BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: N.benthamiana Genome v1.0.1 predicted cDNA 57,140 sequences; 82,582,885 total letters Query= AtSAR1B Length=1005 Score E Sequences producing significant alignments: (Bits) Value Niben101Scf00332g05012.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 427 1e-118 Niben101Scf04473g02002.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 427 1e-118 Niben101Scf00466g04034.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 422 7e-117 Niben101Scf07576g00030.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 422 7e-117 Niben101Scf01623g17008.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 409 5e-113 Niben101Scf02693g00001.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 399 3e-110 Niben101Scf09612g00005.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 383 3e-105 Niben101Scf09203g01012.1sp|Q8QHI3|ARL3_XENLA *-*- ADP-ribosylatio... 359 5e-98 Niben101Scf05336g00011.1sp|O45379|ARL3_CAEEL *-*- ADP-ribosylatio... 353 2e-96 Niben101Scf05099g00008.1sp|Q58DI9|ARL11_BOVIN *-*- ADP-ribosylati... 322 7e-87 Niben101Scf04819g02004.1sp|Q58DI9|ARL11_BOVIN *-*- ADP-ribosylati... 191 2e-47 Niben101Scf02583g06006.1sp|P52885|SAR1_TOBAC *-** GTP-binding pro... 110 6e-23 >Niben101Scf00332g05012.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1391 Score = 427 bits (231), Expect = 1e-118 Identities = 466/583 (80%), Gaps = 2/583 (0%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||||||| | ||||||||||| ||||| |||| || | || |||||||| || || Sbjct 252 ATGTTCTTGGTAGATTGGTTCTATGGAATTCTAGCAACGCTTGGATTATGGCAGAAGGAG 311 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||||||| | || ||||||||||| |||||||| || ||||| || ||| | Sbjct 312 GCTAAGATCTTGTTTTTGGGCCTCGATAATGCCGGCAAAACCACCTTACTCCATATGTTG 371 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 ||||| |||||||| ||||| |||||||| || ||| | || || || || || ||||| Sbjct 372 AAAGATGAGAGATTGGTTCAACATCAGCCAACACAATACCCGACATCAGAGGAGCTTAGT 431 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 ||||| || ||||||||||| || ||||| ||||| ||||||||||||||||| | ||| Sbjct 432 ATTGGCAAGATCAAGTTCAAAGCATTTGACTTGGGCGGTCATCAGATTGCTCGACGTGTT 491 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||| ||||| ||||| ||||||||||| ||||| |||||| | | ||||||| Sbjct 492 TGGAAAGATTATTATGCTAAGGTGGATGCTGTTGTATACCTGGTGGATTCCTTTGACAAA 551 Query 380 GAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTT-GC 438 ||||| ||||||||||| || | |||||| |||||||| ||||| ||||| | | || || Sbjct 552 GAAAGGTTTGCAGAGTCCAAGAAAGAGCTGGATGCTCTCCTCTCTGATGA-GTCGTTGGC 610 Query 439 AACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 ||||| || |||||||| || || |||||||| || ||||| ||||| ||||| ||||| Sbjct 611 CACTGTTCCTTTTCTGATACTGGGTAACAAGATAGACATCCCATATGCTGCTTCAGAAGA 670 Query 499 CGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCT 558 |||||| | || || |||| || || | ||||||| || ||||| || || | || Sbjct 671 TGAACTGCGTTACCATATGGGGCTAACGGGCGTCACCACTGGCAAGGGGAAGGTAAACCT 730 Query 559 CGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGG 618 | ||| || ||| || || ||||||| |||||||||||||| ||||| |||||||| Sbjct 731 GGCAGATTCCAATGTCCGTCCTGTTGAGGTATTCATGTGCAGCATAGTCCGCAAAATGGG 790 Query 619 TTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAACTAA 661 ||||| || || |||| |||| | |||||||| ||||| ||| Sbjct 791 ATATGGAGAAGGCTTCAGATGGATGTCTCAGTATATCAAGTAA 833 >Niben101Scf04473g02002.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1177 Score = 427 bits (231), Expect = 1e-118 Identities = 466/583 (80%), Gaps = 2/583 (0%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||||||| ||||||||||||||||| | | || ||| | || | ||||| ||||| Sbjct 222 ATGTTCTTGGTCGATTGGTTCTACGGAGTTCTCGCATCGCTTGGTCTGTGGCAGAAAGAG 281 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||||||| | || || |||||||| ||||||||||| || ||||| ||| | Sbjct 282 GCTAAGATCTTGTTTTTAGGCCTTGATAATGCCGGCAAAACTACCTTGCTTCATATGTTG 341 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 |||||||||||||| ||||| |||||||| || ||| | || || || || || ||||| Sbjct 342 AAAGACGAGAGATTGGTTCAACATCAGCCAACACAATACCCGACATCAGAGGAGCTTAGT 401 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 ||||| ||||| ||||||||||| ||||| ||||| || ||||||||||||||| | || Sbjct 402 ATTGGGAAAATTAAGTTCAAGGCATTTGACTTGGGCGGGCATCAGATTGCTCGTCGAGTG 461 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||| ||||| ||||| ||||||||||| || || |||||||| ||||||||| Sbjct 462 TGGAAAGATTATTATGCTAAGGTGGATGCTGTTGTTTATCTGGTGGATGCCTATGACAAA 521 Query 380 GAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTT-GC 438 ||||| ||||| || || || | |||||| |||||||| ||||| ||||| | | || || Sbjct 522 GAAAGGTTTGCCGAATCTAAGAAAGAGCTGGATGCTCTCCTCTCTGATGA-GTCGTTGGC 580 Query 439 AACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 | ||| || ||||| || || || |||||||| || ||||| ||||| || || ||||| Sbjct 581 CAGTGTTCCTTTTCTTATACTGGGTAACAAGATAGACATCCCATATGCTGCATCAGAAGA 640 Query 499 CGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCT 558 ||| || | || ||| |||| || || | |||| || || ||||| || || | || Sbjct 641 TGAATTGCGTTACCACATGGGGCTAACGGGCATCACAACTGGCAAGGGAAAGGTAAACCT 700 Query 559 CGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGG 618 | ||| || |||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct 701 GGCAGAATCCAATGTTCGTCCCCTTGAGGTATTCATGTGCAGCATAGTCCGCAAAATGGG 760 Query 619 TTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAACTAA 661 ||||| || || ||||||||||||||||| ||||| || ||| Sbjct 761 ATATGGAGAAGGCTTCAAATGGCTCTCTCAATACATTAAATAA 803 >Niben101Scf00466g04034.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=778 Score = 422 bits (228), Expect = 7e-117 Identities = 465/583 (80%), Gaps = 2/583 (0%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||||||| | ||||||||||| ||||| |||| || | || |||||||| || || Sbjct 142 ATGTTCTTGGTAGATTGGTTCTATGGAATTCTAGCAACGCTCGGATTATGGCAGAAGGAG 201 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||||||| | || ||||||||||| |||||||| || ||||| || ||| | Sbjct 202 GCTAAGATCTTGTTTTTGGGCCTCGATAATGCCGGCAAAACCACCTTACTCCATATGTTG 261 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 ||||| |||||||| ||||| |||||||| || ||| |||| ||||| || || ||||| Sbjct 262 AAAGATGAGAGATTGGTTCAACATCAGCCAACACAATATCCGACGTCAGAGGAGCTTAGT 321 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 || || || ||||||||||| || ||||| |||||||||||||| |||||||| | ||| Sbjct 322 ATCGGCAAGATCAAGTTCAAAGCATTTGACTTGGGTGGTCATCAAATTGCTCGCCGTGTT 381 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||| ||||| ||||| ||||||||||| ||| | |||||| | | ||||||| Sbjct 382 TGGAAAGATTATTATGCTAAGGTCGATGCTGTTGTATACTTGGTGGATTCCTTTGACAAA 441 Query 380 GAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTG-C 438 ||||| ||||||||||| || | |||||| |||||||| ||||| || || | ||||| | Sbjct 442 GAAAGGTTTGCAGAGTCCAAGAAAGAGCTGGATGCTCTGCTCTCTGACGA-GTCCTTGGC 500 Query 439 AACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 |||||| || || ||||| || || |||||||| || ||||| ||||| || || ||||| Sbjct 501 AACTGTTCCTTTCCTGATACTGGGTAACAAGATAGACATCCCATATGCTGCCTCAGAAGA 560 Query 499 CGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCT 558 |||||| | || || |||| || || | ||||||| || || || || || | || Sbjct 561 TGAACTGCGTTACCATATGGGGCTAACGGGCGTCACCACTGGCAAAGGGAAGGTAAACCT 620 Query 559 CGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGG 618 | ||| || ||| || ||| ||||||| |||||||||||||| ||||| |||||||| Sbjct 621 GGCAGATTCCAATGTCCGTCCAGTTGAGGTATTCATGTGCAGCATAGTCCGCAAAATGGG 680 Query 619 TTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAACTAA 661 ||||| || || |||| |||| | |||||||| ||||| ||| Sbjct 681 ATATGGAGAAGGCTTCAGATGGATGTCTCAGTATATCAAGTAA 723 >Niben101Scf07576g00030.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=778 Score = 422 bits (228), Expect = 7e-117 Identities = 465/583 (80%), Gaps = 2/583 (0%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||||||| | ||||||||||| ||||| |||| || | || |||||||| || || Sbjct 142 ATGTTCTTGGTAGATTGGTTCTATGGAATTCTAGCAACGCTCGGATTATGGCAGAAGGAG 201 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||||||| | || ||||||||||| |||||||| || ||||| || ||| | Sbjct 202 GCTAAGATCTTGTTTTTGGGCCTCGATAATGCCGGCAAAACCACCTTACTCCATATGTTG 261 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 ||||| |||||||| ||||| |||||||| || ||| |||| ||||| || || ||||| Sbjct 262 AAAGATGAGAGATTGGTTCAACATCAGCCAACACAATATCCGACGTCAGAGGAGCTTAGT 321 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 || || || ||||||||||| || ||||| |||||||||||||| |||||||| | ||| Sbjct 322 ATCGGCAAGATCAAGTTCAAAGCATTTGACTTGGGTGGTCATCAAATTGCTCGCCGTGTT 381 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||| ||||| ||||| ||||||||||| ||| | |||||| | | ||||||| Sbjct 382 TGGAAAGATTATTATGCTAAGGTCGATGCTGTTGTATACTTGGTGGATTCCTTTGACAAA 441 Query 380 GAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTG-C 438 ||||| ||||||||||| || | |||||| |||||||| ||||| || || | ||||| | Sbjct 442 GAAAGGTTTGCAGAGTCCAAGAAAGAGCTGGATGCTCTGCTCTCTGACGA-GTCCTTGGC 500 Query 439 AACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 |||||| || || ||||| || || |||||||| || ||||| ||||| || || ||||| Sbjct 501 AACTGTTCCTTTCCTGATACTGGGTAACAAGATAGACATCCCATATGCTGCCTCAGAAGA 560 Query 499 CGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCT 558 |||||| | || || |||| || || | ||||||| || || || || || | || Sbjct 561 TGAACTGCGTTACCATATGGGGCTAACGGGCGTCACCACTGGCAAAGGGAAGGTAAACCT 620 Query 559 CGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGG 618 | ||| || ||| || ||| ||||||| |||||||||||||| ||||| |||||||| Sbjct 621 GGCAGATTCCAATGTCCGTCCAGTTGAGGTATTCATGTGCAGCATAGTCCGCAAAATGGG 680 Query 619 TTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAACTAA 661 ||||| || || |||| |||| | |||||||| ||||| ||| Sbjct 681 ATATGGAGAAGGCTTCAGATGGATGTCTCAGTATATCAAGTAA 723 >Niben101Scf01623g17008.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR025322 (Protein of unknown function DUF4228, plant), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1366 Score = 409 bits (221), Expect = 5e-113 Identities = 448/560 (80%), Gaps = 6/560 (1%) Strand=Plus/Plus Query 92 GATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAAGCAAAGATCTTG 151 ||||||||||| || | || |||| |||| ||||||||||| ||||| |||||| | Sbjct 218 GATTGGTTCTATGGCGTTTTGTCTTCTCTAGGTTTATGGCAAAAGGAAGCTAAGATCCTC 277 Query 152 TTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTCAAAGACGAGAGA 211 ||||| |||||||||||||| |||||||| || | ||||||||||||||||||||||| Sbjct 278 TTTCTAGGTCTCGATAATGCCGGCAAAACCACTCTTCTTCACATGCTCAAAGACGAGAGG 337 Query 212 TTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGCATTGGAAAAATC 271 ||||||||||||||||||||||| |||| || || ||||| || || || ||||||||| Sbjct 338 TTAGTTCAGCATCAGCCGACGCAGTATCCGACATCGGAAGAGCTGAGTATCGGAAAAATC 397 Query 272 AAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTTTGGAAAGATTAC 331 || ||||| || |||||||| || ||||||||||| ||||| | || |||||||||||| Sbjct 398 AAATTCAAAGCGTTTGATTTAGGAGGTCATCAGATCGCTCGCCGTGTCTGGAAAGATTAC 457 Query 332 TATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAAGAAAGATTTGCA 391 ||||||||||||||||||||||| ||||| || ||||| ||||| |||||| | |||||| Sbjct 458 TATGCCAAGGTTGATGCTGTTGTATACCTGGTAGATGCATATGATAAAGAACGGTTTGCA 517 Query 392 GAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTGCAACTGTCCCGTTT 451 |||||||| | |||| | || || || || || ||||| ||||| || |||||||| || Sbjct 518 GAGTCAAAGAAAGAGTTAGACGCACTGCTATCTGATGAGGCCCTAGCTACTGTCCCCTTC 577 Query 452 CTGATTCTTGGG-AACAAGATTGATATCCCTTATGCAGCTTCTGAAGACGAACTGAGGTA 510 || ||| ||||| |||||||| || || || ||||| || || ||||| || ||| | || Sbjct 578 CTCATT-TTGGGAAACAAGATAGACATACCGTATGCTGCCTCGGAAGATGAGCTGCGCTA 636 Query 511 TCAC-TTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCTCGGAGACTCTG 569 |||| |||| | | ||| |||| | || ||||| || |||| | | || ||| Sbjct 637 TCACCTTGGCT-TGACTGGTATCACTAGTGGCAAGGGTAAGGTGAGTGTTGCTGATTCTA 695 Query 570 GTGTTCGCCCACTT-GAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGGTTATGGCGAG 628 ||||||| || ||| ||||| || |||||||| ||||| || |||||||| ||||| || Sbjct 696 GTGTTCGTCC-CTTGGAGGTGTTTATGTGCAGTATTGTACGCAAAATGGGGTATGGTGAT 754 Query 629 GGATTCAAATGGCTCTCTCA 648 || || || ||| | ||||| Sbjct 755 GGCTTTAAGTGGGTTTCTCA 774 >Niben101Scf02693g00001.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR025322 (Protein of unknown function DUF4228, plant), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1460 Score = 399 bits (216), Expect = 3e-110 Identities = 440/551 (80%), Gaps = 4/551 (1%) Strand=Plus/Plus Query 92 GATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAAGCAAAGATCTTG 151 ||||||||||| || | || |||| |||| ||||||||||| ||||| |||||| | Sbjct 243 GATTGGTTCTATGGCGTTTTGTCTTCTCTAGGTTTATGGCAAAAGGAAGCTAAGATCCTT 302 Query 152 TTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTCAAAGACGAGAGA 211 |||||||||||||| ||||| |||||||| || | ||||||||||||||||||||||| Sbjct 303 TTTCTCGGTCTCGACAATGCCGGCAAAACCACTCTTCTTCACATGCTCAAAGACGAGAGG 362 Query 212 TTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGCATTGGAAAAATC 271 ||||||||||||||||||||||| |||| || || ||||| || || || ||||||||| Sbjct 363 TTAGTTCAGCATCAGCCGACGCAGTATCCGACATCGGAAGAGCTGAGTATCGGAAAAATC 422 Query 272 AAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTTTGGAAAGATTAC 331 || ||||| || |||||||| || ||||||||||| ||||| | || ||||||||||| Sbjct 423 AAATTCAAAGCGTTTGATTTAGGAGGTCATCAGATCGCTCGCCGCGTCTGGAAAGATTAT 482 Query 332 TATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAAGAAAGATTTGCA 391 ||||||||||||||||||||||| ||||| || ||||| ||||||||||| | |||||| Sbjct 483 TATGCCAAGGTTGATGCTGTTGTATACCTGGTAGATGCATATGACAAAGAGCGGTTTGCA 542 Query 392 GAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTGCAACTGTCCCGTTT 451 || ||||| | |||| | || || || || || ||||| ||||| || |||||||| || Sbjct 543 GAATCAAAGAAAGAGTTAGACGCACTGCTATCTGATGAGGCCCTAGCTACTGTCCCCTTC 602 Query 452 CTGATTCTTGGG-AACAAGATTGATATCCCTTATGCAGCTTCTGAAGACGAACTGAGGTA 510 || ||| ||||| |||||||| || || || ||||| || || ||||| || ||| | || Sbjct 603 CTCATT-TTGGGAAACAAGATAGACATACCGTATGCTGCCTCGGAAGATGAGCTGCGCTA 661 Query 511 TCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCTCGGAGACTCTGG 570 |||| | ||| | ||| |||| || || ||||| || |||| | | || ||| | Sbjct 662 TCACCTTGGTTTGACTGGTGTCACTACTGGCAAGGGAAAGGTGAGTGTTGCTGATTCTAG 721 Query 571 TGTTCGCCCACTT-GAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGGTTATGGCGAGG 629 |||||| || ||| ||||| || |||||||| ||||| || |||||||| ||||| || | Sbjct 722 TGTTCGTCC-CTTGGAGGTGTTTATGTGCAGTATTGTACGGAAAATGGGGTATGGTGATG 780 Query 630 GATTCAAATGG 640 | || || ||| Sbjct 781 GCTTTAAGTGG 791 >Niben101Scf09612g00005.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport) Length=1162 Score = 383 bits (207), Expect = 3e-105 Identities = 461/587 (79%), Gaps = 4/587 (1%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||||||| ||||||||||||| ||| | | || ||| | || | ||||| ||||| Sbjct 210 ATGTTCTTGGTCGATTGGTTCTATGGAGTTCTCGCATCGCTTGGTCTGTGGCAGAAAGAG 269 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||||||| | || || |||||||| || |||||||| || ||||| ||| | Sbjct 270 GCTAAGATCTTGTTT-TAGGCCTTGATAATGCCGGAAAAACTACCTTGCTTCATATGTTG 328 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 |||||||||||||| ||||| |||||||| || ||| | || || || || || ||||| Sbjct 329 AAAGACGAGAGATTGGTTCAACATCAGCCAACACAATACCCGACATCAGAGGAGCTTAGT 388 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 || || || || ||||||||||| ||||| ||||| || ||||||||||||||| | || Sbjct 389 ATCGGGAATATTAAGTTCAAGGCATTTGACTTGGGCGGGCATCAGATTGCTCGTCGAGTG 448 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||| || || |||| ||||||||||| ||||| |||||||| ||||||||| Sbjct 449 TGGAAAGATTATTACGCTAAGGCGGATGCTGTTGTTTACCTGGTGGATGCCTATGACAAA 508 Query 380 GAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTG-C 438 ||||| ||||| || || || | |||||| |||||||| ||||| ||||| | | ||| | Sbjct 509 GAAAGGTTTGCTGAATCTAAGAAAGAGCTGGATGCTCTCCTCTCTGATGA-GTCATTGGC 567 Query 439 AACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 | || || ||||| || || || |||||||| || ||| | ||||| || || ||||| Sbjct 568 TAGCGTTCCTTTTCTTATACTGGGTAACAAGATAGACATCTCGTATGCTGCATCAGAAGA 627 Query 499 CGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACGCT 558 ||| || | || ||| |||| || || | |||| || || ||||| || || | || Sbjct 628 TGAATTGCGTTACCACATGGGGCTAACGGGCATCACAACTGGCAAGGGAAAGGTAAACCT 687 Query 559 CGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATGGG 618 | ||| || |||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct 688 GGCAGAATCCAATGTTCGACCCCTTGAGGTATTCATGTGCAGCATAGTCCGCAAAATGGG 747 Query 619 TTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAACTAA-AGA 664 ||||| || || ||||||||| ||||||| ||||| || ||| ||| Sbjct 748 ATATGGAGAAGGCTTCAAATGGGTCTCTCAATACATTAAATAACAGA 794 >Niben101Scf09203g01012.1 sp|Q8QHI3|ARL3_XENLA *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1301 Score = 359 bits (194), Expect = 5e-98 Identities = 456/586 (78%), Gaps = 4/586 (1%) Strand=Plus/Plus Query 74 GAAACCATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAA 133 ||| | ||||| |||| ||||||||||||||| | ||||| || |||| || ||||| Sbjct 164 GAAGCGATGTTTGTGTTGGATTGGTTCTACGGAGTGTTAGCATCACTAGGATTGTGGCAG 223 Query 134 AAAGAAGCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCAC 193 || || || ||||| |||||| | || || ||||||||||||||||| || || ||||| Sbjct 224 AAGGATGCGAAGATATTGTTTTTAGGACTTGATAATGCTGGCAAAACCACTTTGCTTCAT 283 Query 194 ATGCTCAAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAA 253 ||| | ||||| |||||||| || |||||||| || |||||| | ||||| || || || Sbjct 284 ATGTTGAAAGATGAGAGATTGGTGCAGCATCAACCTACGCAATACCCAACATCAGAGGAG 343 Query 254 CTTAGCATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGT 313 | || || || ||||| |||||||||||||||||||| || || || || |||||| | Sbjct 344 TTGAGTATAGGTAAAATTAAGTTCAAGGCTTTTGATTTAGGAGGACACCAAATTGCTAGA 403 Query 314 AGGGTTTGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTAT 373 || || |||| ||| |||||||||||||| || || ||||| |||||||| |||||||| Sbjct 404 AGAGTCTGGAGAGACTACTATGCCAAGGTGGACGCAGTTGTTTACCTTGTTGATGCTTAC 463 Query 374 GACAAAGAAAGATTTGCAGAGTCAAA-AAGAGAGCTTGATGCTCTTCTCTCGGATGAAGC 432 ||| ||| || ||| | |||||||| ||| || | |||| |||||||| ||||| | Sbjct 464 GACCGAGAGAGGTTTCCCGAGTCAAAGAAG-GAATTGGATGGGCTTCTCTCAGATGA-GT 521 Query 433 CCTT-GCAACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTT 491 | || |||| |||||| ||||| ||||| || |||||||| ||||| || ||||| |||| Sbjct 522 CATTGGCAAATGTCCCATTTCTCATTCTGGGAAACAAGATCGATATACCATATGCTGCTT 581 Query 492 CTGAAGACGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAG 551 | |||||||| ||| | ||||||||||| || ||| | ||||| || ||||| || | Sbjct 582 CAGAAGACGAGCTGCGTTATCACTTGGGCCTAACTGGTGTGACCACTGGCAAGGGTAACG 641 Query 552 TGACGCTCGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTA 611 | | |||| | | ||| || ||| ||||||| || |||||||||||||| || | Sbjct 642 TCAACCTCGCTGGTACAAATGTCCGTCCAATTGAGGTGTTTATGTGCAGCATTGTGCGCA 701 Query 612 AAATGGGTTATGGCGAGGGATTCAAATGGCTCTCTCAGTACATCAA 657 | ||||| ||||| ||||| ||||| ||| | || || |||||||| Sbjct 702 AGATGGGATATGGTGAGGGCTTCAAGTGGATGTCGCAATACATCAA 747 >Niben101Scf05336g00011.1 sp|O45379|ARL3_CAEEL *-*- ADP-ribosylation factor-like protein 3 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=1112 Score = 353 bits (191), Expect = 2e-96 Identities = 446/572 (78%), Gaps = 6/572 (1%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||| ||| |||||||| || ||| | ||| | || |||| || |||||||||||| Sbjct 222 ATGTTTCTGTGGGATTGGTTGTATGGAGTTTTATCATCTCTAGGTTTGTGGCAAAAAGAA 281 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || |||||||| || | || || || |||||||||||||| || | |||||||||||| Sbjct 282 GCTAAGATCTTATTCTTAGGCCTTGACAATGCTGGCAAAACCACTCTGCTTCACATGCTC 341 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGC 259 ||||| ||||| || ||||||||||||||||| || |||| || |||||||| | || Sbjct 342 AAAGATGAGAGGTTGGTTCAGCATCAGCCGACTCAGTATCCTACATCTGAAGAGTTGAGT 401 Query 260 ATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTT 319 ||||| || || |||||||| |||||||| ||||| ||||||||||| |||||| |||| Sbjct 402 ATTGGGAAGATAAAGTTCAAAGCTTTTGACTTGGGAGGTCATCAGATCGCTCGTCGGGTC 461 Query 320 TGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAAA 379 ||||||||||||||||||||||||||||| ||||| ||||| || ||||| | |||||| Sbjct 462 TGGAAAGATTACTATGCCAAGGTTGATGCAGTTGTATACCTAGTTGATGCATTCGACAAA 521 Query 380 GAAAGATTTGCAGAGTCAAA-AAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTGC 438 || | |||||||| ||||| ||| || | ||||| ||||| || ||||| ||| || | Sbjct 522 GAGCGGTTTGCAGAATCAAAGAAG-GAATTAGATGCGCTTCTATCTGATGAGGCCATTTC 580 Query 439 AACTGTCCCGTTTCTGATTCTTGGG-AACAAGATTGATATCCCTTATGCAGCTTCTGAAG 497 |||||||| || || ||| ||||| |||||||| || || || ||||| || || |||| Sbjct 581 TACTGTCCCCTTCCTCATT-TTGGGTAACAAGATAGACATACCATATGCTGCCTCAGAAG 639 Query 498 ACGAACTGAGGTATCA-CTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACG 556 | ||| || | ||||| ||||| | | || |||| || || ||||| || | || Sbjct 640 ATGAATTGCGTTATCATCTTGGCT-TGACCGGTGTCACTACTGGCAAGGGTAAGGCGAAT 698 Query 557 CTCGGAGACTCTGGTGTTCGCCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAATG 616 || | || || | |||| || | ||||| || ||||| |||||||| || |||||| Sbjct 699 CTTGCTGATTCAAATCTTCGGCCTTTAGAGGTATTTATGTGTAGCATTGTACGGAAAATG 758 Query 617 GGTTATGGCGAGGGATTCAAATGGCTCTCTCA 648 ||||||||||| || || || ||| | ||||| Sbjct 759 GGTTATGGCGATGGCTTTAAGTGGGTATCTCA 790 >Niben101Scf05099g00008.1 sp|Q58DI9|ARL11_BOVIN *-*- ADP-ribosylation factor-like protein 11 IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=606 Score = 322 bits (174), Expect = 7e-87 Identities = 362/455 (80%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 74 GAAACCATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAA 133 ||| | ||||| |||| ||||||||||||||| | ||||| || |||| || ||||| Sbjct 145 GAAGCGATGTTTGTGTTGGATTGGTTCTACGGAGTGTTAGCATCACTAGGATTGTGGCAG 204 Query 134 AAAGAAGCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCAC 193 || || || ||||| |||||| | || || ||||||||||||||||| || || ||||| Sbjct 205 AAGGATGCGAAGATTTTGTTTTTAGGACTTGATAATGCTGGCAAAACCACTTTGCTTCAT 264 Query 194 ATGCTCAAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAA 253 ||| | ||||| |||||||| || |||||||| || |||||| | ||||| || || ||| Sbjct 265 ATGTTGAAAGATGAGAGATTGGTGCAGCATCAACCTACGCAATACCCAACATCAGAGGAA 324 Query 254 CTTAGCATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGT 313 | || || || || || ||||| |||||||||||||| || || || || |||||| | Sbjct 325 TTGAGTATAGGTAACATTAAGTTTAAGGCTTTTGATTTAGGAGGACACCAAATTGCTAGA 384 Query 314 AGGGTTTGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTAT 373 || || |||| ||| |||||||||||||| || |||||||| |||||||| ||||||||| Sbjct 385 AGAGTCTGGAGAGACTACTATGCCAAGGTGGACGCTGTTGTTTACCTTGTTGATGCTTAT 444 Query 374 GACAAAGAAAGATTTGCAGAGTCAAA-AAGAGAGCTTGATGCTCTTCTCTCGGATGAAGC 432 ||| ||| || ||| | |||||||| ||| || || |||| |||||||| ||||| | Sbjct 445 GACCGAGAGAGGTTTCCCGAGTCAAAGAAG-GAACTAGATGGGCTTCTCTCCGATGA-GT 502 Query 433 CCTTG-CAACTGTCCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTT 491 | ||| ||| ||||| ||||| ||||| || |||||||||||||| || || || |||| Sbjct 503 CATTGGCAAACGTCCCATTTCTCATTCTGGGAAACAAGATTGATATACCATACGCTGCTT 562 Query 492 CTGAAGACGAACTGAGGTATCACTTGGGTCTCACT 526 | |||||||| ||| | ||||||||||| || ||| Sbjct 563 CAGAAGACGAGCTGCGTTATCACTTGGGCCTAACT 597 >Niben101Scf04819g02004.1 sp|Q58DI9|ARL11_BOVIN *-*- ADP-ribosylation factor-like protein 11 IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport), GO:0007264 (small GTPase mediated signal transduction) Length=573 Score = 191 bits (103), Expect = 2e-47 Identities = 269/349 (77%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 207 AGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAGCATTGGAA 266 |||| || ||||||||||||||||| || |||| || |||||||| | || ||| | | Sbjct 92 AGAGGTTGGTTCAGCATCAGCCGACTCAGTATCCTACATCTGAAGAGTTGAGTATTTGGA 151 Query 267 AAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGTTTGGAAAG 326 | || |||||||| |||| ||| ||||| ||||||||||| |||||| |||| ||||||| Sbjct 152 AGATAAAGTTCAAAGCTTCTGACTTGGGAGGTCATCAGATCGCTCGTCGGGTCTGGAAAG 211 Query 327 ATTACTATGCCAAGGT-TG-ATGCTGTTGTCTACCTTG-TG---GATGCTTATGACAAAG 380 |||||||||||||||| | || ||| | | | || || ||||| | ||||||| Sbjct 212 ATTACTATGCCAAGGTCTCTATTGTGTCATTTCCAGTGGTGCTTGATGCATTCGACAAAG 271 Query 381 AAAGATTTGCAGAGTCAAA-AAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTTGCA 439 | | |||||||| ||||| ||| || | ||||| ||||| || ||||| |||||| | Sbjct 272 AGCGTTTTGCAGAATCAAAGAAG-GAATTAGATGCGCTTCTTTCTGATGAGGCCCTTTCT 330 Query 440 ACTGTCCCGTTTCTGATTCTTGGG-AACAAGATTGATATCCCTTATGCAGCTTCTGAAGA 498 |||||||| || || ||| ||||| |||||||| || || || ||||| || || ||||| Sbjct 331 ACTGTCCCCTTCCTCATT-TTGGGTAACAAGATAGACATACCATATGCTGCCTCAGAAGA 389 Query 499 CGAACTGAGGTATCA-CTTGGGTCTCACTAACTTCACCACCGGTAAGGG 546 ||| || | ||||| ||||| | | || || ||||||| || ||||| Sbjct 390 TGAATTGCGTTATCATCTTGGCT-TGACCAATGTCACCACTGGCAAGGG 437 >Niben101Scf02583g06006.1 sp|P52885|SAR1_TOBAC *-** GTP-binding protein SAR1 IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006886 (intracellular protein transport) Length=321 Score = 110 bits (59), Expect = 6e-23 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 80 ATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGAA 139 ||||| |||| ||||||||||||| | | ||||| || |||| || ||||| || || Sbjct 1 ATGTTTGTGTTGGATTGGTTCTACGAAGTGTTAGCATCACTAGGATTGTGGCAGAAGGAT 60 Query 140 GCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCTC 199 || ||||| |||||| | || || ||||||| ||||||||| || || ||||| ||| | Sbjct 61 GCGAAGATATTGTTTTTAGGACTTGATAATGTTGGCAAAACCACTTTGCTTCATATGTTG 120 Query 200 AAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAAC 243 ||||| |||||||| || |||||||| || | |||| | ||||| Sbjct 121 AAAGATGAGAGATTGGTGCAGCATCAACCTATGCAATACCCAAC 164 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79394202855 Database: N.benthamiana Genome v1.0.1 predicted cDNA Posted date: Mar 21, 2024 4:04 PM Number of letters in database: 82,582,885 Number of sequences in database: 57,140 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5