BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Nitab v4.5 cDNA Edwards2017
           69,500 sequences; 76,611,276 total letters



Query= Untitled_sequence

Length=132
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Nitab4.5_0002736g0040.1Probable nicotinate-nucleotide adenylyltra...  244     2e-64
Nitab4.5_0007415g0050.1Rossmann-like alpha/beta/alpha sandwich fo...  239     7e-63


>Nitab4.5_0002736g0040.1 Probable nicotinate-nucleotide adenylyltransferase, Rossmann-like 
alpha/beta/alpha sandwich fold, Cytidyltransferase-like 
domain
Length=600

 Score = 244 bits (132),  Expect = 2e-64
 Identities = 132/132 (100%), Gaps = 0/132 (0%)
 Strand=Plus/Plus

Query  1    AATGGAATCAGTTCAACGGGATTAAGGGACTGCATCTCGAAAGGGTTCTCAGTGAAGTAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469  AATGGAATCAGTTCAACGGGATTAAGGGACTGCATCTCGAAAGGGTTCTCAGTGAAGTAC  528

Query  61   TTGACAGCCGATGAAGTAATTGATTATATGAAACAACATAACCTTTATAGAGGGCAATGT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  TTGACAGCCGATGAAGTAATTGATTATATGAAACAACATAACCTTTATAGAGGGCAATGT  588

Query  121  TCTAACAACTGA  132
            ||||||||||||
Sbjct  589  TCTAACAACTGA  600


>Nitab4.5_0007415g0050.1 Rossmann-like alpha/beta/alpha sandwich fold, Cytidyltransferase-like 
domain, Probable nicotinate-nucleotide adenylyltransferase
Length=663

 Score = 239 bits (129),  Expect = 7e-63
 Identities = 131/132 (99%), Gaps = 0/132 (0%)
 Strand=Plus/Plus

Query  1    AATGGAATCAGTTCAACGGGATTAAGGGACTGCATCTCGAAAGGGTTCTCAGTGAAGTAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  532  AATGGAATCAGTTCAACGGGATTAAGGGACTGCATCTCGAAAGGGTTATCAGTGAAGTAC  591

Query  61   TTGACAGCCGATGAAGTAATTGATTATATGAAACAACATAACCTTTATAGAGGGCAATGT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  TTGACAGCCGATGAAGTAATTGATTATATGAAACAACATAACCTTTATAGAGGGCAATGT  651

Query  121  TCTAACAACTGA  132
            ||||||||||||
Sbjct  652  TCTAACAACTGA  663



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 8176392584


  Database: Nitab v4.5 cDNA Edwards2017
    Posted date:  Mar 21, 2024  4:12 PM
  Number of letters in database: 76,611,276
  Number of sequences in database:  69,500



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5