BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Untitled_sequence Length=921 Score E Sequences producing significant alignments: (Bits) Value Solyc03g112930.2Dof zinc finger protein-like (AHRD V1 ***- Q0WPR9... 115 6e-25 Solyc02g090310.1Dof zinc finger protein 4 (AHRD V1 *-*- A5HWF3_HO... 100 2e-20 Solyc05g054510.1Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLT... 99.0 6e-20 Solyc00g024680.1Dof zinc finger protein (AHRD V1 ***- Q9M4G1_SOLT... 99.0 6e-20 Solyc03g121400.1Dof zinc finger protein14 SlDof14 97.1 2e-19 Solyc11g010940.1Dof zinc finger protein 6 (AHRD V1 *-*- A5HWF5_HO... 95.3 8e-19 Solyc04g079570.1Dof zinc finger protein (AHRD V1 *-*- Q0PY33_SOLL... 91.6 1e-17 Solyc02g065290.1Dof zinc finger protein2 SlDof2 84.2 2e-15 Solyc04g070960.1Dof zinc finger protein 9 (AHRD V1 *-*- A5HWF8_HO... 82.4 6e-15 Solyc02g090220.2Dof zinc finger protein (AHRD V1 *-*- Q9SXG5_ORYS... 82.4 6e-15 Solyc10g086440.1Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLT... 78.7 8e-14 Solyc02g077950.1Dof zinc finger protein5 SlDof5 76.8 3e-13 Solyc06g062520.1Dof zinc finger protein 4 (AHRD V1 *-*- A5HWF3_HO... 75.0 1e-12 Solyc11g072500.1Dof zinc finger protein 12 (AHRD V1 *-*- A5HWG1_H... 73.1 4e-12 Solyc02g077960.1Dof zinc finger protein 12 (AHRD V1 *-*- A5HWG1_H... 73.1 4e-12 Solyc09g010680.2Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLT... 71.3 1e-11 Solyc06g076030.2Dof zinc finger protein (AHRD V1 ***- Q9M4G1_SOLT... 71.3 1e-11 >Solyc03g112930.2 Dof zinc finger protein-like (AHRD V1 ***- Q0WPR9_ARATH); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=1372 Score = 115 bits (62), Expect = 6e-25 Identities = 123/152 (81%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 103 AAGTGTCCTCGTTGCGATTC-GCTCAACACTAAATTCTGTTACTATAACAACTATAATCT 161 ||||||||||||||||| || ||| | || |||||||||||||| ||||| || | ||| Sbjct 355 AAGTGTCCTCGTTGCGACTCTACTC-ATACAAAATTCTGTTACTACAACAATTACAGTCT 413 Query 162 CTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTAC- 220 | |||| || | |||||||||||| ||| || ||||||||||||||||||||| || Sbjct 414 CACTCAACCTAGATACTTCTGCAAGACTTGTCGTAGGTACTGGACTAAAGGCGGC--ACG 471 Query 221 TC-CGTAACGTCCCCGTCGGTGGTGGTTGCCG 251 | || ||| |||| || |||||||| ||||| Sbjct 472 TTACGAAACATCCCTGTTGGTGGTGGCTGCCG 503 >Solyc02g090310.1 Dof zinc finger protein 4 (AHRD V1 *-*- A5HWF3_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=783 Score = 100 bits (54), Expect = 2e-20 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 106 TGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTATAATCTCTCT 165 ||||| ||||| ||||| | ||||| || || |||||||| |||||||| ||| | || Sbjct 151 TGTCCGCGTTGTGATTCCCCAAACACCAAGTTTTGTTACTACAACAACTACAATTTAACT 210 Query 166 CAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTACTCCGT 225 ||||| ||||| |||||||||| ||| || | || ||||||||||| |||| | || Sbjct 211 CAGCCTCGTCATTTCTGCAAGACTTGTCGACGTTATTGGACTAAAGGAGGCGCGTTACGC 270 Query 226 AACGTCCCCGTCGGTGGTGGTTGCCGGAAAAGCAAG 261 ||||| || | |||||||||||| | |||| |||| Sbjct 271 AACGTTCCTATAGGTGGTGGTTGCAGAAAAAACAAG 306 >Solyc05g054510.1 Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLTU); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=897 Score = 99.0 bits (53), Expect = 6e-20 Identities = 118/150 (79%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 97 GCATTAAAGTGTCCTCGTTGCGATTCGCTC-AACACTAAATTCTGTTACTATAACAACTA 155 || ||||| ||||| ||||| || || | |||||||| || ||||||| ||||||||| Sbjct 241 GCCTTAAAATGTCCACGTTGTGAGTC-TACAAACACTAAGTTTTGTTACTTTAACAACTA 299 Query 156 TAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGG 215 || || ||||| || ||||| || ||||||| ||| |||||||||||||||| ||| || Sbjct 300 CAACCTTTCTCAACCTCGTCATTTTTGCAAGACTTGTCGGAGGTACTGGACTATAGGTGG 359 Query 216 CGTACTCCGTAACGTCCCCGTCGGTGGTGG 245 | | | ||||||||||| || ||||| Sbjct 360 CACTTTGAGGAACGTCCCCGTGGGAGGTGG 389 >Solyc00g024680.1 Dof zinc finger protein (AHRD V1 ***- Q9M4G1_SOLTU); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=414 Score = 99.0 bits (53), Expect = 6e-20 Identities = 126/162 (78%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 96 AGCATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTA 155 |||| | || ||||| | ||||| || |||||| || ||||| |||| |||||||| Sbjct 249 AGCACTGAAATGTCCAAGATGCGAATCCACCAACACCAAGTTCTGCTACTTCAACAACTA 308 Query 156 TAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGG 215 | ||| |||| ||||| ||||||||||||| |||||||| |||||||| ||||| Sbjct 309 CAGCCTCACTCAACCACGCCACTTCTGCAAGACCTGCCGGAGATACTGGACACGTGGCGG 368 Query 216 CGTACTCCGTAACGTCCCCGTCGGTGGTGGTTGCCGGA-AAA 256 | ||||| |||||||| ||||| ||||| ||||||| ||| Sbjct 369 AGCTCTCCGCAACGTCCCAGTCGGCGGTGGCTGCCGGAGAAA 410 >Solyc03g121400.1 Dof zinc finger protein14 SlDof14 Length=633 Score = 97.1 bits (52), Expect = 2e-19 Identities = 125/160 (78%), Gaps = 5/160 (3%) Strand=Plus/Plus Query 102 AAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTATAATCT 161 ||| || ||| | || ||||| | ||||| |||||||| ||||| ||||| ||||| || Sbjct 61 AAA-TGCCCTAGATGTGATTCACCAAACACAAAATTCTGCTACTACAACAATTATAACCT 119 Query 162 CTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTACT 221 ||||||||||| |||| ||||| || || | ||||| |||||||||||||| |||| Sbjct 120 TTCTCAGCCACGCCACTATTGCAAAAGCTGTAGAAGGTATTGGACTAAAGGCGG--TACT 177 Query 222 C--CGTAACGTCCCCGTCGGTGGTGGTTGCCGGAAAAGCA 259 | |||||| | || || ||||| |||| || ||||||| Sbjct 178 CTTCGTAACATACCTGTTGGTGGAGGTTCTCGTAAAAGCA 217 >Solyc11g010940.1 Dof zinc finger protein 6 (AHRD V1 *-*- A5HWF5_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=1128 Score = 95.3 bits (51), Expect = 8e-19 Identities = 138/180 (77%), Gaps = 5/180 (3%) Strand=Plus/Plus Query 84 CCAAAATCACCAAGCATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTA 143 |||||| | ||||| || || |||||| | || ||||| | ||| || || || || || Sbjct 82 CCAAAA-GAACAAGCTTTGAATTGTCCTAGATGTGATTCTCCCAATACCAAGTTTTGCTA 140 Query 144 CTATAACAACTATAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTG 203 |||||||| |||| ||| || || ||| | || || ||||||| |||| | |||||||| Sbjct 141 TTATAACAATTATAGTCTTTCACAACCAAGACATTTTTGCAAGACTTGCAGAAGGTACTG 200 Query 204 GACTAAAGGCGGCGTACTC--CGTAACGTCCCCGTCGGTGGTGGTTGCCGGAAAAGCAAG 261 ||||||||| || || || || ||||| || | |||||||||||| |||||| |||| Sbjct 201 GACTAAAGG-GG-GTGCTTTACGCAACGTTCCAATAGGTGGTGGTTGCAGGAAAAACAAG 258 >Solyc04g079570.1 Dof zinc finger protein (AHRD V1 *-*- Q0PY33_SOLLC); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=720 Score = 91.6 bits (49), Expect = 1e-17 Identities = 113/144 (78%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 105 GTGTCCTCGTTGCGATTCGCTC-AACACTAAATTCTGTTACTATAACAACTATAATCTCT 163 |||||| ||||| ||||| | ||||| || || ||||| || |||||||||||||| | Sbjct 87 GTGTCCACGTTGTGATTC-TACAAACACAAAGTTTTGTTATTACAACAACTATAATCTTT 145 Query 164 CTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTAC-TC 222 ||||||||||||| ||||||||| || || |||| ||||| |||||| | | Sbjct 146 CTCAGCCACGTCATTTCTGCAAGTCCTGTCGCCGGTATTGGACACGTGGCGGC-ACCTTA 204 Query 223 CGTAACGTCCCCGTCGGTGGTGGT 246 ||||||||||||||||| || ||| Sbjct 205 CGTAACGTCCCCGTCGGCGGCGGT 228 >Solyc02g065290.1 Dof zinc finger protein2 SlDof2 Length=612 Score = 84.2 bits (45), Expect = 2e-15 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 125 TCAACACTAAATTCTGTTACTATAACAACTATAATCTCTCTCAGCCACGTCACTTCTGCA 184 ||||||| || ||||||||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct 113 TCAACACAAAGTTCTGTTACTACAACAACTACAATTTGTCTCAGCCACGCCATTTCTGCA 172 Query 185 AGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTACTCCGTAACGTCCCCGTCGGTGGTG 244 || |||||| | |||||||| |||| ||| | ||| || |||| | ||||| | Sbjct 173 AGTCTTGCCGCCGTTACTGGACCCAAGGGGGCACTTTACGTGACATCCCTATTGGTGGAG 232 Query 245 GTTGCCGGAAAA 256 || |||| |||| Sbjct 233 GTAGCCGCAAAA 244 >Solyc04g070960.1 Dof zinc finger protein 9 (AHRD V1 *-*- A5HWF8_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=804 Score = 82.4 bits (44), Expect = 6e-15 Identities = 115/148 (78%), Gaps = 10/148 (7%) Strand=Plus/Plus Query 126 CAACACTAAATTCTGTTACTATAACAACTATAATCTCTCTCAGCC-ACGTCACTTCTGCA 184 |||||| ||||| |||||||| |||||||||| | || || || | || | || |||| Sbjct 96 CAACACAAAATTTTGTTACTACAACAACTATAGCTTGTCACAACCTAGGT-ATTTTTGCA 154 Query 185 AGAG-TTGCCGGAGGTACTGGACTAAAGGCGGCGTACTC--CGTAACGTCCCCGTCGGTG 241 | || ||| || || || ||||||||||| | || ||| || || |||||||| |||| Sbjct 155 A-AGCTTGTCGTAGATATTGGACTAAAGG-TG-GTTCTCTTCGAAATGTCCCCGTTGGTG 211 Query 242 GTGGTTGCCGGAAAAG-CAAGCGTTCAA 268 | |||||||||||||| | | ||||||| Sbjct 212 GCGGTTGCCGGAAAAGTCGA-CGTTCAA 238 >Solyc02g090220.2 Dof zinc finger protein (AHRD V1 *-*- Q9SXG5_ORYSA); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=904 Score = 82.4 bits (44), Expect = 6e-15 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 106 TGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTATAATCTCTCT 165 || || ||||| ||||| |||||| |||||||||||||||||||| || ||| ||||| Sbjct 170 TGCCCACGTTGTGATTCCACCAACACAAAATTCTGTTACTATAACAATTACAATTTCTCT 229 Query 166 CAGCCACGTCACTTCTGCAA 185 |||||||| || |||||||| Sbjct 230 CAGCCACGCCATTTCTGCAA 249 >Solyc10g086440.1 Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLTU); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=1089 Score = 78.7 bits (42), Expect = 8e-14 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 102 AAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTATAATCT 161 ||| ||||||||||| || || ||||| || || || |||| ||||||||| | || Sbjct 261 AAAATGTCCTCGTTGTGAGTCAACAAACACAAAGTTTTGCTACTTTAACAACTACAGCCT 320 Query 162 CTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCGTACT 221 ||| || || ||||| |||||||||| |||| | ||||| ||||| | ||| |||| || Sbjct 321 CTCCCAACCTCGTCATTTCTGCAAGACTTGCAGAAGGTATTGGACGAGAGGGGGCGCTCT 380 Query 222 CCGTAACGTCCCCGTCGGTGG 242 | | ||||||||| ||||| Sbjct 381 AAGGAGCGTCCCCGTGGGTGG 401 >Solyc02g077950.1 Dof zinc finger protein5 SlDof5 Length=1140 Score = 76.8 bits (41), Expect = 3e-13 Identities = 80/98 (82%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 91 CACCA-AGCATTAAAGTGTCCTCGTTGCGATTCG-CTCAACACTAAATTCTGTTACTATA 148 ||||| | | ||||| |||||||||||||||||| || || || || || |||||||| | Sbjct 89 CACCACATC-TTAAA-TGTCCTCGTTGCGATTCGTCT-AATACAAAGTTTTGTTACTACA 145 Query 149 ACAACTATAATCTCTCTCAGCCACGTCACTTCTGCAAG 186 |||| |||| | | ||||||||| | ||||| |||||| Sbjct 146 ACAATTATAGTTTGTCTCAGCCAAGGCACTTTTGCAAG 183 >Solyc06g062520.1 Dof zinc finger protein 4 (AHRD V1 *-*- A5HWF3_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=579 Score = 75.0 bits (40), Expect = 1e-12 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 89 ATCACCAAG-CATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTAT 147 |||| |||| | | ||| || ||| | || ||||| ||||||| || || |||||||| Sbjct 50 ATCAACAAGTCCTGAAA-TGCCCTAGATGTGATTCAATCAACACGAAGTTTTGTTACTAC 108 Query 148 AACAACTATAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACT 207 ||||| || ||||| ||||||||||| || || || |||| ||| ||||| |||||| Sbjct 109 AACAATTACAATCTTTCTCAGCCACGCCATTTTTGTAAGAATTGTAAAAGGTATTGGACT 168 Query 208 AAAGG 212 ||||| Sbjct 169 AAAGG 173 >Solyc11g072500.1 Dof zinc finger protein 12 (AHRD V1 *-*- A5HWG1_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=858 Score = 73.1 bits (39), Expect = 4e-12 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126 CAACACTAAATTCTGTTACTATAACAACTATAATCTCTCTCAGCCACGTCACTTCTGCAA 185 |||||| ||||||||||||||||||||||| | || |||| || || |||||||||| Sbjct 150 CAACACGAAATTCTGTTACTATAACAACTACAGCCTGACTCAACCGCGATACTTCTGCAA 209 Query 186 GAGT-TGCCGGAGGTACTGGACTAAAGG 212 | ||| | ||||||||||||||||| Sbjct 210 -ATCCTGCAGAAGGTACTGGACTAAAGG 236 >Solyc02g077960.1 Dof zinc finger protein 12 (AHRD V1 *-*- A5HWG1_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=900 Score = 73.1 bits (39), Expect = 4e-12 Identities = 131/176 (74%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 81 CCACCAAAATCACCA-AGCATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCT 139 ||| || || ||||| ||| ||| || |||||||| ||||| ||| || || || | Sbjct 94 CCAGCACAACCACCACCGCA-GAAA-TGCCCTCGTTGTGATTCAAACAATACCAAGTTTT 151 Query 140 GTTACTATAACAACTATAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGT 199 | ||||| || || || | | | ||||||| || | |||||||||| || |||||| Sbjct 152 GCTACTACAATAATTACAGTTTGACTCAGCCTCGCTATTTCTGCAAGACGTGTAGGAGGT 211 Query 200 ACTGGACTAAAGGCGGCGTACTCCGTAACGTCCCCGTCGGTGGTGGTTGCCGGAAA 255 |||||||| |||| || || | |||||||||||||| ||||||||||| ||| Sbjct 212 ACTGGACTCAAGGTGGAACCCTAAGGAACGTCCCCGTCGGCGGTGGTTGCCGTAAA 267 >Solyc09g010680.2 Dof zinc finger protein (AHRD V1 *-*- Q9M4G1_SOLTU); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=1402 Score = 71.3 bits (38), Expect = 1e-11 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 96 AGCATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTA 155 ||| ||||| || ||| | || ||||| |||||||| || ||||||| |||||||| Sbjct 249 AGCCTTAAAATGCCCTAGATGTGATTCAACAAACACTAAGTTTTGTTACTTCAACAACTA 308 Query 156 TAATCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGG 215 || |||||| ||||| | ||||| |||||| ||| ||||||||||||| ||| || Sbjct 309 TAGTCTCTCACAGCCTAGACACTTTTGCAAGGCTTGTAAAAGGTACTGGACTAGAGGTGG 368 Query 216 CG 217 || Sbjct 369 CG 370 >Solyc06g076030.2 Dof zinc finger protein (AHRD V1 ***- Q9M4G1_SOLTU); contains Interpro domain(s) IPR003851 Zinc finger, Dof-type Length=1504 Score = 71.3 bits (38), Expect = 1e-11 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 99 ATTAAAGTGTCCTCGTTGCGATTCGCTCAACACTAAATTCTGTTACTATAACAACTATAA 158 |||||||||||| | || ||||| ||||| || ||||| |||| |||||||| || Sbjct 411 ATTAAAGTGTCCAAGGTGTGATTCAACAAACACAAAGTTCTGCTACTTCAACAACTACAA 470 Query 159 TCTCTCTCAGCCACGTCACTTCTGCAAGAGTTGCCGGAGGTACTGGACTAAAGGCGGCG 217 || || || ||| | ||||||||||||| || || |||||||||||| ||| |||| Sbjct 471 CCTTTCCCAACCAAGACACTTCTGCAAGACGTGTCGCCGGTACTGGACTAGAGGGGGCG 529 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36837644928 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5