BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Tomato Genome protein sequences (ITAG release 2.40)
           34,725 sequences; 11,955,943 total letters



Query= Untitled_sequence

Length=92
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc12g006560.1Early nodulin 93 protein IPR005050 Early nodulin ...  164     6e-55
Solyc12g006680.1Early nodulin 93 protein IPR005050 Early nodulin ...  137     6e-44
Solyc08g066160.2Enod93 protein (Fragment) IPR005050 Early nodulin...  67.0    6e-16


>Solyc12g006560.1 Early nodulin 93 protein  IPR005050  Early nodulin 93 ENOD93 
protein
Length=86

 Score = 164 bits (416),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 86/92 (93%), Positives = 86/92 (93%), Gaps = 6/92 (7%)

Query  1   MAKNVSLASMDQKLAMAKRYSYEGVVAGAKAAVVASVATAIPTFAIGKMSPWARTYLNPT  60
           MAKNVSLASMDQKLAMAKRYSYEGVVAGAKAAVVASV      FAIGKMSPWARTYLNPT
Sbjct  1   MAKNVSLASMDQKLAMAKRYSYEGVVAGAKAAVVASV------FAIGKMSPWARTYLNPT  54

Query  61  AKALIISTVAGMAYFVVADKTILKTARQNSFK  92
           AKALIISTVAGMAYFVVADKTILKTARQNSFK
Sbjct  55  AKALIISTVAGMAYFVVADKTILKTARQNSFK  86


>Solyc12g006680.1 Early nodulin 93 protein  IPR005050  Early nodulin 93 ENOD93 
protein
Length=95

 Score = 137 bits (344),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 74/92 (80%), Positives = 82/92 (89%), Gaps = 0/92 (0%)

Query  1   MAKNVSLASMDQKLAMAKRYSYEGVVAGAKAAVVASVATAIPTFAIGKMSPWARTYLNPT  60
           MAKNVSL S+DQKLA AKR S+EG  AGAKAAV A+V TAIPT+A GK+SPWAR +LNPT
Sbjct  1   MAKNVSLDSIDQKLAYAKRCSHEGAKAGAKAAVFATVVTAIPTYACGKISPWARAHLNPT  60

Query  61  AKALIISTVAGMAYFVVADKTILKTARQNSFK  92
           AKALI+ST AGMAYF+VADKTILKTARQNSFK
Sbjct  61  AKALIVSTAAGMAYFIVADKTILKTARQNSFK  92


>Solyc08g066160.2 Enod93 protein (Fragment)  IPR005050  Early nodulin 93 ENOD93 
protein
Length=113

 Score = 67.0 bits (162),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (69%), Gaps = 0/80 (0%)

Query  11   DQKLAMAKRYSYEGVVAGAKAAVVASVATAIPTFAIGKMSPWARTYLNPTAKALIISTVA  70
            + ++  ++  + EGV AG KAA VA VA+AIPT    +  PWA+  LN TA+ALIIS  +
Sbjct  28   EDRIRKSRECTQEGVRAGTKAAAVACVASAIPTLVAVRTIPWAKANLNYTAQALIISAAS  87

Query  71   GMAYFVVADKTILKTARQNS  90
              AYF+ ADKTIL+ AR+N+
Sbjct  88   IAAYFITADKTILECARRNT  107



Lambda      K        H        a         alpha
   0.318    0.125    0.338    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 294089790


  Database: Tomato Genome protein sequences (ITAG release 2.40)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 11,955,943
  Number of sequences in database:  34,725



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40