BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato genome chromosomes (build SL2.50)
           13 sequences; 823,944,041 total letters



Query= Untitled_sequence

Length=3557
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

SL2.50ch05No definition line found                                    75.0    8e-11


>SL2.50ch05 No definition line found
Length=65875088

 Score = 75.0 bits (40),  Expect = 8e-11
 Identities = 54/61 (89%), Gaps = 0/61 (0%)
 Strand=Plus/Minus

Query  1719     GCAGCCAGAAGCTGCTGCTCAACATGCTGGACAACCACTGCATCCTCTCCAACCAGCAGA  1778
                |||| |||||||||||||| ||||||||||||||||||||||| | ||  ||| ||||||
Sbjct  7387213  GCAGTCAGAAGCTGCTGCTGAACATGCTGGACAACCACTGCATTCACTGTAACGAGCAGA  7387154

Query  1779     T  1779
                |
Sbjct  7387153  T  7387153



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 2906049257077


  Database: Tomato genome chromosomes (build SL2.50)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 823,944,041
  Number of sequences in database:  13



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5