BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: ITAG BAC-contig-based predicted proteins
           7,128 sequences; 3,088,772 total letters



Query= AT1G72830.1

Length=340
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AP009518_10.1contig:C08.12_contig22 evidence_code:08F0H1E1IEG gen...  172     1e-51
CU928192_11.1contig:C04.11_contig57 evidence_code:08F0H1E1IEG gen...  143     2e-38
AC215403_5.1contig:C02.21_contig14 evidence_code:08F0H1E0IEG gene...  102     2e-24


>AP009518_10.1 contig:C08.12_contig22 evidence_code:08F0H1E1IEG gene_region:286804-295547 
functional_description:"related to NFYA8_ARATH 
Nuclear transcription factor Y subunit A 8 from Arabidopsis 
thaliana; contains InterPro domains:IPR001289:CCAAT-binding 
transcription factor, subunit B;"
Length=325

 Score = 172 bits (435),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 114/267 (43%), Positives = 156/267 (58%), Gaps = 18/267 (7%)

Query  60   QISFQDQDSSSTQSTGQSYTEVASSGDDNPSRQ-ISFSAKSGS--EITQRKGFASNPKQG  116
            +  FQDQDS+ST STGQS    A+ G  N   Q ++     G   E+    G  ++    
Sbjct  60   ECQFQDQDSTSTLSTGQSNHVEAAMGKSNTVLQNVAVHPGWGGTYEVQAESGTNASRSGE  119

Query  117  SMTGF---PNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPA  173
            S T     P ++     A  S+ +AD ++G L+ A Y   A    PQMV +   RV LP 
Sbjct  120  SDTNTLPQPQVNHNHPMACVSYPFADTYFGRLVTA-YGSNA-IIYPQMVGVTSTRVALPL  177

Query  174  ELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGR  233
            E TE+ P++VNAKQY AI++RRQ RAKLEAQNKL++ RKPYLHESRH HA+KR RGSGGR
Sbjct  178  ECTESLPIYVNAKQYSAILKRRQVRAKLEAQNKLVKDRKPYLHESRHRHAMKRARGSGGR  237

Query  234  FLNTKKLLQESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDRS---STTSGSDI  290
            FLNTK  +QES+ ++          + + ++       + M+Q+++  S   ST SGSD+
Sbjct  238  FLNTKN-MQESKPSSPMHD------RNIFKRQAGGNLSSSMVQHSESGSWGTSTQSGSDV  290

Query  291  TSVSDGADIFGHTEFQFSGFPTPINRA  317
            TS+  G ++F   EF+ SGFP  I  A
Sbjct  291  TSIFSGDNMFQQPEFRVSGFPFHIQEA  317


>CU928192_11.1 contig:C04.11_contig57 evidence_code:08F0H1E1IEG gene_region:58277-82246 
functional_description:"hypothetical protein; contains 
InterPro domains:IPR001289:CCAAT-binding transcription 
factor, subunit B; IPR003386:Lecithin:cholesterol acyltransferase; 
IPR009604:LsmAD domain;"
Length=1709

 Score = 143 bits (361),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 86/191 (45%), Positives = 110/191 (58%), Gaps = 16/191 (8%)

Query  126   FAPAQANFS---FHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVF  182
             F   Q NF+   F + DP+Y  L+AA   P       QM+  +  RVPLP +L + +P+F
Sbjct  1503  FDTYQTNFAVVPFPHPDPYYHDLVAAYGNPT--LVQSQMLGTVAPRVPLPLDLKQDEPIF  1560

Query  183   VNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQ  242
             VNAKQY AI+RRRQ RA+LEAQNKL + RKPYLHESRH HAL R RG GGRF+N KK   
Sbjct  1561  VNAKQYQAILRRRQYRARLEAQNKLSKGRKPYLHESRHRHALNRARGPGGRFVNMKK---  1617

Query  243   ESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDRS---STTSGSDITSVSDGADI  299
                      +  D +  Q N+  +  +    ML+ + D+S   ST   S ITS S G  I
Sbjct  1618  -----PGESKSPDLINGQDNQIPDELQLNTKMLERDVDQSGSHSTPFYSAITSGSKGDAI  1672

Query  300   FGHTEFQFSGF  310
             + H  F +S F
Sbjct  1673  YHHQLFNYSAF  1683


>AC215403_5.1 contig:C02.21_contig14 evidence_code:08F0H1E0IEG gene_region:83447-94588 
functional_description:"putative homologous protein 
to Os07g0659800 from Oryza sativa (japonica cultivar-group); 
contains InterPro domains:IPR001289:CCAAT-binding transcription 
factor, subunit B; IPR013032:EGF-like region, conserved 
site; IPR013322:TRAF-type;"
Length=544

 Score = 102 bits (253),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 40/180 (22%)

Query  118  MTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPT--------CNPQMVSMIPGRV  169
            M  +P + +   QA  ++ Y DP+Y  + A       P          + Q++ +    V
Sbjct  361  MVYWPRVSYK-LQAQTAYPYPDPYYRSIFAPYDPQPYPPQPYPAQPMVHIQLMGIQQAGV  419

Query  170  PLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARK-----------------  212
            PLP++  + +PVFVNAKQYH I+RRRQ RAK E++ KL++ARK                 
Sbjct  420  PLPSDAID-EPVFVNAKQYHGILRRRQSRAKAESEKKLLKARKATLTACLCTNTLGGSQC  478

Query  213  -----PYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQVNRKTNM  267
                 PYLHESRH+HALKR RG GGRFL  K+           +Q+QD+ G +     N+
Sbjct  479  KIILQPYLHESRHLHALKRARGCGGRFLTAKE--------TDNQQKQDETGDKSQVNINL  530



Lambda      K        H        a         alpha
   0.314    0.127    0.365    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 607590876


  Database: ITAG BAC-contig-based predicted proteins
    Posted date:  Mar 21, 2024  3:11 PM
  Number of letters in database: 3,088,772
  Number of sequences in database:  7,128



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40