BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 4.0) 34,075 sequences; 44,419,890 total letters Query= Untitled_sequence Length=1397 Score E Sequences producing significant alignments: (Bits) Value Solyc10g081510.2.1 1744 0.0 Solyc01g009180.4.1 857 0.0 >Solyc10g081510.2.1 Length=2797 Score = 1744 bits (944), Expect = 0.0 Identities = 1247/1398 (89%), Gaps = 2/1398 (0%) Strand=Plus/Plus Query 1 ATGCTCGGTGCCGTCCCATCTAGATACAACTGGACCGGTGGTGAGATCGGATTCGACACT 60 ||||| ||||| ||||||||||| ||||||||||||||||||||||| | |||| ||| Sbjct 418 ATGCTTGGTGCTGTCCCATCTAGGTACAACTGGACCGGTGGTGAGATTGAGTTCGCTACT 477 Query 61 TACTTCTCCATGGCCAGAGGAAATGCCTCTGTCCCTGCTATGGAGATGACCAAGTTGTTT 120 |||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| Sbjct 478 TACTTCTCCATGGCCAGAGGAAATGCTTCCGTCCCTGCTATGGAGATGACCAAGTGGTTC 537 Query 121 GATACCAACTACCACTTCATTGTCCCTGAATTAGGACCAGATGTTAACTTCTCTTATGCT 180 || ||||||||||||||||| |||||||| || ||||| ||||||||||| || |||||| Sbjct 538 GACACCAACTACCACTTCATCGTCCCTGAGTTGGGACCTGATGTTAACTTTTCATATGCT 597 Query 181 TCTCACAAGGCAGTGGACGAGTACAAAGAGGCTAAGGGGCTTGGTGTAAATACTGTCCCG 240 || ||||||||||| | |||||||||||||| |||| || || ||| | ||||| || Sbjct 598 TCCCACAAGGCAGTAAATGAGTACAAAGAGGCCAAGGCGCAAGGAGTAGACACTGTTCCA 657 Query 241 GTACTTATTGGTCCAGTCTCATACCTGTTACTATCTAAACCTGCTAAGGGTGTTGAGAAA 300 || ||| |||||||||| |||||| |||| ||||| || ||||||||||||||||| ||| Sbjct 658 GTTCTTGTTGGTCCAGTTTCATACTTGTTGCTATCCAAGCCTGCTAAGGGTGTTGACAAA 717 Query 301 TCTTTCCCCCTTTTATCACTTCTTGACAAAATACTTCCAATCTACAAGGAAGTCATTTCC 360 |||||||| ||||| |||||||| |||||||| |||||||| ||||||||||| || | Sbjct 718 TCTTTCCCACTTTTGTCACTTCTGGACAAAATCCTTCCAATTTACAAGGAAGTTATCGCT 777 Query 361 GAGTTGAAGGCTGCTGGTGCTTCCTGGATTCAGTTTGATGAGCCTACCCTTGTGTTGGAT 420 ||||||||||| ||||||||||| ||||| ||||| |||||||| || |||||||||||| Sbjct 778 GAGTTGAAGGCAGCTGGTGCTTCTTGGATCCAGTTAGATGAGCCCACACTTGTGTTGGAT 837 Query 421 CTTGAGGCTCACCAATTGGAAGCATTCACCAAGGCATATGCTGAACTGGAATCAACTCTA 480 || ||| ||||| |||||||||||||||||||||| |||||||| || || ||| ||||| Sbjct 838 CTAGAGTCTCACAAATTGGAAGCATTCACCAAGGCCTATGCTGATCTCGAGTCATCTCTA 897 Query 481 TCTGGCGTTGATGTTCTCATTGAAACCTATTTTGCTGATGTTCCTGCCGGCGCATTCAAA 540 |||||| || |||||||| |||| ||||| |||||||||||||| |||| ||||||||| Sbjct 898 TCTGGCCTTAATGTTCTCGTTGAGACCTACTTTGCTGATGTTCCCGCCGAGGCATTCAAA 957 Query 541 ACCCTTACTGCTTTGAAGGGAGTTACTGCCTTTGGTTTTGACTTGGTTCGTGGAACTCAG 600 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 958 ACCCTCACTGCTTTGAAGGGAGTTACTGCCTTTGGCTTTGACTTGGTCCGTGGAACTCAG 1017 Query 601 ACCCTTGATTTGATCAAGGGTGGCTTCCCCTCAGGAAAGTACTTGTTTGCAGGAGTGGTT 660 |||||||| || |||||| || ||||||| ||||| |||||||||||||||||||||||| Sbjct 1018 ACCCTTGAGTTAATCAAGAGTAGCTTCCCTTCAGGCAAGTACTTGTTTGCAGGAGTGGTT 1077 Query 661 GATGGGAGGAACATCTGGGCTAATGATCTTGCTGCATCTCTTGAGCTCTTGAAATCACTT 720 || || |||||||||||||| |||||||||||||||||||||| ||| || || | ||| Sbjct 1078 GACGGAAGGAACATCTGGGCAAATGATCTTGCTGCATCTCTTGCTCTCCTGCAAACTCTT 1137 Query 721 GAGGGCATTGTAGGAAAAGATAAGCTTGTTGTCTCTACATCTTGCTCATTGCTCCACACT 780 ||||| ||||||||||||| |||||||||| ||||||||||||||| | ||||||||| Sbjct 1138 GAGGGAGTTGTAGGAAAAGACAAGCTTGTTGCCTCTACATCTTGCTCCCTACTCCACACT 1197 Query 781 GCTGTTGATCTCATCAACGAGACCAAGCTAGATGATGAAATCAAATCATGGTTGGCATTT 840 ||||||||||| ||||||||||| || || || ||||||||||| ||||||||||||||| Sbjct 1198 GCTGTTGATCTGATCAACGAGACAAAACTTGACGATGAAATCAAGTCATGGTTGGCATTT 1257 Query 841 GCTGCTCAAAAAGTTGTTGAAGTGAATGCTCTTGCCAAGGCATTGGCTGGTGACAAGGAT 900 ||||| || || |||||||||||||||||| | |||||||||||| |||||| ||||||| Sbjct 1258 GCTGCCCAGAAGGTTGTTGAAGTGAATGCTTTGGCCAAGGCATTGTCTGGTGCCAAGGAT 1317 Query 901 GAGGCATTCTTCTCCGCTAGCGCTGCTGCTCAAGCTTCCAGAAAGACCTCCCCAAGAGTG 960 |||||||| ||||| |||| |||||||||||||||||||| ||| |||||||||||||| Sbjct 1318 GAGGCATTTTTCTCTGCTAATGCTGCTGCTCAAGCTTCCAGGAAGTCCTCCCCAAGAGTG 1377 Query 961 ACAAATGAAGCTGTTCAAAAGGCTGCTGCTGCTCT-CAGAGGTTCTGACCACCGCCGTGC 1019 || ||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||| Sbjct 1378 ACCAATGAAGCTGTTCAAAAGGCTTCTGCTGCTCTTCA-AGGATCTGACCACCGCCGTGC 1436 Query 1020 AACAAATGTTAGTGCTAGGCTTGATGCCCAACAAAAGAAACTTAACCTCCCGGTTCTCCC 1079 ||||||||||||||||| |||||||||||||||||||| |||||||| || | || || Sbjct 1437 TACAAATGTTAGTGCTAGACTTGATGCCCAACAAAAGAAGCTTAACCTACCAATCCTGCC 1496 Query 1080 GACAACCACCATTGGGTCCTTCCCTCAGACAGTGGAGCTCAGAAGAGTTCGTCGTGAATA 1139 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1497 CACAACCACCATTGGATCCTTCCCCCAGACAGTGGAGCTCAGGAGAGTTCGTCGTGAATA 1556 Query 1140 CAAGGCCAAGAAGATCTCTGAGGAGGAGTATGTTAAAGCCATCAAGGAGGAAATCAAGAA 1199 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 1557 CAAGGCCAAGAAGATCTCTGAGGAGGAGTATGTTAAGGCCATCACCGAGGAAATCAAGAA 1616 Query 1200 GGTTGTTGACCTCCAGGAAGAGCTTGACATTGATGTCTTGGTTCATGGAGAGCCCGAGAG 1259 ||||||||| |||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct 1617 GGTTGTTGATCTCCAGGAGGAACTTGACATTGATGTCTTGGTTCACGGAGAGCCTGAGAG 1676 Query 1260 GAACGATATGGTTGAATACTTTGGGGAACAACTTTCTGGTTTTGCATTCACTGCTAATGG 1319 ||||||||||||||| ||||| || || || || ||||||||||| |||||||| ||||| Sbjct 1677 GAACGATATGGTTGAGTACTTCGGAGAGCAGCTCTCTGGTTTTGCTTTCACTGCCAATGG 1736 Query 1320 ATGGGTTCAATCTTATGGATCTCGATGTGTGAAGCCACCAATCATCTATGGTGATGTCAG 1379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1737 ATGGGTTCAATCTTATGGATCTCGATGTGTGAAGCCACCAATCATCTATGGTGATGTGAG 1796 Query 1380 TCGCCCAAAGCCAATGAC 1397 ||||| ||||||||||| Sbjct 1797 CCGCCCTAAGCCAATGAC 1814 >Solyc01g009180.4.1 Length=2636 Score = 857 bits (464), Expect = 0.0 Identities = 1088/1399 (78%), Gaps = 4/1399 (0%) Strand=Plus/Plus Query 1 ATGCTCGGTGCCGTCCCATCTAGATACAACTGGACCGGTGGTGAGATCGGATTCGACACT 60 ||||| ||||| || ||| | |||||| |||| ||||||||||| || || || Sbjct 408 ATGCTAGGTGCAGTTCCACCAAGATACGGTTGGAATGGTGGTGAGATTGGTTTTGATGTC 467 Query 61 TACTTCTCCATGGCCAGAGGAAATGCCTCTGTCCCTGCTATGGAGATGACCAAGTTGTTT 120 |||||| | ||||| || ||||| |||||||| ||||| ||||| ||||| || | |||| Sbjct 468 TACTTCCCAATGGCTAGGGGAAACGCCTCTGTACCTGCCATGGAAATGACAAAATGGTTT 527 Query 121 GATACCAACTACCACTTCATTGTCCCTGAATTAGGACCAGATGTTAACTTCTCTTATGCT 180 || ||||||||||||| ||||| ||||||||||| ||||||||||| || || ||||| Sbjct 528 GACACCAACTACCACTATATTGTTCCTGAATTAGGTCCAGATGTTAAGTTTTCCTATGCG 587 Query 181 TCTCACAAGGCAGTGGACGAGTACAAAGAGGCTAAGGGGCTTGGTGTAAATACTGTCCCG 240 |||||||||||||| || || || || ||||| || || | | || ||||| Sbjct 588 TCTCACAAGGCAGTTAGTGAATATAAGGAAGCTAAATCTCTCGGCATTGACACAGTCCCT 647 Query 241 GTACTTATTGGTCCAGTCTCATACCTGTTACTATCTAAACCTGCTAAGGGTGTTGAGAAA 300 || || | |||||||| || | ||| || |||| ||| | || || |||||||| || Sbjct 648 GTCCTCGTAGGTCCAGTTTCCTTCCTCTTGTTATCAAAAGCAGCAAAAGGTGTTGAAAAG 707 Query 301 TCTTTCCCCCTTTTATCACTTCTTGACAAAATACTTCCAATCTACAAGGAAGTCATTTCC 360 || || || ||| ||||||| |||| || || |||||| | ||||||||||||||| | Sbjct 708 TCGTTTCCTCTTCTATCACTGATTGAAAAGATTCTTCCAGTTTACAAGGAAGTCATTGCT 767 Query 361 GAGTTGAAGGCTGCTGGTGCTTCCTGGATTCAGTTTGATGAGCCTACCCTTGTGTTGGAT 420 || ||||||| ||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct 768 GAACTGAAGGCAGCTGGTGCTAGTTGGATTCAGTTTGATGAGCCTACTCTTGTTAAGGAT 827 Query 421 CTTGAGGCTCACCAATTGGAAGCATTCACCAAGGCATATGCTGAACTGGAATCAACTCTA 480 ||||| |||| |||||| ||||||| | | || || | ||| | || ||| | || Sbjct 828 CTTGATTCTCATCAATTGCAAGCATTTTCTCATGCCTACTCAGAATTAGAGTCACCGCTT 887 Query 481 TCTGGCGTTGATGTTCTCATTGAAACCTATTTTGCTGATGTTCCTGCCGGCGCATTCAAA 540 || || | |||| |||||||| || |||||||||||||||||||| | || |||||| Sbjct 888 TCCGGATTAAATGTCCTCATTGAGACATATTTTGCTGATGTTCCTGCTGAAGCTTTCAAA 947 Query 541 ACCCTTACTGCTTTGAAGGGAGTTACTGCCTTTGGTTTTGACTTGGTTCGTGGAACTCAG 600 || | ||| |||| || | |||||||| | || ||||| | ||||||||| | || Sbjct 948 ACAGTGACTTCTTTAAAATGTGTTACTGCACTGGGGTTTGATCTAGTTCGTGGATCAAAG 1007 Query 601 ACCCTTGATTTGATCAAGGGTGGCTTCCCCTCAGGAAAGTACTTGTTTGCAGGAGTGGTT 660 | ||||||||||||||| |||| || || |||| |||||| | ||||| ||||| ||| Sbjct 1008 AATCTTGATTTGATCAAGAGTGGTTTTCCTTCAGAAAAGTATCTATTTGCTGGAGTAGTT 1067 Query 661 GATGGGAGGAACATCTGGGCTAATGATCTTGCTGCATCTCTTGAGCT-CTTGAAATCACT 719 ||||||||||| || |||||||||||||||||||| ||||| || |||| || | || Sbjct 1068 GATGGGAGGAATATTTGGGCTAATGATCTTGCTGCTTCTCT-CAGTACCTTGCAAGCTCT 1126 Query 720 TGAGGGCATTGTAGGAAAAGATAAGCTTGTTGTCTCTACATCTTGCTCATTGCTCCACAC 779 |||| | | || |||||||| |||||||| ||||| || |||||||| | |||||||| Sbjct 1127 TGAGAACGTGGTCGGAAAAGACAAGCTTGTGGTCTCCACCTCTTGCTCGCTTCTCCACAC 1186 Query 780 TGCTGTTGATCTCATCAACGAGACCAAGCTAGATGATGAAATCAAATCATGGTTGGCATT 839 ||| |||||| | | || || || ||| | ||||| ||||| || |||||| | ||||| Sbjct 1187 TGCAGTTGATTTAGTGAATGAAACTAAGTTGGATGAAGAAATTAAGTCATGGCTTGCATT 1246 Query 840 TGCTGCTCAAAAAGTTGTTGAAGTGAATGCTCTTGCCAAGGCATTGGCTGGTGACAAGGA 899 |||||| |||||| | |||||||| || || | || ||||| |||||||| | || || Sbjct 1247 TGCTGCACAAAAATTGGTTGAAGTTAACGCGTTGGCAAAGGCGTTGGCTGGACAAAAAGA 1306 Query 900 TGAGGCATTCTTCTCCGCTAGCGCTGCTGCTCAAGCTTCCAGAAAGACCTCCCCAAGAGT 959 |||||||||||||| |||| ||||| |||| | |||||||| |||| || ||||| Sbjct 1307 CGAGGCATTCTTCTCTGCTAATGCTGCAGCTCGTACGTCCAGAAAATCCTCTCCCAGAGT 1366 Query 960 GACAAATGAAGCTGTTCAAAAGGCTGCTGCTGCTCTCAGAGGTTCTGACCACCGCCGTGC 1019 ||| || | ||||| || |||||||||||||| | | || ||||| || ||| | || Sbjct 1367 GACCAACGGGGCTGTGCAGAAGGCTGCTGCTGCGTTGAAGGGCTCTGATCATCGCAGAGC 1426 Query 1020 AACAAATGTTAGTGCTAGGCTTGATGCCCAACAAAAGAAACTTAACCTCCCGGTTCTCCC 1079 |||| ||| ||||| ||| | || || ||||| ||||| || | || || ||| || Sbjct 1427 GACAACTGTAAGTGCGAGGTTGGAAGCTCAACAGAAGAAGCTGAGTCTTCCATCTCTTCC 1486 Query 1080 GACAACCACCATTGGGTCCTTCCCTCAGACAGTGGAGCTCAGAAGAGTTCGTCGTGAATA 1139 || || ||||| || || |||||||||||| ||||||| |||| |||||| || || || Sbjct 1487 AACCACTACCATCGGTTCTTTCCCTCAGACATTGGAGCTTAGAAAAGTTCGACGAGAGTA 1546 Query 1140 CAAGGCCAAGAAGATCTCTGAGGAGGAGTATGTTAAAGCCATCAAGGAGGAAATCAAGAA 1199 |||||| || |||||||| ||||| || ||||| ||| || | ||||||||||| || Sbjct 1547 CAAGGCTAACAAGATCTCGGAGGAAGATTATGTCAAATATATTACGGAGGAAATCAGCAA 1606 Query 1200 GGTTGTTGACCTCCAGGAAGAGCTTGACATTGATGT-CTTGGTTCATGGAGAGCCCGAGA 1258 || || | |||||||| || || ||||||||||| ||| || || |||||||| |||| Sbjct 1607 AGTAGTCAAACTCCAGGAGGATCTAGACATTGATGTTCTT-GTGCACGGAGAGCCAGAGA 1665 Query 1259 GGAACGATATGGTTGAATACTTTGGGGAACAACTTTCTGGTTTTGCATTCACTGCTAATG 1318 | ||||||||||| || || |||||||| ||| | ||||||||||| || || || |||| Sbjct 1666 GAAACGATATGGTCGAGTATTTTGGGGAGCAATTATCTGGTTTTGCTTTTACAGCCAATG 1725 Query 1319 GATGGGTTCAATCTTATGGATCTCGATGTGTGAAGCCACCAATCATCTATGGTGATGTCA 1378 ||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||| Sbjct 1726 GATGGGTTCAATCTTATGGATCTCGCTGTGTTAAGCCACCAATAATCTACGGTGATGTCA 1785 Query 1379 GTCGCCCAAAGCCAATGAC 1397 |||||||||| |||||||| Sbjct 1786 GTCGCCCAAAACCAATGAC 1804 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59685031740 Database: Tomato Genome cDNA (ITAG release 4.0) Posted date: Mar 21, 2024 4:18 PM Number of letters in database: 44,419,890 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5