BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: N.tabacum K326 protein sequences 85,994 sequences; 32,572,484 total letters Query= AT4G09820.1 Length=518 Score E Sequences producing significant alignments: (Bits) Value mRNA_138910_cdsmRNA_138910 gene_81677|id=AT5G41315.1:evalue=1e-17... 177 2e-48 mRNA_138908_cdsmRNA_138908 gene_81677|id=AT5G41315.1:evalue=1e-17... 177 2e-48 mRNA_61421_cdsmRNA_61421 gene_35618|id=AT1G63650.3:evalue=2e-66:a... 145 9e-41 mRNA_32881_cdsmRNA_32881 gene_18977|id=AT1G32640.1:evalue=0.0:ann... 110 6e-25 mRNA_24423_cdsmRNA_24423 gene_13986|id=AT5G41315.1:evalue=1e-78:a... 103 2e-23 mRNA_138911_cdsmRNA_138911 gene_81677|id=AT5G41315.1:evalue=2e-78... 102 4e-23 mRNA_138909_cdsmRNA_138909 gene_81677|id=AT5G41315.1:evalue=2e-78... 102 4e-23 mRNA_138912_cdsmRNA_138912 gene_81677|id=AT5G41315.1:evalue=2e-98... 102 6e-23 mRNA_131959_cdsmRNA_131959 gene_77779|id=AT1G01260.3:evalue=0.0:a... 96.7 1e-20 mRNA_131958_cdsmRNA_131958 gene_77779|id=AT1G01260.3:evalue=0.0:a... 96.7 1e-20 mRNA_142913_cdsmRNA_142913 gene_84017|id=AT4G00870.1:evalue=5e-76... 75.1 5e-14 mRNA_142914_cdsmRNA_142914 gene_84017|id=AT4G00870.1:evalue=3e-77... 75.1 6e-14 mRNA_25265_cdsmRNA_25265 gene_14492|id=AT4G16430.1:evalue=1e-162:... 75.1 7e-14 mRNA_25264_cdsmRNA_25264 gene_14492|id=AT4G16430.1:evalue=1e-162:... 75.1 7e-14 mRNA_25263_cdsmRNA_25263 gene_14492|id=AT4G16430.1:evalue=1e-162:... 75.1 7e-14 mRNA_57724_cdsmRNA_57724 gene_33508|id=AT4G37850.1:evalue=4e-66:a... 72.8 9e-14 mRNA_121171_cdsmRNA_121171 gene_71559|id=AT4G37850.1:evalue=4e-65... 73.2 1e-13 mRNA_3120_cdsmRNA_3120 gene_1786|id=AT4G16430.1:evalue=8e-162:ann... 73.6 2e-13 mRNA_3119_cdsmRNA_3119 gene_1786|id=AT4G16430.1:evalue=8e-162:ann... 73.6 2e-13 mRNA_3118_cdsmRNA_3118 gene_1786|id=AT4G16430.1:evalue=8e-162:ann... 73.6 2e-13 mRNA_45818_cdsmRNA_45818 gene_26515|id=AT4G37850.1:evalue=8e-49:a... 72.0 3e-13 mRNA_45595_cdsmRNA_45595 gene_26393|id=AT4G37850.1:evalue=2e-47:a... 68.9 4e-12 mRNA_45592_cdsmRNA_45592 gene_26392|id=AT4G37850.1:evalue=4e-47:a... 68.2 5e-12 mRNA_45593_cdsmRNA_45593 gene_26392|id=AT4G37850.1:evalue=4e-47:a... 67.8 6e-12 mRNA_26273_cdsmRNA_26273 gene_15123|id=AT4G37850.1:evalue=2e-40:a... 67.4 7e-12 mRNA_79195_cdsmRNA_79195 gene_45943|id=AT2G16910.1:evalue=5e-82:a... 67.8 9e-12 mRNA_22921_cdsmRNA_22921 gene_13075|id=AT4G37850.1:evalue=7e-47:a... 67.4 1e-11 mRNA_110732_cdsmRNA_110732 gene_65419|id=AT4G37850.1:evalue=8e-47... 65.9 3e-11 mRNA_45596_cdsmRNA_45596 gene_26394|id=AT4G37850.1:evalue=4e-43:a... 64.7 5e-11 mRNA_26749_cdsmRNA_26749 gene_15400|id=AT5G65640.1:evalue=4e-84:a... 64.7 8e-11 >mRNA_138910_cds mRNA_138910 gene_81677|id=AT5G41315.1:evalue=1e-173:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=619 Score = 177 bits (449), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 89/199 (45%), Positives = 123/199 (62%), Gaps = 12/199 (6%) Query 20 LQGLLKTAVQSVDWTYSVFWQF-CPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALE 78 L+ L A++ + W+Y++FW + VL W +GYYNG IKTRKT Q EV ++ L Sbjct 15 LRKQLALAIRGIQWSYAIFWSTPVTKPGVLEWSDGYYNGDIKTRKTVQAGEVNEDQLGLH 74 Query 79 RSQQLRELYETLLAGESTSE-----ARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPG 133 R++QLRELY +LL GES + R ALSPEDLT+TEW++L+C+SF F G+PG Sbjct 75 RTEQLRELYSSLLTGESEEDLQPQAKRPSAALSPEDLTDTEWYFLVCMSFVFNVGQGLPG 134 Query 134 KAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEF 193 K A + +WL A++ +S+ FSR++LAK TVVC P L GV ELG T+ V ED Sbjct 135 KTSATNQTIWLCNAHQAESRVFSRSLLAK-----TVVCFPYLGGVFELGVTELVLEDPNL 189 Query 194 VELTKSFF-YDHCKTNPKP 211 ++ K+ F DH +P Sbjct 190 IQHIKNTFEVDHSVIPKRP 208 Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 144/301 (48%), Gaps = 70/301 (23%) Query 271 HMDMMNLMEEGGN---YSQTVTTLLMSHPTSLLSDSVSTSSYI-----QSSFATWRVENG 322 + + ++L++ G+ Y ++TLL S SD ++ + +SSFA W+ N Sbjct 326 NQNKLHLLDHQGDDAQYQAVISTLLKS------SDQLTLGPHFRNINKKSSFAGWK--ND 377 Query 323 KEHQQVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE-----DLSHVVAE 368 E ++ TA Q +LK+++ VP +H +N K L R D S V++E Sbjct 378 TETPRIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNCLWRPEVDDIDRSRVISE 434 Query 369 RRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE-------NTHHE 421 RRRREK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE N E Sbjct 435 RRRREKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELEARSGKKTNDTAE 494 Query 422 QQ-----------------------------HKRTRTCKRKTSEEVEVSIIENDVLLEMR 452 Q R K +++ + +++I+ +V +MR Sbjct 495 QTSDNCGTSKFNDVKGSSLKRKACDLDEIELESRNELLKGSSADSIVINMIDKEVSFKMR 554 Query 453 CEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKASIAEVKRAIHQV 511 C + +GLLL I++ L +L ++ V +S D I +K G K S+ ++ + +V Sbjct 555 CLWSEGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVSVGAIREVLQRV 614 Query 512 I 512 + Sbjct 615 V 615 >mRNA_138908_cds mRNA_138908 gene_81677|id=AT5G41315.1:evalue=1e-173:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=619 Score = 177 bits (449), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 89/199 (45%), Positives = 123/199 (62%), Gaps = 12/199 (6%) Query 20 LQGLLKTAVQSVDWTYSVFWQF-CPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALE 78 L+ L A++ + W+Y++FW + VL W +GYYNG IKTRKT Q EV ++ L Sbjct 15 LRKQLALAIRGIQWSYAIFWSTPVTKPGVLEWSDGYYNGDIKTRKTVQAGEVNEDQLGLH 74 Query 79 RSQQLRELYETLLAGESTSE-----ARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPG 133 R++QLRELY +LL GES + R ALSPEDLT+TEW++L+C+SF F G+PG Sbjct 75 RTEQLRELYSSLLTGESEEDLQPQAKRPSAALSPEDLTDTEWYFLVCMSFVFNVGQGLPG 134 Query 134 KAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEF 193 K A + +WL A++ +S+ FSR++LAK TVVC P L GV ELG T+ V ED Sbjct 135 KTSATNQTIWLCNAHQAESRVFSRSLLAK-----TVVCFPYLGGVFELGVTELVLEDPNL 189 Query 194 VELTKSFF-YDHCKTNPKP 211 ++ K+ F DH +P Sbjct 190 IQHIKNTFEVDHSVIPKRP 208 Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 144/301 (48%), Gaps = 70/301 (23%) Query 271 HMDMMNLMEEGGN---YSQTVTTLLMSHPTSLLSDSVSTSSYI-----QSSFATWRVENG 322 + + ++L++ G+ Y ++TLL S SD ++ + +SSFA W+ N Sbjct 326 NQNKLHLLDHQGDDAQYQAVISTLLKS------SDQLTLGPHFRNINKKSSFAGWK--ND 377 Query 323 KEHQQVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE-----DLSHVVAE 368 E ++ TA Q +LK+++ VP +H +N K L R D S V++E Sbjct 378 TETPRIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNCLWRPEVDDIDRSRVISE 434 Query 369 RRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE-------NTHHE 421 RRRREK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE N E Sbjct 435 RRRREKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELEARSGKKTNDTAE 494 Query 422 QQ-----------------------------HKRTRTCKRKTSEEVEVSIIENDVLLEMR 452 Q R K +++ + +++I+ +V +MR Sbjct 495 QTSDNCGTSKFNDVKGSSLKRKACDLDEIELESRNELLKGSSADSIVINMIDKEVSFKMR 554 Query 453 CEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKASIAEVKRAIHQV 511 C + +GLLL I++ L +L ++ V +S D I +K G K S+ ++ + +V Sbjct 555 CLWSEGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVSVGAIREVLQRV 614 Query 512 I 512 + Sbjct 615 V 615 >mRNA_61421_cds mRNA_61421 gene_35618|id=AT1G63650.3:evalue=2e-66:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=2e-108:annot='Myc-like anthocyanin regulatory protein' Length=178 Score = 145 bits (367), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 71/159 (45%), Positives = 102/159 (64%), Gaps = 8/159 (5%) Query 24 LKTAVQSVDWTYSVFWQF-CPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALERSQQ 82 L AV+ + W+Y++FW Q VL W +GYYNG IKTRKT Q EV ++ L R++Q Sbjct 19 LALAVRGIQWSYAIFWSTPVTQPGVLEWSDGYYNGDIKTRKTVQVGEVNEDQLGLHRTEQ 78 Query 83 LRELYETLLAGESTSE-----ARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYA 137 LRELY +LL GE + R ALSPEDLT+TEW++L+C+SF F G+PGK A Sbjct 79 LRELYSSLLTGEGEEDLQPQAKRPSAALSPEDLTDTEWYFLVCMSFVFNVGQGLPGKTSA 138 Query 138 RRKHVWLSGANEVDSKTFSRAILAKSA--KIQTVVCIPM 174 + +WL A++ +S+ FSR++LAK++ I + +P+ Sbjct 139 TNQTIWLCNAHQAESRVFSRSLLAKASIVYISALTALPV 177 >mRNA_32881_cds mRNA_32881 gene_18977|id=AT1G32640.1:evalue=0.0:annot='Basic helix-loop-helix (bHLH) DNA-binding family protein';id=Solyc08g076930.1.1:evalue=0.0:annot='Transcription factor' Length=682 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/193 (34%), Positives = 107/193 (55%), Gaps = 18/193 (9%) Query 17 KKELQGLLKTAVQSVDWTYSVFWQFCP----QQRVLVWGNGYYNG----AIKTRKTTQPA 68 ++ LQ L+ A ++ WTY++FWQ VL WG+GYY G A + + PA Sbjct 92 QQRLQTLIDGARET--WTYAIFWQSSAVDLTSPFVLGWGDGYYKGEEDKANRKLAVSSPA 149 Query 69 EVTAEEAALERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPP 128 + +E R + LREL +L++G T A E++T+TEWF+L+ ++ SF Sbjct 150 YIAEQE---HRKKVLREL-NSLISGTQTGTDDAVD----EEVTDTEWFFLISMTQSFVNG 201 Query 129 SGMPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVR 188 SG+PG+A +W++GA ++ + RA A+ +QT+VCIP +GVVELG+T+ + Sbjct 202 SGLPGQALYNSSPIWVAGAEKLAASHCERARQAQGFGLQTMVCIPSANGVVELGSTELII 261 Query 189 EDVEFVELTKSFF 201 + + + + F Sbjct 262 QSSDLMNKVRVLF 274 Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/152 (32%), Positives = 77/152 (51%), Gaps = 28/152 (18%) Query 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419 E L+HV AER+RREKLN++F LR++VP V+KMDK S+LGD I+Y+N L+ ++ E Sbjct 498 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQTTETDR 557 Query 420 HE--------------------------QQHK-RTRTCKRKTSEEVEVSIIENDVLLEMR 452 + Q HK + T + +++V II D ++ ++ Sbjct 558 EDLKSQIEDLKKELDSKDSRRPGPPPPNQDHKMSSHTGSKIVDVDIDVKIIGWDAMIRIQ 617 Query 453 CEYRDGLLLDILQVLHELGIETTAVHTS-VND 483 C ++ ++ L EL ++ S VND Sbjct 618 CNKKNHPAARLMVALKELDLDVHHASVSVVND 649 >mRNA_24423_cds mRNA_24423 gene_13986|id=AT5G41315.1:evalue=1e-78:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=400 Score = 103 bits (256), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 55/252 (22%) Query 311 QSSFATWRVENGKEHQQVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE- 360 +SSFA W+ N E ++ TA Q +LK+++ VP +H +N K L R Sbjct 150 KSSFAGWK--NDTEAPRIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNGLWRPE 204 Query 361 ----DLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416 D S V++ERRRREK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE Sbjct 205 VDDIDRSRVISERRRREKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELE 264 Query 417 -------NTHHEQQHKRTRTC---------KRK-------------------TSEEVEVS 441 N EQ T KRK +++ + +S Sbjct 265 ARSGKKTNDTAEQTSDNCGTSKFNDVNGSLKRKACDMDEMEPESCNELLKGSSADGIVIS 324 Query 442 IIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKAS 500 +I+ +V ++MRC + +GLLL I++ L +L ++ V +S D I +K G K S Sbjct 325 MIDKEVSIKMRCLWSEGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVS 384 Query 501 IAEVKRAIHQVI 512 + ++ + +V+ Sbjct 385 VGAIREVLQRVV 396 >mRNA_138911_cds mRNA_138911 gene_81677|id=AT5G41315.1:evalue=2e-78:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=380 Score = 102 bits (254), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 144/301 (48%), Gaps = 70/301 (23%) Query 271 HMDMMNLMEEGGN---YSQTVTTLLMSHPTSLLSDSVSTSSYI-----QSSFATWRVENG 322 + + ++L++ G+ Y ++TLL S SD ++ + +SSFA W+ N Sbjct 87 NQNKLHLLDHQGDDAQYQAVISTLLKS------SDQLTLGPHFRNINKKSSFAGWK--ND 138 Query 323 KEHQQVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE-----DLSHVVAE 368 E ++ TA Q +LK+++ VP +H +N K L R D S V++E Sbjct 139 TETPRIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNCLWRPEVDDIDRSRVISE 195 Query 369 RRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE-------NTHHE 421 RRRREK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE N E Sbjct 196 RRRREKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELEARSGKKTNDTAE 255 Query 422 QQ-----------------------------HKRTRTCKRKTSEEVEVSIIENDVLLEMR 452 Q R K +++ + +++I+ +V +MR Sbjct 256 QTSDNCGTSKFNDVKGSSLKRKACDLDEIELESRNELLKGSSADSIVINMIDKEVSFKMR 315 Query 453 CEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKASIAEVKRAIHQV 511 C + +GLLL I++ L +L ++ V +S D I +K G K S+ ++ + +V Sbjct 316 CLWSEGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVSVGAIREVLQRV 375 Query 512 I 512 + Sbjct 376 V 376 >mRNA_138909_cds mRNA_138909 gene_81677|id=AT5G41315.1:evalue=2e-78:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=380 Score = 102 bits (254), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 144/301 (48%), Gaps = 70/301 (23%) Query 271 HMDMMNLMEEGGN---YSQTVTTLLMSHPTSLLSDSVSTSSYI-----QSSFATWRVENG 322 + + ++L++ G+ Y ++TLL S SD ++ + +SSFA W+ N Sbjct 87 NQNKLHLLDHQGDDAQYQAVISTLLKS------SDQLTLGPHFRNINKKSSFAGWK--ND 138 Query 323 KEHQQVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE-----DLSHVVAE 368 E ++ TA Q +LK+++ VP +H +N K L R D S V++E Sbjct 139 TETPRIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNCLWRPEVDDIDRSRVISE 195 Query 369 RRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE-------NTHHE 421 RRRREK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE N E Sbjct 196 RRRREKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELEARSGKKTNDTAE 255 Query 422 QQ-----------------------------HKRTRTCKRKTSEEVEVSIIENDVLLEMR 452 Q R K +++ + +++I+ +V +MR Sbjct 256 QTSDNCGTSKFNDVKGSSLKRKACDLDEIELESRNELLKGSSADSIVINMIDKEVSFKMR 315 Query 453 CEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKASIAEVKRAIHQV 511 C + +GLLL I++ L +L ++ V +S D I +K G K S+ ++ + +V Sbjct 316 CLWSEGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVSVGAIREVLQRV 375 Query 512 I 512 + Sbjct 376 V 376 >mRNA_138912_cds mRNA_138912 gene_81677|id=AT5G41315.1:evalue=2e-98:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g081140.2.1:evalue=0.0:annot='Myc-like anthocyanin regulatory protein' Length=472 Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 85/297 (29%), Positives = 142/297 (48%), Gaps = 70/297 (24%) Query 275 MNLMEEGGN---YSQTVTTLLMSHPTSLLSDSVSTSSYI-----QSSFATWRVENGKEHQ 326 ++L++ G+ Y ++TLL S SD ++ + +SSFA W+ N E Sbjct 183 LHLLDHQGDDAQYQAVISTLLKS------SDQLTLGPHFRNINKKSSFAGWK--NDTETP 234 Query 327 QVKTAPSSQWVLKQMIFRVPFLH---------DNTKDKRLPRE-----DLSHVVAERRRR 372 ++ TA Q +LK+++ VP +H +N K L R D S V++ERRRR Sbjct 235 RIGTA---QKLLKKVLLEVPRMHGGVTHKFSRENRKKNCLWRPEVDDIDRSRVISERRRR 291 Query 373 EKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE-------NTHHEQQ-- 423 EK+NE+F+ L SM+P K+DK+S+L +TI Y+ L +RV ELE N EQ Sbjct 292 EKINERFMHLASMLPTGGKVDKISLLDETIEYMKELERRVQELEARSGKKTNDTAEQTSD 351 Query 424 ---------------------------HKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYR 456 R K +++ + +++I+ +V +MRC + Sbjct 352 NCGTSKFNDVKGSSLKRKACDLDEIELESRNELLKGSSADSIVINMIDKEVSFKMRCLWS 411 Query 457 DGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG-KKASIAEVKRAIHQVI 512 +GLLL I++ L +L ++ V +S D I +K G K S+ ++ + +V+ Sbjct 412 EGLLLKIMEALTDLQMDCHTVQSSKIDGILSIAIESKSNGLKTVSVGAIREVLQRVV 468 >mRNA_131959_cds mRNA_131959 gene_77779|id=AT1G01260.3:evalue=0.0:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g096050.2.1:evalue=0.0:annot='Transcription factor' Length=606 Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/180 (36%), Positives = 95/180 (53%), Gaps = 20/180 (11%) Query 33 WTYSVFWQFCPQQR---VLVWGNGYYNGAIKTRKTTQPAEVT------AEEAALERSQQ- 82 W Y++FWQ + VL WG+G + K + EV E+ A +R ++ Sbjct 66 WNYAIFWQISRSKSGELVLGWGDG----CCREPKEGEECEVKRIFNLRLEDGAQQRMRKR 121 Query 83 -LRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKH 141 L++L+ L G T E L + +T+TE F+L + FSFP G PGK + KH Sbjct 122 VLQKLH-MLFGG--TDEDNYAIGL--DRVTDTEMFFLASMYFSFPRGEGGPGKCFGSGKH 176 Query 142 VWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFF 201 +WLS A + +R+ LAKSA +QT+V IP GVVELG+ + + E +E ++ KS F Sbjct 177 LWLSDALKSPLNYCARSFLAKSAGMQTIVLIPTDVGVVELGSVRSIPESLELLQSIKSCF 236 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 31/58 (53%), Positives = 48/58 (83%), Gaps = 0/58 (0%) Query 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417 E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD IAY+ ++K++ ++E+ Sbjct 431 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITEMQKKLRDMES 488 >mRNA_131958_cds mRNA_131958 gene_77779|id=AT1G01260.3:evalue=0.0:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g096050.2.1:evalue=0.0:annot='Transcription factor' Length=606 Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/180 (36%), Positives = 95/180 (53%), Gaps = 20/180 (11%) Query 33 WTYSVFWQFCPQQR---VLVWGNGYYNGAIKTRKTTQPAEVT------AEEAALERSQQ- 82 W Y++FWQ + VL WG+G + K + EV E+ A +R ++ Sbjct 66 WNYAIFWQISRSKSGELVLGWGDG----CCREPKEGEECEVKRIFNLRLEDGAQQRMRKR 121 Query 83 -LRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKH 141 L++L+ L G T E L + +T+TE F+L + FSFP G PGK + KH Sbjct 122 VLQKLH-MLFGG--TDEDNYAIGL--DRVTDTEMFFLASMYFSFPRGEGGPGKCFGSGKH 176 Query 142 VWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFF 201 +WLS A + +R+ LAKSA +QT+V IP GVVELG+ + + E +E ++ KS F Sbjct 177 LWLSDALKSPLNYCARSFLAKSAGMQTIVLIPTDVGVVELGSVRSIPESLELLQSIKSCF 236 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 31/58 (53%), Positives = 48/58 (83%), Gaps = 0/58 (0%) Query 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417 E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD IAY+ ++K++ ++E+ Sbjct 431 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITEMQKKLRDMES 488 >mRNA_142913_cds mRNA_142913 gene_84017|id=AT4G00870.1:evalue=5e-76:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g096370.2.1:evalue=3e-32:annot='BHLH transcription factor' Length=424 Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/165 (33%), Positives = 83/165 (50%), Gaps = 23/165 (14%) Query 354 DKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVH 413 D + L+HV AER+RREKLN +F LRS VP V++MDK S+L D ++Y+N L+ +V Sbjct 242 DNNINMAALNHVEAERQRREKLNHRFYALRSAVPNVSRMDKASLLSDAVSYINQLKAKVD 301 Query 414 ELE----------------NTHHEQQHKRTRT---CKRKTSEEVEVSIIENDVLLEMRCE 454 ELE N E Q T + +S EVEV I+ D ++ ++ E Sbjct 302 ELELQLIDHSSSSNKKQKSNESGENQSTNTSVDQELRPNSSLEVEVKIVGPDAMIRVQSE 361 Query 455 YRDGLLLDILQVLHELGIET-TAVHTSVND---HDFEAEIRAKVR 495 + ++ L L ++ A +SVN+ HD ++ +R Sbjct 362 NVNYPSAKLMSALRHLQLQVHHASISSVNNLMLHDVVVKVPQGLR 406 >mRNA_142914_cds mRNA_142914 gene_84017|id=AT4G00870.1:evalue=3e-77:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g096370.2.1:evalue=0.0:annot='BHLH transcription factor' Length=449 Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/165 (33%), Positives = 84/165 (51%), Gaps = 23/165 (14%) Query 354 DKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVH 413 D + L+HV AER+RREKLN +F LRS VP V++MDK S+L D ++Y+N L+ +V Sbjct 267 DNNINMAALNHVEAERQRREKLNHRFYALRSAVPNVSRMDKASLLSDAVSYINQLKAKVD 326 Query 414 ELE----------------NTHHEQQHKRT---RTCKRKTSEEVEVSIIENDVLLEMRCE 454 ELE N E Q T + + +S EVEV I+ D ++ ++ E Sbjct 327 ELELQLIDHSSSSNKKQKSNESGENQSTNTSVDQELRPNSSLEVEVKIVGPDAMIRVQSE 386 Query 455 YRDGLLLDILQVLHELGIET-TAVHTSVND---HDFEAEIRAKVR 495 + ++ L L ++ A +SVN+ HD ++ +R Sbjct 387 NVNYPSAKLMSALRHLQLQVHHASISSVNNLMLHDVVVKVPQGLR 431 >mRNA_25265_cds mRNA_25265 gene_14492|id=AT4G16430.1:evalue=1e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 70/127 (55%), Gaps = 15/127 (12%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLD 462 AY+ L+ R+ L+ K+ K++ E++ ++D ++ + C + Sbjct 368 AYITDLQARIRVLDAEKEMVNDKQ----KQQAPLEIDFHQRQDDAVVRVGCPLNAHPVSR 423 Query 463 ILQVLHE 469 +L+ E Sbjct 424 VLKTFQE 430 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 90/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ E + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIHTCFGGSEDDN-----IAAKLDSVSDVEVFYLTSMYYVFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A +T+V +P+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSEVKGCLEHFQSRSYLAKLAGFETLVFVPLKSGVVELGSLKSIAEDQNLI 222 Query 195 ELTKS 199 ++ K+ Sbjct 223 QMVKT 227 >mRNA_25264_cds mRNA_25264 gene_14492|id=AT4G16430.1:evalue=1e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 70/127 (55%), Gaps = 15/127 (12%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLD 462 AY+ L+ R+ L+ K+ K++ E++ ++D ++ + C + Sbjct 368 AYITDLQARIRVLDAEKEMVNDKQ----KQQAPLEIDFHQRQDDAVVRVGCPLNAHPVSR 423 Query 463 ILQVLHE 469 +L+ E Sbjct 424 VLKTFQE 430 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 90/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ E + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIHTCFGGSEDDN-----IAAKLDSVSDVEVFYLTSMYYVFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A +T+V +P+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSEVKGCLEHFQSRSYLAKLAGFETLVFVPLKSGVVELGSLKSIAEDQNLI 222 Query 195 ELTKS 199 ++ K+ Sbjct 223 QMVKT 227 >mRNA_25263_cds mRNA_25263 gene_14492|id=AT4G16430.1:evalue=1e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 70/127 (55%), Gaps = 15/127 (12%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLD 462 AY+ L+ R+ L+ K+ K++ E++ ++D ++ + C + Sbjct 368 AYITDLQARIRVLDAEKEMVNDKQ----KQQAPLEIDFHQRQDDAVVRVGCPLNAHPVSR 423 Query 463 ILQVLHE 469 +L+ E Sbjct 424 VLKTFQE 430 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 90/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ E + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIHTCFGGSEDDN-----IAAKLDSVSDVEVFYLTSMYYVFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A +T+V +P+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSEVKGCLEHFQSRSYLAKLAGFETLVFVPLKSGVVELGSLKSIAEDQNLI 222 Query 195 ELTKS 199 ++ K+ Sbjct 223 QMVKT 227 >mRNA_57724_cds mRNA_57724 gene_33508|id=AT4G37850.1:evalue=4e-66:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g106460.2.1:evalue=5e-148:annot='Transcription factor' Length=286 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 24/121 (20%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE------- 416 H++AER+RREKL+++FI L +++P + KMDK S+LGD I Y+ L++RV LE Sbjct 107 HIIAERKRREKLSQRFIALSALIPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKKKS 166 Query 417 -----------------NTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGL 459 N+ ++ + + E+E E DVL+ + CE + GL Sbjct 167 VESVVFIKKYELYGDGENSSSDENYSSGTLPIDEPLPEIEARFSERDVLVRIHCEKKKGL 226 Query 460 L 460 + Sbjct 227 V 227 >mRNA_121171_cds mRNA_121171 gene_71559|id=AT4G37850.1:evalue=4e-65:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc01g106460.2.1:evalue=4e-147:annot='Transcription factor' Length=334 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 24/121 (20%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE------- 416 H++AER+RREKL+++FI L +++P + KMDK S+LGD I Y+ L+++V LE Sbjct 155 HIIAERKRREKLSQRFIALSALIPGLKKMDKASVLGDAIKYLKQLQEKVKTLEEQIKKKS 214 Query 417 -----------------NTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGL 459 N+ ++ + + E+E E DVL+ + CE + GL Sbjct 215 VESVVFVKKYELYGDGENSSSDENYSSGTLPIDEPLPEIEARFSEKDVLVRIHCEKKKGL 274 Query 460 L 460 + Sbjct 275 V 275 >mRNA_3120_cds mRNA_3120 gene_1786|id=AT4G16430.1:evalue=8e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 54/87 (62%), Gaps = 17/87 (20%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVH------ELENTHHEQQ 423 AY+ L+ ++ E+ N +QQ Sbjct 368 AYITDLQAKIRVLDAEKEMVNDQQKQQ 394 Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ T G + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIH-TCFGGSADDN----IAAKLDSVSDVEVFYLTSMYYIFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A+ +T+V IP+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSDVRGCLEHFQSRSYLAKLARFETLVFIPLKSGVVELGSLKSIPEDQNLI 222 Query 195 ELTKS 199 + K+ Sbjct 223 QTVKT 227 >mRNA_3119_cds mRNA_3119 gene_1786|id=AT4G16430.1:evalue=8e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 54/87 (62%), Gaps = 17/87 (20%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVH------ELENTHHEQQ 423 AY+ L+ ++ E+ N +QQ Sbjct 368 AYITDLQAKIRVLDAEKEMVNDQQKQQ 394 Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ T G + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIH-TCFGGSADDN----IAAKLDSVSDVEVFYLTSMYYIFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A+ +T+V IP+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSDVRGCLEHFQSRSYLAKLARFETLVFIPLKSGVVELGSLKSIPEDQNLI 222 Query 195 ELTKS 199 + K+ Sbjct 223 QTVKT 227 >mRNA_3118_cds mRNA_3118 gene_1786|id=AT4G16430.1:evalue=8e-162:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g083980.1.1:evalue=0.0:annot='BHLH transcription factor' Length=475 Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 54/87 (62%), Gaps = 17/87 (20%) Query 354 DKRLPR-----------EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTI 402 D+R PR E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Sbjct 308 DERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 367 Query 403 AYVNHLRKRVH------ELENTHHEQQ 423 AY+ L+ ++ E+ N +QQ Sbjct 368 AYITDLQAKIRVLDAEKEMVNDQQKQQ 394 Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%) Query 21 QGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNGYYNGA-IKTRKTTQPAEVTAEEAA 76 Q L K V+ DWTY+++WQ + L+WG+G+ A + + +E Sbjct 50 QSLCKI-VEGSDWTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDG 108 Query 77 LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFP--PPSGMPGK 134 ++ L++++ T G + A + +++ E FYL + + FP PS P + Sbjct 109 NKKKLVLQKIH-TCFGGSADDN----IAAKLDSVSDVEVFYLTSMYYIFPFEKPSS-PSQ 162 Query 135 AYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFV 194 ++ + +W+S SR+ LAK A+ +T+V IP+ GVVELG+ K + ED + Sbjct 163 SFNSARSIWVSDVRGCLEHFQSRSYLAKLARFETLVFIPLKSGVVELGSLKSIPEDQNLI 222 Query 195 ELTKS 199 + K+ Sbjct 223 QTVKT 227 >mRNA_45818_cds mRNA_45818 gene_26515|id=AT4G37850.1:evalue=8e-49:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091800.2.1:evalue=4e-126:annot='BHLH transcription factor' Length=339 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/136 (31%), Positives = 70/136 (51%), Gaps = 20/136 (15%) Query 348 LHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNH 407 L K +RLP D H++AER+RREKL+++F+TL +++P + K+DK SIL I +V Sbjct 145 LGQGQKRERLPSVDQHHIIAERKRREKLSQRFVTLSAILPGLKKVDKASILEQAIRHVKE 204 Query 408 LRKRVHELENTHHEQQHKRTRTCKRKTSEE--------------------VEVSIIENDV 447 L+++V +LE + K + EE +EV + +V Sbjct 205 LKEKVQQLEEQEKTRSEKSVMFVNKSQLEEDDHSSSSSAENNNCSSGDADIEVRFSDKNV 264 Query 448 LLEMRCEYRDGLLLDI 463 L+ + CE R+ + +I Sbjct 265 LIRITCERRNAFVQNI 280 >mRNA_45595_cds mRNA_45595 gene_26393|id=AT4G37850.1:evalue=2e-47:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091810.1.1:evalue=2e-100:annot='Transcription factor' Length=358 Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 25/134 (19%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423 HVVAER+RRE+L ++FI L +++P + K+DK ++LGD I ++ L ++V LE ++ Sbjct 166 HVVAERKRRERLTQRFIALSTLIPNLKKLDKATVLGDAIKHIKQLEEQVKTLEEKAKKRN 225 Query 424 HKRTRTCKR-------------------------KTSEEVEVSIIENDVLLEMRCEYRDG 458 + KR + ++EV + ++L+ +RC+ + G Sbjct 226 EEPVVAVKRPHLASTTSDHYSSSSEDNVSSVSTDRPQPDIEVRASDGNILVRIRCKKQTG 285 Query 459 LLLDILQVLHELGI 472 ++ +I + +L + Sbjct 286 IIKEIFSQVEKLKL 299 >mRNA_45592_cds mRNA_45592 gene_26392|id=AT4G37850.1:evalue=4e-47:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091810.1.1:evalue=8e-133:annot='Transcription factor' Length=317 Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/163 (26%), Positives = 78/163 (48%), Gaps = 26/163 (16%) Query 334 SQWVLKQMIFRVPFLHDNTKDKRLPREDLS---HVVAERRRREKLNEKFITLRSMVPFVT 390 SQ +++ + F T+ K R L HVVAER+RRE+L ++FI L +++P + Sbjct 100 SQNLIQALGFGAADTTTTTQKKSYNRTSLQAQDHVVAERKRRERLTQRFIALSTLIPNLK 159 Query 391 KMDKVSILGDTIAYVNHLRKRVHELENTHHEQQHKRTRTCKR------------------ 432 K+DK S+LGD I Y+ L ++V LE + KR Sbjct 160 KLDKASVLGDAIKYIKQLEEQVKTLEEKAKNCSEESVVAVKRARVLSSYDDYSSSSDENS 219 Query 433 -----KTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHEL 470 ++ ++EV + + + ++ + C+ + G++ +I + +L Sbjct 220 SISTDRSFPDIEVRVSDGNFMISIYCKKQSGIIKEIYNEVEKL 262 >mRNA_45593_cds mRNA_45593 gene_26392|id=AT4G37850.1:evalue=4e-47:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091810.1.1:evalue=3e-125:annot='Transcription factor' Length=301 Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/163 (26%), Positives = 78/163 (48%), Gaps = 26/163 (16%) Query 334 SQWVLKQMIFRVPFLHDNTKDKRLPREDLS---HVVAERRRREKLNEKFITLRSMVPFVT 390 SQ +++ + F T+ K R L HVVAER+RRE+L ++FI L +++P + Sbjct 84 SQNLIQALGFGAADTTTTTQKKSYNRTSLQAQDHVVAERKRRERLTQRFIALSTLIPNLK 143 Query 391 KMDKVSILGDTIAYVNHLRKRVHELENTHHEQQHKRTRTCKR------------------ 432 K+DK S+LGD I Y+ L ++V LE + KR Sbjct 144 KLDKASVLGDAIKYIKQLEEQVKTLEEKAKNCSEESVVAVKRARVLSSYDDYSSSSDENS 203 Query 433 -----KTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHEL 470 ++ ++EV + + + ++ + C+ + G++ +I + +L Sbjct 204 SISTDRSFPDIEVRVSDGNFMISIYCKKQSGIIKEIYNEVEKL 246 >mRNA_26273_cds mRNA_26273 gene_15123|id=AT4G37850.1:evalue=2e-40:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc06g064590.1.1:evalue=3e-54:annot='BHLH transcription factor' Length=302 Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 24/137 (18%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423 H + ER+RR+KL + FI+L ++P + KMDK S+LGDTI Y+ L++RV LE Sbjct 126 HAILERKRRQKLTQLFISLSKILPGLKKMDKASLLGDTIQYMKELQQRVKVLEKEIKNNP 185 Query 424 HKRTRTCKRKTS-----------------EEVEVSIIENDVLLEMRCEYRDGLLLDILQV 466 KR+ K + E+ V I + L+++ C + G++ IL Sbjct 186 SKRSLAAKVPSDVSLSEGSDYSSNEEDIVPEINVRISDKSALIDIYCNKQGGVVGRILS- 244 Query 467 LHELGIETTAVHTSVND 483 E +H SV D Sbjct 245 ------EMERLHLSVRD 255 >mRNA_79195_cds mRNA_79195 gene_45943|id=AT2G16910.1:evalue=5e-82:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc08g062780.1.1:evalue=4e-180:annot='BHLH transcription factor' Length=348 Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/176 (30%), Positives = 79/176 (45%), Gaps = 59/176 (34%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVH----ELENTH 419 ++VAER+RR+KLNE+ LR++VP ++K+D+ SILGD I YV L K+V ELE Sbjct 85 NLVAERKRRKKLNERLYALRALVPKISKLDRASILGDAIEYVMELEKQVKDLQLELEEHS 144 Query 420 HEQQHKRTRT--------------CKRKTSEEVEVS-----------------------I 442 + Q +R + R SE V++S + Sbjct 145 DDDQSRRNQNQVQPEVLGQNESDQNNRPKSENVKLSNGSHRGLSSNSNGSIDPSGQNQVV 204 Query 443 IENDVLLEMRC------------------EYRDGLLLDILQVLHELGIETTAVHTS 480 END L +M E++ G + IL+ L+ LG+E T V+ + Sbjct 205 DENDKLQQMEPQVEVAQLDGNEFFVKVFREHKAGGFVRILEALNSLGLEVTNVNAT 260 >mRNA_22921_cds mRNA_22921 gene_13075|id=AT4G37850.1:evalue=7e-47:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091800.2.1:evalue=3e-139:annot='BHLH transcription factor' Length=351 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 49/69 (71%), Gaps = 0/69 (0%) Query 348 LHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNH 407 L K +RLP D H++AER+RREKL+++F+TL +++P + K+DK SIL I +V Sbjct 155 LGQGQKRERLPSVDQDHIIAERKRREKLSQRFVTLSAILPGLKKVDKASILEQAIRHVKE 214 Query 408 LRKRVHELE 416 L+++V +LE Sbjct 215 LKEKVQQLE 223 >mRNA_110732_cds mRNA_110732 gene_65419|id=AT4G37850.1:evalue=8e-47:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091810.1.1:evalue=1e-128:annot='Transcription factor' Length=317 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 66/130 (51%), Gaps = 23/130 (18%) Query 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423 HV+AER+RRE+L ++FI L +++P + K+DK S+LGD I Y+ L ++V LE Sbjct 133 HVMAERKRRERLTQRFIALSTLIPNLKKLDKASVLGDAIKYIKQLEEQVKTLEEKAKNCS 192 Query 424 HKRTRTCKR-----------------------KTSEEVEVSIIENDVLLEMRCEYRDGLL 460 + KR ++ ++EV + + + ++ + C+ + G++ Sbjct 193 DESAVAVKRARVLSSYDEYSSSSDENSSISTDRSFPDIEVRVSDGNFMISIYCKKQTGII 252 Query 461 LDILQVLHEL 470 +I + +L Sbjct 253 KEIYNEVEKL 262 >mRNA_45596_cds mRNA_45596 gene_26394|id=AT4G37850.1:evalue=4e-43:annot='basic helix-loop-helix (bHLH) DNA-binding superfamily protein';id=Solyc02g091820.1.1:evalue=6e-96:annot='Transcription factor' Length=290 Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 55/94 (59%), Gaps = 6/94 (6%) Query 329 KTAPSSQWVLKQMIFRVPFL--HDNTKDK----RLPREDLSHVVAERRRREKLNEKFITL 382 +T P S + Q +F+ D T+ K R P + HV++ER+RRE+L + FI+L Sbjct 65 QTCPDSDYDDSQHLFQAMGFTAADITQKKSTYSRTPLQAQDHVLSERKRRERLTQCFISL 124 Query 383 RSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416 +++P + K+DK SILGD I Y+ L +V LE Sbjct 125 STLIPNLKKLDKESILGDAIKYIKQLENQVKSLE 158 >mRNA_26749_cds mRNA_26749 gene_15400|id=AT5G65640.1:evalue=4e-84:annot='beta HLH protein 93';id=Solyc00g050430.2.1:evalue=3e-176:annot='BHLH transcription factor' Length=344 Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/172 (30%), Positives = 93/172 (54%), Gaps = 14/172 (8%) Query 352 TKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKR 411 TK K+L + +++AERRRR++LN++ LRS+VP ++KMD+ SILGDTI Y+ L +R Sbjct 164 TKSKKLDGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLER 223 Query 412 VHELENTHHEQQHKRTRTCKRKTSEEVEVSIIEN-----------DVLLEMRCEYRDGLL 460 ++ L+ ++ + K + E+ ++ N D +E+ C + GLL Sbjct 224 INNLQEEMELGPNQLSLLSIFKDVKPNEM-LVRNSPKFDVERRGVDTKVEICCAGKPGLL 282 Query 461 LDILQVLHELGIET-TAVHTSVNDHDFEAEIRAKVRGKKASIAE-VKRAIHQ 510 L + L LG++ V +S +D +A ++ + +E +K+A+ + Sbjct 283 LSTVTTLEALGLDIQQCVISSFSDFTMQASCSEEMEQRGVVNSEDIKQALFR 334 Lambda K H a alpha 0.315 0.128 0.367 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 9430162752 Database: N.tabacum K326 protein sequences Posted date: Mar 21, 2024 3:46 PM Number of letters in database: 32,572,484 Number of sequences in database: 85,994 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40