BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Capsicum annuum zunla Genome CDS (v2.0) 35,336 sequences; 36,029,754 total letters Query= Untitled_sequence Length=627 Score E Sequences producing significant alignments: (Bits) Value Capana00g000986 846 0.0 Capana01g000050 252 2e-66 Capana00g000987 193 2e-48 >Capana00g000986 Length=462 Score = 846 bits (458), Expect = 0.0 Identities = 458/458 (100%), Gaps = 0/458 (0%) Strand=Plus/Plus Query 1 ATGTCTAGTGGTATGCAAAAATCGATTCATGAAGATGAACGTGCAGGAGCAGAAATTTCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTCTAGTGGTATGCAAAAATCGATTCATGAAGATGAACGTGCAGGAGCAGAAATTTCA 60 Query 61 TATGGAGCTGAAGAATGCTATCGTCGAATTGTAAAGCTCCTGCTAGACTCGGGATTTCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TATGGAGCTGAAGAATGCTATCGTCGAATTGTAAAGCTCCTGCTAGACTCGGGATTTCCA 120 Query 121 AAAGGGTTGCTACCACTTAAAGAACTCGAAGAATTTGGCTATGTTTGCAAAACTGGATTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAAGGGTTGCTACCACTTAAAGAACTCGAAGAATTTGGCTATGTTTGCAAAACTGGATTT 180 Query 181 GCATGGATGAAACAAAAAGCCCCTTACGAGCATTATTTTACTGAGACGAAAACACTCGTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCATGGATGAAACAAAAAGCCCCTTACGAGCATTATTTTACTGAGACGAAAACACTCGTT 240 Query 241 AGCTACGGAACTGAGGTCACTGCATATGTTGAGAAAGGTAAAATGAAGAAAATAAGTGGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AGCTACGGAACTGAGGTCACTGCATATGTTGAGAAAGGTAAAATGAAGAAAATAAGTGGT 300 Query 301 ATTAAGGGTAAGCAATTGTTTCTTTGGGTGCCAACGGTTGAGATGAGTATTGAAGATCGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ATTAAGGGTAAGCAATTGTTTCTTTGGGTGCCAACGGTTGAGATGAGTATTGAAGATCGT 360 Query 361 GATAGAAAGAAGATTTATTTCAAGGGACCTGTGGGAATCGGGAAATCTTATCCGATCACT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GATAGAAAGAAGATTTATTTCAAGGGACCTGTGGGAATCGGGAAATCTTATCCGATCACT 420 Query 421 ATTTTTATGACCGACGAGGAAAAGGAGAAAGCTAAAAA 458 |||||||||||||||||||||||||||||||||||||| Sbjct 421 ATTTTTATGACCGACGAGGAAAAGGAGAAAGCTAAAAA 458 >Capana01g000050 Length=468 Score = 252 bits (136), Expect = 2e-66 Identities = 333/429 (78%), Gaps = 10/429 (2%) Strand=Plus/Plus Query 27 TCATG--AAGATGAACGTGCAGGAGCAGAAATTTCATATGGAGCTGAAGAATGCTATCGT 84 ||||| ||||||| || ||||||||||||||| ||||||||||||||| |||||| || Sbjct 19 TCATGCCAAGATGAGCGCGCAGGAGCAGAAATTGTATATGGAGCTGAAGAGTGCTATGGT 78 Query 85 CGAAT-TGTAAAGCTCCTGCTAGA-CTCGGGATTTCCAAAAGGGTTGCTACCACTTAAAG 142 | | | ||| |||| ||| ||| || ||||||||| | || | || | ||||||| Sbjct 79 C-ATTCTGTCGAGCTTCTGAAAGAGCT-GGGATTTCCCATGGGCGTCCTTGCTCTTAAAG 136 Query 143 AACTCGAAGAATTTGGCTATGTTTGCAAAACTGGATTTGCATGGATGAAACAAAAAGCCC 202 | || ||||||| ||| || ||| || |||||||||||| |||||||||||||| || | Sbjct 137 ACCTTGAAGAATGTGGTTACGTTCGCGAAACTGGATTTGTGTGGATGAAACAAAAGGCTC 196 Query 203 CTTACGAGCATTATTTTACTGA-GACGAAAACACTCGTTAGCTACGGAACTGAGGTCACT 261 | || || ||||| || | | ||| ||||| || |||||||| || || ||||||||| Sbjct 197 CGTATGAACATTACTTCG-TCACGACTAAAACTCTAGTTAGCTATGGCACAGAGGTCACT 255 Query 262 GCATATGTTGAGAAAGGTAAAATGAAGAAAATAAGTGGTATTAAGGGTAAGCAATTGTTT 321 || || || |||||||| | |||||||||||| | ||| ||||| |||||||| | ||| Sbjct 256 GCTTACGTGGAGAAAGGGAGAATGAAGAAAATGACTGGAGTTAAGAGTAAGCAACTATTT 315 Query 322 CTTTGGGTGCCAACGGTTGAGATGAGTATTGAAGATCGTGAT-AGAAAGAAGATTTATTT 380 || |||||||||| | ||||||||| ||||| |||| || | |||| || ||| | || Sbjct 316 CTGTGGGTGCCAATAGCTGAGATGAGCATTGAGGATCCTGCTCAGAATAAA-ATTCACTT 374 Query 381 CAAGGGACCTGTGGGAATCGGGAAATCTTATCCGATCACTATTTTTATGACCGACGAGGA 440 |||| ||| | ||||| || || |||| ||| ||||| ||| ||||| ||||| || Sbjct 375 CAAGACTCCTTTAGGAATTGGAAAGTCTTTTCCCCTCACTGCTTTCATGACTGACGAAGA 434 Query 441 AAAGGAGAA 449 |||| |||| Sbjct 435 AAAGAAGAA 443 >Capana00g000987 Length=375 Score = 193 bits (104), Expect = 2e-48 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 518 AGAAGATTCAATTGAAAGGTCGTATGGGAATTGGAAGGTCTTATCCCATTACTGCTTTTA 577 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 AGATGAGTCAATTGAAAGGTCGTATGGGAATTGGAAGGTCTTATCCCATTACTGCTTTTA 325 Query 578 TGACTGATGAGGAAAAACAAAAGTACATGGAGAATAAAGCCAATGAATAG 627 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 TGACTGATGAGGAAAAACAAAAGTACATGGAGAATAAAGCCAATGAATAG 375 Score = 143 bits (77), Expect = 2e-33 Identities = 213/277 (77%), Gaps = 15/277 (5%) Strand=Plus/Plus Query 1 ATGTCTAGTGGTATGCAAAAATCGATTCATGAAGATGAACGTGCAGGAGCAGAAATTTCA 60 ||| |||||| | ||| |||||| |||| ||||| |||||||||||||| |||| || Sbjct 1 ATGGCTAGTGATTTGCGAAAATC-ATTC--GAAGAAGAACGTGCAGGAGCTATAATTGCA 57 Query 61 TATGGAGCTGAAGAATGCTATCGTCGAATTGTAAAGCTCCTGCTAGACTCGGGATTTCCA 120 ||||| |||||||| || |||| | |||| | ||||||||| |||| | ||||||| Sbjct 58 TATGGCGCTGAAGATTGTAATCGCCATATTGCAGAGCTCCTGCACGACTTGAGATTTCCC 117 Query 121 AAAGGGTTGCTACCACTTAAAGAACTCGAAGAATTTGGCTATGTTTGCAAAACTGGATTT 180 |||||| | | |||| ||| | |||||||||||||| ||||||||||| Sbjct 118 AAAGGG--G-T---ACTT-----CCTCTTA-AATTTGGCTATGTTCATGAAACTGGATTT 165 Query 181 GCATGGATGAAACAAAAAGCCCCTTACGAGCATTATTTTACTGAGACGAAAACACTCGTT 240 ||||||||||||||||| || || ||||||||||||||| || | |||| | || Sbjct 166 GCATGGATGAAACAAAAGGCTCCCTACGAGCATTATTTTGCTTCAATTAAAATGGTTGTG 225 Query 241 AGCTACGGAACTGAGGTCACTGCATATGTTGAGAAAG 277 ||||||| ||||| ||||||||||| || ||||||| Sbjct 226 AGCTACGCGACTGATGTCACTGCATACGTGGAGAAAG 262 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21214559070 Database: Capsicum annuum zunla Genome CDS (v2.0) Posted date: Mar 21, 2024 3:56 PM Number of letters in database: 36,029,754 Number of sequences in database: 35,336 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5