BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: S. pimpinellifolium CDS LA1589 34,727 sequences; 35,973,059 total letters Query= Untitled_sequence Length=1461 Score E Sequences producing significant alignments: (Bits) Value Sopim04g079840.0.1LIM domain-binding protein (AHRD V1 *--* B0WXP3... 2699 0.0 Sopim02g089930.0.1Homeobox protein LIM-3 (Fragment) (AHRD V1 *---... 512 2e-144 Sopim03g079910.0.1Zinc ion binding protein (AHRD V1 **-- D7LDT1_A... 239 5e-62 Sopim05g052910.0.1Actin-binding LIM protein 1 (AHRD V1 *--- ABLM1... 224 1e-57 Sopim04g079850.0.1Pentatricopeptide repeat-containing protein (AH... 185 6e-46 >Sopim04g079840.0.1 LIM domain-binding protein (AHRD V1 *--* B0WXP3_CULQU); contains Interpro domain(s) IPR001781 Zinc finger, LIM-type Length=1461 Score = 2699 bits (1461), Expect = 0.0 Identities = 1461/1461 (100%), Gaps = 0/1461 (0%) Strand=Plus/Plus Query 1 ATGGGCTGGTTGAACAAAATTTTTAGAGGTTCTAGCCATAAAATTTCGGAAGGCCAGTAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGGCTGGTTGAACAAAATTTTTAGAGGTTCTAGCCATAAAATTTCGGAAGGCCAGTAT 60 Query 61 GACTGGAGATGTGAAGGACATACAGAGGAGGATGACCCATCTACAGCAGAGGACTCTTGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GACTGGAGATGTGAAGGACATACAGAGGAGGATGACCCATCTACAGCAGAGGACTCTTGG 120 Query 121 TCAGAGATTGAAGAAATAGATCGAGCTATTGCTATATCTCTCTCGGAGGAGGAACAGAAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCAGAGATTGAAGAAATAGATCGAGCTATTGCTATATCTCTCTCGGAGGAGGAACAGAAA 180 Query 181 GGGAAAATTGTGATTGATAGTGAATCACAACTGAAAGAAGATGAACAACTTGCAAGAGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGGAAAATTGTGATTGATAGTGAATCACAACTGAAAGAAGATGAACAACTTGCAAGAGCT 240 Query 241 CTGCAGGAAAGCTTGAATGTCGAATCTCCACCTCAGCATGTAAGCAGAAATGATCACGGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGCAGGAAAGCTTGAATGTCGAATCTCCACCTCAGCATGTAAGCAGAAATGATCACGGA 300 Query 301 GGCGGGAATGTATATGGGAATGGAAACTTCTATCATCCAGTACCTTTCCCATATTCTGCA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GGCGGGAATGTATATGGGAATGGAAACTTCTATCATCCAGTACCTTTCCCATATTCTGCA 360 Query 361 AGCTTTAGGGTATGTGCAGGTTGCAGCACTGAAATAGGTCATGGACGATTTTTGAGTTGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AGCTTTAGGGTATGTGCAGGTTGCAGCACTGAAATAGGTCATGGACGATTTTTGAGTTGC 420 Query 421 ATGGGAGCGGTATGGCATCCAGAGTGCTTTAGATGCCATGCCTGTAACCAGCCAATATCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 ATGGGAGCGGTATGGCATCCAGAGTGCTTTAGATGCCATGCCTGTAACCAGCCAATATCT 480 Query 481 GATTATGAGTTCTCAATGTCTGGGAACTATCCCTATCACAAAACATGCTACAAGGAGCAT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GATTATGAGTTCTCAATGTCTGGGAACTATCCCTATCACAAAACATGCTACAAGGAGCAT 540 Query 541 TATCACCCGAAATGTGATGTGTGCAAACACTTTATTCCAACAAATGCAGCTGGGCTTATT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TATCACCCGAAATGTGATGTGTGCAAACACTTTATTCCAACAAATGCAGCTGGGCTTATT 600 Query 601 GAATACAGAGCACATCCATTTTGGTCCCAGAAGTATTGTCCTTTTCATGAGCATGATGGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GAATACAGAGCACATCCATTTTGGTCCCAGAAGTATTGTCCTTTTCATGAGCATGATGGA 660 Query 661 ACACCCCGTTGCTGTAGCTGTGAGCGAATGGAGCCACGGGATACAAGATATATTGCCCTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 ACACCCCGTTGCTGTAGCTGTGAGCGAATGGAGCCACGGGATACAAGATATATTGCCCTT 720 Query 721 GATGATGGTCGAAAGCTCTGTCTAGAATGCTTGGACTCTGCGATAATGGATACGAGTCAG 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 GATGATGGTCGAAAGCTCTGTCTAGAATGCTTGGACTCTGCGATAATGGATACGAGTCAG 780 Query 781 TGTCAGCCCCTTTATTATGATATACAAGAATTCTATGAAGGGCTAAATATGAAAGTGGAG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 TGTCAGCCCCTTTATTATGATATACAAGAATTCTATGAAGGGCTAAATATGAAAGTGGAG 840 Query 841 CAGAAAGTTCCTTTGCTTCTGGTTGAGAGACAAGCATTGAATGAGGCTATGGATGGAGAG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CAGAAAGTTCCTTTGCTTCTGGTTGAGAGACAAGCATTGAATGAGGCTATGGATGGAGAG 900 Query 901 AGACATGGTTATCACCACATGCCCGAGACAAGGGGACTTTGCCTTTCCGAGGAACAAACT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 AGACATGGTTATCACCACATGCCCGAGACAAGGGGACTTTGCCTTTCCGAGGAACAAACT 960 Query 961 ATCAGCACTATACAAAGACGGCCAAGAATAGGAGCTGGAAATCGGGTTATGGACATGAGA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ATCAGCACTATACAAAGACGGCCAAGAATAGGAGCTGGAAATCGGGTTATGGACATGAGA 1020 Query 1021 ACGGAACCTTATAAATTGACACGCCGCTGTGAAGTGACTGCAATTCTTATTTTATATGGT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 ACGGAACCTTATAAATTGACACGCCGCTGTGAAGTGACTGCAATTCTTATTTTATATGGT 1080 Query 1081 CTACCAAGGTTGCTGACTGGGTCAATACTTGCGCATGAGATGATGCATGCGTGGCTTCGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CTACCAAGGTTGCTGACTGGGTCAATACTTGCGCATGAGATGATGCATGCGTGGCTTCGA 1140 Query 1141 CTAAGAGGTTATCGAACTCTTAGCCAAGACGTTGAAGAAGGCATTTGCCAGGTACTAGCA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 CTAAGAGGTTATCGAACTCTTAGCCAAGACGTTGAAGAAGGCATTTGCCAGGTACTAGCA 1200 Query 1201 CATATGTGGTTAGAAACCCAAATTGCATCCATATCAAGCAGCAATGGAGGGGCTTCAACC 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 CATATGTGGTTAGAAACCCAAATTGCATCCATATCAAGCAGCAATGGAGGGGCTTCAACC 1260 Query 1261 TCATCAGGCATGTCATCATCAAAGCAGGGTATTAGATCTCCTTTCGAGAGGAAACTCGGG 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 TCATCAGGCATGTCATCATCAAAGCAGGGTATTAGATCTCCTTTCGAGAGGAAACTCGGG 1320 Query 1321 GATTTTTTCAAACACCAGATTGAATCAGACACTTCGCCAATTTATGGAAACGGATTCAGA 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 GATTTTTTCAAACACCAGATTGAATCAGACACTTCGCCAATTTATGGAAACGGATTCAGA 1380 Query 1381 GCTGGTAACCAAGCAGTGCTTAAGTACGGACTAGAAAGGACGTTGGATCATATTCGGATG 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 GCTGGTAACCAAGCAGTGCTTAAGTACGGACTAGAAAGGACGTTGGATCATATTCGGATG 1440 Query 1441 ACAGGAACCTTTCCTTATTAA 1461 ||||||||||||||||||||| Sbjct 1441 ACAGGAACCTTTCCTTATTAA 1461 >Sopim02g089930.0.1 Homeobox protein LIM-3 (Fragment) (AHRD V1 *--- O42286_DANRE); contains Interpro domain(s) IPR001781 Zinc finger, LIM-type Length=1548 Score = 512 bits (277), Expect = 2e-144 Identities = 660/849 (78%), Gaps = 9/849 (1%) Strand=Plus/Plus Query 366 TAGGGTATGTGCAGGTTGCAGCACTGAAATAGGTCATGGACGATTTTTGAGTTGCATGGG 425 |||||| ||||| ||||||| ||||||| || |||||| ||| ||| ||||||||||| Sbjct 432 TAGGGTCTGTGCCGGTTGCAATGCTGAAATTGGACATGGAAGATATTTAAGTTGCATGGG 491 Query 426 AGCGGTATGGCATCCAGAGTGCTTTAGATGCCATGCCTGTAACCAGCCAATATCTGATTA 485 ||| || ||||||||||| || || | ||||||| || || || ||||| || || || Sbjct 492 AGCTGTTTGGCATCCAGAATGTTTCCGTTGCCATGGTTGCAATCAACCAATTTCCGACTA 551 Query 486 TGAGTTCTCAATGTCTGGGAACTATCCCTATCACAAAACATGCTACAAGGAGCATTATCA 545 |||||| |||||||| | ||| ||| || || ||| ||||||||||||| || |||| Sbjct 552 TGAGTTTTCAATGTCAGATAACCGTCCATACCATAAATCATGCTACAAGGAACAGCATCA 611 Query 546 CCCGAAATGTGATGTGTGCAAACACTTTATTCCAACAAATGCAGCTGGGCTTATTGAATA 605 ||| ||||||||||| ||||| |||||||||||||||| | ||||| || |||||||| Sbjct 612 CCCAAAATGTGATGTATGCAAGAGCTTTATTCCAACAAATCCGGCTGGTCTAATTGAATA 671 Query 606 CAGAGCACATCCATTTTGGTCCCAGAAGTATTGTCCTTTTCATGAGCATGATGGAACACC 665 || || ||||| || ||| ||||||||||| || | ||||| |||||| || || Sbjct 672 TAGGGCTCATCCTTTCTGGCTTCAGAAGTATTGCCCATCACATGAAACTGATGGGACGCC 731 Query 666 CCGTTGCTGTAGCTGTGAGCGAATGGAGCCACGG-GATACAAGATATATTGCCCTTGATG 724 ||||| || || |||||| |||||||||| || ||| | |||||| | ||||| | Sbjct 732 TCGTTGTTGCAGTTGTGAGAGAATGGAGCC-CGTAGATGCCAGATATCTGATACTTGAAG 790 Query 725 ATGGTCGAAAGCTCTGTCTAGAATGCTTGGACTCTGCGATAATGGATACGAGTCAGTGTC 784 ||||| | ||||| |||||||| |||||||||||| | |||||||| || | | |||| Sbjct 791 ATGGTAGGAAGCTGTGTCTAGAGTGCTTGGACTCTTCAATAATGGACACTCATGAATGTC 850 Query 785 AGCCCCTTTATTATGATATACAAGAATTCTATGAAGGGCTAAATATGAAAGTGGAGCAGA 844 | ||||||||| ||| ||||||||||| |||||||| ||||||||||||| |||||| Sbjct 851 AACCCCTTTATCTTGAGATACAAGAATTTTATGAAGGTTTAAATATGAAAGTAGAGCAGC 910 Query 845 AAGTTCCTTTGCTTCTGGTTGAGAGACAAGCATTGAATGAGGCTATGGATGGAGAGA-GA 903 || ||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| | || Sbjct 911 AAATTCCTTTGCTTCTAGTTGAAAGACAAGCATTAAATGAAGCAATGGAAGGAGAAAAGA 970 Query 904 CATGGTTATCACCACATGCCCGAGACAAGGGGACTTTGCCTTTCCGAGGAACAAACTATC 963 | ||| |||| |||||||| ||||| | ||||| ||||| ||||||||||| || || Sbjct 971 -ACGGTCATCATCACATGCCTGAGACTCGAGGACTCTGCCTGTCCGAGGAACAGACCATT 1029 Query 964 AGCACTATA-CAAAGACGGCCAAGAATAGGAGCTGGAAATCGGGTTATGGACATGAGAAC 1022 |||| ||| ||| || | ||| | || || ||| ||||| || | || ||| || Sbjct 1030 AGCAGTATTTCAAGGA-GACCACGGATTGG---TGGTTATCGGATTTTAGATATGTTTAC 1085 Query 1023 GGAACCTTATAAATTGACACGCCGCTGTGAAGTGACTGCAATTCTTATTTTATATGGTCT 1082 || ||||| | || | || | |||||||||||| || ||||| ||||| |||||||| Sbjct 1086 AGAGCCTTACAGGTTAATTCGACACTGTGAAGTGACAGCTATTCTAATTTTGTATGGTCT 1145 Query 1083 ACCAAGGTTGCTGACTGGGTCAATACTTGCGCATGAGATGATGCATGCGTGGCTTCGACT 1142 || ||||| ||||||| ||||| || || ||||| ||||||||||| ||| | || || Sbjct 1146 TCCTAGGTTATTGACTGGTTCAATTCTGGCTCATGAAATGATGCATGCATGGTTGCGGCT 1205 Query 1143 AAGAGGTTATCGAACTCTTAGCCAAGACGTTGAAGAAGGCATTTGCCAGGTACTAGCACA 1202 | |||||||| | | | || | ||| || |||||||| || ||||| || |||| || Sbjct 1206 TAAAGGTTATCCGAGTTTAAGTCCAGAAGTGGAAGAAGGTATCTGCCAAGTTTTAGCTCA 1265 Query 1203 TATGTGGTT 1211 |||||||| Sbjct 1266 CATGTGGTT 1274 Score = 87.9 bits (47), Expect = 2e-16 Identities = 116/150 (77%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 1301 CTTTCGAGAGGAAACTCGGGGATTTTTTCAAACACCAGATTGAATCAGACACTTCGCCAA 1360 |||| |||| |||||| || |||||||| || ||||| ||||||||||| || || || Sbjct 1389 CTTT-GAGAAGAAACTGGGTGATTTTTTTAAGCACCAAATTGAATCAGATACATCAGCAG 1447 Query 1361 TTTATGGAAACGGATTCAGAGCTGGTAACCAAGCAGTGCTTAAGTACGGACTAGAAAGGA 1420 |||||| | |||||||||| |||||| | |||||||| ||||| || || | | || Sbjct 1448 CTTATGGGGATGGATTCAGAGAAGGTAACAAGGCAGTGCTCAAGTATGGCCTTAAGACGA 1507 Query 1421 CGTTGGATCATATTCGGATGACAGGAACCT 1450 | | ||||| || ||| | |||||||||| Sbjct 1508 CACTTGATCACATCCGGCTTACAGGAACCT 1537 >Sopim03g079910.0.1 Zinc ion binding protein (AHRD V1 **-- D7LDT1_ARALY); contains Interpro domain(s) IPR001781 Zinc finger, LIM-type Length=1650 Score = 239 bits (129), Expect = 5e-62 Identities = 568/781 (73%), Gaps = 25/781 (3%) Strand=Plus/Plus Query 412 TTGAGTTGCATGGGAGCGGTATGGCATCCAGAGTGCTTTAGATGCCATGCCTGTAACCAG 471 ||| | ||||||||| | | | ||||||||||||||| || | ||||||| | Sbjct 598 TTGGGGTGCATGGGAACTTTCTTTCATCCAGAGTGCTTTCTTTGTCGTGCCTGTGGTTAC 657 Query 472 CCAATATCTGATTATGAGTTCTCAATGTCTGGGAACTATCCCTATCACAAAACATGCTAC 531 ||||| |||| ||||||| || |||| |||||| || | ||||||||| |||||| | Sbjct 658 CCAATTACTGAACATGAGTTTTCTTTGTCAGGGAACAATACGTATCACAAATCATGCTTC 717 Query 532 AAGGAGCATTA-TCACCCGAAATGTGATGTGTGCAAACACTTTATTCCAACAAATGCAGC 590 | ||| || | |||||| |||||||| || ||| || ||||| |||||||||||||| Sbjct 718 AGGGAA-ATGACTCACCCCAAATGTGAAGTTTGCTTCCAATTTATCCCAACAAATGCAGC 776 Query 591 TGGGCTT-ATTGAATACAGA-GCACATCCATTTTGGTCCCAGAAGTATTGTCCTTTTCAT 648 || ||| ||||| || || || || || |||||||| ||||| |||||||||| || Sbjct 777 AGG-CTTGATTGAGTATAGGTGC-CACCCGTTTTGGTCTCAGAAATATTGTCCTTCACAC 834 Query 649 GAGCATGATGGAACACCCCGTTGCTGTAGCTGTGAGCGAATGGAGCCACGGGATACAAGA 708 |||||||||| || || |||||||| ||||| || |||||||| || || ||||| Sbjct 835 GAGCATGATGTCACCAAACGATGCTGTAGTTGTGAACGTCTGGAGCCATGGAATGCAAGA 894 Query 709 TATATTGCCCTTGATGATGGTCGAAAGCTC-TGTCTAGAATGCTTGGACTCTGCGATAAT 767 ||| | | |||| |||||| ||| ||| || |||| ||| |||| ||||| || || Sbjct 895 TATGTATCACTTGGGGATGGTAGAA-GCTTATGCTTAGAGTGCATGGAATCTGCCATCAT 953 Query 768 GGATACGAGTCAGTGTCAGCCCCTTTATTATGATATACA-AGAATTCTATGAAGGGCTAA 826 |||||| | | || || || ||||| ||| || || ||| | |||||||| | | Sbjct 954 GGATACTGGGGATTGCCAACCACTTTACCATGCCAT-CAGAGACTATTATGAAGGCATGA 1012 Query 827 ATATGAAAGTGGAGCAGAAAGTTCCTTTGCTTCTGGTTGAGAGACAAGCATTGAATGAGG 886 | |||||| | || ||| |||||||| ||||||| ||||| |||||||| | ||||| | Sbjct 1013 ACATGAAAATAGAACAGCAAGTTCCTATGCTTCTTGTTGAAAGACAAGCCCTTAATGAAG 1072 Query 887 CTATGGATGGAGAGAGACATGGTTATCACCACATGCCCGAGACAAGGGGACTTTGCCTTT 946 | || || || || | ||||||| || || |||||||| || || || | ||||| | Sbjct 1073 CCATTGAAGGGGAAAAGCATGGTTTCCATCATATGCCCGAAACCAGAGGTTTATGCCTAT 1132 Query 947 CCGAGGAACAAACTATCAGCACTATACA-AAGACGGCCAAGAATAGGAGCTGGAAATCG- 1004 | || || || || ||| || ||||| |||| |||| ||||| || | ||| ||| Sbjct 1133 CAGAAGAGCAGACAGTCACCAGTATACTCAAGA-GGCCGAGAAT-GG-G-TGG---TCGT 1185 Query 1005 G-GTTA-TGGACATGAGAACGGAACCTTATAAATTGACACGCCGCTGTGAAGTGACTGCA 1062 | || ||| || ||||| | ||| | || | || | |||||||| || || Sbjct 1186 GAAGTAGTGGGAATCAGAACACACCCTCAGAAGCTAACTAGAAAGTGTGAAGTTACAGCT 1245 Query 1063 ATTCT--TATTTTATATGGTCTACCAAGGTTGCTGACTGGGTCAATACTTGCGCATGAGA 1120 ||||| |||| | | |||||||||||| || || ||||| | || ||||| ||||| Sbjct 1246 ATTCTAGTATTGT-T-TGGTCTACCAAGATTACTTACTGGTGCTATTCTTGCTCATGAAC 1303 Query 1121 TGATGCATGCGTGGCTTCGACTAAGAGGTTATCGAACTCTTAGCCAAGACGTTGAAGAAG 1180 |||||||||| ||| | || |||| ||| || || | ||| |||| || || || |||| Sbjct 1304 TGATGCATGCATGGTTACGTCTAAAAGGATACCGTAATCTCAGCCTTGAGGTAGAGGAAG 1363 Query 1181 G 1181 | Sbjct 1364 G 1364 >Sopim05g052910.0.1 Actin-binding LIM protein 1 (AHRD V1 *--- ABLM1_MOUSE); contains Interpro domain(s) IPR001781 Zinc finger, LIM-type Length=1515 Score = 224 bits (121), Expect = 1e-57 Identities = 544/749 (73%), Gaps = 25/749 (3%) Strand=Plus/Plus Query 472 CCAATATCTGATTATGAGTTCTCAATGTCTGGGAACTATCCCTATCACAAAACATGCTAC 531 ||||| |||| || ||||| || |||| |||||| || | ||||| || |||||| | Sbjct 520 CCAATTACTGAATACGAGTTTTCTTTGTCAGGGAACAATACATATCATAAGTCATGCTTC 579 Query 532 AAGGAGCATTA-TCACCCGAAATGTGATGTGTGCAAACACTTTATTCCAACAAATGCAGC 590 ||||| || | ||| || |||||||| || ||| | || ||||| |||||||| | ||| Sbjct 580 AAGGA-AATGACTCATCCAAAATGTGAAGTCTGCCATCAATTTATCCCAACAAACGGAGC 638 Query 591 TGGGCTT-ATTGAATACAGA-GCACATCCATTTTGGTCCCAGAAGTATTGTCCTTTTCAT 648 ||| ||| || || |||||| || || ||||||||||| || || ||||| ||| ||| Sbjct 639 TGG-CTTGATCGAGTACAGATGC-CACCCATTTTGGTCTCAAAAATATTGCCCTGCACAT 696 Query 649 GAGCATGATGGAACACCC--CGTTGCTGTAGCTGTGAGCGAATGGAGCCACGGGATACAA 706 ||| |||| |||||| || |||||||| ||||| || ||||| ||||| || ||| Sbjct 697 GAGAATGAC--AACACCAAACGGTGCTGTAGTTGTGAACGTCTGGAGTCACGGAATGCAA 754 Query 707 GATATATTGCCCTTGATGATGGTCGAAAGCTC-TGTCTAGAATGCTTGGACTCTGCGATA 765 ||||||| | |||| |||||||| | ||| || |||| ||| |||| ||||| || Sbjct 755 GATATATGTCACTTGGAGATGGTCGGA-GCTTATGCTTAGAGTGCATGGAATCTGCAATC 813 Query 766 ATGGATACGAGTCAGTGTCAGCCCCTTTATTATGATATACA-AGAATTCTATGAAGGGCT 824 |||||||| | | || ||||| ||||| || || || ||| | |||||||| | Sbjct 814 ATGGATACTGGGGACTGCCAGCCACTTTACCATTCCAT-CAGAGACTATTATGAAGGCAT 872 Query 825 AAATATGAAAGTGGAGCAGAAAGTTCCTTTGCTTCTGGTTGAGAGACAAGCATTGAATGA 884 || |||||| | || ||| |||||||| ||||||| ||||| ||||| || | ||||| Sbjct 873 GAACATGAAAATAGATCAGCAAGTTCCTATGCTTCTTGTTGAAAGACATGCCCTTAATGA 932 Query 885 GGCTATGGATGGAGAGAGACATGGTTATCACCACATGCCCGAGACAAGGGGACTTTGCCT 944 ||| || || || |||| |||||| || || ||||| || || || || || ||||| Sbjct 933 GGCCATTGAAGGGGAGAAGCATGGTCTCCATCATATGCCTGAAACTAGAGGTCTATGCCT 992 Query 945 TTCCGAGGAACAAACTATCAGCACTATACAAAGACGGCCAAGAATAGGAGCTGGAAATCG 1004 || || || ||||| ||| || ||||| ||| |||||| ||| | | ||| ||| Sbjct 993 ATCAGAAGAGCAAACAGTCACCAGTATACTCAGAAGGCCAA-AATTTG-G-TGG---TCG 1046 Query 1005 -GG-TTA-T-GGACATGAGAACGGAACCTTATAAATTGACACGCCGCTGTGAAGTGACTG 1060 || ||| | ||| || ||||| | ||| | || | | | | |||||||| || | Sbjct 1047 TGGATTAATAGGA-ATCAGAACACATCCTCAAAAGCTAATTAGAAGATGTGAAGTTACAG 1105 Query 1061 CAATTCTTATTTTATATGGTCTACCAAGGTTGCTGACTGGGTCAATACTTGCGCATGAGA 1120 | || || | |||| || || ||||| || || ||||| | || || || ||||| Sbjct 1106 CTATCCTAGTAATATACGGCCTCCCAAGATTACTTACTGGTGCCATTCTAGCTCATGAAC 1165 Query 1121 TGATGCATGCGTGGCTTCGACTAAGAGGTTATCGAACTCTTAGCCAAGACGTTGAAGAAG 1180 |||||||||| ||| | || |||| ||| ||||| | ||| | || || || ||||||| Sbjct 1166 TGATGCATGCCTGGTTACGTCTAAAAGGATATCGTAATCTCACCCCTGAAGTCGAAGAAG 1225 Query 1181 GCATTTGCCAGGTACTAGCACATATGTGG 1209 | || ||||| || || |||| |||||| Sbjct 1226 GAATCTGCCAAGTGCTTTCACACATGTGG 1254 >Sopim04g079850.0.1 Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KHC1_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat Length=2796 Score = 185 bits (100), Expect = 6e-46 Identities = 121/131 (92%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 1273 TCATCATCAAAGCAGGGTATTAGATCTCCTTTCGAGAGGAAACTCGGGGATTTTTTCAAA 1332 ||||||||||||||||| ||| |||||||||||||||||||||||||||||| || ||| Sbjct 2660 TCATCATCAAAGCAGGG-ATTGGATCTCCTTTCGAGAGGAAACTCGGGGATTCCTTTAAA 2718 Query 1333 CACCAGATTGAATCAGACACTTCGCCAATTTATGGAAACGGATTCAGAGCTGGTAACCAA 1392 ||||||| |||||||||||| ||||||||||||||| || ||||||||||||||||||| Sbjct 2719 CACCAGAATGAATCAGACACCTCGCCAATTTATGGATACAGATTCAGAGCTGGTAACCAG 2778 Query 1393 GCAGTGCTTAA 1403 ||||||||||| Sbjct 2779 GCAGTGCTTAA 2789 Score = 163 bits (88), Expect = 3e-39 Identities = 103/110 (94%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 1087 AGGTTGCTGACTGGGTCAATACTTGCGCATGAGATGATGCATGCGTGGCTTCGACTAAGA 1146 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 2542 AGGTTCCTGACTGGGTCAATCTTTGCGCATGAGATGATGCATGCATGGCTTCGACTAAGA 2601 Query 1147 GGTTATCGAACTCTTAGCCAAGACGTTGAAGAAGGCATTTGCCAGGTACT 1196 ||||||||||| |||||||||||||||||||||| |||||||| |||||| Sbjct 2602 GGTTATCGAACACTTAGCCAAGACGTTGAAGAAGACATTTGCC-GGTACT 2650 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50410613424 Database: S. pimpinellifolium CDS LA1589 Posted date: Mar 21, 2024 4:05 PM Number of letters in database: 35,973,059 Number of sequences in database: 34,727 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5