BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (Build SL4.0) 13 sequences; 782,520,033 total letters Query= Untitled_sequence Length=24 Score E Sequences producing significant alignments: (Bits) Value SL4.0ch06 38.1 0.008 SL4.0ch11 34.4 0.11 SL4.0ch01 32.5 0.38 >SL4.0ch06 Length=47258699 Score = 38.1 bits (20), Expect = 0.008 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTTGGTTTGTGGTGTGACT 20 |||||||||||||||||||| Sbjct 23587598 TCTTGGTTTGTGGTGTGACT 23587617 >SL4.0ch11 Length=54379777 Score = 34.4 bits (18), Expect = 0.11 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 4 TGGTTTGTGGTGTGACTCATG 24 ||||||||| ||||||||||| Sbjct 35063701 TGGTTTGTGTTGTGACTCATG 35063721 Score = 32.5 bits (17), Expect = 0.38 Identities = 20/21 (95%), Gaps = 1/21 (5%) Strand=Plus/Minus Query 4 TGGTTTGTGGTGTGAC-TCAT 23 |||||||||||||||| |||| Sbjct 967737 TGGTTTGTGGTGTGACCTCAT 967717 >SL4.0ch01 Length=90863682 Score = 32.5 bits (17), Expect = 0.38 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TCTTGGTTTGTGGTGTGACT 20 |||||||||||||||| ||| Sbjct 52254928 TCTTGGTTTGTGGTGTTACT 52254909 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 2347559280 Database: Tomato genome chromosomes (Build SL4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 782,520,033 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5