BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Stuberosum_proteins.ITAG1.wfunct.fasta 35,004 sequences; 12,505,031 total letters Query= Untitled_sequence Length=561 Score E Sequences producing significant alignments: (Bits) Value Sotub02g007890.1.1FAD binding domain-containing protein (AHRD V1 ... 919 0.0 Sotub02g015720.1.1FAD binding domain-containing protein (AHRD V1 ... 899 0.0 Sotub08g011650.1.1Delta(24)-sterol reductase (AHRD V1 ***- DIM_PEA) 133 2e-37 Sotub07g013680.1.1Sterol reductase (AHRD V1 ***- E1VD15_SOLTU) 132 8e-37 >Sotub02g007890.1.1 FAD binding domain-containing protein (AHRD V1 **-* E9D9V8_COCPO); contains Interpro domain(s) IPR006094 FAD linked oxidase, N-terminal Length=567 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/564 (78%), Positives = 499/564 (88%), Gaps = 4/564 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 M+D+Q P +RPKRKK +D V+FRWI+VIF+VLP S +YF IYLGD+ SE KS+++RQ Sbjct 1 MADVQAP-IRPKRKKNIMDLLVQFRWIVVIFVVLPLSFLYYFSIYLGDVRSECKSYKQRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHDENVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKRARHFEVDL FRN+L Sbjct 60 KEHDENVKKVVKRLKDRNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLN 119 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+ E+M A+VEPLVNMGQISR TVPMN+SLAVVAELDDLTVGGLINGYGIEGSSHIYGLF Sbjct 120 IDTERMIAKVEPLVNMGQISRVTVPMNVSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 179 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV +YE+VLA G++VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI +KEYM+LTY Sbjct 180 SDTVVSYEVVLADGQVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTY 239 Query 241 IPVKGDLQALAQGYIDSFAPKDGD---KSKIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+L+ +AQ YIDSF+PKDGD + K+PDFVE MVY PTE V M G YASKEEAKK Sbjct 240 KPVVGNLKEIAQAYIDSFSPKDGDQDNREKVPDFVETMVYTPTEAVCMTGRYASKEEAKK 299 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 KGN INNVGWWFK WFYQHAQTALKKG+FVEYIPTREYYHRHTRCLYWEGKLILPFGDQ+ Sbjct 300 KGNVINNVGWWFKTWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQW 359 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFR+ GW MPPKVSLLKATQGE IRNYYH+ HVIQDMLVPLYKVGDALEWV+REMEVYP Sbjct 360 WFRFFFGWAMPPKVSLLKATQGEYIRNYYHENHVIQDMLVPLYKVGDALEWVNREMEVYP 419 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 +WLCPH+L++ P+K +YPEPGFE RQGDT+ AQMYTDVGVYYAPG +LRGE FDG E Sbjct 420 LWLCPHRLYRLPLKTMVYPEPGFELHKRQGDTKYAQMYTDVGVYYAPGPILRGEVFDGIE 479 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 AVR++E WLIENHGFQPQYAVSEL EK+FWRMF+G LYE CRKKYRAIGTFMSVYYKSKK Sbjct 480 AVRKLESWLIENHGFQPQYAVSELTEKNFWRMFDGSLYENCRKKYRAIGTFMSVYYKSKK 539 Query 538 GRKTEKEVREAEQAHLETAYAEAD 561 G+KTEKEV++AEQ E E D Sbjct 540 GKKTEKEVQDAEQETAEVETPEVD 563 >Sotub02g015720.1.1 FAD binding domain-containing protein (AHRD V1 **-* E9D9V8_COCPO); contains Interpro domain(s) IPR006094 FAD linked oxidase, N-terminal Length=571 Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/566 (75%), Positives = 492/566 (87%), Gaps = 5/566 (1%) Query 1 MSDLQTP--LVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEK 58 MSD + P V P+RK VD+ + FRWIIVIF VLPFS +YF IYLGD+ SE KS+++ Sbjct 1 MSDAKAPAATVHPRRKIQLVDFLLSFRWIIVIFFVLPFSFLYYFSIYLGDLKSEKKSYKQ 60 Query 59 RQKEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNI 118 RQ EHDENVK+V+KRL+ R+A KDGLVCTAR PW+ VGMRNVDYKRARHFEVDL +FRNI Sbjct 61 RQMEHDENVKEVVKRLEQRNAEKDGLVCTARPPWVVVGMRNVDYKRARHFEVDLSKFRNI 120 Query 119 LEINKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYG 178 L+I+ E+M A+VEPLVNMGQ+SR +PMNLSLAV+AELDDLTVGGLING+G+EGSSHI+G Sbjct 121 LDIDTERMVAKVEPLVNMGQMSRVAIPMNLSLAVLAELDDLTVGGLINGFGVEGSSHIFG 180 Query 179 LFADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRL 238 LF+DTV A E+VLA G++VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI V +Y++L Sbjct 181 LFSDTVVALEVVLADGKVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPVDQYVKL 240 Query 239 TYIPVKGDLQALAQGYIDSFAPKDGDK---SKIPDFVEGMVYNPTEGVMMVGTYASKEEA 295 TY PV+G+L+ LAQ Y DSFAPKDGD+ SK+P+ VEGM+Y PTEGVMM G YAS+ EA Sbjct 241 TYKPVRGNLKELAQAYADSFAPKDGDQDNPSKVPEMVEGMIYGPTEGVMMTGMYASRNEA 300 Query 296 KKKGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGD 355 K++GN INN GWWFKPWFYQHAQTALK+G+FVEYIPTR+YYHRHTR LYWEGKLILPFGD Sbjct 301 KRRGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIPTRDYYHRHTRSLYWEGKLILPFGD 360 Query 356 QFWFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEV 415 QFWFR+LLGWLMPPK++LLKATQ EAIRNYYHD HVIQD+LVPLYKVGD LEWVHREMEV Sbjct 361 QFWFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHVIQDLLVPLYKVGDCLEWVHREMEV 420 Query 416 YPIWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDG 475 YPIWLCPH+++K P++ IYPEPGFE RQGDTE AQMYTD+GVYY PG VLRGE FDG Sbjct 421 YPIWLCPHRIYKLPVRPMIYPEPGFEKHKRQGDTEYAQMYTDIGVYYVPGAVLRGEPFDG 480 Query 476 SEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKS 535 SE R++E WLIENHGFQ QYAV+EL EK+FWRMF+ LYE+CR+KY+AIGTFMSVYYKS Sbjct 481 SEKCRQLELWLIENHGFQAQYAVTELTEKNFWRMFDNSLYEQCRRKYKAIGTFMSVYYKS 540 Query 536 KKGRKTEKEVREAEQAHLETAYAEAD 561 KKGRKTEKEV+EAEQ E EAD Sbjct 541 KKGRKTEKEVQEAEQEKAEQETPEAD 566 >Sotub08g011650.1.1 Delta(24)-sterol reductase (AHRD V1 ***- DIM_PEA) Length=101 Score = 133 bits (335), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 64/93 (69%), Positives = 73/93 (78%), Gaps = 0/93 (0%) Query 469 RGEEFDGSEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTF 528 RGE F+G EAVRR+E W I+NHGFQPQYAV EL EK+FWRMF+G LYE CR+KYRAIGTF Sbjct 5 RGEVFEGIEAVRRLETWFIKNHGFQPQYAVPELSEKNFWRMFDGGLYEHCRRKYRAIGTF 64 Query 529 MSVYYKSKKGRKTEKEVREAEQAHLETAYAEAD 561 MSVYY SKKG+KTE + +AEQ E E D Sbjct 65 MSVYYNSKKGKKTENGLPDAEQEPTELETPEVD 97 >Sotub07g013680.1.1 Sterol reductase (AHRD V1 ***- E1VD15_SOLTU) Length=102 Score = 132 bits (331), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 62/85 (73%), Positives = 73/85 (86%), Gaps = 0/85 (0%) Query 470 GEEFDGSEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFM 529 GE F G EAVRR+E WLI+N+GFQPQYAV EL EK+FWRMF+G LYE CR+KY+AIGTFM Sbjct 17 GEVFHGIEAVRRLETWLIKNYGFQPQYAVPELGEKNFWRMFDGGLYEHCRRKYKAIGTFM 76 Query 530 SVYYKSKKGRKTEKEVREAEQAHLE 554 SVYY SKKG+KTEKE+++AEQ E Sbjct 77 SVYYNSKKGKKTEKELQDAEQETTE 101 Lambda K H a alpha 0.321 0.138 0.430 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 4051129055 Database: Stuberosum_proteins.ITAG1.wfunct.fasta Posted date: Jun 25, 2024 1:46 PM Number of letters in database: 12,505,031 Number of sequences in database: 35,004 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40