BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1031 Score E Sequences producing significant alignments: (Bits) Value Solyc02g032950.3.1 1273 0.0 Solyc02g080890.3.1 370 1e-101 Solyc07g051840.4.1 244 7e-64 Solyc06g070990.3.1 108 9e-23 Solyc01g104550.3.1 104 1e-21 Solyc05g007110.2.1 87.9 1e-16 Solyc03g113120.4.1 80.5 2e-14 >Solyc02g032950.3.1 Length=1515 Score = 1273 bits (689), Expect = 0.0 Identities = 689/689 (100%), Gaps = 0/689 (0%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 886 Query 136 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 887 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 946 Query 196 CAATTTTGAATACAACTTATGAGGGTACACACAACCACCCTCTACCACCAGCGGCTATGG 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 947 CAATTTTGAATACAACTTATGAGGGTACACACAACCACCCTCTACCACCAGCGGCTATGG 1006 Query 256 CTATGGCATCGACTACATCAGCTGCAGCAAATATGTTGCTATCAGGTTCGATGTCAAGTG 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1007 CTATGGCATCGACTACATCAGCTGCAGCAAATATGTTGCTATCAGGTTCGATGTCAAGTG 1066 Query 316 CAGATGGTGTGTTAATGAATCCGAATTTCCTAGCTAGGACTATGCTTCCATGTTCGTCAA 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1067 CAGATGGTGTGTTAATGAATCCGAATTTCCTAGCTAGGACTATGCTTCCATGTTCGTCAA 1126 Query 376 GTATGGCGACTATTTCAGCATCAGCTCCGTTTCCCACTGTAACATTGGACCTAACTCAAA 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1127 GTATGGCGACTATTTCAGCATCAGCTCCGTTTCCCACTGTAACATTGGACCTAACTCAAA 1186 Query 436 ATCAAAACTCGTTGACTTATAATCAAAGAAGTACTCAAATTTCTCAATTTCAAGTTCCTT 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1187 ATCAAAACTCGTTGACTTATAATCAAAGAAGTACTCAAATTTCTCAATTTCAAGTTCCTT 1246 Query 496 TCCAATCGAGCCCTCAACATCCGAACTTTATTACATCAATGCCACCACCACCAATGCCTC 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1247 TCCAATCGAGCCCTCAACATCCGAACTTTATTACATCAATGCCACCACCACCAATGCCTC 1306 Query 556 AGGTTTTACATAACCAATCAAAGTTTTCAGGCCTACAAATTTCTCAAGACATTCATCATC 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1307 AGGTTTTACATAACCAATCAAAGTTTTCAGGCCTACAAATTTCTCAAGACATTCATCATC 1366 Query 616 CTCAACAATTACAACATGTTCAAAACCACCAATCATTTTCCGACACGCTCACCGCCGCCA 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1367 CTCAACAATTACAACATGTTCAAAACCACCAATCATTTTCCGACACGCTCACCGCCGCCA 1426 Query 676 CTGCTGCCATAACGGCCGATCCCAATTTCACTGCCGCGCTGGCCGCGGCAATCTCGTCCA 735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1427 CTGCTGCCATAACGGCCGATCCCAATTTCACTGCCGCGCTGGCCGCGGCAATCTCGTCCA 1486 Query 736 TAATTACTGGTCCTGGAAAAGAACAGTAG 764 ||||||||||||||||||||||||||||| Sbjct 1487 TAATTACTGGTCCTGGAAAAGAACAGTAG 1515 >Solyc02g080890.3.1 Length=1653 Score = 370 bits (200), Expect = 1e-101 Identities = 316/372 (85%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 ||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| | Sbjct 899 GGAGAAAATATGGTCAGAAAATGGCAAAAGGCAATCCATGTCCACGTGCTTATTATCGTT 958 Query 136 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 195 ||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct 959 GCACTATGGCTGTTGGTTGTCCAGTCCGAAAACAGGTGCAAAGGTGTGCGGAGGACAGGT 1018 Query 196 CAATTTTGAAT-ACAACTTATGAGGGTACACACAACCACCCTCTACCACCAGCGGCTATG 254 | || || ||| ||||| || || ||||||||||||||||| |||||||||| || ||| Sbjct 1019 CGATCTT-AATAACAACATACGAAGGTACACACAACCACCCATTACCACCAGCAGCCATG 1077 Query 255 GCTATGGCATCGACTACATCAGCTGCAGCAAATATGTTGCTATCAGGTTCGATGTCAAGT 314 ||||||||||| || ||||| || |||||||| |||||||| || ||||| ||| ||||| Sbjct 1078 GCTATGGCATCTACAACATCTGCAGCAGCAAACATGTTGCTCTCTGGTTCCATGCCAAGT 1137 Query 315 GCAGATGGTGTGTTAATGAATCCGAATTTCCTAGCTAGGACTATGCTTCCATGTTCGTCA 374 || ||||| | |||||||| | ||||||||||| || | |||||||||||||| ||| Sbjct 1138 GCTGATGG-GC--TAATGAATACAAATTTCCTAGCAAGAGCAATGCTTCCATGTTCATCA 1194 Query 375 AGTATGGCGACTATTTCAGCATCAGCTCCGTTTCCCACTGTAACATTGGACCT-A-A-CT 431 | ||||| ||||||||||| ||||| || ||||| ||||| ||||| ||||| | | | Sbjct 1195 AACATGGCAACTATTTCAGCTTCAGCCCCATTTCCTACTGTCACATTAGACCTCACAGCC 1254 Query 432 CAAAATCAAAAC 443 ||||||| |||| Sbjct 1255 CAAAATCCAAAC 1266 >Solyc07g051840.4.1 Length=1983 Score = 244 bits (132), Expect = 7e-64 Identities = 284/359 (79%), Gaps = 3/359 (1%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 || |||| ||||| ||||||||||| || || || || || |||||||||||||| || | Sbjct 1163 GGCGAAAGTATGGGCAGAAAATGGCTAAGGGAAACCCGTGCCCTCGAGCTTATTACCGGT 1222 Query 136 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 195 |||| ||||| | |||||| ||||| || || || |||||||| ||||| |||||||| | Sbjct 1223 GCACCATGGCAGCTGGTTGTCCAGTTCGGAAGCAAGTTCAAAGATGTGCAGAGGACAGAA 1282 Query 196 CAATTTTGAATACAACTTATGAGGGTACACACAACCACCCTCTACCACCAGCGGCTATGG 255 |||| |||| ||||||||||| ||||| |||||||| || | || || || || || | Sbjct 1283 CAATCTTGATCACAACTTATGAAGGTACTCACAACCATCCGTTGCCTCCGGCAGCCATAG 1342 Query 256 CTATGGCATCGACTACATCAGCTGCAGCAAATATGTTGCTATCAGGTTCGATGTCAAGTG 315 | ||||| ||||| || || | ||||| || |||||||| || || || ||| |||||| Sbjct 1343 CGATGGCCTCGACAACTTCCTCAGCAGCGAAAATGTTGCTCTCGGGCTCTATGCCAAGTG 1402 Query 316 CAGATGGTGTGTTAATGAATCCGAATTTCCTAGCTAGGACTATGCTTCCATGTTCGTCAA 375 ||||||| | |||||||| | |||||| | || || ||| | ||||| || || || | Sbjct 1403 CAGATGG---GCTAATGAATTCCAATTTCTTCGCGAGAACTCTCCTTCCTTGCTCTTCCA 1459 Query 376 GTATGGCGACTATTTCAGCATCAGCTCCGTTTCCCACTGTAACATTGGACCTAACTCAA 434 | ||||| || |||||||| || || ||||| || ||||| |||||||||||||||||| Sbjct 1460 GCATGGCCACAATTTCAGCCTCGGCCCCGTTCCCTACTGTTACATTGGACCTAACTCAA 1518 >Solyc06g070990.3.1 Length=1950 Score = 108 bits (58), Expect = 9e-23 Identities = 124/157 (79%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 ||||||||||||| || ||||| || ||||| |||||||| ||| ||||||| ||||| | Sbjct 851 GGAGAAAATATGGTCAAAAAATAGCAAAAGGAAATCCATGCCCTAGAGCTTACTATCGTT 910 Query 136 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 195 |||| | || ||||||||| |||| ||||||||||| ||||| || |||| | Sbjct 911 GCACCGTAGCACCAAATTGCCCAGTTAGAAAGCAGGTTCAAAGATGTGCCGAAGACATGT 970 Query 196 CAATTTTGAATACAACTTATGAGGGTACACACAACCA 232 |||| |||| || || ||||| || ||||||||||| Sbjct 971 CAATATTGATCACCACATATGAAGGAACACACAACCA 1007 >Solyc01g104550.3.1 Length=1428 Score = 104 bits (56), Expect = 1e-21 Identities = 160/211 (76%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCC-A--TGTCCTCGAGCTTATTATC 132 ||||||||||||| |||||||| || ||||| | ||| | |||||| | ||||| |||| Sbjct 692 GGAGAAAATATGGTCAGAAAATTGCTAAAGGAAGTCCTAATTGTCCTAGGGCTTACTATC 751 Query 133 GCTGCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACA 192 | ||||| |||| ||||| ||||| |||||||||| ||||| ||| ||||||| Sbjct 752 GTTGCACGGTGGCGCCCGGTTGTCCAGTTAGAAAACAGGTACAAAGATGTTTGGAGGACA 811 Query 193 GGACAATTTTGAATACAACTTATGAGGGTACACACAACCACCCTCTACCACCAGCGGCTA 252 | | || |||| |||||| ||||| || ||||| || || || || ||| || || | Sbjct 812 TGTCGATATTGATTACAACATATGAAGGAACACATAATCATCCACTTCCAGTAGGTGCAA 871 Query 253 TGGCTATGGCATCGACTACATCAGCTGCAGC 283 || |||||||| || ||||||| ||||| Sbjct 872 CAGCAATGGCATCAACAGCATCAGCAGCAGC 902 >Solyc05g007110.2.1 Length=1179 Score = 87.9 bits (47), Expect = 1e-16 Identities = 129/169 (76%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 |||||||||||||||| ||||| || ||||| |||||||| ||| | ||||| ||||| | Sbjct 575 GGAGAAAATATGGACAAAAAATAGCTAAAGGGAATCCATGCCCTAGGGCTTACTATCGTT 634 Query 136 GCAC--TATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAG 193 |||| | | | | | ||||||| | |||||||||||||| ||| || | |||| Sbjct 635 GCACCGTCTCCCCCTCA-T-GCCCAGTCAGGAAACAGGTTCAAAGATGTTCTAAAGACAC 692 Query 194 GACAATTTTGAATACAACTTATGAGGGTACACACAACCACCCTCTACCA 242 | | ||||||| || || ||||| || ||||| || ||||| || ||| Sbjct 693 GTCCATTTTGACCACTACATATGAAGGAACACATAATCACCCCCTTCCA 741 >Solyc03g113120.4.1 Length=1593 Score = 80.5 bits (43), Expect = 2e-14 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 76 GGAGAAAATATGGACAGAAAATGGCGAAAGGCAATCCATGTCCTCGAGCTTATTATCGCT 135 |||||||||||||||| ||||| || ||||| || ||||||||| ||||||| || || | Sbjct 740 GGAGAAAATATGGACAAAAAATTGCAAAAGGGAACCCATGTCCTAGAGCTTACTACCGTT 799 Query 136 GCACTATGGCTGTTGGTTGCCCAGTACGAAAACAGGTTCAAAGGTGTGCTGAGGACAGGA 195 |||| | || |||||| ||| |||||||||| ||||| || | | |||| | Sbjct 800 GCACGGTAGCACCAAATTGCCCCGTAAGAAAACAGGTACAAAGATGCATTCAAGACATGT 859 Query 196 CAATTTTGAATACAACTTATGAGGGTACACACAACCA 232 | || |||| ||||| || || || ||||| ||||| Sbjct 860 CTATATTGATCACAACATACGAAGGAACACATAACCA 896 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34346580380 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5