BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Niben261_genome.fasta 17,639 sequences; 3,035,611,412 total letters Query= Untitled_sequence Length=1242 Score E Sequences producing significant alignments: (Bits) Value Niben261Chr10 1206 0.0 Niben261Chr13 1173 0.0 Niben261Chr08 200 2e-48 Niben261Chr01 183 2e-43 >Niben261Chr10 Length=138251820 Score = 1206 bits (653), Expect = 0.0 Identities = 859/961 (89%), Gaps = 3/961 (0%) Strand=Plus/Minus Query 132 AATTCAGTTATGGCCGGAAGTGGTGTCGTTACAGTTTACGGAAATGGTGCTCTCACAGAG 191 ||||| ||||||||||||| ||||| || ||| |||||||||||||||| ||||| ||| Sbjct 109554157 AATTCGATTATGGCCGGAAGCGGTGTGGTAACACTTTACGGAAATGGTGCACTCACCGAG 109554098 Query 192 ACAACCAAGCAATCCCCCTTCTCTGTGAAAGTGGGTCTCGCTCAGATGCTTCGGGGAGGC 251 || || ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct 109554097 ACTACAAAGCAATCCCCTTTCTCAGTGAAAGTGGGTCTCGCTCAGATGCTTCGCGGCGGC 109554038 Query 252 GTTATCATGGACGTTGTTAATGCTGAACAGGCTCGTATAGCCGAGGAGGCCGGTGCGTGT 311 |||||||||||||| || ||| | || ||||| ||||||||||||||||| || |||||| Sbjct 109554037 GTTATCATGGACGTCGTCAATCCCGAGCAGGCCCGTATAGCCGAGGAGGCAGGCGCGTGT 109553978 Query 312 GCTGTCATGGCTCTTGAGCGTGTCCCTGCTGATATACGCGCTCAGGGCGGCGTTGCACGT 371 || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || || Sbjct 109553977 GCCGTCATGGCCCTTGAGCGCGTCCCCGCTGATATACGCGCTCAGGGCGGCGTAGCCCGC 109553918 Query 372 ATGTCGGATCCCCAGCTTATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCC 431 ||||||||||||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct 109553917 ATGTCGGATCCCCAGCTTATCAAAGAAATCAAACAGGCTGTTACCATCCCCGTTATGGCC 109553858 Query 432 AAGGCTCGTATTGGTCATTTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTAC 491 ||||| ||||| ||||| ||||| ||||| |||||||| |||||||| |||||||||||| Sbjct 109553857 AAGGCCCGTATCGGTCACTTCGTCGAGGCCCAAATCCTCGAGGCTATCGGAATCGATTAC 109553798 Query 492 GTTGATGAATCGGAGGTGCTTACCCTTGCTGACGATGAGAACCACATCAACAAGCACAAT 551 || |||||||| || || || || || || |||||||||||||||||||||||||||||| Sbjct 109553797 GTGGATGAATCAGAAGTCCTCACTCTCGCCGACGATGAGAACCACATCAACAAGCACAAT 109553738 Query 552 TTCCGTATCCCCTTTGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGT 611 ||||| || || |||||||||||||||||||| | || || || || ||||||||| | Sbjct 109553737 TTCCGCATTCCTTTTGTCTGTGGCTGCCGTAACCTCGGCGAAGCCCTCCGCCGTATCAGG 109553678 Query 612 GAGGGTGCTGCCATGATTCGGACCAAGGGGGAAGCTGGTACCGGAAACATTATCGAGGCT 671 ||||| || |||||||| || |||||||||||||| |||||||| ||||| ||||| || Sbjct 109553677 GAGGGAGCCGCCATGATACGCACCAAGGGGGAAGCCGGTACCGGCAACATCATCGAAGCC 109553618 Query 672 GTTCGTCATGTGCGTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGAT 731 || ||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct 109553617 GTCCGTCACGTGCGTTCCGTGATGGGTGATATCAGGGTGCTGCGAAACATGGATGATGAT 109553558 Query 732 GAGGTTTTCACCTTTGCTAAGAAGATTCAGGCACCATACGATCTGGTGATGCAAACAAAG 791 ||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||| Sbjct 109553557 GAGGTTTTCACTTTTGCTAAGAAGCTTCAGGCACCGTACGACCTGGTGATGCAAACAAAA 109553498 Query 792 CAACTTGGTAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGAT 851 || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 109553497 CAGCTTGGAAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCTACACCAGCAGAC 109553438 Query 852 GCAGCGCTTATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGGTTCTGGTATCTTCAAG 911 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct 109553437 GCAGCGCTTATGATGCAGTTGGGATGTGACGGAGTGTTCGTGGGTTCTGGAATTTTCAAG 109553378 Query 912 AGTGGTGACCCTGCAAAGAGGGGACGTGCCATCGTGCAAGCAGTGACTCATTACAGTGAC 971 |||||||||||||| || |||||||| || ||||||||||| |||||||||||||||||| Sbjct 109553377 AGTGGTGACCCTGCCAAAAGGGGACGCGCTATCGTGCAAGCCGTGACTCATTACAGTGAC 109553318 Query 972 CCACAATTGCTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATCAATCTT 1031 ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 109553317 CCAGGACTGCTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATTAATCTT 109553258 Query 1032 GATGAAAAGGTGGAGAGGTATGCCAATCGTTCTGAGTGATGATGGTT-GTAAGTTTTAGA 1090 ||||| |||||||| |||||||| ||||||||||||||| ||||||| |||||| | ||| Sbjct 109553257 GATGATAAGGTGGAAAGGTATGCTAATCGTTCTGAGTGA-GATGGTTTGTAAGTCT-AGA 109553200 Query 1091 A 1091 | Sbjct 109553199 A 109553199 >Niben261Chr13 Length=153652170 Score = 1173 bits (635), Expect = 0.0 Identities = 848/954 (89%), Gaps = 2/954 (0%) Strand=Plus/Plus Query 132 AATTCAGTTATGGCCGGAAGTGGTGTCGTTACAGTTTACGGAAATGGTGCTCTCACAGAG 191 ||||| ||||||||||||| ||||| || ||| |||||||||||||||| ||||| ||| Sbjct 105170072 AATTCGATTATGGCCGGAAGCGGTGTGGTAACACTTTACGGAAATGGTGCACTCACCGAG 105170131 Query 192 ACAACCAAGCAATCCCCCTTCTCTGTGAAAGTGGGTCTCGCTCAGATGCTTCGGGGAGGC 251 || || ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct 105170132 ACTACAAAGCAATCCCCTTTCTCAGTGAAAGTGGGTCTCGCTCAGATGCTTCGCGGCGGC 105170191 Query 252 GTTATCATGGACGTTGTTAATGCTGAACAGGCTCGTATAGCCGAGGAGGCCGGTGCGTGT 311 |||||||||||||| || ||||| || ||||| |||||||| |||||||| || |||||| Sbjct 105170192 GTTATCATGGACGTCGTCAATGCCGAGCAGGCCCGTATAGCTGAGGAGGCAGGCGCGTGT 105170251 Query 312 GCTGTCATGGCTCTTGAGCGTGTCCCTGCTGATATACGCGCTCAGGGCGGCGTTGCACGT 371 || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || || Sbjct 105170252 GCCGTCATGGCCCTTGAGCGCGTCCCCGCTGATATACGCGCTCAGGGCGGCGTAGCCCGC 105170311 Query 372 ATGTCGGATCCCCAGCTTATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCC 431 |||||||||||||||||||||||||||||||||||||| || || || || ||||||||| Sbjct 105170312 ATGTCGGATCCCCAGCTTATCAAAGAAATCAAACAGGCCGTAACCATCCCCGTTATGGCC 105170371 Query 432 AAGGCTCGTATTGGTCATTTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTAC 491 ||||| ||||| ||||| ||||| ||||| |||||||| |||||||| |||||||||||| Sbjct 105170372 AAGGCCCGTATCGGTCACTTCGTCGAGGCCCAAATCCTCGAGGCTATCGGAATCGATTAC 105170431 Query 492 GTTGATGAATCGGAGGTGCTTACCCTTGCTGACGATGAGAACCACATCAACAAGCACAAT 551 || || ||||| || || || || || || |||||||||||||||||||||||||||||| Sbjct 105170432 GTGGACGAATCAGAAGTCCTCACTCTCGCCGACGATGAGAACCACATCAACAAGCACAAT 105170491 Query 552 TTCCGTATCCCCTTTGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGT 611 ||||| || || |||||||||||||||||||| | || || || || ||||||||| | Sbjct 105170492 TTCCGCATTCCTTTTGTCTGTGGCTGCCGTAACCTTGGCGAAGCCCTCCGCCGTATCAGG 105170551 Query 612 GAGGGTGCTGCCATGATTCGGACCAAGGGGGAAGCTGGTACCGGAAACATTATCGAGGCT 671 ||||| || |||||||| || |||||||||||||| |||||||| ||||| |||||||| Sbjct 105170552 GAGGGAGCCGCCATGATACGCACCAAGGGGGAAGCCGGTACCGGCAACATCATCGAGGCC 105170611 Query 672 GTTCGTCATGTGCGTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGAT 731 || ||||| ||||||||||| |||||||||||||||||||| || |||||||| |||||| Sbjct 105170612 GTCCGTCACGTGCGTTCCGTGATGGGTGATATCAGGGTGCTACGAAACATGGATGATGAT 105170671 Query 732 GAGGTTTTCACCTTTGCTAAGAAGATTCAGGCACCATACGATCTGGTGATGCAAACAAAG 791 ||||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct 105170672 GAGGTTTTCACTTTTGCTAAGAAGCTTCAGGCACCGTACGACCTGGTCATGCAAACAAAA 105170731 Query 792 CAACTTGGTAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGAT 851 || || || |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 105170732 CAGCTCGGAAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCAACACCAGCAGAC 105170791 Query 852 GCAGCGCTTATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGGTTCTGGTATCTTCAAG 911 |||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||| Sbjct 105170792 GCAGCGCTTATGATGCAGTTGGGATGCGACGGAGTGTTCGTGGGTTCTGGAATTTTCAAG 105170851 Query 912 AGTGGTGACCCTGCAAAGAGGGGACGTGCCATCGTGCAAGCAGTGACTCATTACAGTGAC 971 |||||||||||||| || |||||||| || ||||||||||| |||||||| ||||||||| Sbjct 105170852 AGTGGTGACCCTGCCAAAAGGGGACGCGCTATCGTGCAAGCCGTGACTCACTACAGTGAC 105170911 Query 972 CCACAATTGCTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATCAATCTT 1031 ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 105170912 CCAGGACTGCTGGCTGAAATTAGCTGTGGGCTTGGTGAGGCTATGGTTGGAATTAATCTT 105170971 Query 1032 GATGAAAAGGTGGAGAGGTATGCCAATCGTTCTGAGTGATGATGGTT-GTAAGT 1084 ||||| ||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct 105170972 GATGATAAGGTGGAGAGGTATGCTAATCGTTCCGAGTGA-GATGGTTTGTAAGT 105171024 >Niben261Chr08 Length=137820123 Score = 200 bits (108), Expect = 2e-48 Identities = 383/516 (74%), Gaps = 17/516 (3%) Strand=Plus/Minus Query 390 ATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGTATTGGTCAT 449 |||||||| |||||||||||||| ||||||| || ||||| || || || | || ||| Sbjct 8005670 ATCAAAGAGATCAAACAGGCTGTCTCAATTCCCGTAATGGCAAAAGCCCGAGTCGGGCAT 8005611 Query 450 TTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGA-ATCGGAGGT 508 || ||||| || || |||||||| ||||||||| || || || || || | | ||||| Sbjct 8005610 TTTGTGGAAGCCCAGATCCTTGAAGCTATTGGAGCAGACTATGTAGACGAGAGC-GAGGT 8005552 Query 509 GCTTACCCTTGCTGACGATG-AGAACCA--CATCAACAAGCACAATTTCCGTATCCCCTT 565 ||| |||| | ||||| ||| | ||||||||| |||||||||||| ||| || Sbjct 8005551 -TTTAGCCTT--AGGCGATGAAGATCATTTCATCAACAAACACAATTTCCGTGCCCCATT 8005495 Query 566 TGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCTGCCAT 625 |||||||| || || || | || || || | | | ||||||| |||||||| || Sbjct 8005494 CGTCTGTGGGTGTCGAGATCTCGGGGAAGCATTAAGAAGAGTCCGTGAAGGTGCTGCGAT 8005435 Query 626 GATTCGGACCAAGGGGGAAGC--T-GGTACCGGAAACATTATCGAGGCTGTTCGTCATGT 682 |||| ||||| | ||||| | ||||| || || ||| | || | |||||| |||| Sbjct 8005434 GATTAGGACCCAAGGGGATCTATTAGGTACAGGTAATATTGTTGACACAGTTCGTAATGT 8005375 Query 683 GCGTTCCGTTATGGGTGATATCAGGGTGCTGCGC-AACATGGACGATGATGAGGTTTTCA 741 | | || ||||| ||||| || | || | | ||||||||||| ||||||||||||| Sbjct 8005374 GAGGAAAGTGATGGGAGATATTAGACTTCT-CTCAAACATGGACGAAGATGAGGTTTTCA 8005316 Query 742 CCTTTGCTAAGAAGAT-TCAGGCACCATACGATCTGGT-GATGCAAACAAAGCAACTTGG 799 | ||| | |||||||| || || || || ||| | || | | ||||| ||||| | || Sbjct 8005315 CTTTTTCGAAGAAGATCTC-CGCGCCTTATGATATCGTCGCT-CAAACGAAGCAGATGGG 8005258 Query 800 TAGGCTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCT 859 ||| || || ||||| || || ||||| ||||| | | ||| || |||||||||||||| Sbjct 8005257 TAGACTTCCGGTGGTACATTTCGCAGCCGGTGGTATTGTGACCCCTGCAGATGCAGCGCT 8005198 Query 860 TATGATGCAGTTGGGATGTGACGGCGTGTTCGTGGG 895 ||||||||| |||| ||||| |||||||| |||| Sbjct 8005197 CATGATGCAGCTGGGTTGTGATGGCGTGTTTTTGGG 8005162 >Niben261Chr01 Length=186295347 Score = 183 bits (99), Expect = 2e-43 Identities = 376/512 (73%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 390 ATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGTATTGGTCAT 449 ||||||| ||||||||||| || ||||||| || ||||| || || || | || ||| Sbjct 107939108 ATCAAAGCGATCAAACAGGCCGTCTCAATTCCCGTAATGGCAAAAGCCCGAGTCGGGCAT 107939049 Query 450 TTCGTGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGA-ATCGGAGGT 508 || |||| || || |||||||| ||||||||| || || || || || | | ||||| Sbjct 107939048 TTTCTGGAAGCCCAGATCCTTGAAGCTATTGGAGCAGACTATGTAGACGAGAGC-GAGGT 107938990 Query 509 GCTTACCCTT-GCTGACGATGAGAACCACATCAACAAGCACAATTTCCGTATCCCCTTTG 567 ||| |||| || ||||| || | ||||||||| |||||||||||| ||| || | Sbjct 107938989 -TTTAGCCTTAGCCGACGAAGATCATTTCATCAACAAACACAATTTCCGTGCCCCATTCG 107938931 Query 568 TCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCTGCCATGA 627 ||||||| || || || | || || || | | | ||||||| |||||||| |||| Sbjct 107938930 TCTGTGGGTGTCGAGATCTCGGAGAAGCATTAAGAAGAGTCCGTGAAGGTGCTGCGATGA 107938871 Query 628 TTCGGACCAAGGGGGAAGC--T-GGTACCGGAAACATTATCGAGGCTGTTCGTCATGTGC 684 || ||||| | || || | ||||| || || ||| | || | ||||| ||||| Sbjct 107938870 TTAGGACCCAAGGAGATCTATTAGGTACAGGTAATATTGTGGACACAGTTCGCAATGTGA 107938811 Query 685 GTTCCGTTATGGGTGATATCAGGGTGCTGCGCAACATGGACGATGATGAGGTTTTCACCT 744 | || ||||| ||||| || || || ||||||||||| |||||||||||||| | Sbjct 107938810 GGAAAGTGATGGGAGATATTAGAGTTCTATCAAACATGGACGAAGATGAGGTTTTCACTT 107938751 Query 745 TTGCTAAGAAGAT-TCAGGCACCATACGATCTGGTGATGCAAACAAAGCAACTTGGTAGG 803 || | || ||||| || || || || ||| | || |||||| ||||| | ||||| Sbjct 107938750 TTTCAAAAAAGATCTCC-GCGCCTTATGATATCGTTGCGCAAACGAAGCAGATGGGTAGA 107938692 Query 804 CTCCCTGTGGTTCACTTTGCAGCAGGTGGGGTGGCGACACCAGCAGATGCAGCGCTTATG 863 || || ||||| || |||||||| ||||| | | ||| ||||| ||||||||||| ||| Sbjct 107938691 CTTCCGGTGGTACATTTTGCAGCTGGTGGTATTGTGACCCCAGCTGATGCAGCGCTCATG 107938632 Query 864 ATGCAGTTGGGATGTGACGGCGTGTTCGTGGG 895 |||||| |||| ||||| |||||||| |||| Sbjct 107938631 ATGCAGCTGGGTTGTGATGGCGTGTTTTTGGG 107938600 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 3678519677304 Database: Niben261_genome.fasta Posted date: Jul 1, 2025 1:16 PM Number of letters in database: 3,035,611,412 Number of sequences in database: 17,639 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5