BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Solyc06g068460.2.1 Length=1646 Score E Sequences producing significant alignments: (Bits) Value Solyc06g068460.2WRKY transcription factor 40 SlWRKY40 3040 0.0 Solyc03g116890.2WRKY transcription factor 39 SlWRKY39 228 1e-58 Solyc12g042590.1WRKY transcription factor 43 SlWRKY43 161 1e-38 Solyc08g067360.2WRKY transcription factor 45 SlWRKY45 132 1e-29 Solyc08g067340.2WRKY transcription factor 46 SlWRKY46 126 5e-28 Solyc03g113120.2WRKY transcription factor 73 SlWRKY73 91.6 2e-17 >Solyc06g068460.2 WRKY transcription factor 40 SlWRKY40 Length=1646 Score = 3040 bits (1646), Expect = 0.0 Identities = 1646/1646 (100%), Gaps = 0/1646 (0%) Strand=Plus/Plus Query 1 CTAATACCATCATCAGATTTTGAGGAGATAAAAAGAAAGTGTTTGTTTCTTTAACTTAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTAATACCATCATCAGATTTTGAGGAGATAAAAAGAAAGTGTTTGTTTCTTTAACTTAAA 60 Query 61 CACACCTGAAGAAAGACTACAACTTTGTTGATTCTTGGAATTTTCATACATCAAAGAAGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CACACCTGAAGAAAGACTACAACTTTGTTGATTCTTGGAATTTTCATACATCAAAGAAGA 120 Query 121 TATTAATTACAATGGAATTTACCAGTTTGGTTGATACTTCATTGGATTTGAGCTTTAGGC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATTAATTACAATGGAATTTACCAGTTTGGTTGATACTTCATTGGATTTGAGCTTTAGGC 180 Query 181 CTCGTCAAAAAGTCCTGAAACAAGAAGTGCAGAGTGATTTCACTGGATTGAGCATAGAAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTCGTCAAAAAGTCCTGAAACAAGAAGTGCAGAGTGATTTCACTGGATTGAGCATAGAAA 240 Query 241 GAGAGAATATGGTGGTGAAAAATGAGGCAGGGGATTTGTTAGAGGAACTAAACAGAGTGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GAGAGAATATGGTGGTGAAAAATGAGGCAGGGGATTTGTTAGAGGAACTAAACAGAGTGA 300 Query 301 GTAGTGAAAACAAGAAGTTAACAGAGATGCTTACTGTAGTTTGTGAAAATTACAATGCTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GTAGTGAAAACAAGAAGTTAACAGAGATGCTTACTGTAGTTTGTGAAAATTACAATGCTT 360 Query 361 TAAGAAACCAAATGATGGAGTATATGAGCACACAAAATGGTGTAGCTGAAGATACTAGTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TAAGAAACCAAATGATGGAGTATATGAGCACACAAAATGGTGTAGCTGAAGATACTAGTG 420 Query 421 CAGGGTCAAGGAAAAGAAAAGCTGAAAGTATCTCTAATCCTGTTAACAACAACAACAATA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CAGGGTCAAGGAAAAGAAAAGCTGAAAGTATCTCTAATCCTGTTAACAACAACAACAATA 480 Query 481 ATAATAACAATATGGATGTTGTTCATGGACGTTCATCAGAAAGCAGTTCGAGTGACGAAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATAATAACAATATGGATGTTGTTCATGGACGTTCATCAGAAAGCAGTTCGAGTGACGAAG 540 Query 541 AGTCCTGTTGCAAGAAACTCAGAGAGGAGCACATAAAAGCGAAAGTTACAATTGTTTCTA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGTCCTGTTGCAAGAAACTCAGAGAGGAGCACATAAAAGCGAAAGTTACAATTGTTTCTA 600 Query 601 TGAAGACTGATGCATCTGATACCTCTCTTATTGTAAAGGATGGTTATCAGTGGAGAAAGT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TGAAGACTGATGCATCTGATACCTCTCTTATTGTAAAGGATGGTTATCAGTGGAGAAAGT 660 Query 661 ATGGTCAGAAAGTAACTAGAGACAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATTTG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 ATGGTCAGAAAGTAACTAGAGACAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATTTG 720 Query 721 CACCTGGTTGCCCTGTCAAGAAAAAGGTTCAGAGAAGCATTGAAGATCAGTCTATTGTGG 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CACCTGGTTGCCCTGTCAAGAAAAAGGTTCAGAGAAGCATTGAAGATCAGTCTATTGTGG 780 Query 781 TAGCAACATATGAAGGAGAACATAACCATCCACAAACCTCAAAACCAGAATCAGGTCCAA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 TAGCAACATATGAAGGAGAACATAACCATCCACAAACCTCAAAACCAGAATCAGGTCCAA 840 Query 841 GTACTAATACTTCCACAGCCAGCCGATTAAATGTGACAACTATCGCGGGCACTACTACTT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 GTACTAATACTTCCACAGCCAGCCGATTAAATGTGACAACTATCGCGGGCACTACTACTT 900 Query 901 CAGTCCCTTGCTCTACCACTCTCAATTCCTCAGGACCAACCATTACTCTCGATCTTACTG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CAGTCCCTTGCTCTACCACTCTCAATTCCTCAGGACCAACCATTACTCTCGATCTTACTG 960 Query 961 CACCGAAAACAGTGGAAAAGCGCGATATGAAGATGAATCACAGTACTACTAGTCCTACCA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 CACCGAAAACAGTGGAAAAGCGCGATATGAAGATGAATCACAGTACTACTAGTCCTACCA 1020 Query 1021 GTGGCAATAGCATTAGAACAACAACAACAACATCAGCAGCAGGAGGTGAATATCAAAATA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GTGGCAATAGCATTAGAACAACAACAACAACATCAGCAGCAGGAGGTGAATATCAAAATA 1080 Query 1081 GGCCAGAGTTTCAACAGTTCTTGATAGAACAAATGGCTACTTCCTTGACCAAAGATCCAA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 GGCCAGAGTTTCAACAGTTCTTGATAGAACAAATGGCTACTTCCTTGACCAAAGATCCAA 1140 Query 1141 GTTTCAAAGCAGCACTTGCTGCCGCCATATCAGGAAAAATCCTCCAACATAATAATCAGA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GTTTCAAAGCAGCACTTGCTGCCGCCATATCAGGAAAAATCCTCCAACATAATAATCAGA 1200 Query 1201 CAGGGAGATGGTAAACAAAAGTCCAGCAGAGCAGTCAACTACTTTGTATAGACAATTGTT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 CAGGGAGATGGTAAACAAAAGTCCAGCAGAGCAGTCAACTACTTTGTATAGACAATTGTT 1260 Query 1261 CAATATTTTCCAACTTGACTCATATCAAAAGTTCTTAGGAGGAAAAAGGAAACACAAATT 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 CAATATTTTCCAACTTGACTCATATCAAAAGTTCTTAGGAGGAAAAAGGAAACACAAATT 1320 Query 1321 ATTGTTCAAATGTAAATACAGGAAAAGTTAGTAACATTTGGACCGCAAAGTTGGACTCGG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 ATTGTTCAAATGTAAATACAGGAAAAGTTAGTAACATTTGGACCGCAAAGTTGGACTCGG 1380 Query 1381 AGATGCACGTGAGAATGGGATCTTACTAGACTCTTAAGAAATTTTCAACAGCAGCCATAC 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 AGATGCACGTGAGAATGGGATCTTACTAGACTCTTAAGAAATTTTCAACAGCAGCCATAC 1440 Query 1441 TGGGTCCCCTGCAGAATGGACTTGCTCTGAGTTGGCTAGATTGAGACTGAATTGTCCTAG 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 TGGGTCCCCTGCAGAATGGACTTGCTCTGAGTTGGCTAGATTGAGACTGAATTGTCCTAG 1500 Query 1501 AAGCATTTAAGTTGTTGAATTTGACAACTTTGTAGAATACTGAGATGAGATTATGAAATA 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1501 AAGCATTTAAGTTGTTGAATTTGACAACTTTGTAGAATACTGAGATGAGATTATGAAATA 1560 Query 1561 TACAACTTACTGTTCTGTTCACTGACTTTATACAACTCTTTTGTGGCATCAAATTTAAGT 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 TACAACTTACTGTTCTGTTCACTGACTTTATACAACTCTTTTGTGGCATCAAATTTAAGT 1620 Query 1621 TACATGCAAGAATCAAAAAAATTCTA 1646 |||||||||||||||||||||||||| Sbjct 1621 TACATGCAAGAATCAAAAAAATTCTA 1646 >Solyc03g116890.2 WRKY transcription factor 39 SlWRKY39 Length=1434 Score = 228 bits (123), Expect = 1e-58 Identities = 427/571 (75%), Gaps = 31/571 (5%) Strand=Plus/Plus Query 258 AAAA-ATGAGGCAGGGGATTTGTTAGAGGAACTAAACAGAGTGAGTAGTGAAAACAAGAA 316 |||| |||||||| | |||| ||||||||||||| ||||| | | |||||| ||||| Sbjct 216 AAAAGATGAGGCAAGTAATTTAATAGAGGAACTAAATAGAGTAAATGCTGAAAATAAGAA 275 Query 317 GTTAACAGAGATGCTTACTGTAGTT-TGTG--AAAATTACAATGCTTTAAGAAACCAAAT 373 || || |||||| | || |||| |||| | ||||||||| | || || |||||| | Sbjct 276 ATTGACGGAGATGTTAAC---AGTTATGTGCCAGAATTACAATTCATTGAGGAACCAATT 332 Query 374 GATGGAGTATATGAGCACACAAAATGGT-GTAGCT-GAAGATACTAGTGCAGGGTCAAGG 431 || ||| |||||||||| || ||| || ||| || | || || | |||| || | | Sbjct 333 GACGGAATATATGAGCAAGCAGAATAGTAGTA-CTAGTGGA-GCTGAT-CAGGATC-A-G 387 Query 432 AAAAG-AAAAGCTGAAAGTATCTCTAATCCTGTTAACAACAACAACAATAATAATAACAA 490 || || | | | ||| | | ||| || ||||||||||| ||||||||||| || Sbjct 388 AACAGCGATGGATCGAAGAAAAT-TAAAATTGAAAACAACAACAATAATAATAATAATAA 446 Query 491 T---A-TG-G--AT-GT-TGTTCATGGACGTT-CA-TCAGAAAGCAGTTCGAGTGACGAA 539 | | || | || || ||||| | ||| | ||||| ||||| || ||||| ||| Sbjct 447 TGAAATTGTGAAATCGTCAGTTCA-AG-TGTTGAATTCAGAGAGCAGCTCAAGTGATGAA 504 Query 540 GAGTCCTGTTGCAAGAAACTCAGAGAGGAGCACATAAAAGCGAA-AGTTACAATTGTTTC 598 || || | | ||||||| ||||| || ||||| ||| | || | || ||| |||| Sbjct 505 GATTCATCTACAAAGAAACCAAGAGAAGAACACATTAAAACTAAGACTT-CAAGAGTTTA 563 Query 599 TATGAAGACTGATGCATCTGATACCTCTCTTATTGTAAAGGATGGTTATCAGTGGAGAAA 658 ||||| ||||| |||||||||| |||||||| || || ||||| || |||||||| || Sbjct 564 TATGAGAACTGAACCATCTGATACTTCTCTTATAGTGAAAGATGGATACCAGTGGAGGAA 623 Query 659 GTATGGTCAGAAAGTAACTAGAGACAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATT 718 ||||| ||||||||||| |||||||| || | |||||||||||| |||| |||||| || Sbjct 624 ATATGGACAGAAAGTAACAAGAGACAATCCATCTCCAAGAGCTTATTTCAAATGCTCTTT 683 Query 719 TGCACCTGGTTGCCCTGTCAAGAAAAAGGTTCAGAGAAGCATTGAAGATCAGTCTATTGT 778 ||| ||| || || || |||||||||||||| |||||| | ||||| || || ||| | Sbjct 684 TGCTCCTACCTGTCCCGTTAAGAAAAAGGTTCAAAGAAGCGTGGAAGACCAATCGATTCT 743 Query 779 GGTAGCAACATATGAAGGAGAACATAACCAT 809 |||||||| |||||||||||||| |||||| Sbjct 744 AGTAGCAACCTATGAAGGAGAACACAACCAT 774 Score = 141 bits (76), Expect = 2e-32 Identities = 107/122 (88%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 1074 CAAAATAGGCCAGAGTTTCAACAGTTCTTGATAGAACAAATGGCTACTTCCTTGACCAAA 1133 |||||||| |||||||||||||| ||||||||||||||||||||| | || ||||| ||| Sbjct 1000 CAAAATAGACCAGAGTTTCAACATTTCTTGATAGAACAAATGGCTTCATCATTGACTAAA 1059 Query 1134 GATCCAAGTTTCAAAGCAGCACTT-GCTGCCGCCATATCAGGAAAAATCCTCCAACATAA 1192 ||||||||||| ||||||| ||| || |||||||||||||||||| || | ||| |||| Sbjct 1060 GATCCAAGTTTTCAAGCAGC-CTTAGCAGCCGCCATATCAGGAAAATTCTTGCAAAATAA 1118 Query 1193 TA 1194 || Sbjct 1119 TA 1120 >Solyc12g042590.1 WRKY transcription factor 43 SlWRKY43 Length=651 Score = 161 bits (87), Expect = 1e-38 Identities = 159/194 (82%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 623 CTCTCTTATTGTAAAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACTAGAGA 682 ||||| || || |||||||| ||| ||||| | || || ||||| |||||||| ||| | Sbjct 287 CTCTCCTA--GTGAAGGATGGATATGAGTGGCGTAAATACGGTCAAAAAGTAACAAGAAA 344 Query 683 CAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAGAA 742 |||||| | ||| ||||| ||||||| || |||||||| ||| |||||| || ||||| Sbjct 345 CAACCCGTATCCTAGAGCGTACTTCAAGTGTTCATTTGCTCCTACTTGCCCCGTTAAGAA 404 Query 743 AAAGGTTCAGAGAAGCATTGAAGATCAGTCTATTGTGGTAGCAACATATGAAGGAGAACA 802 |||||| || ||||||||||| ||| ||||||| | |||||||||||||||||||||| Sbjct 405 AAAGGTGCAAAGAAGCATTGATGATATGTCTATTATAATAGCAACATATGAAGGAGAACA 464 Query 803 TAACCATCCACAAA 816 ||||||| || ||| Sbjct 465 TAACCATTCA-AAA 477 >Solyc08g067360.2 WRKY transcription factor 45 SlWRKY45 Length=904 Score = 132 bits (71), Expect = 1e-29 Identities = 144/180 (80%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 633 GTAAAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACTAGAGACAACCCTTGT 692 || |||||||| ||| | |||||||| |||||||| ||||| || ||||| ||||||| | Sbjct 385 GTGAAGGATGGATATAACTGGAGAAAATATGGTCAAAAAGTTACAAGAGATAACCCTTAT 444 Query 693 CCAAGAGCTTACT-TCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAGAAAAAGGTTCA 751 || ||||| || | | || || ||||||||||| ||||| |||||||| ||||| || Sbjct 445 CCTAGAGCATATTATAAG-TGTTCATTTGCACCAACATGCCCAGTCAAGAAGAAGGTACA 503 Query 752 GAGAAGCATTGAAGATCAGTCTATTGTGGTAGCAACATATGAAGGAGAACATAACCATCC 811 |||||||||||||||| || ||| | |||| ||||||||| ||||| |||||||| Sbjct 504 AAGAAGCATTGAAGATCCATCAATTTTAGTAGGTGTATATGAAGGGGAACACAACCATCC 563 >Solyc08g067340.2 WRKY transcription factor 46 SlWRKY46 Length=1200 Score = 126 bits (68), Expect = 5e-28 Identities = 151/191 (79%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 635 AAAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACTAGAGACAACCCTTGTCC 694 ||| ||||| ||| | |||||||| |||||||| ||||| || ||||| || |||| ||| Sbjct 471 AAA-GATGGATATAATTGGAGAAAATATGGTCAAAAAGTGACAAGAGATAATCCTTCTCC 529 Query 695 AAGAGCTTACTTCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAGAAAAAGGTTCAGAG 754 |||||| || || | || ||||||||||| || || |||||||||||||| || || Sbjct 530 AAGAGCCTATTTTAAGTGTTCATTTGCACCATCATGTCCAGTCAAGAAAAAGGTACAAAG 589 Query 755 AAGCATTGAAGAT-CAGTCTATTGTGGTAGCAACATATGAAGGAGAACATAACCATCCAC 813 ||| || ||||| || || ||| | ||||| ||||||||||| ||||| || ||||| | Sbjct 590 AAGTGTTAAAGATGCA-TCAATTTTAGTAGCTACATATGAAGGGGAACACAATCATCCCC 648 Query 814 AA--ACCTCAA 822 || ||||||| Sbjct 649 AACCACCTCAA 659 >Solyc03g113120.2 WRKY transcription factor 73 SlWRKY73 Length=1596 Score = 91.6 bits (49), Expect = 2e-17 Identities = 137/180 (76%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 636 AAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACTAGAGACAACCCTTGTCCA 695 || ||||| | ||| |||||||| ||||| || ||| | | | || ||||| ||||| Sbjct 727 AACGATGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGGAACCCATGTCCT 786 Query 696 AGAGCTTACTTCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAGAAAA-AGGTTCAGAG 754 |||||||||| | | ||| | | ||||| |||||| || ||||||| |||| || || Sbjct 787 AGAGCTTACTACCGTTGCACGGTAGCACCAAATTGCCCCGT-AAGAAAACAGGTACAAAG 845 Query 755 AAGCATTGAAGATCA-GTCTATTGTGGTAGCAACATATGAAGGAGAACATAACCATCCAC 813 | ||||| |||| || |||||| || | ||||||| |||||| |||||||||||||| Sbjct 846 ATGCATTCAAGA-CATGTCTATATTGATCACAACATACGAAGGAACACATAACCATCCAC 904 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66547523160 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5