BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (build SL2.50) 13 sequences; 823,944,041 total letters Query= Untitled_sequence Length=360 Score E Sequences producing significant alignments: (Bits) Value SL2.50ch06No definition line found 665 0.0 SL2.50ch11No definition line found 106 3e-21 SL2.50ch01No definition line found 82.4 4e-14 >SL2.50ch06 No definition line found Length=49751636 Score = 665 bits (360), Expect = 0.0 Identities = 360/360 (100%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 1 ATGAACTACAGGAGGGAGAGTATTCATGATCCAAAGCTTGATTTGAAGCTGAATTTATCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736521 ATGAACTACAGGAGGGAGAGTATTCATGATCCAAAGCTTGATTTGAAGCTGAATTTATCA 45736580 Query 61 CCCCCTAGGGAAAATAATAATATGTTTCCAATATTATCACCAAGCAGATCATCGTCTTCG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736581 CCCCCTAGGGAAAATAATAATATGTTTCCAATATTATCACCAAGCAGATCATCGTCTTCG 45736640 Query 121 TATACTTCTTCAATGGAGAGATCACCAGCAAGTTCATGTGTTTCAAGGGAACCAACTCCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736641 TATACTTCTTCAATGGAGAGATCACCAGCAAGTTCATGTGTTTCAAGGGAACCAACTCCA 45736700 Query 181 GATCATCAAGAATTTTTTGGTAGCCCTGAAGCAACAACAACTTCTATGATGTTAGTAGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736701 GATCATCAAGAATTTTTTGGTAGCCCTGAAGCAACAACAACTTCTATGATGTTAGTAGGA 45736760 Query 241 TGTCCAAGATGCTTAATGTATGTTATGTTATCAGCGGAAGATCCAAAATGCCCCAAATGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736761 TGTCCAAGATGCTTAATGTATGTTATGTTATCAGCGGAAGATCCAAAATGCCCCAAATGT 45736820 Query 301 AAGAGCTCTGTTTTGCTTGATTTTTTCCGCGAGGATCGAATCAATAATCCAAAGAATTGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45736821 AAGAGCTCTGTTTTGCTTGATTTTTTCCGCGAGGATCGAATCAATAATCCAAAGAATTGA 45736880 >SL2.50ch11 No definition line found Length=56302525 Score = 106 bits (57), Expect = 3e-21 Identities = 114/142 (80%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 217 ACAACTTCTATGATGTTAGTAGGATGTCCAAGATGCTTAATGTATGTTATGTTATCAGCG 276 ||||| || |||||| | || ||||| || ||||| || ||||||||||||||||||| Sbjct 53399967 ACAACCTCAATGATGCTTGTGGGATGCCCTAGATGTTTGATGTATGTTATGTTATCAGTA 53400026 Query 277 GAAGATCCAAAATGCCCCAAATGTAAGAGCTCTGTTTTGCTTGATTTTTTCCGCGAGGAT 336 | | ||||||||||| ||||| |||||| |||||||||||||||| |||| || || Sbjct 53400027 AATAAACCAAAATGCCCTAAATGCAAGAGCACTGTTTTGCTTGATTTATTCCATGAAGAA 53400086 Query 337 CGAATCAATAATCCAAAG-AAT 357 ||||||| || ||||| ||| Sbjct 53400087 AGAATCAACAACTCAAAGTAAT 53400108 >SL2.50ch01 No definition line found Length=98543444 Score = 82.4 bits (44), Expect = 4e-14 Identities = 96/121 (79%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 201 TAGCCCTGAAGCAACAACAACTTCTATGATGTTAGTAGGATGTCCAAGATGCTTAATGTA 260 |||||||| | ||||||||| || ||| || |||| ||||||||||| || | ||||| Sbjct 2032282 TAGCCCTG-A--AACAACAACATCCATGGTGCTAGTTGGATGTCCAAGGTGTATGATGTA 2032226 Query 261 TGTTATGTTATCAGCGGAAGATCCAAAATGCCCCAAATGTAAGAGCTCTGTTTTGCTTGA 320 ||| |||||| | | || ||||||| |||||| ||||| || ||| || ||||||||| Sbjct 2032225 TGTCATGTTAGCTGAGGTTGATCCAAGATGCCCTAAATGCAAAAGCACTTGTTTGCTTGA 2032166 Query 321 T 321 | Sbjct 2032165 T 2032165 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 274373248770 Database: Tomato genome chromosomes (build SL2.50) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 823,944,041 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5