BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (Build SL4.0) 13 sequences; 782,520,033 total letters Query= Untitled_sequence Length=24 Score E Sequences producing significant alignments: (Bits) Value SL4.0ch01 34.4 0.11 SL4.0ch07 32.5 0.38 SL4.0ch05 32.5 0.38 >SL4.0ch01 Length=90863682 Score = 34.4 bits (18), Expect = 0.11 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 7 CTTCAACTTGCCATCAAG 24 |||||||||||||||||| Sbjct 69640279 CTTCAACTTGCCATCAAG 69640296 >SL4.0ch07 Length=67883646 Score = 32.5 bits (17), Expect = 0.38 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 1 TCTCCACTTCAACTTGC 17 ||||||||||||||||| Sbjct 30544829 TCTCCACTTCAACTTGC 30544845 >SL4.0ch05 Length=65269487 Score = 32.5 bits (17), Expect = 0.38 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCTCCACTTCAACTTGCCATCAA 23 ||||||||||| ||| ||||||| Sbjct 50551994 TCTCCACTTCACCTTTCCATCAA 50552016 Score = 32.5 bits (17), Expect = 0.38 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCTCCACTTCAACTTGCCATCAA 23 ||||||||||| ||| ||||||| Sbjct 51661846 TCTCCACTTCACCTTTCCATCAA 51661868 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 2347559280 Database: Tomato genome chromosomes (Build SL4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 782,520,033 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5