BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1389 Score E Sequences producing significant alignments: (Bits) Value Solyc05g054650.1.1 848 0.0 Solyc05g054660.2.1 527 8e-149 Solyc05g055500.1.1 84.2 2e-15 Solyc11g073075.1.1 76.8 3e-13 Solyc11g066400.1.1 71.3 2e-11 >Solyc05g054650.1.1 Length=459 Score = 848 bits (459), Expect = 0.0 Identities = 459/459 (100%), Gaps = 0/459 (0%) Strand=Plus/Minus Query 401 TCACAAAAAGCAATCAACTATAGGATTTGCCTTCTTCAACTTGAACTCTAAATCATTTTC 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459 TCACAAAAAGCAATCAACTATAGGATTTGCCTTCTTCAACTTGAACTCTAAATCATTTTC 400 Query 461 CAATGGTGTTAAGTTCAAATCCAAACACAAAACTCTTGGATTATTTGATGATTTCTTCAT 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 399 CAATGGTGTTAAGTTCAAATCCAAACACAAAACTCTTGGATTATTTGATGATTTCTTCAT 340 Query 521 AACATCGTGATTAGGAACTTGATTATTATTATTATTATTTTCATTTAACATACCTCTATG 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339 AACATCGTGATTAGGAACTTGATTATTATTATTATTATTTTCATTTAACATACCTCTATG 280 Query 581 TCTTCTCATATGTCCACCTAAAGCTTGTCCAATAGGAAATTCAAGTCCACAAATTGAACA 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 TCTTCTCATATGTCCACCTAAAGCTTGTCCAATAGGAAATTCAAGTCCACAAATTGAACA 220 Query 641 CTCATGTGTTTTTGGCTTAGGCGGTGAAATCGGCAAATGAAAATTCATTTCTCCCATTAA 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 219 CTCATGTGTTTTTGGCTTAGGCGGTGAAATCGGCAAATGAAAATTCATTTCTCCCATTAA 160 Query 701 TCTCGGCTTTTTATGACTTGCTCGATGACCACCTAGTGCTTGAAACGATGAAAATTGTCT 760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 TCTCGGCTTTTTATGACTTGCTCGATGACCACCTAGTGCTTGAAACGATGAAAATTGTCT 100 Query 761 ATTACAAGTCTTGCACTCGAAAACTCGACTAGGAGAGTTGTTTACCATAGTGTTGAAATG 820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 99 ATTACAAGTCTTGCACTCGAAAACTCGACTAGGAGAGTTGTTTACCATAGTGTTGAAATG 40 Query 821 ATTTTCTTGACGTGAAAATAACATCAAGTAATTTGCCAT 859 ||||||||||||||||||||||||||||||||||||||| Sbjct 39 ATTTTCTTGACGTGAAAATAACATCAAGTAATTTGCCAT 1 >Solyc05g054660.2.1 Length=501 Score = 527 bits (285), Expect = 8e-149 Identities = 307/318 (97%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 542 ATTATTATTATTATTATTTTCATTTAACATACCTCTATGTCTTCTCATATGTCCACCTAA 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 318 ATTATTATTATTATTATTTTCATTCAACATACCTCTATGTCTTCTCATATGTCCACCTAA 259 Query 602 AGCTTGTCCAATAGGAAATTCAAGTCCACAAATTGAACACTCATGTGTTTTTGGCTTAGG 661 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 AGCTTGTCCTATAGGAAATTCAAGTCCACAAATTGAACACTCATGTGTTTTTGGCTTAGG 199 Query 662 CGGTGAAATCGGCAAATGAAAATTCATTTCTCCCATTAATCTCGGCTTTTTATGACTTGC 721 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 198 TGGTGAAATCGGCAAATGAAAATTCATTTCTCCCATTAATCTTGGCTTTTTATGACTTGC 139 Query 722 TCGATGACCACCTAGTGCTTGAAACGATGAAAATTGTCTATTACAAGTCTTGCACTCGAA 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 138 TCGATGACCACCTAGTGCTTGAAACGATGAAAATTGTCTATTACAAGTCTTGCACTCGAA 79 Query 782 AACTCGACTAGGAGAGTTGTTTACCATAGTGTTGAAATGATTTTCTTGACGTGAAAATAA 841 ||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||| || Sbjct 78 AACTCGATTAGGAGAGTTGTTCACCATAGTGTTAAAATGATTTTCTTGAGATGAAAACAA 19 Query 842 CATCAAGTAATTTGCCAT 859 |||||||||||||| ||| Sbjct 18 CATCAAGTAATTTGTCAT 1 Score = 119 bits (64), Expect = 6e-26 Identities = 136/169 (80%), Gaps = 12/169 (7%) Strand=Plus/Minus Query 403 ACAAAAAGCAATCAACTATAGGATTTGCCTTCTTCAACTTGA---ACTCT-AA--ATCAT 456 |||| || ||||||||| ||||| | | ||||||||||||| | ||| || ||||| Sbjct 499 ACAAGAAACAATCAACTTTAGGAGCTTCTTTCTTCAACTTGATCAATTCTAAATGATCAT 440 Query 457 TTTCCAATGGTGTTAAGTTCAAATCCAAACACAAAACTCTTGGATTATTTGATGATTTCT 516 ||||||||||||| || || ||||||||||| |||||||||||||| ||| | |||||| Sbjct 439 TTTCCAATGGTGTCAAATTTAAATCCAAACATAAAACTCTTGGATT-TTT--TAATTTCT 383 Query 517 TCATAACATCGTGATTAGGAACTTGATTATTATTATTATTATTTTCATT 565 ||| ||||| | |||| | || |||||||||||||||||| | ||| Sbjct 382 TCAAAACATTATTATTA-TTA-TT-ATTATTATTATTATTATTATTATT 337 >Solyc05g055500.1.1 Length=1089 Score = 84.2 bits (45), Expect = 2e-15 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 708 TTTTTATGACTTGCTCGATGACCACCTAGTGCTTGAAACGATGAAAATTGT-CTATTACA 766 |||||||||||||||| || ||||||||||||||||||||||| ||| || || ||||| Sbjct 527 TTTTTATGACTTGCTCTGTGTCCACCTAGTGCTTGAAACGATGAGAAT-GTCCTGTTACA 469 Query 767 AGTCTTGCACTCG 779 |||||||| ||| Sbjct 468 TGTCTTGCATTCG 456 >Solyc11g073075.1.1 Length=492 Score = 76.8 bits (41), Expect = 3e-13 Identities = 79/97 (81%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 690 TCTCCCATTAATCTCGGCTTTTTAT---GACTTGCTCGATGACCACCTAGTGCTTGAAAC 746 |||||||||||||| |||||||||| ||||||| |||||||| |||| ||||| || Sbjct 230 TCTCCCATTAATCTTGGCTTTTTATTATGACTTGCACGATGACCGCCTAAGGCTTGGAAA 171 Query 747 GATGAAAATTGTCTATTACAAGTCTTGCACTCGAAAA 783 |||| || || |||| ||||||||||| || |||| Sbjct 170 GATGGGAAGCGTTTATTGCAAGTCTTGCATTC-AAAA 135 >Solyc11g066400.1.1 Length=885 Score = 71.3 bits (38), Expect = 2e-11 Identities = 63/75 (84%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 705 GGCTTTTTATGACTTGCTCGATGACCACCTAGTGCTTGAAACGA-TGAAAATTGTCTATT 763 |||||||| |||||||||| ||| ||||| ||||||||||| || | |||| | |||||| Sbjct 482 GGCTTTTTGTGACTTGCTCTATGTCCACCAAGTGCTTGAAATGAATTAAAAGT-TCTATT 424 Query 764 ACAAGTCTTGCACTC 778 ||||| || ||||| Sbjct 423 GCAAGTTTTACACTC 409 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46569319720 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5