BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato Genome cDNA (ITAG release 2.40)
           34,725 sequences; 41,981,568 total letters



Query= Untitled_sequence

Length=561
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc06g005460.1Pectinesterase inhibitor (AHRD V1 ***- PMEI_ACTDE...  1037    0.0  
Solyc01g097660.2Pectinesterase inhibitor (AHRD V1 -**- PMEI_ACTDE...  195     4e-49


>Solyc06g005460.1 Pectinesterase inhibitor (AHRD V1 ***- PMEI_ACTDE); contains 
Interpro domain(s)  IPR006501  Pectinesterase inhibitor 
Length=561

 Score = 1037 bits (561),  Expect = 0.0
 Identities = 561/561 (100%), Gaps = 0/561 (0%)
 Strand=Plus/Plus

Query  1    ATGTTCACATTTTCTTCTTCTTTCTCTCCATTTGACTCAACATTCGTCTTATGTCTAATT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGTTCACATTTTCTTCTTCTTTCTCTCCATTTGACTCAACATTCGTCTTATGTCTAATT  60

Query  61   GTTGCTTCCTTAATAACACCAATCAGAAGTAACTACTTATCTGATGTGTGCATCAAATCA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   GTTGCTTCCTTAATAACACCAATCAGAAGTAACTACTTATCTGATGTGTGCATCAAATCA  120

Query  121  AAGAGTCCAAAATTTTGCTTGCGAGTCTTTGGCCCAAATCCTCATAGAAGTCCTTATGAG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AAGAGTCCAAAATTTTGCTTGCGAGTCTTTGGCCCAAATCCTCATAGAAGTCCTTATGAG  180

Query  181  TTGACACAAGAGGCCATCAACTTAGCATTGAGAAACGCGTATGCGATAGCCAATAAGATT  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  TTGACACAAGAGGCCATCAACTTAGCATTGAGAAACGCGTATGCGATAGCCAATAAGATT  240

Query  241  GCCATGTTTTACTATGAGACAAACGATAATAACTTGAAAACGATATATAACTATTGTTCG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  GCCATGTTTTACTATGAGACAAACGATAATAACTTGAAAACGATATATAACTATTGTTCG  300

Query  301  GATTATTACCGTAATGCCATTAATGCCCTAAGAGGTGCAAAGGAGAATTTTCGAAAGGAT  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  GATTATTACCGTAATGCCATTAATGCCCTAAGAGGTGCAAAGGAGAATTTTCGAAAGGAT  360

Query  361  GGCTTACGATATAATAGTGTGTATGTTGCTGGAAATTTTGCCCAAAAAGCTAACTTTTAT  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GGCTTACGATATAATAGTGTGTATGTTGCTGGAAATTTTGCCCAAAAAGCTAACTTTTAT  420

Query  421  TGTGAAAATGAGTTTCAAAGAATCATAGGTTATGTTTATGCCTCTACTCTTACAAAAAAC  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  TGTGAAAATGAGTTTCAAAGAATCATAGGTTATGTTTATGCCTCTACTCTTACAAAAAAC  480

Query  481  AATGAGAGGATGGTGAATTTTGGTAGTATTATTGTGGCTGCTGCAGATGTTCTATCTAAT  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  AATGAGAGGATGGTGAATTTTGGTAGTATTATTGTGGCTGCTGCAGATGTTCTATCTAAT  540

Query  541  TCAACATTGGTAGAAAAATAG  561
            |||||||||||||||||||||
Sbjct  541  TCAACATTGGTAGAAAAATAG  561


>Solyc01g097660.2 Pectinesterase inhibitor (AHRD V1 -**- PMEI_ACTDE); contains 
Interpro domain(s)  IPR006501  Pectinesterase inhibitor 
Length=653

 Score = 195 bits (105),  Expect = 4e-49
 Identities = 406/548 (74%), Gaps = 34/548 (6%)
 Strand=Plus/Plus

Query  14   CTTCTTCTTTCTCTCCATTTGACTCAACATTCGTCTTATGTCTAATTGTTGCTTCCTTAA  73
            ||||||| || | |||| ||| ||||||| | ||||||||  ||||| ||||||||||||
Sbjct  52   CTTCTTCATT-T-TCCA-TTGGCTCAACACTAGTCTTATGCATAATTTTTGCTTCCTTAA  108

Query  74   TAACACCAATCAGAAGTAACTACTTATCTGATGTGTGCATCAAATCAAAGAGTCCAAAAT  133
            || ||| ||  |  ||||||| |||  ||||| ||||||||||||   ||||||||| ||
Sbjct  109  TAGCACTAACTACTAGTAACTCCTTGGCTGATTTGTGCATCAAATGCCAGAGTCCAAGAT  168

Query  134  TTTGCTTGCGAGTCTTTGGCCCAAATCCTCATAGAAGTCCTTATGAGTTGACACAAGAGG  193
            ||||||||| ||| |||||||  ||||||||||| | ||||||  ||||||||  |||||
Sbjct  169  TTTGCTTGCAAGTTTTTGGCCTTAATCCTCATAGGAATCCTTACCAGTTGACAGTAGAGG  228

Query  194  CCATCAACTTAGCATTGAGAAACGCGTATGCGATAGCCAATAAGATTGCCATGTTTTACT  253
            | ||  ||||| |||| | |||||| |  |  | | ||||||||||| | ||   || ||
Sbjct  229  CAATACACTTAACATTTACAAACGCCTCCGATACAACCAATAAGATT-C-ATACCTTTCT  286

Query  254  --ATGAGACAAACGATAATAACTTGAAAACGATATATAACTATTGTTCGGATTATTACCG  311
              || ||||||||||  |||||||||||  ||||||||| ||||||| | |||||||  |
Sbjct  287  AGATCAGACAAACGACGATAACTTGAAAGAGATATATAATTATTGTTTGAATTATTAT-G  345

Query  312  TAATGC--C-ATTAATGCCCTAAGAGGTGCAAAGGAGAA-TTTTCGAAAGGATGGCTTAC  367
             || ||  | ||| ||    |||| | |||  ||||| | || |  || | | || | | 
Sbjct  346  -AA-GCTTCTATTGATATTTTAAGTGATGCGGAGGAGCACTTGTT-AAGGCAAGG-T-AT  400

Query  368  GATATAATAGTGTGTATGT-TGCTGGAAATTTTGCCCAAAAAGCTAACTTTTATTGTGAA  426
             |||| ||| | || |    |  ||||   ||||  ||| ||| |   |||| |||||||
Sbjct  401  -ATATGATACTTTG-AGCAATATTGGAGCCTTTGTACAAGAAGTTGGTTTTTCTTGTGAA  458

Query  427  AAT-GAGTTTCAAAGAATCATAGGTTATG-T--TTATGCCTCTACTCTTACA-A-AA-AA  479
             || || |||||| |||  || | | ||| |  ||||| ||| ||||||||  | || ||
Sbjct  459  GATAGA-TTTCAA-GAA--ATTGTTGATGATTCTTATGTCTCCACTCTTACTCAGAACAA  514

Query  480  CAATGAGAGGATGGTGAATTTTGGTAGTATTATTGTGGCTGCTGCAGATGTTCTATCTAA  539
            |||| | |  |||  ||||||||||||||||||| | |||||||   || ||||||||||
Sbjct  515  CAAT-A-AC-ATGAAGAATTTTGGTAGTATTATTATTGCTGCTGGGAATCTTCTATCTAA  571

Query  540  TTCAACAT  547
            ||||||||
Sbjct  572  TTCAACAT  579



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 22096566216


  Database: Tomato Genome cDNA (ITAG release 2.40)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 41,981,568
  Number of sequences in database:  34,725



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5