TBLASTN 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: N.benthamiana Genome v1.0.1 predicted cDNA
           57,140 sequences; 82,582,885 total letters



Query= Niben101Scf05801g00015.1

Length=176
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Niben101Scf05801g00015.1AT1G55190.1 *-*- PRA1 (Prenylated rab acc...  192     1e-62
Niben101Scf04361g00012.1AT1G55190.1 *-*- PRA1 (Prenylated rab acc...  183     3e-59
Niben101Scf09321g02005.1AT1G55190.1 *-*- PRA1 (Prenylated rab acc...  62.8    3e-12
Niben101Scf03778g01006.1AT1G55190.1 *-*- PRA1 (Prenylated rab acc...  60.8    1e-11


>Niben101Scf05801g00015.1 AT1G55190.1 *-*- PRA1 (Prenylated rab acceptor) family protein 
LENGTH=189 IPR004895 (Prenylated rab acceptor PRA1) 
Length=531

 Score = 192 bits (487),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
 Frame = +1

Query  1    MRPAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNY  60
            MRPAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNY
Sbjct  1    MRPAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNY  180

Query  61   AiivllilflsllWHPISMIvflvvfvawfflyfHRDEPLMIFNRMVDDrivlvvlsvit  120
            AIIVLLILFLSLLWHPISMIVFLVVFVAWFFLYFHRDEPLMIFNRMVDDRIVLVVLSVIT
Sbjct  181  AIIVLLILFLSLLWHPISMIVFLVVFVAWFFLYFHRDEPLMIFNRMVDDRIVLVVLSVIT  360

Query  121  vvslvltrvWlnvlvsivvgmvlvflHCTFRITedlfleeddaadGGLLSFIGSSS  176
            VVSLVLTRVWLNVLVSIVVGMVLVFLHCTFRITEDLFLEEDDAADGGLLSFIGSSS
Sbjct  361  VVSLVLTRVWLNVLVSIVVGMVLVFLHCTFRITEDLFLEEDDAADGGLLSFIGSSS  528


>Niben101Scf04361g00012.1 AT1G55190.1 *-*- PRA1 (Prenylated rab acceptor) family protein 
LENGTH=189 IPR004895 (Prenylated rab acceptor PRA1) 
Length=531

 Score = 183 bits (464),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 169/176 (96%), Positives = 175/176 (99%), Gaps = 0/176 (0%)
 Frame = +1

Query  1    MRPAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNY  60
            MRPAYDFSFNRARSGT+SFYARRRPWRELLAHPSSYTRPISLADFTS+VKRNLGYFRVNY
Sbjct  1    MRPAYDFSFNRARSGTISFYARRRPWRELLAHPSSYTRPISLADFTSRVKRNLGYFRVNY  180

Query  61   AiivllilflsllWHPISMIvflvvfvawfflyfHRDEPLMIFNRMVDDrivlvvlsvit  120
            AIIVLLILFLSLLWHPISMIVFLVVFVAWFFLYFHRDEPLMIFNRMVDDRIVLVVLSV+T
Sbjct  181  AIIVLLILFLSLLWHPISMIVFLVVFVAWFFLYFHRDEPLMIFNRMVDDRIVLVVLSVVT  360

Query  121  vvslvltrvWlnvlvsivvgmvlvflHCTFRITedlfleeddaadGGLLSFIGSSS  176
            V SLVLTRVWLNVLVSIVVG+VL+FLHCTFRITEDLFLEEDDAADGGLLSF+GSSS
Sbjct  361  VTSLVLTRVWLNVLVSIVVGLVLIFLHCTFRITEDLFLEEDDAADGGLLSFVGSSS  528


>Niben101Scf09321g02005.1 AT1G55190.1 *-*- PRA1 (Prenylated rab acceptor) family protein 
LENGTH=189 IPR004895 (Prenylated rab acceptor PRA1) 
Length=549

 Score = 62.8 bits (151),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 51/107 (48%), Positives = 70/107 (65%), Gaps = 1/107 (1%)
 Frame = +1

Query  3    PAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNYAi  62
            PA     +RA+         RRPW+E+  +  S   P  + D  S++K N+ YF++NYAI
Sbjct  40   PANVEYISRAKDRIKEGLGTRRPWKEVF-NFHSLNLPSGVNDAVSRIKTNISYFQMNYAI  216

Query  63   ivllilflsllWHPISMIvflvvfvawfflyfHRDEPLMIFNRMVDD  109
            + L I+FLSLLWHPIS+IVFLV+   W FLYF RDEPL++F R++ D
Sbjct  217  VALGIVFLSLLWHPISLIVFLVLMAIWLFLYFLRDEPLVVFGRLISD  357


>Niben101Scf03778g01006.1 AT1G55190.1 *-*- PRA1 (Prenylated rab acceptor) family protein 
LENGTH=189 IPR004895 (Prenylated rab acceptor PRA1) 
Length=549

 Score = 60.8 bits (146),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 50/107 (47%), Positives = 70/107 (65%), Gaps = 1/107 (1%)
 Frame = +1

Query  3    PAYDFSFNRARSGTLSFYARRRPWRELLAHPSSYTRPISLADFTSQVKRNLGYFRVNYAi  62
            PA     +RA+         RRPW+E+  +  S   P  ++D  S++K N+ YF++NYAI
Sbjct  40   PANVEYISRAKDRIKEGLGTRRPWKEMF-NFHSLNLPSGVSDAISRIKTNISYFQMNYAI  216

Query  63   ivllilflsllWHPISMIvflvvfvawfflyfHRDEPLMIFNRMVDD  109
            + L I+FLSLLWH IS+IVFLV+   W FLYF RDEPL++F R++ D
Sbjct  217  VALGIVFLSLLWHAISLIVFLVLMALWLFLYFLRDEPLVVFGRLISD  357



Lambda      K        H        a         alpha
   0.328    0.139    0.458    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1710376824


  Database: N.benthamiana Genome v1.0.1 predicted cDNA
    Posted date:  Mar 21, 2024  4:04 PM
  Number of letters in database: 82,582,885
  Number of sequences in database:  57,140



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40