BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= 1 Length=411 Score E Sequences producing significant alignments: (Bits) Value Solyc12g057140.1Unknown Protein (AHRD V1) 760 0.0 Solyc12g057160.1Unknown Protein (AHRD V1) 455 1e-127 Solyc12g057150.1Unknown Protein (AHRD V1) 375 1e-103 Solyc12g087790.1Unknown Protein (AHRD V1) 121 5e-27 Solyc04g074730.1Unknown Protein (AHRD V1) 95.3 3e-19 >Solyc12g057140.1 Unknown Protein (AHRD V1) Length=411 Score = 760 bits (411), Expect = 0.0 Identities = 411/411 (100%), Gaps = 0/411 (0%) Strand=Plus/Plus Query 1 ATGGCATACTCAAAGGTGATTATTGCTCTAATGTTGGCGTTTATCGCCGGATCTGCTTTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCATACTCAAAGGTGATTATTGCTCTAATGTTGGCGTTTATCGCCGGATCTGCTTTC 60 Query 61 GCACAGGCACCGGGAGCATCTCCAGCATCTTCTCCGAAGAGTTCTCCGGCACCGGTGGCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCACAGGCACCGGGAGCATCTCCAGCATCTTCTCCGAAGAGTTCTCCGGCACCGGTGGCA 120 Query 121 TCGCCACCGGTGGCGACTCCTCCTCCTACTACATCAACACCACCTATCGTTGCCCCTGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCGCCACCGGTGGCGACTCCTCCTCCTACTACATCAACACCACCTATCGTTGCCCCTGCA 180 Query 181 AATCCTCCTACTACTGCATCTTCTCCATCTGACTCTCCATTAGCTTCTCCACCAGCTCCA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AATCCTCCTACTACTGCATCTTCTCCATCTGACTCTCCATTAGCTTCTCCACCAGCTCCA 240 Query 241 CCAACTGCCGAGACTCCGTCATCATCTCCTTCCGGTGCTGCTTCTCCTCCAACCATCGCC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CCAACTGCCGAGACTCCGTCATCATCTCCTTCCGGTGCTGCTTCTCCTCCAACCATCGCC 300 Query 301 GCCACTCCCGGAGATTCTCCTACCGCATCTCCTAACTCTGCTTCCTTGAACAGGGTCGCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCCACTCCCGGAGATTCTCCTACCGCATCTCCTAACTCTGCTTCCTTGAACAGGGTCGCC 360 Query 361 GTCGCCGGATCTGCCGTTGCAGCTGTGTTTGCTGCTGCTTTGATGCTCTAA 411 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GTCGCCGGATCTGCCGTTGCAGCTGTGTTTGCTGCTGCTTTGATGCTCTAA 411 >Solyc12g057160.1 Unknown Protein (AHRD V1) Length=399 Score = 455 bits (246), Expect = 1e-127 Identities = 358/411 (87%), Gaps = 12/411 (3%) Strand=Plus/Plus Query 1 ATGGCATACTCAAAGGTGATTATTGCTCTAATGTTGGCGTTTATCGCCGGATCTGCTTTC 60 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCATACTCAAAGGTGATAATTGCTCTAATGTTGGCGTTTATCGCCGGATCTGCTTTC 60 Query 61 GCACAGGCACCGGGAGCATCTCCAGCATCTTCTCCGAAGAGTTCTCCGGCACCGGTGGCA 120 |||||||||||||||||| |||| ||| |||||||||||| ||| ||||||||||| ||| Sbjct 61 GCACAGGCACCGGGAGCAGCTCCGGCAGCTTCTCCGAAGATTTCACCGGCACCGGTAGCA 120 Query 121 TCGCCACCGGTGGCGACTCCTCCTCCTACTACATCAACACCACCTATCGTTGCCCCTGCA 180 || ||||||||||| |||||||| | || || |||||| |||||||| ||| |||||| Sbjct 121 TCACCACCGGTGGCTACTCCTCCGTCAACAACGTCAACATCACCTATCTCTGCTCCTGCA 180 Query 181 AATCCTCCTACTACTGCATCTTCTCCATCTGACTCTCCATTAGCTTCTCCACCAGCTCCA 240 ||| |||||||||||||||||||||||| || | || | | |||| |||||| Sbjct 181 AATGCTCCTACTACTGCATCTTCTCCAT-TGGCA-TC--T---C--CTCCG---GCTCCA 228 Query 241 CCAACTGCCGAGACTCCGTCATCATCTCCTTCCGGTGCTGCTTCTCCTCCAACCATCGCC 300 |||||| ||||||||||| | || |||||||||||||||||||||||||| | || ||| Sbjct 229 CCAACTTCCGAGACTCCGGCGTCGTCTCCTTCCGGTGCTGCTTCTCCTCCGTCTATTGCC 288 Query 301 GCCACTCCCGGAGATTCTCCTACCGCATCTCCTAACTCTGCTTCCTTGAACAGGGTCGCC 360 ||| ||||||||| ||||||| | | |||||||||||||||||| |||||||| |||||| Sbjct 289 GCCGCTCCCGGAGGTTCTCCTTCTGAATCTCCTAACTCTGCTTCATTGAACAGAGTCGCC 348 Query 361 GTCGCCGGATCTGCCGTTGCAGCTGTGTTTGCTGCTGCTTTGATGCTCTAA 411 || ||||||||||| |||| |||||| |||||||||||||||||||||||| Sbjct 349 GTTGCCGGATCTGCTGTTGTAGCTGTCTTTGCTGCTGCTTTGATGCTCTAA 399 >Solyc12g057150.1 Unknown Protein (AHRD V1) Length=348 Score = 375 bits (203), Expect = 1e-103 Identities = 306/353 (87%), Gaps = 18/353 (5%) Strand=Plus/Minus Query 1 ATGGCATACTCAAAGGTGATTATTGCTCTAATGTTGGCGTTTATCGCCGGATCTGCTTTC 60 ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 338 ATGGCGTACTCAAAGGTGATTATTGCGTTAATGTTGGCATTTATCGCCGGATCTGCTTTC 279 Query 61 GCACAGGCACCGGGAGCATCTCCAGCATCTTCTCCGAAGAGTTCTCCGGCACCGGTGGCA 120 ||||||||||||||| ||||||| ||| |||||||||||| ||| ||||||||||| ||| Sbjct 278 GCACAGGCACCGGGAACATCTCCGGCAGCTTCTCCGAAGATTTCACCGGCACCGGTAGCA 219 Query 121 TCGCCACCGGTGGCGACTCCTCCTCCTACTACATCAACACCACCTATCGTTGCCCCTGCA 180 || ||||||||||| ||| || || |||||||||||||||||||| Sbjct 218 TCACCACCGGTGGC---------------TAC-TC--CATCACCTATCGTTGCCCCTGCA 177 Query 181 AATCCTCCTACTACTGCATCTTCTCCATCTGACTCTCCATTAGCTTCTCCACCAGCTCCA 240 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| |||||| Sbjct 176 AATCCTCCTACTACTGCATCTCCTCCATCTGATTCTCCATTGGCATCTCCACCTGCTCCA 117 Query 241 CCAACTGCCGAGACTCCGTCATCATCTCCTTCCGGTGCTGCTTCTCCTCCAACCATCGCC 300 |||||||||||||||||| | || |||||||||||||||||||||||||| | || ||| Sbjct 116 CCAACTGCCGAGACTCCGGCGTCGTCTCCTTCCGGTGCTGCTTCTCCTCCGTCTATTGCC 57 Query 301 GCCACTCCCGGAGATTCTCCTACCGCATCTCCTAACTCTGCTTCCTTGAACAG 353 ||| ||||||||| ||||||||| | |||||||||||||||||| |||||||| Sbjct 56 GCCGCTCCCGGAGGTTCTCCTACTGAATCTCCTAACTCTGCTTCGTTGAACAG 4 >Solyc12g087790.1 Unknown Protein (AHRD V1) Length=156 Score = 121 bits (65), Expect = 5e-27 Identities = 77/83 (93%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 214 TCTCCATTAGCTTCTCCACCAGCTCCACCAACTGCCGAGACTCCGTCATCATCTCCTTCC 273 |||||||| || ||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct 83 TCTCCATTGGCATCTCCACCAGCTCCACCAACTGCCGAGACTCCGGCGTCGTCTCCTTCC 24 Query 274 GGTGCTGCTTCTCCTCCAACCAT 296 |||||||||||||||||| |||| Sbjct 23 GGTGCTGCTTCTCCTCCATCCAT 1 Score = 84.2 bits (45), Expect = 7e-16 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 41 TTATCGCCGGATCTGCTTTCGCACAGGCACCGGGAGCATCTCCAGCATCTT 91 |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 156 TTATTGCCGGATCTGCTTTCGCACAGGCACCGGGAGCATCTCCGGCATCTT 106 >Solyc04g074730.1 Unknown Protein (AHRD V1) Length=396 Score = 95.3 bits (51), Expect = 3e-19 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 188 CTACTACTGCATCTTCTCCATCTGACTCTCCATTAGCTTCTCCACCAGCTCCACCAACTG 247 || || ||||| ||| || ||||| |||||| | | |||||||||||||||||||| | Sbjct 170 CTCCTGCTGCAAGTTCACCTTCTGATTCTCCAGTTTCATCTCCACCAGCTCCACCAACCG 229 Query 248 CCGAGACTCCGTCATCATCTCCTTCCG--G-TGCTGCTTCTCCTCCAACCATCGCCGCCA 304 ||||||||| | || ||||| ||| | || |||| | |||| |||||| || | Sbjct 230 TTGAGACTCCGGCTTCTGCTCCTACCGCCGGTGGTGCTCTTGCTCCGTCCATCGGTGCTA 289 Query 305 CTCCCGGAGATTCTCCTACCGCATCTCCTAACTCTGCTTCCTTGAACAGGGTCGCCGTCG 364 | || | | |||||| || | ||||| || |||| ||||||||||| ||||| || | Sbjct 290 CACCAAGCGGTTCTCCAACTTCCTCTCCAAATGCTGCATCCTTGAACAGAGTCGCTGTTG 349 Query 365 CCGGATCTGCCGTTGCAGCTGTGTTTGCTGCTGCTTTG 402 | ||||||||||| | |||| | || ||||| ||||| Sbjct 350 CTGGATCTGCCGTCGTAGCTATCTTCGCTGCGTCTTTG 387 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15924341016 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5