BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Tomato Genome proteins (ITAG release 4.0)
           34,075 sequences; 11,664,535 total letters



Query= Untitled_sequence

Length=218
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc03g117020.4.1unnamed protein product                             329     3e-116


>Solyc03g117020.4.1 unnamed protein product
Length=215

 Score = 329 bits (844),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 152/200 (76%), Positives = 174/200 (87%), Gaps = 2/200 (1%)

Query  19   DSGYTSASAAASGKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVD  78
            DS Y S +  ++  EGV+ITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGV D
Sbjct  17   DSDYISTTPVSAASEGVQITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVDD  76

Query  79   SNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPISGNLEVSCFGDDT  138
            +NSYW V+     + KQGD +KSG+ IRLQH+KTR+WLHSHLHASPISGN+EVSCFGDD 
Sbjct  77   ANSYWAVRST--DSSKQGDPIKSGSIIRLQHIKTRRWLHSHLHASPISGNMEVSCFGDDK  134

Query  139  NSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKK  198
             SDTGD+W+L IEGSGKTW+QDQR+RLQH+DT GYLHSHDKKY RIAGGQQEVCG++EK+
Sbjct  135  ESDTGDYWRLEIEGSGKTWRQDQRIRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVKEKR  194

Query  199  ADNIWLAAEGVYLPLNESSK  218
             DN+WLAAEGVY P+ E SK
Sbjct  195  PDNVWLAAEGVYFPVTEKSK  214



Lambda      K        H        a         alpha
   0.315    0.132    0.405    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1049224140


  Database: Tomato Genome proteins (ITAG release 4.0)
    Posted date:  Mar 21, 2024  4:18 PM
  Number of letters in database: 11,664,535
  Number of sequences in database:  34,075



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40