ++ + AR + P ++H+ +L Y+ GT LG+ Y G Sbjct: 839 LNYLATSTRPDIAHAQTSHNTLSMLARHMSAPTKAHMGLALGVLRYVSGTRALGLRYC-G 897 Query: 87554 SNFDLVGYADVDYVGYLVDRKSTTG 87480 + GY+D D+ G R+STTG Sbjct: 898 DASNFCGYSDADWAGDPATRRSTTG 922 Score = 56.6 bits (134), Expect(2) = 3e-047 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 ++ F ++DLG A+ LGM+I +DR ++ L+Q+ Y+E++L R + +AKPR TPL Sbjct: 754 IAGCFAVRDLGEARYYLGMEIVQDRRNRSIMLTQQRYVEQLLQRHSLENAKPRATPLPQG 813 Query: 3968 FKL--SKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 ++ + + P + + ALV L + TRPD Sbjct: 814 TRVLPASDTQPILTDSSGYRALVG------ELNYLATSTRPD 849 >emb|CAA32198.1| (X14037) polyprotein [Drosophila melanogaster] Length = 1053 Score = 151 bits (378), Expect(2) = 3e-047 Identities = 86/275 (31%), Positives = 141/275 (51%) Frame = +2 Query: 56414 TRPISIPPYRMAPAELRELKAQLQELLGKGFIRPSAAPWGALVLFVKKKDESFRMCIEYR 56593 T+ + PYR++P E ++ Q+ EL+ +RPS +P+ + +L VKKK+ + R+C+++R Sbjct: 455 TKTVQRRPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFR 514 Query: 56594 QLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPKTAF*TRCGHY 56773 +LN T+ +KY +P I D ++GA F+ +D+ SG+ Q+ I +V TAF Sbjct: 515 ELNSNTISDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTAF------- 567 Query: 56774 EFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXXXXXXXXXXXX 56953 GLKNAP+ F + FVIV++DDI++ S +++ Sbjct: 568 ----VPDGLKNAPSVFQRTVINALGDLANSFVIVYMDDIMVVSPTKELALERLKTVLNVL 623 Query: 56954 XXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLA 57133 KC F +V +LG+ V + + KI ++ P VS V F+GLA Sbjct: 624 TKAGFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGLA 683 Query: 57134 SYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEE 57238 SY+R+F+ FS + L +L+ + WS E EE Sbjct: 684 SYFRKFVSGFSQLMKPLYSLSSGSGKITWSAELEE 718 Score = 116 bits (287), Expect(2) = 3e-025 Identities = 117/448 (26%), Positives = 194/448 (43%), Gaps = 9/448 (2%) Frame = -1 Query: 39307 LRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGWHRPTSVTE 39128 L+ VL L +KC F +V + G+ V IR + KI ++ P +V+ Sbjct: 616 LKTVLNVLTKAGFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSG 675 Query: 39127 VHSFVGLVSYYRRFVEGFSTSATHL-NLQDVS--FMWLVKCDMSFLKLKELITSAPILTL 38957 V F+GL SY+R+FV GFS L +L S W + + LK+ ++T+ P L + Sbjct: 676 VRQFIGLASYFRKFVSGFSQLMKPLYSLSSGSGKITWSAELEEIRLKVVTILTNEPALVI 735 Query: 38956 LVEGGGFTIYCDASGVGVDFVLM----KQGWFIDYVSRELKVHELNYPTRDLELAVIVFA 38789 ++ DAS G +L+ + I+Y S+ E Y + +LE +V A Sbjct: 736 FDPQYPIELHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSYELETLAVVKA 795 Query: 38788 LMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYHPGKKNMVA 38609 + +RHYL G ++ YTD SL+ + DL R RW L+ ++ I Y GK+ Sbjct: 796 VKHFRHYLIGREFVVYTDCNSLKASRTKIDLTPRVHRWWAYLQSFNFEIQYREGKRMAHV 855 Query: 38608 YSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQSSLYDRNR 38429 LSR + P ++ L I V L S +LA + + + Sbjct: 856 DFLSRNP----LSPEHI-------LSINKIPEKRVNLSEISSTWLLAEQRLDLEIIEIVN 904 Query: 38428 GWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRIS-VPTVGDSIQ-LILSEAHEFR 38255 + ++ A + LA D ++ GR S +P V + + ++++ HE Sbjct: 905 KLESDELA------ENLAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKWSVINQVHE-- 956 Query: 38254 YSIHLGTAKMYRDLRQHYLWSGMR*DIADFVSRCLCYQQVKVEHLRSGGAFKRLSISEWK 38075 +HLG K + Q+Y ++ M + FVS C+ + VK + + + Sbjct: 957 SIMHLGWQKTLDKVYQYYWFAKMNKYVRKFVSNCITCRSVKSSSGKVQAELHSIPKTSIP 1016 Query: 38074 WDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFLP 37964 W I +D L S + + V +D TK + LP Sbjct: 1017 WHTIHIDITGKLSGKSDLKEYVIVQIDAYTKFVYLLP 1053 Score = 70.6 bits (170), Expect = 3e-009 Identities = 96/372 (25%), Positives = 160/372 (42%), Gaps = 24/372 (6%) Frame = +2 Query: 68387 DIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXXXXX* 68551 +I + +KI ++ P +V + F+GLA Y+R+ S + P Sbjct: 653 EIRPNVRKIASLSSLPPPQTVSGVRQFIGLASYFRKFVSGFSQLMKPLYSLSSGSGKIT- 711 Query: 68552 LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ----KGKVVA 68719 S L +RL + N L Q+ + L+ DAS G G +L+ K V+ Sbjct: 712 WSAELEEIRLKVVTILTNEPALVIFDPQYP--IELHTDASACGYGAILLHRIESKPHVIE 769 Query: 68720 YASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLR 68899 Y S+ E +Y ++LE + VV A+K + +YL G F V+T+ SL+ + DL R Sbjct: 770 YFSKTTTSVESRYHSYELETLAVVKAVKHFRHYLIGREFVVYTDCNSLKASRTKIDLTPR 829 Query: 68900 KRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMGSLAMLQVSKRPLAKDVQLLSNSF 69079 W L+ ++ I Y GK D LS +S + L ++K P + Sbjct: 830 VHRWWAYLQSFNFEIQYREGKRMAHVDFLSRNPLSPEHI--LSINKIPEKR--------- 878 Query: 69080 VLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLKREAKAAILDS----EGV 69247 + +SE WL+ ++Q D ++ +I +K+ E + + +GV Sbjct: 879 -VNLSEISSTWLL------------AEQRLDLEIIEIVNKLESDELAENLAKTYDLRKGV 925 Query: 69248 L--------RIKGHICVPRTGI*LD*TWRRSI---V*VTLFIQGLLNIYLDLKQHYLCCR 69394 L R VPR ++ S+ V ++ G + Q+Y + Sbjct: 926 LYRKVQRRGRTSYLPVVPR-------AFKWSVINQVHESIMHLGWQKTLDKVYQYYWFAK 978 Query: 69395 MKRDIVDFVSRCLNCQQVKHEHQKPGGVTLRIPYLS 69502 M + + FVS C+ C+ VK K IP S Sbjct: 979 MNKYVRKFVSNCITCRSVKSSSGKVQAELHSIPKTS 1014 Score = 67.1 bits (161), Expect(2) = 3e-047 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 10/149 (6%) Frame = +1 Query: 57313 VYCDVSYSGLGAVLM*----ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYL 57480 ++ D S G GA+L+ + +VI Y S+ E Y +++L+ AVV A+K +RHYL Sbjct: 744 LHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSYELETLAVVKAVKHFRHYL 803 Query: 57481 YGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK-- 57654 G + VYTD SL T+ DL R RW L+ + I Y GK D LSR Sbjct: 804 IGREFVVYTDCNSLKASRTKIDLTPRVHRWWAYLQSFNFEIQYREGKRMAHVDFLSRNPL 863 Query: 57655 ----VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLE 57759 + S+ + +V+ ++ LA + LE++E Sbjct: 864 SPEHILSINKIPEKRVNLSEIS-STWLLAEQRLDLEIIE 901 Score = 66.7 bits (160), Expect(2) = 1e-009 Identities = 32/87 (36%), Positives = 55/87 (62%) Frame = +2 Query: 67787 TKPIFVPPYRITPAELKEMKDQLQDLLNKVFIRTSVSSWGAPLLFVKRKDEYMHMCIDYR 67966 TK + PYR++P E + ++ Q+ +L+ +R S S + +P+L VK+K+ +C+D+R Sbjct: 455 TKTVQRRPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFR 514 Query: 67967 QLNKITIIN*YPIPRIDDLFD*LQGAS 68047 +LN TI + YP+P I D L+GA+ Sbjct: 515 ELNSNTISDKYPLPLISDQIARLRGAN 541 Score = 28.6 bits (62), Expect(2) = 3e-025 Identities = 13/31 (41%), Positives = 19/31 (60%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILVI 39339 APS F + +SFVI++MDDI+V+ Sbjct: 575 APSVFQRTVINALGDLANSFVIVYMDDIMVV 605 Score = 25.4 bits (54), Expect(2) = 1e-009 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +1 Query: 68038 GCFSFSKIDLRSCYHQLKLREEDISKTAF 68124 G F+ +D+ S +HQ+ + E + TAF Sbjct: 539 GANYFTCLDMASGFHQIPIHPESVEYTAF 567 >dbj|BAA88175.1| (AP000836) Similar to putative polyprotein (AC006248) [Oryza sativa] Length = 1392 Score = 196 bits (494), Expect = 3e-047 Identities = 122/403 (30%), Positives = 193/403 (47%), Gaps = 6/403 (1%) Frame = -3 Query: 6230 HSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKN 6051 H + +E F F G V D +EI+G G V R L V YIP ++ + Sbjct: 316 HMTSRREFFTEFDSSVRGSVKFGDASGVEIKGVGSVTFTAKSGEHRLLTGVYYIPALRNS 375 Query: 6050 LISVGQFDSTGYAAVFGKGSWKIV----KGVIVVARGTNSGTLYTTLGCINMDVVAESVS 5883 +IS+GQ D G + G +I + + V RGTN + + + + A Sbjct: 376 IISLGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLYILSAQVAQPVCLAARRDD 435 Query: 5882 GSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDM--GLCESCVMGKQKRVSFTKTPREP* 5709 + WH R H+ + +K L AK + G+ D LC+ CV+ KQ+R+ F + Sbjct: 436 EAWQWHERFRHLHFEALKQLSAKEMVRGMPCLDHVEQLCDVCVVTKQRRLPFPQQTSFRA 495 Query: 5708 KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVE 5529 K L++ H D+ GP ++ GG R+++ + D S +WV L + + +A E Sbjct: 496 KERLELVHGDLCGPVTPATPGGRRYFLLLVDDLSCYMWVMVLGSKGEAADAIRHAQAAAE 555 Query: 5528 NQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHAR 5349 + K+ LR+DNGGE+ + F ++CA +GI+ P +QN + ER N+ + AR Sbjct: 556 AECGRKLHVLRTDNGGEFTAAEFASYCADEGIQRHYTTPYSPQQNDVVERRNQTVVGMAR 615 Query: 5348 SMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYV 5169 ++ GMP FW V T AY++NR P+ L + E W ++ SHLR FGC + Sbjct: 616 ALLKQRGMPAIFWGEAVVTAAYILNRSPTKALDGRTPYEAWHGRKPAVSHLRVFGCLAFA 675 Query: 5168 HVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDE 5022 + KL+ ++ IGY YR D + +++ DV FDE Sbjct: 676 K-ELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQRVRTARDVVFDE 723 Score = 161 bits (404), Expect(2) = 6e-046 Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 5/212 (2%) Frame = -2 Query: 4803 LLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRI 4624 L D+GEP SF EA E W AM EM ++++N TW L DLP G RA+ KWVF++ Sbjct: 870 LACDDGEPRSFAEA---EKHAAWRAAMQSEMDAVQENRTWELADLPRGHRAITLKWVFKL 926 Query: 4623 KT*PDGKR-RFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDE 4459 K G + KA LV +G DY + F+PV ++ S+R+LL + A E + MD Sbjct: 927 KRDEAGAIVKHKARLVARGFVQQEGIDYDDAFAPVARMESVRLLLALAAQEGWGVHHMDV 986 Query: 4458 KTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 K+ FL+GDL +E+Y+ QP GFV+PGKE V +L ++LYGL+QA R W K DS + F Sbjct: 987 KSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQASRAWNAKLDSTLKGMGF 1046 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRE 4168 ++ + Y + + + + +Y+DD++I G+ E Sbjct: 1047 EQSPHEAAIYRRGNGGNALLVGVYVDDLVITGTKDAE 1083 Score = 108 bits (268), Expect = 1e-020 Identities = 49/129 (37%), Positives = 81/129 (61%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ QQN VER+++ ++ +ARALL Q +PA +WGE ++T Y++NR L + ++ Sbjct: 595 YSPQQNDVVERRNQTVVGMARALLKQRGMPAIFWGEAVVTAAYILNRSPTKALDGRTPYE 654 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + + PA S+L+VFGCL F H K + R+TP +F+GY + Y++LD T+++ Sbjct: 655 AWHGRKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQRVR 714 Query: 65343 VSRDVSFYE 65369 +RDV F E Sbjct: 715 TARDVVFDE 723 Score = 102 bits (252), Expect(2) = 4e-041 Identities = 53/133 (39%), Positives = 84/133 (62%), Gaps = 1/133 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF-GLKIEQVPIFCDN 87295 FLG CL+S S KQ VALS+ EAEY+AA+ Q LW+ + LSD G +V + D+ Sbjct: 1254 FLGKCLVSWQSVKQQVVALSSCEAEYMAASAASTQALWLARLLSDLLGRDTGKVELRVDS 1313 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFE 87115 SA+ + KN V H+RTKH+ +R+HF+R +E+ I+ ++ ++Q+AD+ T L R F Sbjct: 1314 KSALALAKNPVFHERTKHIRVRYHFIRSYLEEWSINASYINTKDQLADLLTKPLGRIKFL 1373 Query: 87114 RNRLELGMMKINYE 87073 +GM +++++ Sbjct: 1374 ELCSRIGMAQLSHK 1387 Score = 95.6 bits (234), Expect(2) = 4e-041 Identities = 52/134 (38%), Positives = 74/134 (54%), Gaps = 1/134 (0%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G + Q Y K +++ + D TP+ KL + V+ YR ++GSL YLT Sbjct: 1117 GITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLT 1176 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLK-GSNFDLVGYADV 87522 +RPD+ FSVG +RF P H QAVKRI+ Y+ GT D G++Y K VGY+D Sbjct: 1177 HTRPDLAFSVGYVSRFMQRPTTEHQQAVKRIIRYVAGTLDHGLYYPKCPGKAHFVGYSDS 1236 Query: 87521 DYVGYLVDRKSTTGM 87477 D+ G + KST+G+ Sbjct: 1237 DHAGDIDTSKSTSGI 1251 Score = 84.7 bits (206), Expect = 2e-013 Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 5/220 (2%) Frame = -2 Query: 88557 WYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXX---XXXXXGRSDEHSI-DKV 88390 WY+D+ + HMT + F + +S EH + V Sbjct: 307 WYLDTGATHHMTSRREFFTEFDSSVRGSVKFGDASGVEIKGVGSVTFTAKSGEHRLLTGV 366 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 YY+ L ++++S+ QL + ++V+ + + + + L + + +Y + Sbjct: 367 YYIPALRNSIISLGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLYILSAQVAQP 426 Query: 88209 KKLVCLSVLEKDPLL-WHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK* 88033 VCL+ D WH+R RH L +L K++V G+P E ++C+ C + K Sbjct: 427 ---VCLAARRDDEAWQWHERFRHLHFEALKQLSAKEMVRGMPCLDHVE-QLCDVCVVTKQ 482 Query: 88032 IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDD 87898 + F + + LEL+H DLCGP+ + G + Y +LVDD Sbjct: 483 RRLPFPQQTSFRAKERLELVHGDLCGPVTPATPGGRRYFLLLVDD 527 Score = 65.6 bits (157), Expect = 1e-007 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 1/144 (0%) Frame = -1 Query: 90190 YNEADYKMLGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIA 90011 Y + DY ++ +A L+ + P+ +S +AK+ WD + + G+ + RK + Sbjct: 6 YGDVDYD---EDRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQ 62 Query: 90010 SLCSEYEAFKMKSGKSLQDMITRFTTVINELISLG-KVYTTEEQVDKVLRIFPRSWEIKV 89834 +L E+E K G+ + D R T++ +++ G Y E V+K+ R P + Sbjct: 63 ALRKEWENLAFKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIA 122 Query: 89833 TAIREAKDLTNMTLDELVRNLKTYE 89759 +I DL+ M+++E + LK + Sbjct: 123 RSIESLLDLSTMSIEEALSRLKVVD 147 Score = 52.3 bits (123), Expect(2) = 6e-046 Identities = 30/100 (30%), Positives = 49/100 (49%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 + A F+M DLGP LG+++ +D S TL Q Y ++V+ + D P TP+ Sbjct: 1091 MKATFQMSDLGPLSFYLGIEVHQDNSGITLR--QTAYAKRVVELAGLTDCNPALTPMEER 1148 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPD 3849 KLS++ + + V+ + LV + + TRPD Sbjct: 1149 LKLSRDSTAEEVDATQYRRLV-------GSLRYLTHTRPD 1181 Score = 43.8 bits (101), Expect = 0.39 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 4/121 (3%) Frame = +1 Query: 64660 FPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQT 64839 FP + + + +L+ DL P T G +YFL++VDD S W +L K Sbjct: 487 FPQQTSFRAKERLELVHGDLCGPVTPATPGGRRYFLLLVDDLSCYMWVMVLGSKGEAADA 546 Query: 64840 IKSFVSLVGNQFRVTIKSIRTYNGLEFISHETNIYLK----KKRKNTPKIMSIRTNKMVR 65007 I+ + + + +RT NG EF + E Y ++ TP S + N +V Sbjct: 547 IRHAQAAAEAECGRKLHVLRTDNGGEFTAAEFASYCADEGIQRHYTTP--YSPQQNDVVE 604 Query: 65008 LRENT 65022 R T Sbjct: 605 RRNQT 609 >dbj|BAB10790.1| (AB028613) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1864 Score = 137 bits (341), Expect(2) = 3e-047 Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 20/274 (7%) Frame = +2 Query: 56426 SIPPYRMAPAELREL-KAQLQELLGKGFIRP-SAAPWGALVLFVKKK----------DE- 56566 SI P R L+E+ K ++ +LL G I P S + W + V +V KK DE Sbjct: 959 SIEPQRRLNPNLKEVVKKEILKLLDAGVIYPISDSTWVSPVHYVPKKGGMTVVKNSKDEL 1018 Query: 56567 -------SFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIW 56725 RMCI+YR+LN + K+ + +P ID + + + +D SG+ Q+ I Sbjct: 1019 IPTRTTTGHRMCIDYRKLNAASRKDHFPLPFIDQMLERLANHPYYCFLDGYSGFFQIPIH 1078 Query: 56726 ATNVPKTAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSK 56905 + KT F G + + FGL NAPA F M IF +E V VF+DD +Y Sbjct: 1079 PNDQEKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGS 1138 Query: 56906 SRKXXXXXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIW 57085 S NL + KC F + LGH +S++G+ VD +K++ + Sbjct: 1139 SFSSCLLNLCRVLKRCEETNLVLNWEKCHFMVREGIVLGHKISEEGIEVDKAKVDVMMQL 1198 Query: 57086 VKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 P V D+ SF+G A +YRRFI FS +A LT L + F + EC +F+ Sbjct: 1199 QPPKTVKDIRSFLGHAGFYRRFIKDFSKLARPLTRLLCKETEFAFDDECLTAFK 1252 Score = 135 bits (336), Expect(2) = 2e-030 Identities = 88/250 (35%), Positives = 135/250 (53%), Gaps = 7/250 (2%) Frame = -1 Query: 39343 LYLWSWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEA 39164 +Y S+S L L VL+ + L + KC F ++ GH +S+EGI VD K++ Sbjct: 1135 VYGSSFSSCLLNLCRVLKRCEETNLVLNWEKCHFMVREGIVLGHKISEEGIEVDKAKVDV 1194 Query: 39163 ICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKL 38993 + P +V ++ SF+G +YRRF++ FS A T L ++ F + +C +F + Sbjct: 1195 MMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLI 1254 Query: 38992 KELITSAPILTLLVEGGGFTIYCDASGVGVDFVLM----KQGWFIDYVSRELKVHELNYP 38825 KE + +API+ F I C+AS V VL K+ I Y SR + ++ Y Sbjct: 1255 KEALITAPIVQAPNWDFPFEIMCNASDYAVGAVLGQRIDKKLHVIYYASRTMDDAQVRYA 1314 Query: 38824 TRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLS 38645 T + EL +VFA +R YL G + YTDH +L+ I ++D R RWI LL+++D+ Sbjct: 1315 TTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHIYAKKDTKPRLLRWILLLQEFDME 1374 Query: 38644 ILYHPGKKNMVAYSLSR 38594 I+ G +N VA LSR Sbjct: 1375 IVDKKGIENGVADHLSR 1391 Score = 88.9 bits (217), Expect = 1e-014 Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 9/205 (4%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRR-----SMISYPXXXXXXXXX 68539 +S+E I VD K++ + P +V I SFLG AG+YRR S ++ P Sbjct: 1180 ISEEGIEVDKAKVDVMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKLARPLTRLLCKET 1239 Query: 68540 XXX*LSCGLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQ----KG 68707 LT+ +L+ K + + +++ W + +AS +G VL Q K Sbjct: 1240 EFAFDDECLTAFKLI-KEALITAPIVQ--APNWDFPFEIMCNASDYAVGAVLGQRIDKKL 1296 Query: 68708 KVVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRD 68887 V+ YASR + + +Y + EL+ VVFA + + +YL G V+T+H +L++I+ ++D Sbjct: 1297 HVIYYASRTMDDAQVRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHIYAKKD 1356 Query: 68888 LKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 K R W+ LL+++DM I+ G N VAD LS Sbjct: 1357 TKPRLLRWILLLQEFDMEIVDKKGIENGVADHLS 1390 Score = 81.1 bits (197), Expect(2) = 3e-047 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*----ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + C+ S +GAVL + +VI YASR + + Y T + +L AVVFA +++R Sbjct: 1273 FEIMCNASDYAVGAVLGQRIDKKLHVIYYASRTMDDAQVRYATTEKELLAVVFAFEKFRS 1332 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 YL G K VYTDH +L +++ +KD R RW+ LL++ D+ I+ G N VAD LSR Sbjct: 1333 YLVGSKVTVYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGVADHLSR 1391 Score = 56.2 bits (133), Expect = 7e-005 Identities = 62/231 (26%), Positives = 101/231 (42%), Gaps = 4/231 (1%) Frame = -1 Query: 38296 DSIQLILSEAHEFRYSIHLGTAK-MYRDLRQHYLWSGMR*DIADFVSRC-LCYQQVKVEH 38123 D I+ IL H Y H T K + + L+ + W M D +F+S+C C ++ + Sbjct: 1492 DEIEGILLHCHGSAYGGHFATFKTVSKILQAGFWWPSMFKDAQEFISKCDSCQRRGNISR 1551 Query: 38122 LRSGGAFKRLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTKSAHFL--PVQSLF 37949 L + + D +DF+ P +S G I V VD ++K + P Sbjct: 1552 RNEMPQNPILEVEIF--DVWGIDFMGPFP-SSYGNKYILVAVDYVSKWVEAIASPTNDAR 1608 Query: 37948 SVVRLARIYIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQ 37769 V++L + I+ RF GVP +ISD G F + + G + ++ +HPQT Q Sbjct: 1609 VVLKLFKTIIFP--RF-GVPRIMISDGGKHFINKVFENLLKKHGVKHKVATPYHPQTSGQ 1665 Query: 37768 SEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRIC 37604 E + + ++ +L V A +AY + F + I F LYG+ C Sbjct: 1666 VEISNREIKAILEKIVGSTRKDWSAKLDDALWAYRTAFKTPIGTTPFNLLYGKSC 1720 Score = 45.7 bits (106), Expect = 0.10 Identities = 29/111 (26%), Positives = 52/111 (46%) Frame = +1 Query: 69652 KIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQ 69831 K++ I GV +ISD G F++ + ++ K+ G + ++T +HPQT Q E + Sbjct: 1612 KLFKTIIFPRFGVPRIMISDGGKHFINKVFENLLKKHGVKHKVATPYHPQTSGQVEISNR 1671 Query: 69832 VLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGRGGYM 69984 ++ +L V W L +AY ++ PF LYG+ ++ Sbjct: 1672 EIKAILEKIVGSTRKDWSAKLDDALWAYRTAFKTPIGTTPFNLLYGKSCHL 1722 Score = 26.6 bits (57), Expect(2) = 2e-030 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 AP+ F MT +F ++ V +FMDD V Sbjct: 1106 APATFQRCMTSIFSDLIEEMVEVFMDDFSV 1135 >gb|AAC33963.1| (AF080118) contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis thaliana] Length = 1633 Score = 166 bits (417), Expect(2) = 5e-046 Identities = 91/218 (41%), Positives = 132/218 (59%), Gaps = 9/218 (4%) Frame = -2 Query: 4791 EGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*P 4612 E EP++F +A++ E KW A ++E+ +LE+N TW++ L GK + KWVF IK P Sbjct: 936 ETEPKAFTQAMKSE---KWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNP 992 Query: 4611 DGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 DG R+KA LV +G DY E FSPV K S+++LL + A+ L QMD F Sbjct: 993 DGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAF 1052 Query: 4446 LHGDLDKEIYMQQPKGFVVPG----KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 LHG+LD+EIYM P+G+ P VC+L +SLYGLKQA RQWYK+ S + F Sbjct: 1053 LHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANF 1112 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVVCS 4138 ++ D + K S + +L+Y+DD++I + NL +++ S Sbjct: 1113 IQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRS 1159 Score = 147 bits (367), Expect(3) = 4e-047 Identities = 69/134 (51%), Positives = 93/134 (68%), Gaps = 1/134 (0%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 +T QQN VERKH+HLL +AR+LL+QS +P +YW +C+LT YLINRL + +L NK F+ Sbjct: 649 YTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFE 708 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKI 65339 +L K P Y+ LK CLC+ + N H ++KF PR P +FLGYP GYKVLD + I Sbjct: 709 LLLKKIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSI 766 Query: 65340 HVSRDVSFYENVFPF 65384 ++R+V F+E FPF Sbjct: 767 SITRNVVFHETKFPF 781 Score = 136 bits (338), Expect(2) = 4e-029 Identities = 118/405 (29%), Positives = 185/405 (45%), Gaps = 5/405 (1%) Frame = -3 Query: 6233 SHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKK 6054 SH +F+ + + V L + + I G +CI +TL L +V +P K Sbjct: 405 SHVCSDLTMFRELIHVSGVTVTLPNGTRVAITHTGTICITSTL----ILHNVLLVPDFKF 460 Query: 6053 NLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSC 5874 NLISV + T +G +++ RG LY ++ S S S Sbjct: 461 NLISVCCLELT--------------RG-LMIGRGKTYNNLYI------LETQRTSFSPS- 498 Query: 5873 LWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGL--CESCVMGKQKR---VSFTKTPREP* 5709 L H S ++ LV+ ++ LKS C + KQKR VS P Sbjct: 499 LPAATSRHPSLPALQKLVS--SIPSLKSVSSTASHCRISPLAKQKRLAYVSHNNLASSP- 555 Query: 5708 KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVE 5529 + H D+WGP + S+ G R+++T + D +R WVY +K+ S+V F + + Sbjct: 556 ---FDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIF 612 Query: 5528 NQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHAR 5349 Q + K+K +RSDN E FT F +G+ + +QN + ER ++ L AR Sbjct: 613 TQYNAKIKAIRSDNVKELA---FTKFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIAR 669 Query: 5348 SMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYV 5169 S+ +P +W++ V T AYLINR PS L K E+ ++K Y+ L++ C Y Sbjct: 670 SLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFELLLKKIPDYTLLKS--CLCYA 727 Query: 5168 HVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 + RNK + +A C +GY S GY+ D ++ I +V F E+ Sbjct: 728 STNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHET 777 Score = 83.9 bits (204), Expect(2) = 2e-025 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDN 87295 +LG+ LI+ SKKQ+ V+ S+ E+EY + A +++W++Q L D + + +FCDN Sbjct: 1303 YLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDN 1362 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 SA+++ N V H+RTKH++I H +RD ++ G++ Q+ADI T L Sbjct: 1363 KSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPL 1416 Score = 80.8 bits (196), Expect = 3e-012 Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 6/180 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLEC-IWERXXXXXXXXXXXXVEKGLLGS 515 + W R + +A+ RNK+G +DG+ K + W R V K + S Sbjct: 58 FHSWRRSIWMALNVRNKLGFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQS 117 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 +++ A +W N+ RF + D +++ Q ++ I QG+ + Y+++ + LWE+ + Sbjct: 118 LLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAYYTELQTLWEEHKNY 177 Query: 334 VPTP-----SCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYL 170 V P CEC+ + ++ LMGLNESY R IL++ P + +A+ Sbjct: 178 VDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGLNESYEQTRRHILMLKPIRTIEEAFN 237 Query: 169 MVMSDE 152 +V DE Sbjct: 238 IVTQDE 243 Score = 78.0 bits (189), Expect = 2e-011 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 2/115 (1%) Frame = +3 Query: 62703 PAVQIPVQN-LAAGISNNAFYMHPSESAGSAIVP-LVF*GTGYHSWGRGILQSQSVKNKT 62876 P +P Q+ A N ++H S+ AG +V + + +HSW R I + +V+NK Sbjct: 16 PPASVPEQSRYQADQYENPHHLHTSDHAGLVLVSERLNTASDFHSWRRSIWMALNVRNKL 75 Query: 62877 GFINGKIASPSPDSAAFALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDELI 63047 GFI+G I P D + W RC+D V++W NS+ K + +L ++ A+ +W ++ Sbjct: 76 GFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWKNML 132 Score = 66.3 bits (159), Expect(3) = 4e-047 Identities = 28/71 (39%), Positives = 45/71 (62%) Frame = +1 Query: 64696 FDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQF 64875 FDL+ LD+W P+ + + +G++YFL +VDD +R+TW ++ KS FV L+ Q+ Sbjct: 556 FDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQY 615 Query: 64876 RVTIKSIRTYN 64908 IK+IR+ N Sbjct: 616 NAKIKAIRSDN 626 Score = 61.7 bits (147), Expect(2) = 2e-025 Identities = 35/103 (33%), Positives = 53/103 (50%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 I + G + Q+KY + LL+ + K P+ P L E YR ++G Sbjct: 1177 IARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVG 1236 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKG 87588 LLYL +RPDI F+V ++F + P + H+QA ++L YLKG Sbjct: 1237 RLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKG 1279 Score = 55.8 bits (132), Expect = 9e-005 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 10/227 (4%) Frame = +1 Query: 62932 CGNDVMIWSLRGFLIHYQKTLPTTCSMSITQRHFGMNLSDRYDQANGAKLYLLHCEINGL 63111 C + V W + K + + T N+ R+ Q + ++Y + ++ + Sbjct: 98 CNDTVSTWLMNSV----SKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSKI 153 Query: 63112 TQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALVVES*RCIT---------LSKTDAS 63264 Q ++D+++YYT+++ L EE +V V RC ++ + Sbjct: 154 EQGSMDISAYYTELQTLWEEHKN-------YVDLPVCTCGRCECDAAVKWERLQQRSHVT 206 Query: 63265 FNSLWLNEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREVKPHGKL-NFDSTSLHVNV 63441 + LNE Y R IL++ P+ T+ +AF+I+ +ER + ++P K+ N D L + Sbjct: 207 KFLMGLNESYEQTRRHILMLKPIRTIEEAFNIVTQDERQKAIRPTPKVDNQDQLKLPL-- 264 Query: 63442 AASSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGHAKDKCYKLSWFPIGFK 63612 TN C VGH KCYK+ +P G+K Sbjct: 265 ----CTN----------------------------CGKVGHTVQKCYKIIGYPPGYK 289 Score = 50.0 bits (117), Expect(2) = 8e-008 Identities = 23/39 (58%), Positives = 27/39 (68%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISV 64138 LPNG RV +T G C+ S+L LH +L V FKFNLISV Sbjct: 427 LPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISV 465 Score = 47.6 bits (111), Expect(2) = 5e-046 Identities = 32/111 (28%), Positives = 58/111 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F++KDLGPA+ LG++I+ RS+ +++ Q Y + +L ++ KP + P+ + Sbjct: 1157 LRSEFKIKDLGPARFFLGLEIA--RSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPN 1214 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSIYSL 3816 L+KE ++ LV L +C TRPD F++++L Sbjct: 1215 LHLTKEMGTLLPNATSYRELVGRLLYLC-------ITRPD---ITFAVHTL 1255 Score = 42.2 bits (97), Expect = 1.1 Identities = 52/233 (22%), Positives = 80/233 (34%) Frame = -2 Query: 88569 SKQQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKV 88390 S W +DS S H+ + T+F L + + V Sbjct: 393 SSDAWIIDSGASSHVCSDLTMFRELIHVSGVTVTLPNGTRVAITHTGTICITSTLILHNV 452 Query: 88389 YYVKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYD 88210 V NL+S+ L L ++ GK ++Y ++T Sbjct: 453 LLVPDFKFNLISVCCL-----------------ELTRGLMIGRGKTYNNLYILETQRT-- 493 Query: 88209 KKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*I 88030 P L RH S L KL++ I K+ C L K Sbjct: 494 ---------SFSPSLPAATSRHPSLPALQKLVSS---IPSLKSVSSTASHCRISPLAKQK 541 Query: 88029 KSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 + ++ S ++S+ +LIH+D+ GP ++S Y LVDD TR T YM Sbjct: 542 RLAYVSHNNLASS-PFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWVYM 593 Score = 35.6 bits (80), Expect(2) = 8e-008 Identities = 15/29 (51%), Positives = 23/29 (78%) Frame = +3 Query: 63909 HVLSNNSWIIDSGASNHMTFDKTLLINII 63995 +VLS+++WIIDSGAS+H+ D T+ +I Sbjct: 390 NVLSSDAWIIDSGASSHVCSDLTMFRELI 418 Score = 25.1 bits (53), Expect(3) = 4e-047 Identities = 9/16 (56%), Positives = 12/16 (74%) Frame = +2 Query: 64946 LKKKGKIHQRSCPYAP 64993 +K++G IHQ SC Y P Sbjct: 636 VKEQGMIHQFSCAYTP 651 Score = 21.6 bits (44), Expect(2) = 4e-029 Identities = 7/10 (70%), Positives = 10/10 (100%) Frame = -2 Query: 6264 ESWILDSGAS 6235 ++WI+DSGAS Sbjct: 395 DAWIIDSGAS 404 >dbj|BAA97099.1| (AP002461) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1098 Score = 148 bits (370), Expect = 1e-032 Identities = 107/364 (29%), Positives = 168/364 (45%), Gaps = 9/364 (2%) Frame = -3 Query: 6107 LRNQRTLDDVRYIPGIKKNLISVGQF-DSTGYAAVFGKGSW----KIVKGVIVVARGTNS 5943 L N L DV ++P LISV + TG A+F + + +I Sbjct: 421 LHNAYVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAGEEREG 480 Query: 5942 GTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGM----KMLVAKGALEGLKSFDMGL 5775 +T + ++ + S + LWH+RLGH S + + + LE +KS Sbjct: 481 VYYFTGVLAARVNKGFKESSSATLWHHRLGHPSTGVLLSFPEFASSSSDLEIIKS----- 535 Query: 5774 CESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVW 5595 C+ C KQ R F+ + + V ++ H DVWGP + GS +++T + DFSR VW Sbjct: 536 CDICYRAKQAREVFSPSLNKT-TVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRSVW 594 Query: 5594 VYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAV 5415 + + S+V + + A E Q +K + SDNG E+ +F +GI + Sbjct: 595 TFLMAEKSEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEF--MCLKSFFQEQGIIHQTSC 652 Query: 5414 PGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILE 5235 +QNG ER ++ + AR+ +P+ F + T +LINR P+ L K Sbjct: 653 VDTRQQNGRVERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGKSPY 712 Query: 5234 EVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRK 5055 EV YS LRTFGC Y H ++K + ++ +C +GY G+R +D + K Sbjct: 713 EVLFGSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNK 772 Query: 5054 ILRHCDVTFDESV 5016 DV F E+V Sbjct: 773 FFVSRDVVFQETV 785 Score = 142 bits (354), Expect(3) = 4e-047 Identities = 67/139 (48%), Positives = 90/139 (64%), Gaps = 1/139 (0%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VAR L+QS LP ++ GE ILT +LINR +LH K+ + Sbjct: 653 VDTRQQNGRVERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGKSPY 712 Query: 65160 QVLYNK*PAYSYLKVFGCLCFPTLNSH-KDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 +VL+ P+YS L+ FGCLC+ + KDKF R+ +F+GYP+ G+++ D K Sbjct: 713 EVLFGSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNK 772 Query: 65337 IHVSRDVSFYENVFPFTLFE 65396 VSRDV F E VFP+ E Sbjct: 773 FFVSRDVVFQETVFPYGTIE 792 Score = 85.8 bits (209), Expect = 8e-014 Identities = 46/119 (38%), Positives = 74/119 (61%), Gaps = 5/119 (4%) Frame = -2 Query: 4821 HSLHYLLLIDEGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLN 4642 H + + + + EP S+ +A Q+++ W AM E+ +LE+N TW +T LP GK+A+ + Sbjct: 973 HRVFMVAITSDTEPTSYHQASQIKE---WCAAMGLEITALEENHTWDITTLPPGKKAIGS 1029 Query: 4641 KWVFRIKT*PDGK-RRFKAHLVVKG----*ATDYAEIFSPVVKLTSIRILLIIVASENMH 4477 KWV+++K DG R KA LV G +D+ E F+PV K+T++R LL + A+ Sbjct: 1030 KWVYKLKYNSDGTLERHKARLVALGNRQVEGSDFTETFAPVAKMTTVRFLLAVAAARQWE 1089 Query: 4476 LEQM 4465 + QM Sbjct: 1090 VHQM 1093 Score = 72.2 bits (174), Expect(3) = 4e-047 Identities = 39/102 (38%), Positives = 55/102 (53%) Frame = +1 Query: 64618 CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRST 64797 C C Q + P N T+ F+L+ D+W PY G YFL IVDDFSRS Sbjct: 536 CDICYRAKQAREVFSPSLNKTTV--CFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRSV 593 Query: 64798 WTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 WT L+ KS + I++F ++ QF +IK++ + NG EF+ Sbjct: 594 WTFLMAEKSEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEFM 635 Score = 69.5 bits (167), Expect = 7e-009 Identities = 44/180 (24%), Positives = 78/180 (42%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECIWERXXXXXXXXXXXXVEKGLLGSI 512 YS W + ++ + K+G LDG+ PK W+ ++ + ++ Sbjct: 36 YSEWAEELMNSLQAKQKLGFLDGTIPKPTTEPALSSWKAANSMIIGWIRTSIDPTIRSTV 95 Query: 511 MYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVVV 332 + + A D+W +L +RF+ + L EI Q SV VY+ + LWE+ + Sbjct: 96 AFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILACKQDGQSVLVYYGRLTKLWEELQNYK 155 Query: 331 PTPSCECERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAYLMVMSDE 152 + +C CE + + L+ L+E + RS I + P P +NQ Y V+ +E Sbjct: 156 TSRTCTCEAAPDIAKEREDDKVHQFLLNLDERFRPIRSTITVQDPLPALNQVYSRVIHEE 215 Score = 53.1 bits (125), Expect = 6e-004 Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 11/222 (4%) Frame = -2 Query: 88551 MDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYYVKGL 88372 +D+ S HMTG+ TL ++E+ + + + V +V Sbjct: 377 IDTGASHHMTGDITLLTNVEDIIPSPVTKPDGTASRATKRGTLALHNAYVLPDVLFVPDF 436 Query: 88371 IHNLLSISQLCDKENKV-IFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKKLVC 88195 L+S+++L V IF T + + T+ L+ G+ + +Y Y ++ Sbjct: 437 NCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAGEEREGVY-------YFTGVLA 489 Query: 88194 LSVLE-----KDPLLWHKRLRHASQVQLNKLITKDLVIGLPK-----NKFKEDKVCEACT 88045 V + LWH RL H S +++ P+ + + K C+ C Sbjct: 490 ARVNKGFKESSSATLWHHRLGHPST---------GVLLSFPEFASSSSDLEIIKSCDICY 540 Query: 88044 LGK*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRN 87886 K + F S + +T ELIH D+ GP R + +Y +VDD++R+ Sbjct: 541 RAKQAREVF-SPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRS 592 Score = 47.3 bits (110), Expect = 0.034 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 2/130 (1%) Frame = +1 Query: 62989 TLPTTCSMSITQRHFGMNLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*E 63168 T+ +T + + +L R+ NG + LL EI QD V YY ++ KL E Sbjct: 90 TIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILACKQDGQSVLVYYGRLTKLWE 149 Query: 63169 ELSTQDTNSQ*HVCALVVES*RCITLSKTDASFNSLWLN--EVYMIVRGSILIMTPLPTM 63342 EL T+ E+ I + D + LN E + +R +I + PLP + Sbjct: 150 ELQNYKTSR-----TCTCEAAPDIAKEREDDKVHQFLLNLDERFRPIRSTITVQDPLPAL 204 Query: 63343 AQAFSILA*EER 63378 Q +S + EE+ Sbjct: 205 NQVYSRVIHEEQ 216 Score = 43.4 bits (100), Expect = 0.51 Identities = 58/244 (23%), Positives = 98/244 (39%), Gaps = 27/244 (11%) Frame = +2 Query: 63527 QISSVSTAKMLDTRRISVINFH-------------GFP---LDLKFIKGKTALGTSVVVH 63658 Q+++VS + D ++ ++H G+P L+ G GTS + Sbjct: 246 QVAAVSAPRFRDRSSLTCTHYHRQGHDITECFLVHGYPDWWLEQNGSNGSAGRGTSGRGN 305 Query: 63659 GSRDND-----------KGKGLEGSEDRYVPDMRNTTITKQQIDQLVRILEHIQTQGGNN 63805 R N+ +GKG + + P T T DQ+ +++ +Q Q Sbjct: 306 NGRGNNNRGGRSSSSGSRGKGRANAASTHPPP----TSTPSNADQINQLISLLQAQ---- 357 Query: 63806 TRN*SREISNIASEAENFPGTLTCFSSITDIGCLSCIVK*FMDHRFWGLKPHDLR*NIIN 63985 N A+ ++ G I D G H G D+ + Sbjct: 358 ---------NPATSSQKLSGKTFTTYVIIDTGA---------SHHMTG----DIT---LL 392 Query: 63986 QHYTITIPFFSYLPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKR 64165 + IP P+G + T+ G L+++ L +LFV F LISV L+ H Sbjct: 393 TNVEDIIPSPVTKPDGTASRATKRGTLALHNAYVLPDVLFVPDFNCTLISVAKLLKHTGC 452 Query: 64166 VISFNSFSCLMQGPSMKSPLEIGRAHNGLYF 64258 V F C +Q ++ + G G+Y+ Sbjct: 453 VAIFTDTLCFLQDRFTRTLIGAGEEREGVYY 483 Score = 24.3 bits (51), Expect(3) = 4e-047 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 64514 NSTDYLWHNRLGHVS 64558 +S+ LWH+RLGH S Sbjct: 499 SSSATLWHHRLGHPS 513 >dbj|BAB01983.1| (AP002459) retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 865 Score = 183 bits (461), Expect = 2e-043 Identities = 97/204 (47%), Positives = 133/204 (64%), Gaps = 3/204 (1%) Frame = -1 Query: 39199 EGIRVDPMKIEAICGWHRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFM 39029 EG+ VD KIEAI W RPT+ TE+ SF+GL YYRRFV+GF++ A T L ++V F+ Sbjct: 296 EGVSVDLEKIEAIKDWPRPTNATEIRSFLGLAGYYRRFVKGFASMAPPLTKLTGKNVPFV 355 Query: 39028 WLVKCDMSFLKLKELITSAPILTLLVEGGGFTIYCDASGVGVDFVLMKQGWFIDYVSREL 38849 W +C+ F+ LKE++TS P+L L G + +Y DAS VG+ VLM++G I Y SR+L Sbjct: 356 WSPECEEGFVSLKEILTSTPVLALPEHGESYMVYTDASRVGLGCVLMQRGKVIAYASRQL 415 Query: 38848 KVHELNYPTRDLELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIE 38669 + HE NYPT DLE++ + +TDH SL+ I+ Q +LN R RW+E Sbjct: 416 RKHEGNYPTHDLEMSAV------------------FTDHKSLKYIITQPELNLRQRRWME 457 Query: 38668 LLKDYDLSILYHPGKKNMVAYSLSRKQ 38588 L+ DYDL I YH GK ++VA +LSRK+ Sbjct: 458 LVADYDLEIAYHHGKASVVADALSRKR 484 Score = 160 bits (400), Expect = 3e-036 Identities = 111/277 (40%), Positives = 153/277 (55%), Gaps = 25/277 (9%) Frame = +2 Query: 68384 EDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L--- 68554 E + VD +KIE IKDW RP + +I SFLGLAGYYRR + + + Sbjct: 296 EGVSVDLEKIEAIKDWPRPTNATEIRSFLGLAGYYRRFVKGFASMAPPLTKLTGKNVPFV 355 Query: 68555 ---SC--GLTSVRLVFKSSRLN*LLLEF*PYQWRERVLLYIDASQIGLGCVLMQKGKVVA 68719 C G S++ + S+ + L L + E ++Y DAS++GLGCVLMQ+GKV+A Sbjct: 356 WSPECEEGFVSLKEILTSTPV--LALP----EHGESYMVYTDASRVGLGCVLMQRGKVIA 409 Query: 68720 YASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQRDLKLR 68899 YASRQL+ HE Y HDLE+ AVFT+H+SL+YI Q +L LR Sbjct: 410 YASRQLRKHEGNYPTHDLEMS------------------AVFTDHKSLKYIITQPELNLR 451 Query: 68900 KRIWLELLKDYDMTILYHPGKTNVVADALSLKAVSMG-------------SLAMLQVSKR 69040 +R W+EL+ DYD+ I YH GK +VVADALS K V + +L + V++ Sbjct: 452 QRRWMELVADYDLEIAYHHGKASVVADALSRKRVGVAPGQSVEALVSEIRALRLCAVARE 511 Query: 69041 PLAKD----VQLLSNSFVLYISESGKCWLIWRLGHPYWSRFWSQQFDDGDLCKIRDKVLK 69208 PL + V LLS + + G G Y G +C + D+ L+ Sbjct: 512 PLGLEAVDRVDLLSRVRLAQEKDEGLIAASKAEGSKYQFAANGTILVHGRVCVLNDEELR 571 Query: 69209 RE 69214 RE Sbjct: 572 RE 573 Score = 125 bits (312), Expect(2) = 6e-047 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 15/165 (9%) Frame = +1 Query: 57304 NFIVYCDVSYSGLGAVLM*ERNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRHYLY 57483 +++VY D S GLG VLM VI YASRQL+ HE NYPTHDL+++AV Sbjct: 385 SYMVYTDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMSAV------------ 432 Query: 57484 GVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSRK--- 57654 +TDH+SL Y+ TQ +LNLR+RRWMEL+ D D+ I YH GKA+VVADALSRK Sbjct: 433 ------FTDHKSLKYIITQPELNLRQRRWMELVADYDLEIAYHHGKASVVADALSRKRVG 486 Query: 57655 ----------VGSMGSLAHSQVSRRPLAREVQTLANDFMRLEVLEK--GGFFACVEARSS 57798 V + +L V+R PL E + R+ + ++ G A +A S Sbjct: 487 VAPGQSVEALVSEIRALRLCAVAREPLGLEAVDRVDLLSRVRLAQEKDEGLIAASKAEGS 546 Score = 108 bits (267), Expect = 1e-020 Identities = 50/81 (61%), Positives = 57/81 (69%) Frame = +1 Query: 69730 SHFWLSMHKELGTRVDLSTTFHPQTDSQSEWIIQVLEDML*ACVIDFGNHWDQFLPLVEF 69909 S FW + E+GT+V +ST +HPQTD Q E IQ LEDML CV+D+G HW L LVEF Sbjct: 584 STFWRAFQAEMGTKVQMSTPYHPQTDGQFERTIQTLEDMLRMCVLDWGGHWADHLSLVEF 643 Query: 69910 AYNNSYHLSFEMAPFEALYGR 69972 AYNNSY MAPFEALYGR Sbjct: 644 AYNNSYQAGIGMAPFEALYGR 664 Score = 104 bits (257), Expect(2) = 1e-038 Identities = 51/114 (44%), Positives = 71/114 (61%) Frame = -1 Query: 37846 FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQVLEDMLHVCVLEFGGQ*DQFSPLAQFAY 37667 F FQ E+GT+V +S +HPQTD Q E TIQ LEDML +CVL++GG L +FAY Sbjct: 586 FWRAFQAEMGTKVQMSTPYHPQTDGQFERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAY 645 Query: 37666 NSIFHSNIQMVLFVALYGRICRSLVGWFESMDPRPRGTDLIQGALEQVRVFKID 37505 N+ + + I M F ALYGR CR+ + W + + G D +Q E++RV K++ Sbjct: 646 NNSYQAGIGMAPFEALYGRPCRTPLCWTQVGERSIYGADYVQETTERIRVLKLN 699 Score = 91.7 bits (224), Expect(2) = 6e-047 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = +2 Query: 57038 DGVMVDHSKIEAVKIWVKPTNVSDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFI 57217 +GV VD KIEA+K W +PTN +++ SF+GLA YYRRF+ F+S+A LT LT +NVPF+ Sbjct: 296 EGVSVDLEKIEAIKDWPRPTNATEIRSFLGLAGYYRRFVKGFASMAPPLTKLTGKNVPFV 355 Query: 57218 WSGECEESF 57244 WS ECEE F Sbjct: 356 WSPECEEGF 364 Score = 85.0 bits (207), Expect(2) = 1e-038 Identities = 56/164 (34%), Positives = 79/164 (48%) Frame = -3 Query: 37505 LRITQSRHQSYADLRR*PLRFSVRDRLFLHVSPMKGVMRFGRWGKLSPRYIGPFEILRIA 37326 ++ Q R SYAD RR L F V DR++L ++ ++G R KLS RY+GPF I+ Sbjct: 700 MKEAQDRQWSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSLRYMGPFRIVERV 759 Query: 37325 GEVAYELDLPPTFSAIHPVF*VSMRR*YIPDESHVLHYDAVELDDRLTFVEELVVILARY 37146 G VAY L+LP A H VF VSM R + + VL +L +T V +L R Sbjct: 760 GPVAYMLELPDVMRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARQVRVLERR 819 Query: 37145 *GDCYREPFLLLRSVGSIIKSRRLPWRPSRRCKSSFPACLSLQV 37014 + R+ L++ + W+P R K+ F QV Sbjct: 820 IKELQRKKISLIKVLWDCDGVTEETWQPEARMKARFKKWFEKQV 863 Score = 52.7 bits (124), Expect = 8e-004 Identities = 26/53 (49%), Positives = 33/53 (62%) Frame = +1 Query: 68503 FLSIASTLTRLT*KEVTFLWSDECEVSFQKLKT*LTTARILTLPVEREGFVVY 68661 F S+A LT+LT K V F+WS ECE F LK LT+ +L LP E ++VY Sbjct: 337 FASMAPPLTKLTGKNVPFVWSPECEEGFVSLKEILTSTPVLALPEHGESYMVY 389 Score = 46.5 bits (108), Expect = 0.059 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Frame = -3 Query: 40733 KMIGVFQRLAPSIFSGAIG-EDAHEFQLTYYEQLQSLGLLDSRGADFTAHQFRGPARQWW 40557 +M+ QR+ FSG E+A ++ S D H G A WW Sbjct: 38 RMMEQLQRIGIGYFSGGTSPEEADSWRSRVERNFGSSRCPVEYRVDLAVHFLEGDAHLWW 97 Query: 40556 RTY*ESRPFGSPPISWSQFSKAFLSRFMPRSVRYRLCDHFSRLEHGSMTISEYEARFHEF 40377 ++ R + +SW+ F F +++ P+ R+ HF L G ++ EY+ F+ Sbjct: 98 KSVTTRRRQAN--MSWADFVAEFNAKYFPQEALDRMEAHFLELTQGERSVREYDREFNRL 155 Query: 40376 SRHA 40365 +A Sbjct: 156 LVYA 159 Score = 41.0 bits (94), Expect = 2.6 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = +2 Query: 53759 FGVEFVTYQFKRDAKMWWQSYVEFQPARAPPMNWASFSSLFMEKYKPWTFRDRSRDEFLS 53938 + V+ + + DA +WW+S + R M+WA F + F KY P DR FL Sbjct: 80 YRVDLAVHFLEGDAHLWWKSVTTRR--RQANMSWADFVAEFNAKYFPQEALDRMEAHFLE 137 Query: 53939 LEQG 53950 L QG Sbjct: 138 LTQG 141 >gb|AAG10817.1|AC011808_5 (AC011808) Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1413 Score = 163 bits (409), Expect(2) = 4e-041 Identities = 90/210 (42%), Positives = 132/210 (62%), Gaps = 9/210 (4%) Frame = -2 Query: 4785 EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDG 4606 EP ++ +A Q+++ W AM E+ +LE N TWV+ LP GK+A+ KWV++IK DG Sbjct: 914 EPHTYAQARQIKE---WCDAMGMEITALEDNGTWVVCSLPVGKKAVGCKWVYKIKLNADG 970 Query: 4605 K-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLH 4441 R+KA LV KG DY + FSPV KLT++++L+ + A++ L Q+D FL+ Sbjct: 971 SLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAAAKGWSLSQLDISNAFLN 1030 Query: 4440 GDLDKEIYMQQPKGFVVPGKE----HMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCK 4273 G LD+EIYM P G+ + + VC+L +SLYGLKQA RQWY KF + F + Sbjct: 1031 GSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLKKSLYGLKQASRQWYLKFSESLKALGFTQ 1090 Query: 4272 AEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNL 4156 + D + +K NSY+ +L+Y+DD++I S RE L Sbjct: 1091 SSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELL 1129 Score = 157 bits (394), Expect = 2e-035 Identities = 115/417 (27%), Positives = 179/417 (42%), Gaps = 2/417 (0%) Frame = -3 Query: 6266 LNHGFWILVH--LSHSSPSKELFKNFKYGNFGKVYLADNKALEIEGKGDVCIKTTLRNQR 6093 + HG WI+ H K++F N V L + + G G++ + L Sbjct: 442 MTHGTWIVDSGATHHVCHVKDMFLNLDTSVQHHVNLPTGTTIRVGGVGNIAVNADL---- 497 Query: 6092 TLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKGSWKIVKGVIVVARGTNSGTLYTTLGCI 5913 L +V YIP + NL+SV + A V ++ C+ Sbjct: 498 ILKNVLYIPEFRLNLLSVSALTTDIGARV-----------------------VFDPTCCV 534 Query: 5912 NMDVVAESVSGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSFDMGLCESCVMGKQKRVSF 5733 D+ S GS L + LG K KG L C+ C KQK++++ Sbjct: 535 VHDLTKGSTIGSDLLTDVLGIFKTKN------KGLLH---------CDICQRAKQKKLTY 579 Query: 5732 TKTPREP*KVLLKMTHTDVWGPSPVSSLGGSRFYVTFIYDFSRKVWVYFLKHNSDVFATF 5553 + H DVWGP + G +++T + D +R WVY +K+ SDV F Sbjct: 580 PSR-HNICLAPFDLLHIDVWGPFSEPTQEGYHYFLTIVDDHTRVTWVYLMKYKSDVLTIF 638 Query: 5552 KKWKAEVENQSSLKVKRLRSDNGGEYDKS*FTAFCAAKGIRLMRAVPGKARQNGIDERMN 5373 + VE Q KVK +RSDN E F KGI + P QN + ER + Sbjct: 639 PDFITMVETQYDTKVKAVRSDNAPELK---FEELYRRKGIVAYHSCPETPEQNSVVERKH 695 Query: 5372 KILNEHARSMRINCGMPKTFWANVVSTVAYLINRGPSVPLGFKILEEVWIRKELKYSHLR 5193 + + AR++ +P ++W + + T ++INR PS + K L E+ +K Y+HL+ Sbjct: 696 QHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLK 755 Query: 5192 TFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGSNLFGYRFWDDKNRKILRHCDVTFDESV 5016 +FGC Y P++R+K +A C +GY S GY+ D ++ I +V F E + Sbjct: 756 SFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDL 814 Score = 146 bits (365), Expect(2) = 7e-047 Identities = 69/133 (51%), Positives = 92/133 (68%), Gaps = 1/133 (0%) Frame = +3 Query: 64986 THQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQV 65165 T +QN VERKH+H+L VARALL+QS++P YWG+CILT ++INR + V+ NK F++ Sbjct: 684 TPEQNSVVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEM 743 Query: 65166 LYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 L K P Y++LK FGCLC+ T + KFE R FLGYP GYK+LD + I Sbjct: 744 LTKKVPDYTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIF 803 Query: 65343 VSRDVSFYENVFPF 65384 +SR+V FYE++FPF Sbjct: 804 ISRNVVFYEDLFPF 817 Score = 87.0 bits (212), Expect(2) = 1e-033 Identities = 41/108 (37%), Positives = 70/108 (63%), Gaps = 1/108 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQVPI-FCDN 87295 FLG+ L++ SKKQ +++S+AEAEY A ++ +++W++ L D + + + + +CDN Sbjct: 1295 FLGTSLVAWKSKKQEVISMSSAEAEYKAMSMAVREMMWLRFLLEDLWIDVSEASVLYCDN 1354 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADI 87148 T+AI+I N V H+RTKH++ +H +R+ + G I E Q+ADI Sbjct: 1355 TAAIHIANNPVFHERTKHIERDYHHIREKIILGLIRTLHVRTENQLADI 1403 Score = 86.2 bits (210), Expect(2) = 1e-033 Identities = 49/133 (36%), Positives = 72/133 (53%) Frame = -3 Query: 87878 GTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLT 87699 G I Q+KY ELL + K P+ P KL E + + YR ++G L+YLT Sbjct: 1159 GISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQEDGELIDDAEHYRKLVGKLMYLT 1218 Query: 87698 ASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGYADVD 87519 +RPDI ++V +F + P+ H++AV +I+ YLKGT G++Y + L G+AD D Sbjct: 1219 FTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYLKGTVGQGLFYSANVDLKLSGFADSD 1278 Query: 87518 YVGYLVDRKSTTG 87480 + RK TTG Sbjct: 1279 FSSCSDSRKLTTG 1291 Score = 84.3 bits (205), Expect = 2e-013 Identities = 57/184 (30%), Positives = 92/184 (49%), Gaps = 7/184 (3%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPK-DKFLGLECIWERXXXXXXXXXXXXVEKGLLGS 515 Y+ W MK+A+ +NK+ +DGSCP+ ++ L IW R V + + GS Sbjct: 76 YNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLLRIWSRCNSMVKSWILNSVNREIYGS 135 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKF--- 344 I+ A +W +L+ RF+ + TF L Q+I ++ QG+ ++ Y++ K L + Sbjct: 136 ILSFDDAAQIWNDLHNRFHMTNLPRTFQLVQQIQDLRQGSMNLSTYYTTLKTLRDNLDGA 195 Query: 343 EVVVPTPSCE---CERSKEYVVNXXXXXXXXXLMGLNESYI*ARSQILLMIPFPLVNQAY 173 E VP C+ CE N L GLNE Y R QI++ P P + + Y Sbjct: 196 EASVPCHCCKKSTCESQIFAKSNVNRGRIIKFLAGLNEKYSIIRGQIIMKKPLPDLAEVY 255 Query: 172 LMVMSDESKNQ 140 ++ D+S+ Q Sbjct: 256 NILDQDDSQRQ 266 Score = 70.6 bits (170), Expect(2) = 7e-047 Identities = 34/86 (39%), Positives = 50/86 (57%) Frame = +1 Query: 64696 FDLLRLDLWEPYHVLTHNGYKYFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQF 64875 FDLL +D+W P+ T GY YFL IVDD +R TW L+ KS+ L F+++V Q+ Sbjct: 590 FDLLHIDVWGPFSEPTQEGYHYFLTIVDDHTRVTWVYLMKYKSDVLTIFPDFITMVETQY 649 Query: 64876 RVTIKSIRTYNGLEFISHETNIYLKK 64953 +K++R+ N E E +Y +K Sbjct: 650 DTKVKAVRSDNAPELKFEE--LYRRK 673 Score = 64.8 bits (155), Expect(2) = 1e-019 Identities = 26/99 (26%), Positives = 52/99 (52%) Frame = +3 Query: 62748 NNAFYMHPSESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAF 62927 ++ ++H ++ G +IV + G Y+ W + + KNK FI+G P + Sbjct: 51 HSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLL 110 Query: 62928 ALWQRCDDMVTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 +W RC+ MV SW NS+ +++ ++ ++A +W++L Sbjct: 111 RIWSRCNSMVKSWILNSVNREIYGSILSFDDAAQIWNDL 149 Score = 61.3 bits (146), Expect(2) = 1e-019 Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 5/194 (2%) Frame = +1 Query: 63040 NLSDRYDQANGAKLYLLHCEINGLTQDNLDVTSYYTKMRKL*EELSTQDTNSQ*HVCALV 63219 +L +R+ N + + L +I L Q ++++++YYT ++ L + L + + H C Sbjct: 148 DLHNRFHMTNLPRTFQLVQQIQDLRQGSMNLSTYYTTLKTLRDNLDGAEASVPCHCCKKS 207 Query: 63220 VES*RCITLSKTDASFNSLWL---NEVYMIVRGSILIMTPLPTMAQAFSILA*EERPREV 63390 + S + +L NE Y I+RG I++ PLP +A+ ++IL ++ R+ Sbjct: 208 TCESQIFAKSNVNRGRIIKFLAGLNEKYSIIRGQIIMKKPLPDLAEVYNILDQDDSQRQF 267 Query: 63391 KPH-GKLNFDSTSLHVNVAA-SSSTNFRTNYAXXXXXXXXXXXPTNRSNIFGEYCKNVGH 63564 + F T V A +SS+N ++ +I Y GH Sbjct: 268 SNNVASAAFQVTKDDVQPGALASSSNM------PQPGMLGAVQKKDKKSICSHY-GYTGH 320 Query: 63565 AKDKCYKLSWFPIGFKVHK 63621 ++CYKL +P+G+K K Sbjct: 321 TSERCYKLHGYPVGWKKGK 339 Score = 41.4 bits (95), Expect = 2.0 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%) Frame = +2 Query: 63590 HGFPLDLKFIKGKTALGTSVVVHGSRDNDKGKGLEGSEDRYVPDMRNT---------TIT 63742 HG+P+ K KGK+ + S+ + K + + +NT ++ Sbjct: 329 HGYPVGWK--KGKSFY--EKIAQASQSSQAPKPNSAVTAQVTGNSQNTPAGLESLIGNMS 384 Query: 63743 KQQIDQLVRILEHIQTQGGNNTRN*SREISNIASEAENFPGTLTCFSSITDIGCLSCIVK 63922 K QI L+ + Q Q + N + +++ N P +T SS + + + Sbjct: 385 KDQIQNLIALFSS-QLQPASPVLN----TAPMSTSHNNDPSGITFSSSTFSFIGILTVSE 439 Query: 63923 *FMDHRFW----GLKPHDLR*NIINQHYTITIPFFSYLPNGYRVKVTEIGDACLNSSLTL 64090 M H W G H + + ++ LP G ++V +G+ +N+ L L Sbjct: 440 TEMTHGTWIVDSGATHHVCHVKDMFLNLDTSVQHHVNLPTGTTIRVGGVGNIAVNADLIL 499 Query: 64091 HKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLM 64198 +L++ F+ NL+SV +L + + F+ C++ Sbjct: 500 KNVLYIPEFRLNLLSVSALTTDIGARVVFDPTCCVV 535 Score = 34.4 bits (77), Expect(2) = 4e-041 Identities = 24/103 (23%), Positives = 49/103 (47%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + +++DLG + LG++I+R+ +++ Q Y ++L+ + K + P+ + Sbjct: 1133 LQRSSKLRDLGTLRYFLGLEIARNTDG--ISICQRKYTLELLAETGLLGCKSSSVPMEPN 1190 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 KLS+E + ++ LV + + TRPD Y Sbjct: 1191 QKLSQEDGELIDDAEHYRKLV-------GKLMYLTFTRPDITY 1226 >dbj|BAA74713.1| (AB014676) copia-like retrotransposable element [Bombyx mori] Length = 1316 Score = 194 bits (489), Expect = 1e-046 Identities = 127/395 (32%), Positives = 201/395 (50%), Gaps = 1/395 (0%) Frame = -3 Query: 6176 KVYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGK 5997 K+Y+A+ + L KG + +K N + + G+ N++SV + G + F K Sbjct: 344 KIYVANGQYLFSSKKGILNVK--YNNLPIKIEALLVKGLSHNILSVKKLLEKGNSVRFHK 401 Query: 5996 GSWKIVKGVIVVARGTNSGTLYTTLGCINMDVVAESVSGSCLWHNRLGHMSAKGMKMLVA 5817 S I KG ++ GT +LY +N++ + LWH RLGH + K +K+L Sbjct: 402 NSVSIAKGNNIIY-GTMLNSLYAINLTLNLEQCYSINNDKDLWHKRLGHANRKHLKLLKL 460 Query: 5816 KGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLGGSR 5637 + + C CV GK R+ F+ TP+ K + ++ HTD+ GP + +L Sbjct: 461 PISEKP--------CGICVEGKSTRLPFSTTPKPRSKYIGELIHTDISGPINIPTLTNEV 512 Query: 5636 FYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FT 5457 ++ T I D++ VY L+ S+ ++ +E Q KVK++RSDNGGE+ Sbjct: 513 YFHTIIDDYTHFCEVYLLQRKSEATDRLIEYVNRMERQIECKVKKIRSDNGGEFKNEKLN 572 Query: 5456 AFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVAYLI 5277 FC KGI +P + NG+ ERMN+ + AR++ I G+PKT W V Y Sbjct: 573 KFCKDKGILQQFTLPYSPQSNGVSERMNRNIYNRARTLLIESGLPKTLWGEAVRCAVYQT 632 Query: 5276 NRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIGYGS 5097 NR PS E+++ K+L + LR FG ++VH+ P K++KL +A + L+GY Sbjct: 633 NRCPSSNFQTPA-EKMFGNKDL--TRLRIFGSKSWVHIIP-KQDKLLQRAKEMRLVGYSP 688 Query: 5096 NLFGYRFWDDKNRKILRHCDVTFDESVM-YKDKEQK 4992 N GYR WD + K++ DV DE+ + YK+ E+K Sbjct: 689 N--GYRLWDPTSNKVIVSRDVRIDETQLNYKETEEK 722 Score = 149 bits (372), Expect(2) = 8e-041 Identities = 92/250 (36%), Positives = 152/250 (60%), Gaps = 10/250 (4%) Frame = -2 Query: 4899 EESEEVTR------EQVLRRSSRTIRAP---DRYSHSLHYLLLIDEGEPESFDEALQVED 4747 EE+E++ + ++ + RS R IR P + Y ++ Y LL G+P+ F++A+ +D Sbjct: 783 EENEKLNKKGRINIQKYITRSGREIRKPKNLEEYDLNIAYCLL--SGDPQEFEDAIHDKD 840 Query: 4746 SIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*PDGKRRFKAHLVVKG* 4567 WE A+ E+ S K +TW LP G +A+ KWVFR K +G +R A LV KG Sbjct: 841 ---WEKAIKTELNSQVKLETWEEATLPMGSKAIDTKWVFRTKQ--NGTKR--ARLVAKGF 893 Query: 4566 ATDYAEI-FSPVVKLTSIRILLIIVASENMHLEQMDEKTVFLHGDLDKEIYMQQPKGFVV 4390 + ++PV KL++IR+++ + ++ L+Q+D T FL+G L+ +Y++ PKG + Sbjct: 894 QQQNNDNHYAPVAKLSTIRLMMSLAVQLDLSLKQLDVPTAFLNGKLNDNVYIKCPKGMEI 953 Query: 4389 PGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEFCKAEKDPCCYFKKYTNSYVFLLL 4210 E V KL R+LYGLK+AP+ W ++F +F+T+ F +++ D C Y K +++LL Sbjct: 954 --SEGKVLKLKRALYGLKEAPKCWNQRFHNFVTQKGFVQSQHDLCLYGK----GKIWILL 1007 Query: 4209 YLDDMLIEGSSMRENNNLDK 4150 Y+DD+L G+S L+K Sbjct: 1008 YVDDILYLGNSNEMIKELEK 1027 Score = 85.0 bits (207), Expect(2) = 5e-032 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%) Frame = -3 Query: 87869 IHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIGSLLYLTA-S 87693 I Q + +K LL+++ M D K TP+ +++ +E ++ +IGSLLY+ S Sbjct: 1054 IRQTEIIKRLLEKYHMQDCKSSKTPMEINFNVNIPSPSDIIEVP-FKELIGSLLYIAVNS 1112 Query: 87692 RPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNF-DLVGYADVDY 87516 RPDI ++V +RF P + A KR+L YLKGTS G+ Y K + L+ Y+D D+ Sbjct: 1113 RPDIAYAVSFLSRFLDKPTQELWTASKRVLRYLKGTSHQGLIYRKTEEYTKLIAYSDADW 1172 Query: 87515 VGYLVDRKSTTG 87480 DRKST+G Sbjct: 1173 AADRTDRKSTSG 1184 Score = 82.3 bits (200), Expect(2) = 5e-032 Identities = 44/112 (39%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDF-GLKIEQVPIFCDN 87295 + G LI+ S+KQ ALSTAEAEYVA A ++++ IK LSD I + DN Sbjct: 1188 YQGQNLITWFSRKQTCTALSTAEAEYVAGAHSMSELIHIKGILSDILSTSIISAHLLIDN 1247 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMS 87136 S I +++N + K +KH++I++H+++D + K +S+++ E I+DIFT S Sbjct: 1248 QSTIKLIQNQMNTKASKHIEIKYHYIKDLIYKKIVSISYVPTNENISDIFTKS 1300 Score = 77.6 bits (188), Expect = 2e-011 Identities = 50/164 (30%), Positives = 80/164 (48%) Frame = -2 Query: 88383 VKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIGKRDKHIYTVDTSTIYDKK 88204 VKGL HN+LS+ +L +K N V F V + N ++ G +Y ++ + ++ Sbjct: 377 VKGLSHNILSVKKLLEKGNSVRFHKNSVSIAKGNN---IIYGTMLNSLYAINLTLNLEQ- 432 Query: 88203 LVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLGK*IKS 88024 C S+ D LWHKRL HA++ L ++ LP + +K C C GK + Sbjct: 433 --CYSI-NNDKDLWHKRLGHANRKHLK-------LLKLPIS----EKPCGICVEGKSTRL 478 Query: 88023 SFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYT 87892 F + S ELIH D+ GP+ + + ++Y ++DDYT Sbjct: 479 PFSTTPKPRSKYIGELIHTDISGPINIPTLTNEVYFHTIIDDYT 522 Score = 58.6 bits (139), Expect = 1e-005 Identities = 40/129 (31%), Positives = 64/129 (49%) Frame = +3 Query: 64983 HTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHFQ 65162 ++ Q NG ER ++++ AR LL +S LP WGE + Y NR +S + Sbjct: 588 YSPQSNGVSERMNRNIYNRARTLLIESGLPKTLWGEAVRCAVYQTNRCPSSNFQTPAE-K 646 Query: 65163 VLYNK*PAYSYLKVFGCLCFPTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKKIH 65342 + NK + L++FG + + +DK R +GY + NGY++ D ++ K+ Sbjct: 647 MFGNK--DLTRLRIFGSKSWVHIIPKQDKLLQRAKEMRLVGY--SPNGYRLWDPTSNKVI 702 Query: 65343 VSRDVSFYE 65369 VSRDV E Sbjct: 703 VSRDVRIDE 711 Score = 47.6 bits (111), Expect(2) = 8e-041 Identities = 29/103 (28%), Positives = 53/103 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L F++K+LG Q LG++++R + L + Q I+++L ++ + D K TP+ + Sbjct: 1025 LEKEFKVKNLGEVHQYLGLEVTRTEDS--LEIRQTEIIKRLLEKYHMQDCKSSKTPMEIN 1082 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLY 3840 F ++ +E VP+ I SL+ + V +RPD Y Sbjct: 1083 FNVNIPSPSDIIE-------VPFKELIGSLLYIAVNSRPDIAY 1118 Score = 40.6 bits (93), Expect = 3.4 Identities = 33/127 (25%), Positives = 59/127 (45%), Gaps = 2/127 (1%) Frame = -1 Query: 90172 KMLGKNAKAKCILVCGLGPDEFNRISSCTSAKQIWDTLQNSHEGTTQVRKFKIASLCSEY 89993 K K+AKA+ ++V L + S TSAK++ + L+ + RK +++L Sbjct: 51 KFKKKDAKARSLIVNCLSDKHLEYVRSATSAKEMIENLRKIFK-----RKSTLSALYVRK 105 Query: 89992 EAFKMKSGKS--LQDMITRFTTVINELISLGKVYTTEEQVDKVLRIFPRSWEIKVTAIRE 89819 + +K S L D F +I +L G +++V +L P S+ +TA+ Sbjct: 106 KLLTLKCDPSVELSDHFNNFDMLIRQLEETGSTVNEQDKVCHLLLTMPDSYNTTITAL-- 163 Query: 89818 AKDLTNMTL 89792 + TN+ L Sbjct: 164 --ETTNVEL 170 >gb|AAF24531.1|AC007534_12 (AC007534) F7F22.17 [Arabidopsis thaliana] Length = 1799 Score = 160 bits (401), Expect(2) = 7e-038 Identities = 162/576 (28%), Positives = 256/576 (44%), Gaps = 15/576 (2%) Frame = -1 Query: 39331 SWSEHELYLRIVLQTLRDQRLYAKFSKCEFWLKSVAF*GHVVSKEGIRVDPMKIEAICGW 39152 S+S L L VL + L + KC F +K GH +S++GI VD K+E + Sbjct: 1124 SFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQL 1183 Query: 39151 HRPTSVTEVHSFVGLVSYYRRFVEGFSTSA---THLNLQDVSFMWLVKCDMSFLKLKELI 38981 P +V ++ SF+G +YRRF++ FS A T L ++ F + C SF +K+ + Sbjct: 1184 QPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKDAL 1243 Query: 38980 TSAPILTLLVEGGGFTIYCDASGVGVDFVLM----KQGWFIDYVSRELKVHELNYPTRDL 38813 SAP++ F I CDAS V VL K+ I Y SR L + Y T + Sbjct: 1244 VSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEK 1303 Query: 38812 ELAVIVFALMIWRHYLYGVQYETYTDHMSLQDIMIQRDLNSR*CRWIELLKDYDLSILYH 38633 EL V+VFA +R YL G + YTDH +L+ + ++D R RWI LL+++D+ I+ Sbjct: 1304 ELLVVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDK 1363 Query: 38632 PGKKNMVAYSLSRKQ*VWVVYPSYVCGERPLALDIQFSANCMVRLDIFYSRCVLAYMGVQ 38453 G +N A LSR + E PL +D ++ ++ F +Y G + Sbjct: 1364 KGIENGAADHLSRMR-----------IEEPLLIDDSMPEEQLMVVEFFGK----SYSGKE 1408 Query: 38452 SSLYDRNRGWQFED*ALLSLRDQVLAGDGDQATLDFDGVLKFSGRISVPTVGDSIQLILS 38273 Q+ A +G+ D ++ IL Sbjct: 1409 F--------------------HQLNAVEGESPWRCVS--------------EDEVEGILL 1434 Query: 38272 EAHEFRYSIHLGTAK-MYRDLRQHYLWSGMR*DIADFVSRC-LCYQQVKVEHLRSGGAFK 38099 H Y H T K + + L+ + W M D +FVS+C C ++ + Sbjct: 1435 HCHGSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNEMPQNP 1494 Query: 38098 RLSISEWKWDRITMDFVAGLPQTSKGVDSIYVIVDQLTK--SAHFLPVQSLFSVVRLARI 37925 L + +D +DF+ P +S G I V VD ++K A P V++L + Sbjct: 1495 ILEVE--IFDVWGIDFMGPFP-SSYGNKYILVAVDYVSKWVEAIASPTNDAKVVLKLFKT 1551 Query: 37924 YIWEVVRFHGVPVSIISDRGSQFTS*FKTTFQDELGTRVDLSAAFHPQTDDQSEHTIQ-- 37751 I+ RF GVP +ISD G F + + G + ++ ++PQT Q E + + Sbjct: 1552 IIFP--RF-GVPRVVISDGGKHFINKVFENLLKKHGVKHKVATPYNPQTSGQVEISNREI 1608 Query: 37750 --VLEDMLHVCVLEFGGQ*DQFSPLAQFAYNSIFHSNIQMVLFVALYGRIC 37604 +LE + + ++ + D A +AY + F + I F LYG+ C Sbjct: 1609 KTILEKTVGITRKDWSAKLDD----ALWAYRTAFKTPIGTTPFNLLYGKSC 1655 Score = 134 bits (335), Expect(2) = 3e-046 Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 14/274 (5%) Frame = +2 Query: 56426 SIPPYRMAPAELREL-KAQLQELLGKGFIRPSA-----APWGALVLFVKKKDE------- 56566 SI P R L+E+ K ++ +LL G I P + + + +KDE Sbjct: 950 SIEPQRRLNPNLKEVVKKEILKLLDAGVIYPISDMHCVPKKDGMTVVKNEKDELIPTRTI 1009 Query: 56567 -SFRMCIEYRQLNKVTLKNKYLIPCIDD*FD*VQGACVFSKIDLTSGYQQLKIWATNVPK 56743 RMCI+YR+LN + K+ + +P ID + + + +D +G+ Q+ I + K Sbjct: 1010 TGHRMCIDYRKLNAASRKDHFPLPFIDQMLERLANHPYYCFLDGYNGFFQIPIHPNDQEK 1069 Query: 56744 TAF*TRCGHYEFLVKSFGLKNAPAAFMGLMNGIFKPYLELFVIVFIDDILIYSKSRKXXX 56923 T F G + + FGL NAPA F M IF +E V VF+DD +Y S Sbjct: 1070 TTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGPSFSSCL 1129 Query: 56924 XXXXXXXXXXXXKNLYAKFFKCEFCLASVSFLGHVVSKDGVMVDHSKIEAVKIWVKPTNV 57103 NL + KC F + LGH +S+ G+ VD K+E + P V Sbjct: 1130 LNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTV 1189 Query: 57104 SDVTSFVGLASYYRRFI*VFSSIALQLTNLTKQNVPFIWSGECEESFQ 57247 D+ SF+G A +YRRFI FS IA LT L + F + +C +SFQ Sbjct: 1190 KDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQ 1237 Score = 85.4 bits (208), Expect = 1e-013 Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Frame = +2 Query: 68375 VSKEDIMVDPKKIETIKDWIRPASVIQI*SFLGLAGYYRRSMISYPXXXXXXXXXXXX*L 68554 +S++ I VD K+E + P +V I SFLG AG+YRR + + L Sbjct: 1165 ISEKGIEVDKGKVEVMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTR-----L 1219 Query: 68555 SCGLTSVRL---VFKSSRLN*LLLEF*PY----QWRERVLLYIDASQIGLGCVLMQKGK- 68710 C T + KS + L P W + DAS +G VL QK Sbjct: 1220 LCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNWDYPFEIMCDASDYAVGAVLGQKIDK 1279 Query: 68711 ---VVAYASRQLKVHEKKYIIHDLELVTVVFALKIWMNYLYGVHFAVFTNHRSLQYIFNQ 68881 V+ YASR L + +Y + EL+ VVFA + + +YL G V+T+H +L++++ + Sbjct: 1280 KLHVIYYASRTLDDAQGRYATTEKELLVVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAK 1339 Query: 68882 RDLKLRKRIWLELLKDYDMTILYHPGKTNVVADALS 68989 +D K R W+ LL+++DM I+ G N AD LS Sbjct: 1340 KDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHLS 1375 Score = 80.4 bits (195), Expect(2) = 3e-046 Identities = 49/115 (42%), Positives = 69/115 (59%), Gaps = 4/115 (3%) Frame = +1 Query: 57307 FIVYCDVSYSGLGAVLM*E----RNVITYASRQLKVHEHNYPTHDLDLAAVVFALKQWRH 57474 F + CD S +GAVL + +VI YASR L + Y T + +L VVFA +++R Sbjct: 1258 FEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEKELLVVVFAFEKFRS 1317 Query: 57475 YLYGVKCEVYTDHRSLPYVFTQKDLNLRRRRWMELLKDNDITILYHLGKANVVADALSR 57651 YL G K VYTDH +L +++ +KD R RW+ LL++ D+ I+ G N AD LSR Sbjct: 1318 YLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHLSR 1376 Score = 44.1 bits (102), Expect = 0.30 Identities = 29/115 (25%), Positives = 54/115 (46%) Frame = +1 Query: 69640 KKLAKIYIREIVRLHGVSISIISDRGTKFMSHFWLSMHKELGTRVDLSTTFHPQTDSQSE 69819 K + K++ I GV +ISD G F++ + ++ K+ G + ++T ++PQT Q E Sbjct: 1543 KVVLKLFKTIIFPRFGVPRVVISDGGKHFINKVFENLLKKHGVKHKVATPYNPQTSGQVE 1602 Query: 69820 WIIQVLEDML*ACVIDFGNHWDQFLPLVEFAYNNSYHLSFEMAPFEALYGRGGYM 69984 + ++ +L V W L +AY ++ PF LYG+ ++ Sbjct: 1603 ISNREIKTILEKTVGITRKDWSAKLDDALWAYRTAFKTPIGTTPFNLLYGKSCHL 1657 Score = 43.4 bits (100), Expect = 0.51 Identities = 51/186 (27%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Frame = +1 Query: 68077 YHQLKLREEDISKTAFQTRYGHYEFLVMYFELTNAHATFMDLMN*AFRQYXXXXXXXXXX 68256 + Q+ + D KT F YG + + M F L NA ATF M F Sbjct: 1057 FFQIPIHPNDQEKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMD 1116 Query: 68257 XXXXXXCRKEEHEHHLRTVFGILKEKKLYTKFSKCEIWLSVQRRY-HGGSEK--D*DN*R 68427 +L V +E L + KC + H SEK + D + Sbjct: 1117 DFSVYGPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGK 1176 Query: 68428 LD*TCFSYSDLKFLRPCRLL--------STIYDFLSIASTLTRLT*KEVTFLWSDECEVS 68583 ++ K ++ R I DF IA LTRL KE F + D+C S Sbjct: 1177 VE-VMMQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKS 1235 Query: 68584 FQKLKT*LTTARILTLP 68634 FQ +K L +A ++ P Sbjct: 1236 FQTIKDALVSAPVVRAP 1252 Score = 26.6 bits (57), Expect(2) = 7e-038 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 39431 APSAFVDLMTRLFRT*LDSFVIIFMDDILV 39342 AP+ F MT +F ++ V +FMDD V Sbjct: 1091 APATFQRCMTSIFSDLIEEMVEVFMDDFSV 1120 >gb|AAG09097.1|AC009323_8 (AC009323) Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1486 Score = 168 bits (421), Expect(2) = 3e-039 Identities = 118/385 (30%), Positives = 185/385 (47%), Gaps = 4/385 (1%) Frame = -3 Query: 6173 VYLADNKALEIEGKGDVCIKTTLRNQRTLDDVRYIPGIKKNLISVGQFDSTGYAAVFGKG 5994 + L D + +G V + ++L L DV ++ G+ +LISV Q T Sbjct: 406 IKLPDGRFTTATKQGSVQLGSSL----DLQDVLFVDGLHCHLISVSQLTRTRRCIFQITD 461 Query: 5993 SWKIVKG---VIVVARGTNSGTLYTTLGCINMDVV-AESVSGSCLWHNRLGHMSAKGMKM 5826 IV+ ++++ G LY G V ++++ S LWH RLGH S+K + + Sbjct: 462 KVCIVQDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHL 521 Query: 5825 LVAKGALEGLKSFDMGLCESCVMGKQKRVSFTKTPREP*KVLLKMTHTDVWGPSPVSSLG 5646 L +FD CE C+ KQ R F + + ++ H D+WGP +S+ Sbjct: 522 LPFSDVTSS--TFDSKTCEICIQAKQTRDPFPLSSNKT-SFAFELVHCDLWGPYRTTSIC 578 Query: 5645 GSRFYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS 5466 GSR+++T + D+SR VW+Y L + K + A VE Q + +K +RSDNG E+ Sbjct: 579 GSRYFLTLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNIKMIRSDNGSEFIC- 637 Query: 5465 *FTAFCAAKGIRLMRAVPGKARQNGIDERMNKILNEHARSMRINCGMPKTFWANVVSTVA 5286 + F A KGI + G +QNG ER ++ + AR++R G+P FW+ T A Sbjct: 638 -LSDFFAQKGIIHETSCVGTPQQNGRVERKHRHILNVARALRFQSGLPIEFWSYCALTAA 696 Query: 5285 YLINRGPSVPLGFKILEEVWIRKELKYSHLRTFGCTTYVHVDPEKRNKLNVKAVKCYLIG 5106 YLINR P+ L K E+ + H+R FGC YVH +K ++ K +G Sbjct: 697 YLINRTPTPLLKGKTPFELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLG 756 Query: 5105 YGSNLFGYRFWDDKNRKILRHCDVTFDES 5019 Y G+R ++ + + DV F E+ Sbjct: 757 YPFAKKGWRVYNIETGVVSVSRDVVFRET 785 Score = 155 bits (387), Expect = 1e-034 Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Frame = -2 Query: 4809 YLLLIDEG-EPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWV 4633 Y+L I G EP +++EA+ ++D W+ A+ E+ SLE TW + DLP GK+AL KWV Sbjct: 967 YILAITSGNEPRNYNEAM-LDDH--WKGAVSHEIGSLENLGTWTVEDLPPGKKALGCKWV 1023 Query: 4632 FRIKT*PDGK-RRFKAHLVVKG*----ATDYAEIFSPVVKLTSIRILLIIVASENMHLEQ 4468 FR+K DG R KA LVV G DY E F+PV K+ ++R L V S + + Q Sbjct: 1024 FRLKYKSDGTLERHKARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQVVSLDWEVHQ 1083 Query: 4467 MDEKTVFLHGDLDKEIYMQQPKGFVVPGKEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTK 4288 MD FLHGDLD+E+YMQ P GF G + VC+L +SLYGLKQAPR W+ K S + Sbjct: 1084 MDVHNAFLHGDLDEEVYMQFPPGFRT-GDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKN 1142 Query: 4287 SEFCKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSM 4174 F + D + + +L+Y+DD++I G+++ Sbjct: 1143 YGFIQDISDYSLFIFHKNGVRLHVLVYVDDLIITGTTI 1180 Score = 139 bits (346), Expect(2) = 3e-046 Identities = 73/164 (44%), Positives = 102/164 (61%), Gaps = 9/164 (5%) Frame = +3 Query: 64980 VHTHQQNGEVERKHKHLLEVARALLYQSKLPARYWGECILTTTYLINRLTNSVLHNKNHF 65159 V T QQNG VERKH+H+L VARAL +QS LP +W C LT YLINR +L K F Sbjct: 654 VGTPQQNGRVERKHRHILNVARALRFQSGLPIEFWSYCALTAAYLINRTPTPLLKGKTPF 713 Query: 65160 QVLYNK*PAYSYLKVFGCLCF-PTLNSHKDKFEPRTTPHIFLGYPFNTNGYKVLDFSTKK 65336 +++YN+ P ++++FGC+C+ L DKF R+ IFLGYPF G++V + T Sbjct: 714 ELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLGYPFAKKGWRVYNIETGV 773 Query: 65337 IHVSRDVSFYENVFPFTLFEVDFS--------FSTTLEKLSINQNILHSTNST 65471 + VSRDV F E F F + +D S S+ LE++S+ + S+ +T Sbjct: 774 VSVSRDVVFRETEFHFPISVMDSSPSLDPVLVDSSELEEISMTPPVTPSSPAT 826 Score = 82.3 bits (200), Expect(2) = 6e-026 Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 1/130 (0%) Frame = -2 Query: 87468 LGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIEQ-VPIFCDNT 87292 LG +S ++KQN V+ S+AEAEY A A ++++WI++ L G+ + D+ Sbjct: 1353 LGGSPLSWKTQKQNVVSRSSAEAEYRAMAETVSEIIWIRELLPALGIPCTAPTTLHSDSL 1412 Query: 87291 SAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSLAREHFER 87112 SAI++ N V H RTKHV HF+RD + G I+ + Q+ADI T +L R+ F Sbjct: 1413 SAISLAANPVYHARTKHVRRDVHFIRDELVNGTIATKHVSTTSQLADILTKALGRKEFAD 1472 Query: 87111 NRLELGMMKIN 87079 +LG+ ++ Sbjct: 1473 FLAKLGICNLH 1483 Score = 76.1 bits (184), Expect(2) = 3e-046 Identities = 43/108 (39%), Positives = 62/108 (56%), Gaps = 4/108 (3%) Frame = +1 Query: 64600 LTKKTF----CVHCLSHGQINTIIFPIKNTTSSNRFFDLLRLDLWEPYHVLTHNGYKYFL 64767 +T TF C C+ Q FP+ + +S F +L+ DLW PY + G +YFL Sbjct: 527 VTSSTFDSKTCEICIQAKQTRDP-FPLSSNKTSFAF-ELVHCDLWGPYRTTSICGSRYFL 584 Query: 64768 MIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYNGLEFI 64923 +VDD+SR+ W LL K + +K+F++LV Q+ IK IR+ NG EFI Sbjct: 585 TLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNIKMIRSDNGSEFI 636 Score = 68.7 bits (165), Expect = 1e-008 Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 5/231 (2%) Frame = -2 Query: 88563 QQWYMDSACSRHMTGNKTLFLSLEEXXXXXXXXXXXXXXXXXXXXXXGRSDEHSIDKVYY 88384 + W +DS + HMTG+ ++ + + V + Sbjct: 376 ESWIIDSGATNHMTGSLAFLRNVCDMPPVLIKLPDGRFTTATKQGSVQLGSSLDLQDVLF 435 Query: 88383 VKGLIHNLLSISQLCDKENKVIFRSTGVEVINLNTQKLVLIG--KRDKHIYT---VDTST 88219 V GL +L+S+SQL + + IF+ T I + L+LIG + +Y V+T+ Sbjct: 436 VDGLHCHLISVSQLT-RTRRCIFQITDKVCIVQDRTTLMLIGAGRELNGLYFFRGVETAA 494 Query: 88218 IYDKKLVCLSVLEKDPLLWHKRLRHASQVQLNKLITKDLVIGLPKNKFKEDKVCEACTLG 88039 K + S L WH+RL H S L+ L D+ + + K CE C Sbjct: 495 AVTSKALPSSQL------WHQRLGHPSSKALHLLPFSDVT-----SSTFDSKTCEICIQA 543 Query: 88038 K*IKSSFKSKQMVSSTCSLELIHMDLCGPMRVQSRGEKIYVFVLVDDYTRNT*RYM 87871 K + F +S + EL+H DL GP R S Y LVDDY+R Y+ Sbjct: 544 KQTRDPFPLSSNKTSF-AFELVHCDLWGPYRTTSICGSRYFLTLVDDYSRAVWLYL 598 Score = 64.8 bits (155), Expect(2) = 6e-026 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 1/136 (0%) Frame = -3 Query: 87887 TPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKL-YRGMIGSL 87711 +P G ++ Q+KY +++ + K P+ KL G T++ L YR ++G + Sbjct: 1213 SPEGIYLCQRKYALDIITETGLLGVKPASFPLDQNHKLAF-ATGETIDDPLRYRRLVGRI 1271 Query: 87710 LYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLVGY 87531 +YL +RP++ + + + ++F NPK +H +A R++ YLK + G+ + L + Sbjct: 1272 IYLATTRPELSYVIHILSQFMHNPKPAHWEAALRVVRYLKSSPGQGILLRANTPLVLSAW 1331 Query: 87530 ADVDYVGYLVDRKSTTG 87480 D D+ +S TG Sbjct: 1332 CDSDFGACPHSDRSLTG 1348 Score = 44.9 bits (104), Expect(2) = 2e-006 Identities = 28/84 (33%), Positives = 38/84 (44%) Frame = +2 Query: 64007 PFFSYLPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSF 64186 P LP+G T+ G L SSL L +LFV +LISV L + + Sbjct: 403 PVLIKLPDGRFTTATKQGSVQLGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITDK 462 Query: 64187 SCLMQGPSMKSPLEIGRAHNGLYF 64258 C++Q + + GR NGLYF Sbjct: 463 VCIVQDRTTLMLIGAGRELNGLYF 486 Score = 43.4 bits (100), Expect = 0.51 Identities = 41/185 (22%), Positives = 76/185 (40%), Gaps = 3/185 (1%) Frame = -1 Query: 691 YSMWYRLMKLAMLGRNKMGLLDGSCPKDKFLGLECI-WERXXXXXXXXXXXXVEKGLLGS 515 Y W ++LA+ R K G DGS P+ + W +++ + S Sbjct: 47 YDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDWTANNALVVSWMKLTIDETVSTS 106 Query: 514 IMYATCA*DVWMNLYERFNKIDRS*TFNLYQEIANITQGTNSVFVYFSKSKGLWEKFEVV 335 + + + ++W ++ +RF + L E+A Q ++ Y+ + LW Sbjct: 107 MSHLDDSHELWTHIQKRFGVKNGQRVQRLKTELATCRQKGVAIETYYGRLSQLWRSLADY 166 Query: 334 VPTPSCECERSKEYVVNXXXXXXXXXLMGLNES-YI*ARSQILLMIPFPLVNQAY-LMVM 161 + + R + LMGL+ES Y +S +L +P P + +AY + Sbjct: 167 QQAKTMDDVRKER-----EEDKLHQFLMGLDESVYGAVKSALLSRVPLPSLEEAYNALTQ 221 Query: 160 SDESKNQS 137 +ESK+ S Sbjct: 222 DEESKSLS 229 Score = 41.0 bits (94), Expect = 2.6 Identities = 18/90 (20%), Positives = 41/90 (45%) Frame = +3 Query: 62775 ESAGSAIVPLVF*GTGYHSWGRGILQSQSVKNKTGFINGKIASPSPDSAAFALWQRCDDM 62954 ++ G+ I + G Y W + + + K GF +G I P F W + + Sbjct: 31 DNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDWTANNAL 90 Query: 62955 VTSWFFNSLPKDLADNLQYVNNAKALWDEL 63044 V SW ++ + ++ ++ +++++ LW + Sbjct: 91 VVSWMKLTIDETVSTSMSHLDDSHELWTHI 120 Score = 36.0 bits (81), Expect(2) = 2e-006 Identities = 17/31 (54%), Positives = 21/31 (66%) Frame = +3 Query: 63927 SWIIDSGASNHMTFDKTLLINIIPLPYPFLV 64019 SWIIDSGA+NHMT L N+ +P P L+ Sbjct: 377 SWIIDSGATNHMTGSLAFLRNVCDMP-PVLI 406 Score = 23.1 bits (48), Expect(2) = 3e-039 Identities = 8/11 (72%), Positives = 11/11 (99%) Frame = -2 Query: 6267 VESWILDSGAS 6235 +ESWI+DSGA+ Sbjct: 375 LESWIIDSGAT 385 >emb|CAB81200.1| (AL161518) putative retrotransposon polyprotein [Arabidopsis thaliana] Length = 1203 Score = 166 bits (417), Expect(2) = 5e-046 Identities = 91/218 (41%), Positives = 132/218 (59%), Gaps = 9/218 (4%) Frame = -2 Query: 4791 EGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*P 4612 E EP++F +A++ E KW A ++E+ +LE+N TW++ L GK + KWVF IK P Sbjct: 522 ETEPKAFTQAMKSE---KWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNP 578 Query: 4611 DGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 DG R+KA LV +G DY E FSPV K S+++LL + A+ L QMD F Sbjct: 579 DGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAF 638 Query: 4446 LHGDLDKEIYMQQPKGFVVPG----KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 LHG+LD+EIYM P+G+ P VC+L +SLYGLKQA RQWYK+ S + F Sbjct: 639 LHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANF 698 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVVCS 4138 ++ D + K S + +L+Y+DD++I + NL +++ S Sbjct: 699 IQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRS 745 Score = 83.9 bits (204), Expect(2) = 2e-030 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDN 87295 +LG+ LI+ SKKQ+ V+ S+ E+EY + A +++W++Q L D + + +FCDN Sbjct: 905 YLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDN 964 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 SA+++ N V H+RTKH++I H +RD ++ G++ Q+ADI T L Sbjct: 965 KSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPL 1018 Score = 78.0 bits (189), Expect(2) = 2e-030 Identities = 46/139 (33%), Positives = 69/139 (49%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 I + G + Q+KY + LL+ + K P+ P L E YR ++G Sbjct: 763 IARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVG 822 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 LLYL +RPDI F+V ++F + P + H+QA ++L YLKG G+ Y S L Sbjct: 823 RLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLN 882 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 G++D D+ R+S TG Sbjct: 883 GFSDADWGTCKDSRRSVTG 901 Score = 58.9 bits (140), Expect(2) = 2e-010 Identities = 33/80 (41%), Positives = 43/80 (53%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQ 64201 LPNG RV +T G C+ S+L LH +L V FKFNLISV LV F + C +Q Sbjct: 129 LPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQ 188 Query: 64202 GPSMKSPLEIGRAHNGLYFL 64261 + + G+ +N LY L Sbjct: 189 ELTRGLMIGRGKTYNNLYIL 208 Score = 47.6 bits (111), Expect(2) = 5e-046 Identities = 32/111 (28%), Positives = 58/111 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F++KDLGPA+ LG++I+ RS+ +++ Q Y + +L ++ KP + P+ + Sbjct: 743 LRSEFKIKDLGPARFFLGLEIA--RSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPN 800 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSIYSL 3816 L+KE ++ LV L +C TRPD F++++L Sbjct: 801 LHLTKEMGTLLPNATSYRELVGRLLYLC-------ITRPD---ITFAVHTL 841 Score = 44.5 bits (103), Expect = 0.23 Identities = 26/86 (30%), Positives = 44/86 (50%) Frame = -3 Query: 5636 FYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FT 5457 +++T + D +R WVY +K+ S+V F + + Q + K+K +RSDN E FT Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELA---FT 308 Query: 5456 AFCAAKGIRLMRAVPGKARQNGIDER 5379 F +G+ + +QN + ER Sbjct: 309 KFVKEQGMIHQFSCAYTPQQNSVVER 334 Score = 43.8 bits (101), Expect(2) = 0.006 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = +1 Query: 64759 YFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYN 64908 YFL +VDD +R+TW ++ KS FV L+ Q+ IK+IR+ N Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDN 301 Score = 35.6 bits (80), Expect(2) = 2e-010 Identities = 15/29 (51%), Positives = 23/29 (78%) Frame = +3 Query: 63909 HVLSNNSWIIDSGASNHMTFDKTLLINII 63995 +VLS+++WIIDSGAS+H+ D T+ +I Sbjct: 92 NVLSSDAWIIDSGASSHVCSDLTMFRELI 120 Score = 25.1 bits (53), Expect(2) = 0.006 Identities = 9/16 (56%), Positives = 12/16 (74%) Frame = +2 Query: 64946 LKKKGKIHQRSCPYAP 64993 +K++G IHQ SC Y P Sbjct: 311 VKEQGMIHQFSCAYTP 326 >emb|CAB40067.1| (AL049525) putative retrotransposon polyprotein [Arabidopsis thaliana] Length = 1203 Score = 166 bits (417), Expect(2) = 5e-046 Identities = 91/218 (41%), Positives = 132/218 (59%), Gaps = 9/218 (4%) Frame = -2 Query: 4791 EGEPESFDEALQVEDSIKWELAMDDEMRSLEKNDTWVLTDLPAGKRALLNKWVFRIKT*P 4612 E EP++F +A++ E KW A ++E+ +LE+N TW++ L GK + KWVF IK P Sbjct: 522 ETEPKAFTQAMKSE---KWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNP 578 Query: 4611 DGK-RRFKAHLVVKG*AT----DYAEIFSPVVKLTSIRILLIIVASENMHLEQMDEKTVF 4447 DG R+KA LV +G DY E FSPV K S+++LL + A+ L QMD F Sbjct: 579 DGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAF 638 Query: 4446 LHGDLDKEIYMQQPKGFVVPG----KEHMVCKLTRSLYGLKQAPRQWYKKFDSFMTKSEF 4279 LHG+LD+EIYM P+G+ P VC+L +SLYGLKQA RQWYK+ S + F Sbjct: 639 LHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANF 698 Query: 4278 CKAEKDPCCYFKKYTNSYVFLLLYLDDMLIEGSSMRENNNLDKVVCS 4138 ++ D + K S + +L+Y+DD++I + NL +++ S Sbjct: 699 IQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRS 745 Score = 83.9 bits (204), Expect(2) = 2e-030 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Frame = -2 Query: 87471 FLGSCLIS*GSKKQNSVALSTAEAEYVAAALCCAQVLWIKQQLSDFGLKIE-QVPIFCDN 87295 +LG+ LI+ SKKQ+ V+ S+ E+EY + A +++W++Q L D + + +FCDN Sbjct: 905 YLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDN 964 Query: 87294 TSAINIVKNLVQHKRTKHVDIRHHFLRDNVEKGQISMNFCTMEEQIADIFTMSL 87133 SA+++ N V H+RTKH++I H +RD ++ G++ Q+ADI T L Sbjct: 965 KSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPL 1018 Score = 78.0 bits (189), Expect(2) = 2e-030 Identities = 46/139 (33%), Positives = 69/139 (49%) Frame = -3 Query: 87896 ILGTPRGTWIHQQKYVKELLKRFKMDDAKQIDTPIAPATKLDLEGIGSTVEQKLYRGMIG 87717 I + G + Q+KY + LL+ + K P+ P L E YR ++G Sbjct: 763 IARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVG 822 Query: 87716 SLLYLTASRPDIVFSVGLCARFQTNPKESHIQAVKRIL*YLKGTSDLGVWYLKGSNFDLV 87537 LLYL +RPDI F+V ++F + P + H+QA ++L YLKG G+ Y S L Sbjct: 823 RLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLN 882 Query: 87536 GYADVDYVGYLVDRKSTTG 87480 G++D D+ R+S TG Sbjct: 883 GFSDADWGTCKDSRRSVTG 901 Score = 58.9 bits (140), Expect(2) = 2e-010 Identities = 33/80 (41%), Positives = 43/80 (53%) Frame = +2 Query: 64022 LPNGYRVKVTEIGDACLNSSLTLHKLLFVHSFKFNLISVHSLVSHDKRVISFNSFSCLMQ 64201 LPNG RV +T G C+ S+L LH +L V FKFNLISV LV F + C +Q Sbjct: 129 LPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQ 188 Query: 64202 GPSMKSPLEIGRAHNGLYFL 64261 + + G+ +N LY L Sbjct: 189 ELTRGLMIGRGKTYNNLYIL 208 Score = 47.6 bits (111), Expect(2) = 5e-046 Identities = 32/111 (28%), Positives = 58/111 (51%) Frame = -3 Query: 4148 LSAAFEMKDLGPAKQILGMKISRDRSACTLNLSQELYIEKVLSRFRVNDAKPRTTPLANH 3969 L + F++KDLGPA+ LG++I+ RS+ +++ Q Y + +L ++ KP + P+ + Sbjct: 743 LRSEFKIKDLGPARFFLGLEIA--RSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPN 800 Query: 3968 FKLSKEQSPKTVEERNHMALVPYALAICSLVSVMVCTRPDRLYYLFSIYSL 3816 L+KE ++ LV L +C TRPD F++++L Sbjct: 801 LHLTKEMGTLLPNATSYRELVGRLLYLC-------ITRPD---ITFAVHTL 841 Score = 44.5 bits (103), Expect = 0.23 Identities = 26/86 (30%), Positives = 44/86 (50%) Frame = -3 Query: 5636 FYVTFIYDFSRKVWVYFLKHNSDVFATFKKWKAEVENQSSLKVKRLRSDNGGEYDKS*FT 5457 +++T + D +R WVY +K+ S+V F + + Q + K+K +RSDN E FT Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELA---FT 308 Query: 5456 AFCAAKGIRLMRAVPGKARQNGIDER 5379 F +G+ + +QN + ER Sbjct: 309 KFVKEQGMIHQFSCAYTPQQNSVVER 334 Score = 43.8 bits (101), Expect(2) = 0.006 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = +1 Query: 64759 YFLMIVDDFSRSTWTQLLTCKSNTLQTIKSFVSLVGNQFRVTIKSIRTYN 64908 YFL +VDD +R+TW ++ KS FV L+ Q+ IK+IR+ N Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDN 301 Score = 35.6 bits (80), Expect(2) = 2e-010 Identities = 15/29 (51%), Positives = 23/29 (78%) Frame = +3 Query: 63909 HVLSNNSWIIDSGASNHMTFDKTLLINII 63995 +VLS+++WIIDSGAS+H+ D T+ +I Sbjct: 92 NVLSSDAWIIDSGASSHVCSDLTMFRELI 120 Score = 25.1 bits (53), Expect(2) = 0.006 Identities = 9/16 (56%), Positives = 12/16 (74%) Frame = +2 Query: 64946 LKKKGKIHQRSCPYAP 64993 +K++G IHQ SC Y P Sbjct: 311 VKEQGMIHQFSCAYTP 326 Database: h:\users\rv19\blast_databases\nr Posted date: Oct 27, 2000 11:02 AM Number of letters in database: 197,985,706 Number of sequences in database: 635,529 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2076779014 Number of Sequences: 635529 Number of extensions: 667829174 Number of successful extensions: 1509680 Number of sequences better than 10.0: 2662 Number of HSP's better than 10.0 without gapping: 1335 Number of HSP's successfully gapped in prelim test: 828 Number of HSP's that attempted gapping in prelim test: 1487066 Number of HSP's gapped (non-prelim): 19984 length of query: 33603 length of database: 197,985,706 effective HSP length: 67 effective length of query: 33535 effective length of database: 155,405,263 effective search space: 5211515494705 effective search space used: 5211515494705 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 89 (39.1 bits)