BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Niben261_genome.fasta 17,639 sequences; 3,035,611,412 total letters Query= Untitled_sequence Length=930 Score E Sequences producing significant alignments: (Bits) Value Niben261Chr10 1186 0.0 Niben261Chr13 1153 0.0 Niben261Chr08 200 1e-48 Niben261Chr01 183 1e-43 >Niben261Chr10 Length=138251820 Score = 1186 bits (642), Expect = 0.0 Identities = 834/930 (90%), Gaps = 0/930 (0%) Strand=Plus/Minus Query 1 ATGGCCGGAAGTGGTGTCGTTACAGTTTACGGAAATGGTGCTCTCACAGAGACAACCAAG 60 ||||||||||| ||||| || ||| |||||||||||||||| ||||| ||||| || ||| Sbjct 109554148 ATGGCCGGAAGCGGTGTGGTAACACTTTACGGAAATGGTGCACTCACCGAGACTACAAAG 109554089 Query 61 CAATCCCCCTTCTCTGTGAAAGTGGGTCTCGCTCAGATGCTTCGGGGAGGCGTTATCATG 120 |||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 109554088 CAATCCCCTTTCTCAGTGAAAGTGGGTCTCGCTCAGATGCTTCGCGGCGGCGTTATCATG 109554029 Query 121 GACGTTGTTAATGCTGAACAGGCTCGTATAGCCGAGGAGGCCGGTGCGTGTGCTGTCATG 180 ||||| || ||| | || ||||| ||||||||||||||||| || |||||||| |||||| Sbjct 109554028 GACGTCGTCAATCCCGAGCAGGCCCGTATAGCCGAGGAGGCAGGCGCGTGTGCCGTCATG 109553969 Query 181 GCTCTTGAGCGTGTCCCTGCTGATATACGCGCTCAGGGCGGCGTTGCACGTATGTCGGAT 240 || |||||||| ||||| |||||||||||||||||||||||||| || || ||||||||| Sbjct 109553968 GCCCTTGAGCGCGTCCCCGCTGATATACGCGCTCAGGGCGGCGTAGCCCGCATGTCGGAT 109553909 Query 241 CCCCAGCTTATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGT 300 |||||||||||||||||||||||||||||||| || || || |||||||||||||| ||| Sbjct 109553908 CCCCAGCTTATCAAAGAAATCAAACAGGCTGTTACCATCCCCGTTATGGCCAAGGCCCGT 109553849 Query 301 ATTGGTCATTTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGAA 360 || ||||| ||||| ||||| |||||||| |||||||| |||||||||||||| |||||| Sbjct 109553848 ATCGGTCACTTCGTCGAGGCCCAAATCCTCGAGGCTATCGGAATCGATTACGTGGATGAA 109553789 Query 361 TCGGAGGTGCTTACCCTTGCTGACGATGAGAACCACATCAACAAGCACAATTTCCGTATC 420 || || || || || || || ||||||||||||||||||||||||||||||||||| || Sbjct 109553788 TCAGAAGTCCTCACTCTCGCCGACGATGAGAACCACATCAACAAGCACAATTTCCGCATT 109553729 Query 421 CCCTTTGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCT 480 || |||||||||||||||||||| | || || || || ||||||||| | ||||| || Sbjct 109553728 CCTTTTGTCTGTGGCTGCCGTAACCTCGGCGAAGCCCTCCGCCGTATCAGGGAGGGAGCC 109553669 Query 481 GCCATGATTCGGACCAAGGGGGAAGCTGGTACCGGAAACATTATCGAGGCTGTTCGTCAT 540 |||||||| || |||||||||||||| |||||||| ||||| ||||| || || ||||| Sbjct 109553668 GCCATGATACGCACCAAGGGGGAAGCCGGTACCGGCAACATCATCGAAGCCGTCCGTCAC 109553609 Query 541 GTGCGTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGATGAGGTTTTC 600 ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 109553608 GTGCGTTCCGTGATGGGTGATATCAGGGTGCTGCGAAACATGGATGATGATGAGGTTTTC 109553549 Query 601 ACCTTTGCTAAGAAGATTCAGGCACCATACGATCTGGTGATGCAAACAAAGCAACTTGGT 660 || |||||||||||| |||||||||| ||||| ||||||||||||||||| || ||||| Sbjct 109553548 ACTTTTGCTAAGAAGCTTCAGGCACCGTACGACCTGGTGATGCAAACAAAACAGCTTGGA 109553489 Query 661 AGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCTT 720 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 109553488 AGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCTACACCAGCAGACGCAGCGCTT 109553429 Query 721 ATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGGTTCTGGTATCTTCAAGAGTGGTGAC 780 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 109553428 ATGATGCAGTTGGGATGTGACGGAGTGTTCGTGGGTTCTGGAATTTTCAAGAGTGGTGAC 109553369 Query 781 CCTGCAAAGAGGGGACGTGCCATCGTGCAAGCAGTGACTCATTACAGTGACCCACAATTG 840 ||||| || |||||||| || ||||||||||| ||||||||||||||||||||| | || Sbjct 109553368 CCTGCCAAAAGGGGACGCGCTATCGTGCAAGCCGTGACTCATTACAGTGACCCAGGACTG 109553309 Query 841 CTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATCAATCTTGATGAAAAG 900 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 109553308 CTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATTAATCTTGATGATAAG 109553249 Query 901 GTGGAGAGGTATGCCAATCGTTCTGAGTGA 930 ||||| |||||||| ||||||||||||||| Sbjct 109553248 GTGGAAAGGTATGCTAATCGTTCTGAGTGA 109553219 >Niben261Chr13 Length=153652170 Score = 1153 bits (624), Expect = 0.0 Identities = 828/930 (89%), Gaps = 0/930 (0%) Strand=Plus/Plus Query 1 ATGGCCGGAAGTGGTGTCGTTACAGTTTACGGAAATGGTGCTCTCACAGAGACAACCAAG 60 ||||||||||| ||||| || ||| |||||||||||||||| ||||| ||||| || ||| Sbjct 105170081 ATGGCCGGAAGCGGTGTGGTAACACTTTACGGAAATGGTGCACTCACCGAGACTACAAAG 105170140 Query 61 CAATCCCCCTTCTCTGTGAAAGTGGGTCTCGCTCAGATGCTTCGGGGAGGCGTTATCATG 120 |||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 105170141 CAATCCCCTTTCTCAGTGAAAGTGGGTCTCGCTCAGATGCTTCGCGGCGGCGTTATCATG 105170200 Query 121 GACGTTGTTAATGCTGAACAGGCTCGTATAGCCGAGGAGGCCGGTGCGTGTGCTGTCATG 180 ||||| || ||||| || ||||| |||||||| |||||||| || |||||||| |||||| Sbjct 105170201 GACGTCGTCAATGCCGAGCAGGCCCGTATAGCTGAGGAGGCAGGCGCGTGTGCCGTCATG 105170260 Query 181 GCTCTTGAGCGTGTCCCTGCTGATATACGCGCTCAGGGCGGCGTTGCACGTATGTCGGAT 240 || |||||||| ||||| |||||||||||||||||||||||||| || || ||||||||| Sbjct 105170261 GCCCTTGAGCGCGTCCCCGCTGATATACGCGCTCAGGGCGGCGTAGCCCGCATGTCGGAT 105170320 Query 241 CCCCAGCTTATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGT 300 ||||||||||||||||||||||||||||| || || || || |||||||||||||| ||| Sbjct 105170321 CCCCAGCTTATCAAAGAAATCAAACAGGCCGTAACCATCCCCGTTATGGCCAAGGCCCGT 105170380 Query 301 ATTGGTCATTTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGAA 360 || ||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct 105170381 ATCGGTCACTTCGTCGAGGCCCAAATCCTCGAGGCTATCGGAATCGATTACGTGGACGAA 105170440 Query 361 TCGGAGGTGCTTACCCTTGCTGACGATGAGAACCACATCAACAAGCACAATTTCCGTATC 420 || || || || || || || ||||||||||||||||||||||||||||||||||| || Sbjct 105170441 TCAGAAGTCCTCACTCTCGCCGACGATGAGAACCACATCAACAAGCACAATTTCCGCATT 105170500 Query 421 CCCTTTGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCT 480 || |||||||||||||||||||| | || || || || ||||||||| | ||||| || Sbjct 105170501 CCTTTTGTCTGTGGCTGCCGTAACCTTGGCGAAGCCCTCCGCCGTATCAGGGAGGGAGCC 105170560 Query 481 GCCATGATTCGGACCAAGGGGGAAGCTGGTACCGGAAACATTATCGAGGCTGTTCGTCAT 540 |||||||| || |||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct 105170561 GCCATGATACGCACCAAGGGGGAAGCCGGTACCGGCAACATCATCGAGGCCGTCCGTCAC 105170620 Query 541 GTGCGTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGATGAGGTTTTC 600 ||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct 105170621 GTGCGTTCCGTGATGGGTGATATCAGGGTGCTACGAAACATGGATGATGATGAGGTTTTC 105170680 Query 601 ACCTTTGCTAAGAAGATTCAGGCACCATACGATCTGGTGATGCAAACAAAGCAACTTGGT 660 || |||||||||||| |||||||||| ||||| ||||| ||||||||||| || || || Sbjct 105170681 ACTTTTGCTAAGAAGCTTCAGGCACCGTACGACCTGGTCATGCAAACAAAACAGCTCGGA 105170740 Query 661 AGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCTT 720 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 105170741 AGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCAACACCAGCAGACGCAGCGCTT 105170800 Query 721 ATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGGTTCTGGTATCTTCAAGAGTGGTGAC 780 ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||| Sbjct 105170801 ATGATGCAGTTGGGATGCGACGGAGTGTTCGTGGGTTCTGGAATTTTCAAGAGTGGTGAC 105170860 Query 781 CCTGCAAAGAGGGGACGTGCCATCGTGCAAGCAGTGACTCATTACAGTGACCCACAATTG 840 ||||| || |||||||| || ||||||||||| |||||||| |||||||||||| | || Sbjct 105170861 CCTGCCAAAAGGGGACGCGCTATCGTGCAAGCCGTGACTCACTACAGTGACCCAGGACTG 105170920 Query 841 CTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATCAATCTTGATGAAAAG 900 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 105170921 CTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATTAATCTTGATGATAAG 105170980 Query 901 GTGGAGAGGTATGCCAATCGTTCTGAGTGA 930 |||||||||||||| |||||||| |||||| Sbjct 105170981 GTGGAGAGGTATGCTAATCGTTCCGAGTGA 105171010 >Niben261Chr08 Length=137820123 Score = 200 bits (108), Expect = 1e-48 Identities = 383/516 (74%), Gaps = 17/516 (3%) Strand=Plus/Minus Query 250 ATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGTATTGGTCAT 309 |||||||| |||||||||||||| ||||||| || ||||| || || || | || ||| Sbjct 8005670 ATCAAAGAGATCAAACAGGCTGTCTCAATTCCCGTAATGGCAAAAGCCCGAGTCGGGCAT 8005611 Query 310 TTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGA-ATCGGAGGT 368 || ||||| || || |||||||| ||||||||| || || || || || | | ||||| Sbjct 8005610 TTTGTGGAAGCCCAGATCCTTGAAGCTATTGGAGCAGACTATGTAGACGAGAGC-GAGGT 8005552 Query 369 GCTTACCCTTGCTGACGATG-AGAACCA--CATCAACAAGCACAATTTCCGTATCCCCTT 425 ||| |||| | ||||| ||| | ||||||||| |||||||||||| ||| || Sbjct 8005551 -TTTAGCCTT--AGGCGATGAAGATCATTTCATCAACAAACACAATTTCCGTGCCCCATT 8005495 Query 426 TGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCTGCCAT 485 |||||||| || || || | || || || | | | ||||||| |||||||| || Sbjct 8005494 CGTCTGTGGGTGTCGAGATCTCGGGGAAGCATTAAGAAGAGTCCGTGAAGGTGCTGCGAT 8005435 Query 486 GATTCGGACCAAGGGGGAAGC--T-GGTACCGGAAACATTATCGAGGCTGTTCGTCATGT 542 |||| ||||| | ||||| | ||||| || || ||| | || | |||||| |||| Sbjct 8005434 GATTAGGACCCAAGGGGATCTATTAGGTACAGGTAATATTGTTGACACAGTTCGTAATGT 8005375 Query 543 GCGTTCCGTTATGGGTGATATCAGGGTGCTGCGC-AACATGGACGATGATGAGGTTTTCA 601 | | || ||||| ||||| || | || | | ||||||||||| ||||||||||||| Sbjct 8005374 GAGGAAAGTGATGGGAGATATTAGACTTCT-CTCAAACATGGACGAAGATGAGGTTTTCA 8005316 Query 602 CCTTTGCTAAGAAGAT-TCAGGCACCATACGATCTGGT-GATGCAAACAAAGCAACTTGG 659 | ||| | |||||||| || || || || ||| | || | | ||||| ||||| | || Sbjct 8005315 CTTTTTCGAAGAAGATCTC-CGCGCCTTATGATATCGTCGCT-CAAACGAAGCAGATGGG 8005258 Query 660 TAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCT 719 ||| || || ||||| || || ||||| ||||| | | ||| || |||||||||||||| Sbjct 8005257 TAGACTTCCGGTGGTACATTTCGCAGCCGGTGGTATTGTGACCCCTGCAGATGCAGCGCT 8005198 Query 720 TATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGG 755 ||||||||| |||| ||||| |||||||| |||| Sbjct 8005197 CATGATGCAGCTGGGTTGTGATGGCGTGTTTTTGGG 8005162 >Niben261Chr01 Length=186295347 Score = 183 bits (99), Expect = 1e-43 Identities = 376/512 (73%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 250 ATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGTATTGGTCAT 309 ||||||| ||||||||||| || ||||||| || ||||| || || || | || ||| Sbjct 107939108 ATCAAAGCGATCAAACAGGCCGTCTCAATTCCCGTAATGGCAAAAGCCCGAGTCGGGCAT 107939049 Query 310 TTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGA-ATCGGAGGT 368 || |||| || || |||||||| ||||||||| || || || || || | | ||||| Sbjct 107939048 TTTCTGGAAGCCCAGATCCTTGAAGCTATTGGAGCAGACTATGTAGACGAGAGC-GAGGT 107938990 Query 369 GCTTACCCTT-GCTGACGATGAGAACCACATCAACAAGCACAATTTCCGTATCCCCTTTG 427 ||| |||| || ||||| || | ||||||||| |||||||||||| ||| || | Sbjct 107938989 -TTTAGCCTTAGCCGACGAAGATCATTTCATCAACAAACACAATTTCCGTGCCCCATTCG 107938931 Query 428 TCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCTGCCATGA 487 ||||||| || || || | || || || | | | ||||||| |||||||| |||| Sbjct 107938930 TCTGTGGGTGTCGAGATCTCGGAGAAGCATTAAGAAGAGTCCGTGAAGGTGCTGCGATGA 107938871 Query 488 TTCGGACCAAGGGGGAAGC--T-GGTACCGGAAACATTATCGAGGCTGTTCGTCATGTGC 544 || ||||| | || || | ||||| || || ||| | || | ||||| ||||| Sbjct 107938870 TTAGGACCCAAGGAGATCTATTAGGTACAGGTAATATTGTGGACACAGTTCGCAATGTGA 107938811 Query 545 GTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGATGAGGTTTTCACCT 604 | || ||||| ||||| || || || ||||||||||| |||||||||||||| | Sbjct 107938810 GGAAAGTGATGGGAGATATTAGAGTTCTATCAAACATGGACGAAGATGAGGTTTTCACTT 107938751 Query 605 TTGCTAAGAAGAT-TCAGGCACCATACGATCTGGTGATGCAAACAAAGCAACTTGGTAGG 663 || | || ||||| || || || || ||| | || |||||| ||||| | ||||| Sbjct 107938750 TTTCAAAAAAGATCTCC-GCGCCTTATGATATCGTTGCGCAAACGAAGCAGATGGGTAGA 107938692 Query 664 CTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCTTATG 723 || || ||||| || |||||||| ||||| | | ||| ||||| ||||||||||| ||| Sbjct 107938691 CTTCCGGTGGTACATTTTGCAGCTGGTGGTATTGTGACCCCAGCTGATGCAGCGCTCATG 107938632 Query 724 ATGCAGTTGGGATGTGACGGCGTGTTCGTGGG 755 |||||| |||| ||||| |||||||| |||| Sbjct 107938631 ATGCAGCTGGGTTGTGATGGCGTGTTTTTGGG 107938600 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 2731574017800 Database: Niben261_genome.fasta Posted date: Jul 1, 2025 1:16 PM Number of letters in database: 3,035,611,412 Number of sequences in database: 17,639 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5