BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1554 Score E Sequences producing significant alignments: (Bits) Value Solyc03g114940.3.1 259 4e-68 Solyc10g009310.4.1 69.4 6e-11 >Solyc03g114940.3.1 Length=1551 Score = 259 bits (140), Expect = 4e-68 Identities = 869/1218 (71%), Gaps = 62/1218 (5%) Strand=Plus/Plus Query 251 CGTTGATGGCGTTCTCAGTTGGGTTTTCGCGTTTCGTTATCTCTAGTGAACCGGAGACGG 310 |||| |||||||| |||||||||||| | ||||| | || |||||| | || || || | Sbjct 257 CGTTAATGGCGTTTTCAGTTGGGTTTACTCGTTTTATAATATCTAGTAATCCTGAAACTG 316 Query 311 CTAAAGAGAT-TTTGAGCAGCTCTGCTTTTGCTGACCGGCCGGTTAAGGAGTCAGCTTAC 369 | || || || ||| | ||||| ||||||||||| | || || |||||||| ||||| Sbjct 317 CGAAGGAAATACTTG-GTAGCTCGGCTTTTGCTGATAGACCAGTGAAGGAGTCTGCTTAT 375 Query 370 GAGCTTTTGTTTCACCGTGCCATGGGATTCGCACCGTATGGTGAGTATTGGAGGAATCTG 429 || || ||||||||| | || ||||| || ||||||||||||||||||||||||||| || Sbjct 376 GAACTGTTGTTTCACAGAGCGATGGGTTTTGCACCGTATGGTGAGTATTGGAGGAATTTG 435 Query 430 AGGAGAATCTCCTCCACTCATCTTTTCAGTCC-AAGAAGAATCGCGAGTTTTGAGGGTGT 488 || || || ||| | || ||| | |||||||| ||| ||||| ||| |||| | | | | Sbjct 436 AGAAGGATTTCCGCGACCCATTTGTTCAGTCCGAAG-AGAATAGCGTGTTTCGGTGATTT 494 Query 489 TAG-AGTTGGCATCGGTATGAAGATGGTCAAGAAGATTAAAAGCCTTGTTACGTCTGATG 547 || || | || |||| |||||||| | | | ||| || ||| | | || Sbjct 495 CAGGAG-GGAAATAGGTAGTAAGATGGTGACGGAAATTGCGAGT-TTGAT--G---GAAA 547 Query 548 CTTGTGGTGAAGTTGAAGTGAAAAAGATCGTTCACTTTGGTTCTTTGAATAATGTAATGA 607 | ||| | ||| | ||||||| | | | || ||||| || | || ||||| |||| Sbjct 548 CCGATGGACATGTTAAGGTGAAAAGGGTTTTGCATTTTGGGTCACTCAACAATGTGATGA 607 Query 608 CGACAGTGTTTGGTGAAAGCTACGATTTTGATGAAGTTAATGGAAAAGGGTGTTTTTTGG 667 ||| || || ||| ||| || ||||| |||||| ||||| ||| ||| || Sbjct 608 AGACTGTTTTCGGTAAAACTTATGATTTCCATGAAGAAGATGGAC--GGGAGTT----GG 661 Query 668 AGAGGCTGGTGAGTGAAGGCTACGAGTTGCTTGGGATTTTTAACTGGAGTGATCACTTTT 727 || |||| |||||||| || || ||||||| || ||||||||||| || || |||| Sbjct 662 AGTATTTGGTTAGTGAAGGGTATGAACTGCTTGGTATATTTAACTGGAGCGACCA-TTTT 720 Query 728 GGTTTCTTCGT-TGGTTTGACTTCCAAGGAGTGAGGAAGAGG-TGTAGAG--CTT-TGGT 782 ||| || | ||||| || || |||||||| || |||| | || | || ||| | | Sbjct 721 CCTTTGTTGGGGTGGTTAGATTTACAAGGAGTAAG-AAGAAGATGCAAAGAACTTGTTG- 778 Query 783 CTCTGAAGTCAACACTTTTGTCGGCGGA-ATAATTGAGAAACACAAGATGAAGAAGGGTA 841 ||| | || || || ||||| || | | || ||||| |||||| | | || | | || Sbjct 779 CTCGG--GTTAATACATTTGTTGG-GAAGATCATTGAAGAACACAGGTTAAATA-GAGTT 834 Query 842 ATAA-T-CTC-AA-TG--G-AGAGGAA-A-----ATGACTTCGTTGATGTCTTGCTTGGC 888 |||| | || || || | ||| ||| | |||| || |||||||| ||||||| Sbjct 835 ATAAATGCTGGAAATGCTGCAGATGAAGACTTTCATGATTTTGTTGATGTGTTGCTTGAT 894 Query 889 TTGCAAAAGGATGA-AAAGTTGTCTGATTCTGACATGATTGCTGTTCTTTGGGAAATGAT 947 ||| | ||||| | ||| | |||||| ||||||||||||||||||||||||||||| Sbjct 895 TTGGAGAAGGAAAATAAACTCAG-TGATTCAGACATGATTGCTGTTCTTTGGGAAATGAT 953 Query 948 ATTTAGAGGGACAGATACAGTTGCGATTCTAGTGGAATGGGTGCTTGCAAGAATGGTTTT 1007 ||| ||||||| ||||| || || ||| | | || ||| | |||||||| ||||| | Sbjct 954 CTTTCGAGGGACCGATACTGTGGCCATTTTGTTAGAGTGGATTCTTGCAAGGATGGTACT 1013 Query 1008 GCATCAAGACATCCAAGATAAACTCTACAGAGAGATAGCTTCTGCTACAAGT---AACAA 1064 ||||| ||| || ||| |||| | | || || || | | | ||| |||| ||| Sbjct 1014 GCATCCAGATATTCAAACTAAAGT-T-CAAAGTGAAATCGAC-GCTG-AAGTTGGAACCG 1069 Query 1065 TATTAGATCCTTGTCTGATTCCGACATCCCAAAACTGCCGTACCTTCAAGCTATTGTCAA 1124 || || | | | |||||||||| | || || |||| ||| || ||||| || || || Sbjct 1070 -ATC-GAGCTGTATGTGATTCCGACTTGCCTAATCTGCAGTATCTACAAGCCATAGTGAA 1127 Query 1125 AGAAACCCTAAGGCTCCACCCCCCTGGTCCACTTCTCTCTTGGGCTCGTCTCGCTATCCA 1184 ||| || | || | ||||| ||||||||| | ||||| ||||| | || ||||| || Sbjct 1128 AGAGACTTTGAGAGTTCACCCTCCTGGTCCATTACTCTCGTGGGCAAGGCTTGCTATTCA 1187 Query 1185 TGACGTCCAC-GTAGGTCCTAACCTTGTCCCTGCTGGAACCATAGCTATGGTCAACATGT 1243 ||| | | || |||| | || ||||||||||||| | ||| ||||| ||||||| Sbjct 1188 TGA-TACTAGTGTTGGTCACCATTTTATCCCTGCTGGAACTACAGCAATGGTGAACATGT 1246 Query 1244 GGTCCATCACACACAACGCTAAAATCTGGAC-CGACCCTGAAGCGTTTATGCCTGAAAGG 1302 || | || || || | | || || ||| | | |||| |||| ||||||||||||||| Sbjct 1247 GGGCTATTACCCATGATGAAAAGATATGGTCACAACCC-GAAGAATTTATGCCTGAAAGG 1305 Query 1303 TTCATTAGT-GAGGATGTGAGCATCATGGGCTCGGATCTTAGATTGGCTCCATTCGGATC 1361 ||| || | || ||||| ||||||||| || ||| | || | || |||||||| || Sbjct 1306 TTC-TTGGAAGAAGATGTATCCATCATGGGTTCTGATTTAAGGCTTGCACCATTCGGTTC 1364 Query 1362 CGGTCGTCGGGTTTGTCCCGGTAAAGCAATGGGTCTAGCTACTGTTCATCTCTGGATTGG 1421 || || | || || || || || |||||||| || ||||||||||| || ||| | | Sbjct 1365 AGGGCGGAGAGTGTGCCCGGGCAAGGCAATGGGACTTGCTACTGTTCAGCTTTGGCTAGC 1424 Query 1422 TCAACTAATTCA-GAATT 1438 ||| || |||| ||||| Sbjct 1425 TCAGTTACTTCAAGAATT 1442 >Solyc10g009310.4.1 Length=1632 Score = 69.4 bits (37), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 918 TGACATGATTGCTGTTCTTTGGGAAATGATATTTAGAGGGACAGATACAGTTGCG 972 |||||||||||| || |||||||||||||||||||| ||||| ||||| || ||| Sbjct 984 TGACATGATTGCAGTACTTTGGGAAATGATATTTAGGGGGACTGATACGGTAGCG 1038 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52116496840 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5