BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato Genome cDNA (ITAG release 2.40)
           34,725 sequences; 41,981,568 total letters



Query= Untitled_sequence

Length=636
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc07g041720.1Oxalate oxidase-like germin 171 (AHRD V1 **** Q9F...  1175    0.0  
Solyc03g123410.1Oxalate oxidase-like germin 171 (AHRD V1 **** Q9F...  121     9e-27


>Solyc07g041720.1 Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); 
contains Interpro domain(s)  IPR014710  RmlC-like jelly roll 
fold 
Length=636

 Score = 1175 bits (636),  Expect = 0.0
 Identities = 636/636 (100%), Gaps = 0/636 (0%)
 Strand=Plus/Plus

Query  1    ATGTATTTTCAAGCCTTGTTCCTCTTCTCTCTTGTCATCATCTCCTCCTCTCAAGCCGCG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGTATTTTCAAGCCTTGTTCCTCTTCTCTCTTGTCATCATCTCCTCCTCTCAAGCCGCG  60

Query  61   GTCCTCGATTTCTGTGTTGGTGACTTGTCCTTACCCGATGGTCCCGGTGGCTATGCTTGC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   GTCCTCGATTTCTGTGTTGGTGACTTGTCCTTACCCGATGGTCCCGGTGGCTATGCTTGC  120

Query  121  AAGAAACCATCAAAAGTAACTGCTGATGACTTTGTGTTCTCAGGGTTAGCTGCCACAGGA  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AAGAAACCATCAAAAGTAACTGCTGATGACTTTGTGTTCTCAGGGTTAGCTGCCACAGGA  180

Query  181  AAGATAATCCCTCTCATTAAAGCGGCGGTGACTCCTGCTTTTGCTCCTCAATTTCCAGGT  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  AAGATAATCCCTCTCATTAAAGCGGCGGTGACTCCTGCTTTTGCTCCTCAATTTCCAGGT  240

Query  241  GTCAATGGGCTTGGAATCTCAATGGCTAGGCTTGATTTAGCTATAAGTGGTGTTATCCCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  GTCAATGGGCTTGGAATCTCAATGGCTAGGCTTGATTTAGCTATAAGTGGTGTTATCCCA  300

Query  301  ATGCACACACACCCCGGAGCATCGGAGGTGCTTTATGTTGTCCAAGGAGAAATATGCGCG  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  ATGCACACACACCCCGGAGCATCGGAGGTGCTTTATGTTGTCCAAGGAGAAATATGCGCG  360

Query  361  GGATTTATTTCTTCCTCGGACAACAAAGTGTTTTTTAAAACCCTAAAACAAGGAGATATT  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GGATTTATTTCTTCCTCGGACAACAAAGTGTTTTTTAAAACCCTAAAACAAGGAGATATT  420

Query  421  ATGGTATTTCCACAAGGGTTACTGCATTTTCAGATTAATTCAGGGAAAACTTCAGCTTTG  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  ATGGTATTTCCACAAGGGTTACTGCATTTTCAGATTAATTCAGGGAAAACTTCAGCTTTG  480

Query  481  GCTATTATTTCTTTCAGTAGCCCAACACCAGGGCTTCAAATTACTGATTTTGCTTTGTTT  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  GCTATTATTTCTTTCAGTAGCCCAACACCAGGGCTTCAAATTACTGATTTTGCTTTGTTT  540

Query  541  GCTAATGATTTGCCTACTGAACTTGTCGCAGCCACCACATTCCTTGATGCTGCTTTAATC  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  GCTAATGATTTGCCTACTGAACTTGTCGCAGCCACCACATTCCTTGATGCTGCTTTAATC  600

Query  601  AAGAAGTTGAAGGGTGTTCTTGGAGGAACCAACTAA  636
            ||||||||||||||||||||||||||||||||||||
Sbjct  601  AAGAAGTTGAAGGGTGTTCTTGGAGGAACCAACTAA  636


>Solyc03g123410.1 Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); 
contains Interpro domain(s)  IPR014710  RmlC-like jelly roll 
fold 
Length=627

 Score = 121 bits (65),  Expect = 9e-27
 Identities = 267/362 (74%), Gaps = 23/362 (6%)
 Strand=Plus/Plus

Query  285  AAGTGGTGTTATCCCAATGCACACACACCCCGGAGCATCGGAGGTGCTTTA--TGTTGTC  342
            ||||||||| |||||| | ||||| ||||| || || || ||  |  ||||  ||| || 
Sbjct  279  AAGTGGTGTCATCCCATTTCACACTCACCCTGGTGCTTCTGAAAT--TTTACTTGTAGTG  336

Query  343  CAAGGAGAAATATGC-GCGGGATTTATTTCTTCCTCGGACAACAAAGTGTTT-TTT-AAA  399
            ||||||  ||| | | || ||| || | | ||| || | ||| |   ||||| ||| |||
Sbjct  337  CAAGGATCAAT-TACTGCTGGA-TT-TGT-TTCATCAG-CAA-ATTCTGTTTATTTAAAA  390

Query  400  ACCCTAAAACAAGGAGATATTATGGTATTTCCACAAGGGTTACTGCATTTTCA-G--ATT  456
            || || ||| | || ||| | ||||| ||||||||||| ||| | |||||||| |  | |
Sbjct  391  ACACTTAAAAAGGGTGATCTAATGGTTTTTCCACAAGGATTATTACATTTTCAAGTCAGT  450

Query  457  AATTCAGGGAAAACTTCAGCTTTGGCTAT-TATTTCTTTCAGTAGCCCAACACCAGGGCT  515
             || | ||  | ||||| |  | || ||| || |||||| || ||| | |  || || ||
Sbjct  451  GATGCTGGATATACTTCTG--TCGGTTATGTA-TTCTTT-AGCAGCTCTAATCCTGGACT  506

Query  516  TCAAATTACTGATTTTGCTTTGTTTGCTAATGATTTGCCTACTGAACTT-GTCGCAGCCA  574
            ||| |||||||||||||| || ||||||||||||||||| ||| || || || || || |
Sbjct  507  TCAGATTACTGATTTTGCATTATTTGCTAATGATTTGCCAACT-AAGTTGGTTGCGGCAA  565

Query  575  CCACATTCCTTGATGCTGCTTTAATCAAGAAGTTGAAGGGTGTTCTTGGAGGAACCAACT  634
            | |||||||||||||  ||   ||| |||||  | |||||||| |||||||| || || |
Sbjct  566  CAACATTCCTTGATGAAGCAACAATTAAGAAACTTAAGGGTGTGCTTGGAGGTACTAATT  625

Query  635  AA  636
            ||
Sbjct  626  AA  627



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 25120313673


  Database: Tomato Genome cDNA (ITAG release 2.40)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 41,981,568
  Number of sequences in database:  34,725



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5