BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Solyc01g100830.1.1 Length=957 Score E Sequences producing significant alignments: (Bits) Value Solyc01g100830.1galactinol synthase 1 gols1 1768 0.0 Solyc02g084980.2Galactinol synthase (AHRD V1 ***- C7G304_SOLLC); ... 165 6e-40 Solyc02g062590.2Galactinol synthase (AHRD V1 ***- C7G304_SOLLC); ... 165 6e-40 Solyc01g079170.2Galactinol synthase (AHRD V1 ***- D6QSF5_BRANA); ... 108 1e-22 >Solyc01g100830.1 galactinol synthase 1 gols1 Length=957 Score = 1768 bits (957), Expect = 0.0 Identities = 957/957 (100%), Gaps = 0/957 (0%) Strand=Plus/Plus Query 1 ATGGCTCCAGAATTTGAAAGTGGAACAAAAATGGCTACTACTATTCAAAAATCATCATGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTCCAGAATTTGAAAGTGGAACAAAAATGGCTACTACTATTCAAAAATCATCATGT 60 Query 61 GCTTATGTGACTTTCTTAGCTGGTAATGGTGATTATGTGAAAGGTGTGGTTGGTTTAGCG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCTTATGTGACTTTCTTAGCTGGTAATGGTGATTATGTGAAAGGTGTGGTTGGTTTAGCG 120 Query 121 AAGGGATTGATAAAAGCTAAATCTATGTATCCTTTGGTTGTGGCAATTTTACCTGATGTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAGGGATTGATAAAAGCTAAATCTATGTATCCTTTGGTTGTGGCAATTTTACCTGATGTG 180 Query 181 CCTGAGGAACACAGGATGATATTGACGAGGCACGGTTGCATAGTGAAGGAGATAGAGCCA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CCTGAGGAACACAGGATGATATTGACGAGGCACGGTTGCATAGTGAAGGAGATAGAGCCA 240 Query 241 CTAGCTCCTTCATTGCAATCGTTGGATAAGTATGCACGATCTTATTACGTGCTTAACTAC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTAGCTCCTTCATTGCAATCGTTGGATAAGTATGCACGATCTTATTACGTGCTTAACTAC 300 Query 301 TCCAAACTTCGGATTTGGCAGTTTGTGGAGTACAGTAAGATGGTGTATTTGGATGGAGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCCAAACTTCGGATTTGGCAGTTTGTGGAGTACAGTAAGATGGTGTATTTGGATGGAGAT 360 Query 361 ATGCAAGTTTTTGAGAATATAGACCATCTATTTGAGCTGCCTGATAAGTATTTATACGCG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATGCAAGTTTTTGAGAATATAGACCATCTATTTGAGCTGCCTGATAAGTATTTATACGCG 420 Query 421 GTGGCGGACTGCATATGCGATATGTATGGGGAGCCATGTGATGAGGTTCTGCCGTGGCCC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTGGCGGACTGCATATGCGATATGTATGGGGAGCCATGTGATGAGGTTCTGCCGTGGCCC 480 Query 481 AAAGAGTTGGGGCCAAGGCCATCTGTTTACTTCAATGCAGGCATGTTTGTCTTTCAGCCA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 AAAGAGTTGGGGCCAAGGCCATCTGTTTACTTCAATGCAGGCATGTTTGTCTTTCAGCCA 540 Query 541 AATCCGTCTGTCTATGTTCGTCTCTTGAACACACTCAAAGTTACCCCACCCACCCAATTT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AATCCGTCTGTCTATGTTCGTCTCTTGAACACACTCAAAGTTACCCCACCCACCCAATTT 600 Query 601 GCTGAACAGGACTTTCTGAACATGTACTTTAAAGACGTGTACAAGCCAATTCCTTATACA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GCTGAACAGGACTTTCTGAACATGTACTTTAAAGACGTGTACAAGCCAATTCCTTATACA 660 Query 661 TACAATATGTTGCTGGCCATGCTATGGCGCCACCCGGAGAAAATAGAGGTGAACAAGGCG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TACAATATGTTGCTGGCCATGCTATGGCGCCACCCGGAGAAAATAGAGGTGAACAAGGCG 720 Query 721 AAAGCAGTTCACTACTGTTCTCCAGGGGCTAAACCGTGGAAATACACTGGGAAGGAAGAA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AAAGCAGTTCACTACTGTTCTCCAGGGGCTAAACCGTGGAAATACACTGGGAAGGAAGAA 780 Query 781 CATATGGATCGAGAGGATATAAAAATGCTAGTGAAGAAATGGTGGGACATTTATAATGAC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 CATATGGATCGAGAGGATATAAAAATGCTAGTGAAGAAATGGTGGGACATTTATAATGAC 840 Query 841 ACCACACTGGATCACAAGGCGCAGGGTTCCACAGTTGAAGCAAACAGATTAAGGGGAGCA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 ACCACACTGGATCACAAGGCGCAGGGTTCCACAGTTGAAGCAAACAGATTAAGGGGAGCA 900 Query 901 GCCTTTTCGGATACGAACATAAGTGCTTTATATATTACTAGCCCATCAGCTGCTTAA 957 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 GCCTTTTCGGATACGAACATAAGTGCTTTATATATTACTAGCCCATCAGCTGCTTAA 957 >Solyc02g084980.2 Galactinol synthase (AHRD V1 ***- C7G304_SOLLC); contains Interpro domain(s) IPR002495 Glycosyl transferase, family 8 Length=1434 Score = 165 bits (89), Expect = 6e-40 Identities = 275/365 (75%), Gaps = 12/365 (3%) Strand=Plus/Plus Query 482 AAGAGTTGGGGCCAAGGCCATCTGTTTACTTCAATGCAGGCATGTTTGTCTTTCAGCCAA 541 |||| ||||| || | |||||| | || || ||||| ||||||||||| | | |||||| Sbjct 659 AAGACTTGGGCCCTAAGCCATCACTCTATTTTAATGCTGGCATGTTTGTGTATGAGCCAA 718 Query 542 ATCCGTCT-GTC-TATGTTCGTCTCTTGAACACACTCAAAGTTACCCCACCCACCCAATT 599 || ||| | |||| | ||||||||| ||||||||||||||||| || |||| ||| Sbjct 719 GTC--TCTCCACTTATGATGATCTCTTGAAAACACTCAAAGTTACCCCTCCTACCCCATT 776 Query 600 TGCTGAACAGGACTTTCTGAACATGTACTTTAAAGACGTGTACAAGCCAATTCCTTATAC 659 |||||||||||| ||| |||||||||| || | ||| || |||||||||||||| | || Sbjct 777 TGCTGAACAGGATTTTTTGAACATGTATTTCAGAGATGTCTACAAGCCAATTCCG-A-AC 834 Query 660 -AT-ACAA-TATGTTGCTGGCCATGCTATGGCGCCACCCGGAGAAAATAGAGGT-GAACA 715 || | || | ||| | || ||| | ||||| ||||| ||||| | || | || | Sbjct 835 GATTATAACTTAGTTT-TAGCTATGTTGTGGCGTCACCCTGAGAATGTGGATCTTGAGAA 893 Query 716 AGGCGAAAGCAGTTCACTACTGTTCTCCAGGGGCTAAACCGTGGAAATACACTGGGAAGG 775 || |||| |||||||||||| | | ||| | || || |||| |||||||| |||| Sbjct 894 AGTA-AAAGTTGTTCACTACTGTGCGGCGGGGTCGAAGCCATGGAGGTACACTGGCAAGG 952 Query 776 AAGAACATATGGATCGAGAGGATATAAAAATGCTAGTGAAGAAATGGTGGGACATTTATA 835 |||| | ||||| |||| || || || ||||| | || ||||||||||| |||||| Sbjct 953 AAGAGAACATGGACAGAGAAGACATTAAGATGCTGATAAAAAAATGGTGGGATATTTATG 1012 Query 836 ATGAC 840 ||||| Sbjct 1013 ATGAC 1017 Score = 95.3 bits (51), Expect = 8e-19 Identities = 252/350 (72%), Gaps = 9/350 (3%) Strand=Plus/Plus Query 59 GTGCTTATGTGACTTTCTTAGCTGGTAATGGTGATTATGTGAAAGGTGTGGTTGGTTTAG 118 |||| ||||| || || |||||||| |||||||||||| |||||| || |||||||| | Sbjct 206 GTGCCTATGTTACATTTTTAGCTGGAAATGGTGATTATTGGAAAGGCGTTGTTGGTTTGG 265 Query 119 CGAAGGGATTGATAAAAGCTAAATCTATGTATCCTTTGGTTGTGGCAATTTTACCTGATG 178 || || ||| ||| || ||||| ||||| | |||||||| ||| ||||||| Sbjct 266 TTAAAGGTTTGCGAAAGGCGAAATCCGCTTATCCACTTGTTGTGGCTTGTTTGCCTGATG 325 Query 179 TGCCTGAGGAACACAGGATG-ATATTGACGAGGCACGGTTGCATAGT-GAAGGAGATAGA 236 | || |||||||| || | ||| | | | || |||||||| || | ||||| || Sbjct 326 TCCCGGAGGAACA-TCGACGTATACTCATTAACCAAGGTTGCATCGTTCGA-GAGATCGA 383 Query 237 GCCACTAGCTCCTTCATTGCAATCGTTGGATAAGTATGC-ACGATCTTATTACGTGCTTA 295 ||| | |||| | | ||||| | | | ||| | | ||||||| || | | Sbjct 384 GCCTGTTTATCCT-CCTCACAATC--AAACTCAATTTGCTATG-GCTTATTATGTTATCA 439 Query 296 ACTACTCCAAACTTCGGATTTGGCAGTTTGTGGAGTACAGTAAGATGGTGTATTTGGATG 355 |||| || || ||||| |||||| ||||||||||||| || |||||| | || ||||| | Sbjct 440 ACTATTCAAAGCTTCGTATTTGGGAGTTTGTGGAGTATAGCAAGATGATATACTTGGACG 499 Query 356 GAGATATGCAAGTTTTTGAGAATATAGACCATCTATTTGAGCTGCCTGAT 405 | ||||| || || ||||| || |||||||| | ||||| |||| ||| Sbjct 500 GTGATATTCAGGTGTTTGATAACATAGACCACTTGTTTGACTTGCCAGAT 549 >Solyc02g062590.2 Galactinol synthase (AHRD V1 ***- C7G304_SOLLC); contains Interpro domain(s) IPR002495 Glycosyl transferase, family 8 Length=1246 Score = 165 bits (89), Expect = 6e-40 Identities = 258/339 (76%), Gaps = 14/339 (4%) Strand=Plus/Plus Query 508 TACTTCAATGCAGGCATGTTTGTCTTTCAGCCAA--ATCCGT-CTGTCTATGTTCGTCTC 564 || |||||||||||||||||||| ||| |||||| ||| | || | || | || Sbjct 633 TATTTCAATGCAGGCATGTTTGTATTTGAGCCAAGTCTCCTTACTTACCAT-AAC--CTT 689 Query 565 TTGAACACACTCAAAGTTACCCCACCCACCCAATTTGCTGAACAGGACTTTCTGAACATG 624 |||| |||||||| ||||| || ||| |||||||||||||| || |||||||| Sbjct 690 TTGAGTTTCCTCAAAGTAACCCCTCCTACCTCTTTTGCTGAACAGGATTTATTGAACATG 749 Query 625 TACTTTAAAGACGTGTACAAGCCAATTCCTTATACA--TACAA-TATGTTGCTGGCCATG 681 | ||| || ||| | |||||||||||||| | ||| ||||| | ||| |||| ||| Sbjct 750 TTCTTCAAGGACATTTACAAGCCAATTCCA-A-ACAAGTACAACTTAGTTT-TGGCTATG 806 Query 682 CTATGGCGCCACCCGGAGAAAATAGAGGTGAACAAGGCGAAAGCAGTTCACTACTGTTCT 741 | ||||| || || ||||| ||||||| | |||| ||| | ||||| |||||| | Sbjct 807 TTGTGGCGTCATCCAGAGAATGTAGAGGTTGATAAGGTGAACGTTGTTCATTACTGTGCA 866 Query 742 CCAGGGGCTAAACCGTGGAAATACACTGGGA-AGGAAGAACATATGGATCGAGAGGATAT 800 |||| |||||||||||| |||||| |||| ||||||| | |||||| |||| ||||| Sbjct 867 GCAGGATCTAAACCGTGGAGATACAC-GGGAGAGGAAGAGAACATGGATAGAGATGATAT 925 Query 801 AAAAATGCTAGTGAAGAAATGGTGGGACATTTATAATGA 839 ||| ||||||||||| |||||| ||| || |||||||| Sbjct 926 AAAGATGCTAGTGAAAAAATGGACGGAGATATATAATGA 964 Score = 130 bits (70), Expect = 2e-29 Identities = 252/340 (74%), Gaps = 11/340 (3%) Strand=Plus/Plus Query 60 TGCTTATGTGACTTTCTTAGCTGGTAATGGTGATTATGTGAAAGGTGTGGTTGGTTTAGC 119 ||| |||||||| || || || ||||||||||| ||||| |||||||| ||||||||||| Sbjct 152 TGCCTATGTGACATTTTTGGCAGGTAATGGTGACTATGTAAAAGGTGTTGTTGGTTTAGC 211 Query 120 GAAGGGATTGATAAAAGCT-AAATCTATGTATCCTTTGGTTGTGGCAATTTTACCTGATG 178 || || |||| ||||| | |||||| ||||||| | || |||| | || ||||||| Sbjct 212 TAAAGGGTTGA-AAAAGGTAAAATCTGCGTATCCTCTAGTAATGGCGGTGTTGCCTGATG 270 Query 179 TGCCTGAGGAACACAGGATGATATTGACGAGGCACGGTTGCATAGTGAAGGAGATAGAGC 238 | || || ||| | | |||||| | || ||||| ||||| | |||| || | Sbjct 271 TACCAGAAGAATATCGCCACTTATTGATCAATCAGGGTTGTATAGTTCGGAAGATCGAAC 330 Query 239 CACTAGCTCCTTCATTGCAATCGTTGGA-TAAGTATGC-ACGATCTTATTACGTGCTTAA 296 | | |||| || | || | || | ||| ||| | | |||| || || | || Sbjct 331 CGGTTTATCCTCCA--G-AA-AATCAGACTCAGTTTGCTATG-GCTTACTATGTCATCAA 385 Query 297 CTACTCCAAACTTCGGATTTGGCAGTTTGTGGAGTA-CAGTAAGATGGTGTATTTGGATG 355 |||||| ||||| || || ||| ||||||||||||| || |||||| | || || |||| Sbjct 386 CTACTCTAAACTCCGCATCTGGGAGTTTGTGGAGTATCA-AAAGATGATATACTTAGATG 444 Query 356 GAGATATGCAAGTTTTTGAGAATATAGACCATCTATTTGA 395 ||||||| |||||||||||||| ||||||||| ||||||| Sbjct 445 GAGATATCCAAGTTTTTGAGAACATAGACCATTTATTTGA 484 >Solyc01g079170.2 Galactinol synthase (AHRD V1 ***- D6QSF5_BRANA); contains Interpro domain(s) IPR002495 Glycosyl transferase, family 8 Length=1567 Score = 108 bits (58), Expect = 1e-22 Identities = 213/287 (74%), Gaps = 14/287 (5%) Strand=Plus/Plus Query 561 TCTCTTGAACACACT-CAAAGTTACCCCACCCACCCAATTTGCTGAACAGGACTTTCTGA 619 ||||||||| | ||| |||| | ||||| || || | ||||| || ||||| || |||| Sbjct 795 TCTCTTGAAGAAACTTCAAA-TCACCCCTCCTACTCCTTTTGCAGAGCAGGATTTCCTGA 853 Query 620 ACATGTACTTTAAAG-ACGTGTACAAGCCAATTCCT-TATACATACAAT-ATGTTGCTGG 676 | ||||| ||| ||| || | |||| || || ||| || | |||||| |||| || | Sbjct 854 ATATGTA-TTTCAAGAACATCTACAGACCTATACCTCTAGTC-TACAATCTTGTT-CTAG 910 Query 677 CCATGCTATGGCGCCACCCGGAGAAAATAGAGGTGAACAAGGCGAAAGCAGTTCACTACT 736 | ||| ||||||| || || ||||| | ||| | | || | ||||| || || ||| Sbjct 911 CAATGTTATGGCGTCATCCCGAGAATGTTGAGCTTGATAAAGTGAAAGTTGT--AC-ACT 967 Query 737 GTTCTCCAG-GGGCT-AAA-CCGTGGAAATACACTGGGAAGGAAGAACATATGGATCGAG 793 || | ||| ||| | ||| ||||||| ||||| ||||| ||||| | ||||| | | Sbjct 968 ATTGTGCAGCGGGATCAAAGCCGTGGAGGTACACCGGGAAAGAAGAGAACATGGAAAGGG 1027 Query 794 AGGATATAAAAATGCTAGTGAAGAAATGGTGGGACATTTATAATGAC 840 | ||||||||| | || ||||||||||||||||||||||| || ||| Sbjct 1028 AAGATATAAAATTACTGGTGAAGAAATGGTGGGACATTTACAACGAC 1074 Score = 71.3 bits (38), Expect = 1e-11 Identities = 75/93 (81%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 72 TTTCTTAGCTGGTAATGGTGATTATGTGAAAGGTGTGGTTGGTTTAGCGAAGGGATTGAT 131 ||| || || || |||||||||||||||||||||||| |||| ||||| || || |||| Sbjct 274 TTT-TTGGCGGGAAATGGTGATTATGTGAAAGGTGTGATTGGATTAGCAAAAGGTTTGAG 332 Query 132 AAAAGCTAAATCTATGTATCCTTTGGTTGTGGC 164 || | ||||| ||||||| |||||||||| Sbjct 333 GAAGGTCAAATCGGTGTATCCGCTGGTTGTGGC 365 Score = 71.3 bits (38), Expect = 1e-11 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 281 CTTATTACGTGCTTAACTACTCCAAACTTCGGATTTGGCAGTTTGTGGAGTACAGTAAGA 340 |||||||||| | ||||||||||| ||||| |||||| |||||||||| |||| ||| Sbjct 479 CTTATTACGTCATCAACTACTCCAAGCTTCGTATTTGGGAGTTTGTGGAATACAAGAAGT 538 Query 341 TGGTGTATTTGGATGGAGATATGCAAGTTTTTGAGAATATAGACCATCTATTTGAGCTGC 400 || | || | ||||| || || || || | ||| || ||||| ||| | ||||| ||| Sbjct 539 TGATCTACCTAGATGGTGACATTCAGGTGTATGACAACATAGATCATTTGTTTGATTTGC 598 Query 401 CTGAT 405 | ||| Sbjct 599 CAGAT 603 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38317728876 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5