BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1007 Score E Sequences producing significant alignments: (Bits) Value Solyc03g034220.3.1 1003 0.0 Solyc02g085950.4.1 693 0.0 Solyc02g085940.4.1 592 2e-168 Solyc02g063150.3.1 590 7e-168 Solyc02g085933.1.1 187 1e-46 >Solyc03g034220.3.1 Length=543 Score = 1003 bits (543), Expect = 0.0 Identities = 543/543 (100%), Gaps = 0/543 (0%) Strand=Plus/Plus Query 137 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 60 Query 197 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 120 Query 257 CAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAGGTG 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAGGTG 180 Query 317 TGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCTGAC 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCTGAC 240 Query 377 GAGCAATTGCTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAA 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GAGCAATTGCTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAA 300 Query 437 TTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTATGAT 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTATGAT 360 Query 497 GGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTG 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTG 420 Query 557 TTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATTGGA 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATTGGA 480 Query 617 TTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAAGGCTAC 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAAGGCTAC 540 Query 677 TAA 679 ||| Sbjct 541 TAA 543 >Solyc02g085950.4.1 Length=579 Score = 693 bits (375), Expect = 0.0 Identities = 487/543 (90%), Gaps = 0/543 (0%) Strand=Plus/Plus Query 137 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 196 |||||||||||| | |||||||||| ||||||||||| ||| |||||| | |||||||| Sbjct 37 ATGGCTTCCTCTATAGTTTCTTCAGCTGCTGTTGCCACCCGCGGCAATGGTGCACAAGCT 96 Query 197 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 256 |||||||||||||| |||||||| ||||| || | || ||||||||||| ||| |||| Sbjct 97 AGCATGGTTGCACCCTTCACTGGACTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAG 156 Query 257 CAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAGGTG 316 |||||||||||||| || |||||||||||||| ||||||||||| || |||||||||||| Sbjct 157 CAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCATGCAGGTG 216 Query 317 TGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCTGAC 376 |||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||| Sbjct 217 TGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGAC 276 Query 377 GAGCAATTGCTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAA 436 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 277 GAGCAATTGCTCAGCGAAATTGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAA 336 Query 437 TTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTATGAT 496 || |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||| Sbjct 337 TTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGAT 396 Query 497 GGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTG 556 || || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 397 GGCAGATACTGGACCATGTGGAAGTTGCCCATGTTTGGGTGCACTGATGCAACCCAGGTC 456 Query 557 TTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATTGGA 616 ||||||||||| || ||||| || ||||| ||||| || ||||||||| | ||||| ||| Sbjct 457 TTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGA 516 Query 617 TTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAAGGCTAC 676 ||||||||||| |||||||||||||| ||||||||||| || |||||||| ||||| ||| Sbjct 517 TTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATAC 576 Query 677 TAA 679 ||| Sbjct 577 TAA 579 >Solyc02g085940.4.1 Length=459 Score = 592 bits (320), Expect = 2e-168 Identities = 410/455 (90%), Gaps = 0/455 (0%) Strand=Plus/Plus Query 137 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 196 |||||||||||| | |||||||||| ||||||||||| ||| |||||| | |||||||| Sbjct 1 ATGGCTTCCTCTATAGTTTCTTCAGCTGCTGTTGCCACCCGCGGCAATGGTGCACAAGCT 60 Query 197 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 256 |||||||||||||| |||||||| ||||| || | || ||||||||||| ||| |||| Sbjct 61 AGCATGGTTGCACCCTTCACTGGACTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAG 120 Query 257 CAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAGGTG 316 |||||||||||||| || |||||||||||||| ||||||||||| || |||||||||||| Sbjct 121 CAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCATGCAGGTG 180 Query 317 TGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCTGAC 376 |||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||| Sbjct 181 TGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGAC 240 Query 377 GAGCAATTGCTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAA 436 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 241 GAGCAATTGCTCAGCGAAATTGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAA 300 Query 437 TTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTATGAT 496 || |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||| Sbjct 301 TTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGAT 360 Query 497 GGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTG 556 || || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 361 GGCAGATACTGGACCATGTGGAAGTTGCCCATGTTTGGGTGCACTGATGCAACCCAGGTC 420 Query 557 TTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCC 591 ||||||||||| || ||||| || ||||| ||||| Sbjct 421 TTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCC 455 >Solyc02g063150.3.1 Length=546 Score = 590 bits (319), Expect = 7e-168 Identities = 471/546 (86%), Gaps = 3/546 (1%) Strand=Plus/Plus Query 137 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 196 ||||||||||| | | || || ||||| | ||| || || ||||||||| | |||||| Sbjct 1 ATGGCTTCCTCAATTGTCTCATCGGCAGCCGCTGCTACCCGTAGCAATGTTGCTCAAGCT 60 Query 197 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 256 |||||||| ||||| ||||| || |||||||| | || |||| || ||||| |||||| Sbjct 61 AGCATGGTCGCACCCTTCACCGGACTCAAATCCGCCGCTTCTTTTCCCGTTACCAAGAAG 120 Query 257 --CAA-AACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAG 313 ||| ||| ||||||| || ||| ||||||||||||||||| | ||||| ||||||||| Sbjct 121 AACAACAACGTTGACATTACCTCCCTTGCTAGCAATGGTGGACGCGTTAGATGCATGCAG 180 Query 314 GTGTGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCT 373 |||||||||||||| ||||||||||| ||||||||| | |||||||||||||| ||||| Sbjct 181 GTGTGGCCACCAATCAACATGAAGAAATACGAGACATTGTCATACCTTCCTGACTTGTCC 240 Query 374 GACGAGCAATTGCTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTG 433 || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 241 GATGAGCAATTGCTTAGCGAAATTGAGTATCTTTTGAAAAATGGATGGGTTCCTTGCTTG 300 Query 434 GAATTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTAT 493 ||||| |||||||||| ||||||||| ||||| |||||||||| || || |||||||| Sbjct 301 GAATTCGAGACTGAGCGCGGATTTGTGTACCGAGAGAACAACAGTTCCCCTGGATACTAC 360 Query 494 GATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAA 553 ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 361 GATGGTAGATACTGGACCATGTGGAAGTTACCTATGTTTGGGTGCACTGATGCAACACAG 420 Query 554 GTGTTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATT 613 ||||||||||||||||||||||| || ||||| ||||||||||| ||||| | || || Sbjct 421 GTGTTGGCTGAGGTTCAAGAGGCGAAGAAGGCGTACCCACAAGCCTGGGTTCGTATTATC 480 Query 614 GGATTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAAGGC 673 ||||||||||| || |||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct 481 GGATTCGACAACGTTCGTCAAGTCCAGTGCATCAGCTTCATTGCCTACAAGCCAGAAGGA 540 Query 674 TACTAA 679 | |||| Sbjct 541 TTCTAA 546 >Solyc02g085933.1.1 Length=279 Score = 187 bits (101), Expect = 1e-46 Identities = 149/173 (86%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 137 ATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCT 196 |||||||| || || || || ||||||||||||||||| ||| |||||| | |||||||| Sbjct 173 ATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCT 114 Query 197 AGCATGGTTGCACCTTTCACTGGTCTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAG 256 |||||||||||||| |||||||| ||||| || | || ||||||||||| ||| |||| Sbjct 113 AGCATGGTTGCACCCTTCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAG 54 Query 257 CAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCAT 309 |||||||||||||| || |||||||||||||| ||||||||||| || ||||| Sbjct 53 CAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCAT 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33527178860 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5