BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Capsicum annuum zunla Genome CDS (v2.0) 35,336 sequences; 36,029,754 total letters Query= Untitled_sequence Length=744 Score E Sequences producing significant alignments: (Bits) Value Capana01g000416BH035_ARATH Transcription factor bHLH35 OS=Arabido... 1375 0.0 Capana01g000418BH027_ARATH Transcription factor bHLH27 OS=Arabido... 928 0.0 Capana01g004240BH035_ARATH Transcription factor bHLH35 OS=Arabido... 896 0.0 Capana01g000441BH035_ARATH Transcription factor bHLH35 OS=Arabido... 765 0.0 Capana08g000254AMS_ARATH Transcription factor ABORTED MICROSPORES... 75.0 7e-13 >Capana01g000416 BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1 Length=744 Score = 1375 bits (744), Expect = 0.0 Identities = 744/744 (100%), Gaps = 0/744 (0%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 Query 121 GATGGGCCACAGTCATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTCAAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GATGGGCCACAGTCATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTCAAT 180 Query 181 GAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCCTCA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCCTCA 240 Query 241 ATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGGAGAATTCGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGGAGAATTCGA 300 Query 301 GCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATAACGATGTTGAATTTGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATAACGATGTTGAATTTGAT 360 Query 361 CAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAACTTGAGCAGCAGTATGGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAACTTGAGCAGCAGTATGGA 420 Query 421 TATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCTTCCCCTGTTGATGTGCTT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCTTCCCCTGTTGATGTGCTT 480 Query 481 GAGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTGGTGAGCCTCACATGCAGCAAA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GAGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTGGTGAGCCTCACATGCAGCAAA 540 Query 541 AGAAGAGACACAATGATAAAAGTTTGTGAGGTTTTTGAATCTTTGAATGTCAAAATAATT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGAAGAGACACAATGATAAAAGTTTGTGAGGTTTTTGAATCTTTGAATGTCAAAATAATT 600 Query 601 AGTGCAAATATCACTGCTTTCTCTGGGAGACTTCTCAAGACAGCTTTCATCGAGGCTGAT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AGTGCAAATATCACTGCTTTCTCTGGGAGACTTCTCAAGACAGCTTTCATCGAGGCTGAT 660 Query 661 GAAGAAGAGAGTGATATTTTGAAGTTGAGGATTCAAAGTGCTATAGCTTCTCTAAATGAT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GAAGAAGAGAGTGATATTTTGAAGTTGAGGATTCAAAGTGCTATAGCTTCTCTAAATGAT 720 Query 721 CCACATAGCCCTATGAGCTCTTAG 744 |||||||||||||||||||||||| Sbjct 721 CCACATAGCCCTATGAGCTCTTAG 744 >Capana01g000418 BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1 Length=573 Score = 928 bits (502), Expect = 0.0 Identities = 550/573 (96%), Gaps = 4/573 (1%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 Query 121 GATGGGCCACAGTCATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTCAAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GATGGGCCACAGTCATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTCAAT 180 Query 181 GAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCCTCA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCCTCA 240 Query 241 ATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGGAGAATTCGA 300 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 241 ATAATCAAAGATGCAATTGATCATATTCAAGATTTGCACGAGCAAGAGAGGAGAATTCGA 300 Query 301 GCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATAACGATGTTGAATTTGAT 360 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 301 GCAGAGATATCAGTGCTTGAATCTGGAAGGTCAAAGAAGAATAACGATGTTGAATTTGAT 360 Query 361 CAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAACTTGAGCAGCAGTATGGA 420 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 361 CAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAGACTTGAGCAGCAGTATGAC 420 Query 421 TATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCTTCCCC-TGT-TG-ATGTG 477 ||||||||||||| ||| ||||||| ||||||||||||||||||||| || || | | Sbjct 421 TATGATTCTTCAGAATCGACTACAAAATCATCACCATCCTCTTCCCCGTGGGTGGGAGGG 480 Query 478 CTTG-AGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTGGTGAGCCTCACATGCAG 536 ||| |||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct 481 ATTGCAGTTGAAGGTATCTTCGATGAGAGAGAAAACAATGGTGGTGAGCCTCACATGCAG 540 Query 537 CAAAAGAAGAGACACAATGATAAAAGTTTGTGA 569 ||||||||||||||||||||||||||||||||| Sbjct 541 CAAAAGAAGAGACACAATGATAAAAGTTTGTGA 573 >Capana01g004240 BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1 Length=756 Score = 896 bits (485), Expect = 0.0 Identities = 606/664 (91%), Gaps = 9/664 (1%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 ||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||| Sbjct 1 ATGGAGAACATCAGTGAAGACTACAATAATTATTGGGAAACAACCATGTTCTTACAATCG 60 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 |||||| ||||||||| |||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct 61 GAAGAACTCGATAGCTACTTCGACGAGGCAATCTCTTCATACTATGATTCAAGTTCGCCA 120 Query 121 GATGGG-C-CA--CA--G-T--CATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAG 171 |||||| | || || | | |||| |||||||||||||||||||||||||| ||||| Sbjct 121 GATGGGGCACAGTCATCGATGGCATCCAAGAACATTGTGTCAGAAAGGAACAGAAGGAAA 180 Query 172 AAGCTCAATGAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 231 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAGGTCAATGAGAGGCTATTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 240 Query 232 AAAGCCTCAATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGG 291 ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| Sbjct 241 AAAGCCTCAATAATCAAAGATGCAATTGATTATATTCAAAATTTGCACGAACAAGAGAGA 300 Query 292 AGAATTCGAGCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATAACGATGTT 351 ||||||||||||||||||| |||||| ||||||||||| ||||||||| ||| ||||||| Sbjct 301 AGAATTCGAGCAGAGATATTAGTGCTGGAATCTGGAAGGTCAAAGAAGAATAGCGATGTT 360 Query 352 GAATTTGATCAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAACTTGAGCAG 411 ||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct 361 GAATTTGATCAGGATGGGAGCTTTGATTCAAAGGCAAAAAGATCAAAAAGACTTGAGCAA 420 Query 412 CAGTATGGATATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCTTCCCCTGTT 471 |||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct 421 AAGTATGAATATGATTCTTCTGGATCAACTACAAGATCATCACCATCATCTTTCCCTGTT 480 Query 472 GATGTGCTTGAGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTGGTGAGCCTCACA 531 ||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||| Sbjct 481 GATGTTCTTGAGTTGAGGGTATCTTCAATGGGAGAGAATACAGTGGTGGTGAGCCTCACT 540 Query 532 TGCAGCAAAAGAAGAGACACAATGATAAAAGTTTGTGAGGTTTTTGAATCTTTGAATGTC 591 ||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||| || Sbjct 541 TGCAGCAAAAGAACAGACACAATGATAAAAGTGTGTGAAGTCTTTGAATCTTTGAATATC 600 Query 592 AAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGACTTCTCAAGACAGCTTTCATC 651 ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 601 AAAATAATTAGCGCAAATATCACCGCTTTCTCTGGGAGGCTTCTCAAGACAGCTTTCATT 660 Query 652 GAGG 655 |||| Sbjct 661 GAGG 664 >Capana01g000441 BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1 Length=582 Score = 765 bits (414), Expect = 0.0 Identities = 471/497 (95%), Gaps = 10/497 (2%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAGAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATATTATGATTCAAGCTCGCCG 120 Query 121 GA-TGGGC-CA--CA--G-T--CATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAG 171 || |||| || || | | |||||||||||||| ||||||||||||||||||||||| Sbjct 121 GAAGGGGCACATTCATCGATGGCATCGAAGAACATTATGTCAGAAAGGAACAGGAGGAAG 180 Query 172 AAGCTCAATGAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAGCTCAATGAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 240 Query 232 AAAGCCTCAATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGG 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AAAGCCTCAATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGG 300 Query 292 AGAATTCGAGCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATAACGATGTT 351 |||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| Sbjct 301 AGAATTCGAGCAGAGATATCAGTGCTTGAATCTGGAAGGTCAAAGAAGAATAGCGATGTT 360 Query 352 GAATTTGATCAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAACTTGAGCAG 411 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 361 GAATTTGATCAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAGACTTGAGCAG 420 Query 412 CAGTATGGATATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCTTCCCCTGTT 471 ||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct 421 CAGTATGACTATGATTCTTCAGAATCGACTACAAAATCATCACCATCCTCTTCCCCTATT 480 Query 472 GATGTGCTTGAG-TTGA 487 ||||| |||||| |||| Sbjct 481 GATGTTCTTGAGGTTGA 497 Score = 134 bits (72), Expect = 1e-30 Identities = 86/93 (92%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 652 GAGGCTGATGAAGAAGAGAGTGATATTTTGAAGTTGAGGATTCAAAGTGCTATAGCTTCT 711 |||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 490 GAGGTTGATAAGGAAGAGAGTGATATTTTGAAGTTGAGGATTGAAAGTGCTATAGCTTCT 549 Query 712 CTAAATGATCCACATAGCCCTATGAGCTCTTAG 744 ||||||||||||||||||||| || |||| ||| Sbjct 550 CTAAATGATCCACATAGCCCTTTGGGCTCATAG 582 >Capana08g000254 AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2 Length=1788 Score = 75.0 bits (40), Expect = 7e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 135 ATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTCAATGAGAGGCTCTTTGC 194 ||| |||||| || || | ||||| || ||||||||||| || ||||| ||||| | ||| Sbjct 990 ATCCAAGAACCTTATGGCGGAAAGAAAAAGGAGGAAGAAACTAAATGAAAGGCTTTATGC 1049 Query 195 ACTTAGAGCTGTGGT-CCCAAACATAAGCAAGATGGATAAAGCCTCAATAATCAAAGATG 253 ||||||||| |||| |||||| || |||| |||||| ||| || || | ||||| Sbjct 1050 TCTTAGAGCTTTGGTTCCCAAA-ATTTCCAAGTTGGATAGAGCTTCTATCCTTGGAGATG 1108 Query 254 CAATTGAGTAT 264 | ||||| ||| Sbjct 1109 CTATTGAATAT 1119 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25270228526 Database: Capsicum annuum zunla Genome CDS (v2.0) Posted date: Mar 21, 2024 3:56 PM Number of letters in database: 36,029,754 Number of sequences in database: 35,336 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5