BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (Build SL4.0) 13 sequences; 782,520,033 total letters Query= Solyc10g081220.1.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value SL4.0ch10 791 0.0 >SL4.0ch10 Length=64792705 Score = 791 bits (428), Expect = 0.0 Identities = 431/432 (99%), Gaps = 1/432 (0%) Strand=Plus/Plus Query 1 ATGGATCATTACAGAGTTTTAGGGTTAACACGAAGTGCGAGCAAGGAAGAAATCAAGCAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444688 ATGGATCATTACAGAGTTTTAGGGTTAACACGAAGTGCGAGCAAGGAAGAAATCAAGCAA 61444747 Query 61 GCGTTTCGGAAATTGGCAATGGAATTTCATCCCGACAAGCACGCACATTCCTCGCATCAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444748 GCGTTTCGGAAATTGGCAATGGAATTTCATCCCGACAAGCACGCACATTCCTCGCATCAC 61444807 Query 121 TTGAAGGAAAACGCTACGCTCAAATTCAAAGAAGTTTCCGAAGCTTACGAGATTCTGATC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444808 TTGAAGGAAAACGCTACGCTCAAATTCAAAGAAGTTTCCGAAGCTTACGAGATTCTGATC 61444867 Query 181 GACGATCGCAAACGCGCTGATTACAATATCCGGTCTAATAGTTACCGGAATTCAGCGAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444868 GACGATCGCAAACGCGCTGATTACAATATCCGGTCTAATAGTTACCGGAATTCAGCGAAT 61444927 Query 241 AATTATGGCGGTAATAGTGACTATTATAATCGTAGTTATCAGAACGGGTATAGAAATAGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444928 AATTATGGCGGTAATAGTGACTATTATAATCGTAGTTATCAGAACGGGTATAGAAATAGC 61444987 Query 301 TACAATTATGGGTATGGGTATAGTCGGCCTGCTGATGCCGGCGGTTCTGCAAGTATTGTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61444988 TACAATTATGGGTATGGGTATAGTCGGCCTGCTGATGCCGGCGGTTCTGCAAGTATTGTT 61445047 Query 361 ACCAAATTCGAGATGGTTCTGCGGTTCATGACGACAAGGGCGTTTCTCCTCAATGCTGCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61445048 ACCAAATTCGAGATGGTTCTGCGGTTCATGACGACAAGGGCGTTTCTCCTCAATGCTGCA 61445107 Query 421 CTTGCCGGTGTA 432 |||||||| ||| Sbjct 61445108 CTTGCCGG-GTA 61445118 Score = 132 bits (71), Expect = 7e-29 Identities = 71/71 (100%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 428 GTGTATTGTTAGGTGCAACATATGTAGTTGATGCAGGTGGGGAGGCACTATGGAAGATGC 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61446724 GTGTATTGTTAGGTGCAACATATGTAGTTGATGCAGGTGGGGAGGCACTATGGAAGATGC 61446783 Query 488 GAAATTCTGGA 498 ||||||||||| Sbjct 61446784 GAAATTCTGGA 61446794 Score = 117 bits (63), Expect = 2e-24 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 499 AAATCGTTTGAAGAAGCAATGGAATCTGTAGAAAAAGCTAAAGCATTTGATGACAAAAGA 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61447160 AAATCGTTTGAAGAAGCAATGGAATCTGTAGAAAAAGCTAAAGCATTTGATGACAAAAGA 61447219 Query 559 TGA 561 ||| Sbjct 61447220 TGA 61447222 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 417082983577 Database: Tomato genome chromosomes (Build SL4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 782,520,033 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5