BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato Genome cDNA (ITAG release 2.40)
           34,725 sequences; 41,981,568 total letters



Query= Untitled_sequence

Length=51
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc01g099010.2GDSL esterase/lipase At1g28590 (AHRD V1 **** GDL8...  95.3    3e-20
Solyc01g099030.2GDSL esterase/lipase At1g28590 (AHRD V1 **** GDL8...  76.8    9e-15


>Solyc01g099010.2 GDSL esterase/lipase At1g28590 (AHRD V1 **** GDL8_ARATH); contains 
Interpro domain(s)  IPR001087  Lipase, GDSL 
Length=1443

 Score = 95.3 bits (51),  Expect = 3e-20
 Identities = 51/51 (100%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  1     CCCGAATACTCACATCAGTTGGGATGGAATTCATTTTACACAAAATGCATA  51
             |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1091  CCCGAATACTCACATCAGTTGGGATGGAATTCATTTTACACAAAATGCATA  1141


>Solyc01g099030.2 GDSL esterase/lipase At1g28590 (AHRD V1 **** GDL8_ARATH); contains 
Interpro domain(s)  IPR001087  Lipase, GDSL 
Length=1568

 Score = 76.8 bits (41),  Expect = 9e-15
 Identities = 47/50 (94%), Gaps = 0/50 (0%)
 Strand=Plus/Plus

Query  2     CCGAATACTCACATCAGTTGGGATGGAATTCATTTTACACAAAATGCATA  51
             |||| |||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct  1290  CCGAGTACTCACATCAGTTGGGATGGAGTTCATTTGACACAAAATGCATA  1339



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 1237570290


  Database: Tomato Genome cDNA (ITAG release 2.40)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 41,981,568
  Number of sequences in database:  34,725



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5