BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (build SL2.50) 13 sequences; 823,944,041 total letters Query= Untitled_sequence Length=1011 Score E Sequences producing significant alignments: (Bits) Value SL2.50ch05No definition line found 1838 0.0 SL2.50ch01No definition line found 106 8e-21 SL2.50ch12No definition line found 102 1e-19 SL2.50ch03No definition line found 95.3 2e-17 SL2.50ch07No definition line found 91.6 2e-16 SL2.50ch08No definition line found 87.9 3e-15 SL2.50ch04No definition line found 87.9 3e-15 SL2.50ch00No definition line found 84.2 4e-14 SL2.50ch11No definition line found 82.4 1e-13 SL2.50ch10No definition line found 80.5 5e-13 SL2.50ch06No definition line found 76.8 6e-12 >SL2.50ch05 No definition line found Length=65875088 Score = 1838 bits (995), Expect = 0.0 Identities = 1004/1008 (99%), Gaps = 2/1008 (0%) Strand=Plus/Plus Query 1 CCCATCTCGTTCACCGCTCTCGAATCATACAAGATACATATAGATACACATGTTAGTTCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14111 CCCATCTCGTTCACCGCTCTCGAATCATACAAGATACATATAGATACACATGTTAGTTCA 14170 Query 61 ATATGCATGTATTTTGGTTACATAGATAAATCTTGTTCACCTCCCTTTCTAATTCACTAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14171 ATATGCATGTATTTTGGTTACATAGATAAATCTTGTTCACCTCCCTTTCTAATTCACTAT 14230 Query 121 ATCGACTAGCAAAATAATATGTATCTAAGTGAATAAAACATGTATCCAGATGTATCTGAC 180 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 14231 ATCTACTAGCAAAATAATATGTATCTAAGTGAATAAAACATGTATCCAAATGTATCTGAC 14290 Query 181 TTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTCTTTCAAACTAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14291 TTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTCTTTCAAACTAT 14350 Query 241 AATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTTCTCCTAATATAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14351 AATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTTCTCCTAATATAA 14410 Query 301 AATTTAATATGAGAAGAAAAGACAATTTTAAATTATTTTTATTACGTTAAAGAGCATTTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14411 AATTTAATATGAGAAGAAAAGACAATTTTAAATTATTTTTATTACGTTAAAGAGCATTTT 14470 Query 361 TTAATCCTTATATGTACTTAAAAGTGACCTATAATAAGTAAGACTTCCTTTACTCTTACT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14471 TTAATCCTTATATGTACTTAAAAGTGACCTATAATAAGTAAGACTTCCTTTACTCTTACT 14530 Query 421 CTTTCTATTCAACTCATTAGGTTTTGCATACACATTTGCTTGTACATCAAGCAAAGAAAT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14531 CTTTCTATTCAACTCATTAGGTTTTGCATACACATTTGCTTGTACATCAAGCAAAGAAAT 14590 Query 481 GTAATGATCTTGACACCCTTTGTGAATACCAAAGTGTAGTCCAATTTAAGTCTGCATTTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14591 GTAATGATCTTGACACCCTTTGTGAATACCAAAGTGTAGTCCAATTTAAGTCTGCATTTT 14650 Query 541 GCCATCCCCTTTCTTAAAGGTTAAATGATGGTAAAAAAAAATATCTCCTATTAAAATAAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14651 GCCATCCCCTTTCTTAAAGGTTAAATGATGGTAAAAAAAAATATCTCCTATTAAAATAAT 14710 Query 601 GTCTTGGCTCTTAGAATTTCTAACTTTCATTTTCATGTAAACTATTGATTATATACTCTT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14711 GTCTTGGCTCTTAGAATTTCTAACTTTCATTTTCATGTAAACTATTGATTATATACTCTT 14770 Query 661 TAATAATTTAGTACCACTTGGTAACTGGTGTGCTAAATTATAGATGATGCGTGTGCTAAA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14771 TAATAATTTAGTACCACTTGGTAACTGGTGTGCTAAATTATAGATGATGCGTGTGCTAAA 14830 Query 721 TTATAGATGATGGTTGACGCACCAAAAATAACTAAATTTTAACTACTTTTTATGTAATGA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14831 TTATAGATGATGGTTGACGCACCAAAAATAACTAAATTTTAACTACTTTTTATGTAATGA 14890 Query 781 TTTTCTAGCTAGTATTGATATTGCTCATATATATGCTTACTATTTTTCAATGAGTTTGTT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14891 TTTTCTAGCTAGTATTGATATTGCTCATATATATGCTTACTATTTTTCAATGAGTTTGTT 14950 Query 841 CTTTTAGTAGGTTTTAAAAACATGTCTTTGTTTGTAATTTTTGGATTTTAACTTCCAATA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14951 CTTTTAGTAGGTTTTAAAAACATGTCTTTGTTTGTAATTTTTGGATTTTAACTTCCAATA 15010 Query 901 ATGATATATTTAAATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15011 ATGATATATTTAAATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGTT 15070 Query 961 TAAGTAAGATTCAAATTATTTTTTTAGTTTTTCTTAAACTTTGTATCA 1008 |||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 15071 TAAGTAAGATTCAAATTATTTTTT-AG-TTTTCTTAAACTTTGTATCA 15116 >SL2.50ch01 No definition line found Length=98543444 Score = 106 bits (57), Expect = 8e-21 Identities = 113/140 (81%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 163 TATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAAT 222 |||| ||||||||||||||||||||||||||| ||||||| ||| | || ||||||||| Sbjct 86302444 TATCTAGATGTATCTGACTTGAAATCTGGTATGAAATTAT--TAATTTATGATATAAAAT 86302387 Query 223 ATAAGTCTTTCAAACTATAATAGAACT-AGTGAATATGATAAGAATATTCATGTAATTAT 281 |||| | ||||||||| ||| ||| | | | |||||||| |||||| |||| ||| Sbjct 86302386 ATAATTATTTCAAACTGTAAAAGATTTTAATAAATATGATTTAAATATTTGTGTA-TTAG 86302328 Query 282 ATAGTTTCTCCTAATATAAA 301 |||||| |||||| || || Sbjct 86302327 ATAGTTCATCCTAAAATTAA 86302308 Score = 73.1 bits (39), Expect = 8e-11 Identities = 90/113 (80%), Gaps = 9/113 (8%) Strand=Plus/Minus Query 902 TGATATATTTAA-ATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGTT 960 |||||||||||| | |||| |||||||| || ||| |||||||| ||||| ||| || Sbjct 11647901 TGATATATTTAAGACCACAAGATTAAAGGGCAATTTTATATATTTGACATAAATTTAATT 11647842 Query 961 TA-AGTA-A-GATTCAAATTATTTTTTTAGTTTTTCTTAAACTTTGTATCAAA 1010 || | | | ||| ||| || |||||||| ||||||||||||| |||||||| Sbjct 11647841 TAGATCACATGAT-CAA-TT-TTTTTTTA--TTTTCTTAAACTTCGTATCAAA 11647794 >SL2.50ch12 No definition line found Length=67145203 Score = 102 bits (55), Expect = 1e-19 Identities = 123/155 (79%), Gaps = 7/155 (5%) Strand=Plus/Plus Query 144 TCTAAGTGAATAAAA-CATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTAT 202 ||| ||| ||||||| ||| |||| || |||||| ||||||||||| ||| ||||||| Sbjct 38232066 TCT-AGT-AATAAAAGCATATATCTAGGCGTATCTTGCTTGAAATCTGATATAAAATTAT 38232123 Query 203 ATTAAATCATAATATAAAATATAAGTCTTTCAAACTATAA-TAGAACTAGTGAATATGAT 261 | || | || |||| |||||||| | ||| ||||||||| | || |||| ||||| || Sbjct 38232124 A--AATTAATGATAT-AAATATAATTATTTTAAACTATAAGGAAAATTAGTAAATATAAT 38232180 Query 262 AAGAATATTCATGTAATTATATAGTTTCTCCTAAT 296 | || |||| ||||| || ||||||||||||||| Sbjct 38232181 AGGATTATTTGTGTAACTAGATAGTTTCTCCTAAT 38232215 Score = 80.5 bits (43), Expect = 5e-13 Identities = 103/132 (78%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 171 TGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTCT 230 ||||||| |||||||||||||||| ||||||| ||| | || |||||||||||| | | Sbjct 64880250 TGTATCTCACTTGAAATCTGGTATGAAATTAT--TAACTAATTGTATAAAATATAA-TAT 64880194 Query 231 TTCAAACTATAATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTTCT 290 || || ||||| | || || | |||| || |||||| |||||||| |||||||| Sbjct 64880193 TTTTAATTATAAAAAAATTAATAAATACAGTAGAAATATTTGTGTAATTAATTAGTTTCT 64880134 Query 291 CCTA-ATATAAA 301 |||| |||| || Sbjct 64880133 CCTATATATTAA 64880122 Score = 75.0 bits (40), Expect = 2e-11 Identities = 112/145 (77%), Gaps = 12/145 (8%) Strand=Plus/Plus Query 865 TCTTTGTTTGTAATTTTTGGATTTTAACTTCCAATAATGATATATTTAAATG--ACAATA 922 ||||| ||||||| ||| ||||||| |||| | | |||||||||||| || |||| | Sbjct 9710800 TCTTTTTTTGTAACATTTTAATTTTAATTTCCCA-AGTGATATATTTAA-TGCCACAAGA 9710857 Query 923 TTAAAGGACA-TTTTGATATATTTTACATATCTTTCGTTTAAGT--A-A-GATTCAAATT 977 |||||| ||| ||||| ||||||| ||||| |||| |||| | | | |||||||| Sbjct 9710858 TTAAAGTACAGTTTTG-TATATTTCACATAACTTTAATTTAGGACCACAAGATTCAAAAG 9710916 Query 978 ATTTTTTTAGTTTTTCTTAAACTTT 1002 || |||| |||| |||||||||| Sbjct 9710917 TCTTCTTTA-TTTT-CTTAAACTTT 9710939 Score = 73.1 bits (39), Expect = 8e-11 Identities = 95/122 (78%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 160 ATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAA 219 ||||||| || ||||| ||||| ||||| | ||||||| || |||||| | || |||| Sbjct 3904635 ATGTATCTAGGTGTATTTGACTAGAAATTTAGTATCAA-TT-TATTAATTAATGCGATAA 3904578 Query 220 AATATAAGTCTTTCAAACTATAA-TAGAACTAGTGAATATGATAAGAATATTCATGTAAT 278 ||||| | ||| ||||||||| | || |||| ||||| | | |||||||||||||| Sbjct 3904577 TATATATTTATTTTAAACTATAAGAAAAATTAGTAAATATAGTCA-AATATTCATGTAAT 3904519 Query 279 TA 280 || Sbjct 3904518 TA 3904517 >SL2.50ch03 No definition line found Length=70787664 Score = 95.3 bits (51), Expect = 2e-17 Identities = 129/166 (78%), Gaps = 7/166 (4%) Strand=Plus/Minus Query 132 AAATAATATGTATCTAAGTGAATAAA-ACATGTATCCAGATGTATCTGACTTGAAATCTG 190 ||| || ||||||| |||| |||| ||||||| | ||| |||||| ||| |||||| | Sbjct 8249489 AAACAACATGTATCATAGTG--TAAACACATGTACCTAGACGTATCTAACTAGAAATCGG 8249432 Query 191 GTATCAAATTATATTAAATCATAATATAAAATATAAGTCTTTCAAACTATA-ATAGAACT 249 |||| | |||||| | |||||| |||||||||| |||||||||||| | | || | Sbjct 8249431 GTAT-GTCCT-TATTAATTAGTAATAT-AAATATAAGTATTTCAAACTATAGAGAAAATT 8249375 Query 250 AGTGAATATGATAAGAATATTCATGTAATTATATAGTTTCTCCTAA 295 ||| ||||||||| ||| || || ||||| |||||||||| ||| Sbjct 8249374 AGTAAATATGATAGAAATGTTTGTGAAATTAGATAGTTTCTCTTAA 8249329 Score = 84.2 bits (45), Expect = 4e-14 Identities = 103/129 (80%), Gaps = 11/129 (9%) Strand=Plus/Plus Query 875 TAATTTTTGGATTTTAACTTCCAATAATGATATATTTAA-ATGACAATATTAAAGGACAT 933 |||||||| ||||||| || | || |||| |||| ||| ||||||| ||||| | || Sbjct 65579227 TAATTTTTAAATTTTAATTTTCTAT-ATGACATATATAAGATGACAA-ATTAATATAAAT 65579284 Query 934 TTTGATATATTTTACATATCTTTCGTTTAAG-T-A--AGATTCAAATTATTTT-TTTAGT 988 |||||||||||||| |||||||| ||||||| | | | ||||||| ||||| |||| | Sbjct 65579285 TTTGATATATTTTATATATCTTTAGTTTAAGATTATTAAATTCAAAA-ATTTTCTTTA-T 65579342 Query 989 TTTTCTTAA 997 |||| |||| Sbjct 65579343 TTTT-TTAA 65579350 Score = 73.1 bits (39), Expect = 8e-11 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 901 ATGATATATTTAA-ATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGT 959 |||| |||||||| | |||| ||||||||||||||||||| ||| ||||||||||| || Sbjct 59258577 ATGACATATTTAAGACCACAAGATTAAAGGACATTTTGATACATTATACATATCTTTAGT 59258518 Query 960 TTAA 963 |||| Sbjct 59258517 TTAA 59258514 >SL2.50ch07 No definition line found Length=68045021 Score = 91.6 bits (49), Expect = 2e-16 Identities = 165/218 (76%), Gaps = 20/218 (9%) Strand=Plus/Minus Query 82 ATAGATAAATCTTGTTCACCTCCCTTTCTAATTCACTATAT-CGACTAGCAAAATAATAT 140 ||||| |||||| | | |||| || ||| |||| | ||| || |||||||| ||||| Sbjct 5632273 ATAGACAAATCTCGCTTGCCTCTCTCCCTATTTCAATGTATTTGA-TAGCAAAA-AATAT 5632216 Query 141 GTATCTAAGTGAATAAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATT 200 ||||||||||| |||||||| ||||| |||| |||||| | | || ||| Sbjct 5632215 GTATCTAAGTGTATAAAACACGTATCTAGATATATCTG-C-------C----AT-AAA-A 5632170 Query 201 ATATTAAATCATAATATAAAATATAAGTCTTTCAAACTATAA-TAGAACTAGTGAATATG 259 |||||| | | ||||| ||| ||| | |||||||||||| |||| |||| |||||| Sbjct 5632169 CTATTAAGTAGTGATATAGAATGTAACTAGTTCAAACTATAAGGAGAATTAGTAAATATG 5632110 Query 260 ATAAGAATATTCATGTAATTATATAGTTTCTCCT-AAT 296 ||||||||||| |||||||| ||||| |||||| ||| Sbjct 5632109 ATAAGAATATTT-TGTAATTAGATAGTCTCTCCTTAAT 5632073 Score = 86.1 bits (46), Expect = 1e-14 Identities = 104/132 (79%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 170 ATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTC 229 ||||||||||||||||||||| ||| ||||||| | |||| || | ||||||| ||| | Sbjct 54778999 ATGTATCTGACTTGAAATCTGATATGAAATTAT-T-AAATAATGAAATAAAATGTAATTA 54779056 Query 230 TTTCAAACTATA-ATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTT 288 ||||||| |||| | | || | |||||| | | ||| || | ||||||| |||||| Sbjct 54779057 TTTCAAATTATAGACAAAATCAAAAAATATGGTCAAAATGTTTACGTAATTAGGTAGTTT 54779116 Query 289 CTCCTAATATAA 300 |||||||| ||| Sbjct 54779117 CTCCTAAT-TAA 54779127 >SL2.50ch08 No definition line found Length=65866657 Score = 87.9 bits (47), Expect = 3e-15 Identities = 109/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 155 AAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAA 214 ||||||||||||||| ||||||| |||| | |||||||| ||||||| | || | | | Sbjct 848436 AAAACATGTATCCAGGTGTATCTAACTTAACTTCTGGTATGAAATTAT-T-AATTAGTGA 848379 Query 215 TATAAAATATAAGTCTTTCAAACTATAATA-GAACTAGTGAATATGATAAGAATATTCAT 273 |||| ||| ||| | |||||||||| | | ||| ||||||||||| || |||| || Sbjct 848378 TATACAATGTAAATGTTTCAAACTACAGGAAGAATTAGTGAATATGGTAGGAATCTTTGA 848319 Query 274 GTAATTATATAGTTTCTCC 292 ||||||| |||||| ||| Sbjct 848318 GTAATTAGGTAGTTT-TCC 848301 >SL2.50ch04 No definition line found Length=66470942 Score = 87.9 bits (47), Expect = 3e-15 Identities = 85/103 (83%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 140 TGTATCTAAGTGA-ATAAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAA 198 |||| |||| ||| | ||| ||||||||| |||||||| |||||||||||||||| ||| Sbjct 1253082 TGTACCTAA-TGACAAAAAGAATGTATCCAAATGTATCTAACTTGAAATCTGGTATAAAA 1253024 Query 199 TTATATTAAATCATAATATAAAATATAAGTCTTTCAAACTATA 241 |||| ||| | | ||||||||| ||| | |||||||||||| Sbjct 1253023 TTAT--TAATTAACAATATAAAACGTAATTATTTCAAACTATA 1252983 Score = 76.8 bits (41), Expect = 6e-12 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 155 AAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAA 214 ||||||| ||| || ||||||||||||||| ||| |||| |||||||| || | || | Sbjct 1258198 AAAACATATATTTAG-TGTATCTGACTTGAATTCTAGTATAAAATTATA--AATTAATGA 1258142 Query 215 TATAAAATATAAGTCTTTCAAACTATAATA-GAACTAGTGAATATGATAAGAATATTCAT 273 ||||||| ||| | ||||||| || || | ||| |||| ||| ||||| |||||| | Sbjct 1258141 AATAAAATGTAATTATTTCAAATTACAAGAAGAATTAGTAAATTTGATAGAAATATTTGT 1258082 Query 274 GTAATTATATAGTTTCTCC 292 |||||| ||||| ||| Sbjct 1258081 ATAATTAGCCAGTTTTTCC 1258063 Score = 76.8 bits (41), Expect = 6e-12 Identities = 82/101 (81%), Gaps = 5/101 (5%) Strand=Plus/Plus Query 172 GTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTCTT 231 |||| |||| ||||||||| ||| ||| | |||||| | ||||||||||| ||| | || Sbjct 55757492 GTATTTGACGTGAAATCTGATAT-AAAAT-TATTAATTATTAATATAAAATGTAATTATT 55757549 Query 232 TCAAACTATAAT-AGAACTAGTGAATATGATAAGAATATTC 271 | ||||||| || | || |||||||||||||| || ||||| Sbjct 55757550 TTAAACTATGATGAAAATTAGTGAATATGATA-GA-TATTC 55757588 Score = 73.1 bits (39), Expect = 8e-11 Identities = 102/131 (78%), Gaps = 9/131 (7%) Strand=Plus/Minus Query 886 TTTTAACTTCCAATAATGATATATTTA-AATGACAATATTAAAGGACATTTTGATATATT 944 ||||||| || ||| | ||||||||| | | || |||||| || ||||||| ||| Sbjct 6706726 TTTTAACATCATATATTTATATATTTATGTTTAAAAGATTAAAATGCACTTTGATACATT 6706667 Query 945 TTACATATCTTTCGTTTAAG----TAAGATTCAAATTATTTTT-TTAGTTTTTCTTAAAC 999 |||||||| | | ||||||| |||||||||||| |||||| ||| ||||| ||||| Sbjct 6706666 TTACATATTTGTAGTTTAAGATTATAAGATTCAAAT-ATTTTTATTA-TTTTT-TTAAAT 6706610 Query 1000 TTTGTATCAAA 1010 ||||||| ||| Sbjct 6706609 TTTGTATTAAA 6706599 Score = 73.1 bits (39), Expect = 8e-11 Identities = 133/175 (76%), Gaps = 19/175 (11%) Strand=Plus/Plus Query 835 TTTGTTCTTTTAGTAGGTTTTAAAAA-CATG-TCTTTGTTTGTAATTTTTG-GAT-TTT- 889 ||| || ||||||| |||| ||||| ||| || || ||| | |||||| || ||| Sbjct 64539469 TTTCTT-TTTTAGTCTGTTTAAAAAAGAATGATCCTT-TTT-T--TTTTTGCAATATTTG 64539523 Query 890 AACTTCCAATAATGATATATTTAA-ATGACAATATTAAAGGACATTTTGATATATTTTAC 948 ||||| | | ||| || ||||| | | |||||||||||||||||||||| |||| || Sbjct 64539524 AACTTTAACT-TTGACATGTTTAACACCATAATATTAAAGGACATTTTGATACATTTAAC 64539582 Query 949 ATATCTTTCGTTTAAGTAAGATT-C-AAATTATTTTTTTAGTTTTTCTTAAACTT 1001 ||| |||| ||| ||| ||| | ||||||||||||| ||||||||||||| Sbjct 64539583 ATAACTTTAATTT---TAA-ATTACAAAATTATTTTTTTTC-TTTTCTTAAACTT 64539632 >SL2.50ch00 No definition line found Length=21805821 Score = 84.2 bits (45), Expect = 4e-14 Identities = 114/147 (78%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 155 AAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAA 214 ||||||| || || ||||||| |||||||||||||||| |||| |||||| | || | Sbjct 12943155 AAAACATTTACAAAGGTGTATCTCACTTGAAATCTGGTATAAAAT--TATTAACTAATTA 12943212 Query 215 TATAAAATATAAGTCTTTCAAACTATAATAGAAC-T-AGTGAATATGATAAGAATATTCA 272 |||||||||||| | || ||| ||||| | || | | | |||| || |||||| Sbjct 12943213 TATAAAATATAA-TATTATAAATTATAAAAAAAAATTAATAAATACAGTACAAATATTTG 12943271 Query 273 TGTAATTATATAGTTTCTCCTA-ATAT 298 |||||||| ||||||||||||| |||| Sbjct 12943272 TGTAATTAAATAGTTTCTCCTATATAT 12943298 Score = 75.0 bits (40), Expect = 2e-11 Identities = 94/118 (80%), Gaps = 12/118 (10%) Strand=Plus/Minus Query 901 ATGATATATTTAA-ATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGT 959 ||||||||||||| || |||| |||||| ||||||| ||||||||||||||| ||| | Sbjct 16607468 ATGATATATTTAAGATCACAAAATTAAAAGACATTTA-ATATATTTTACATATTTTTAAT 16607410 Query 960 TT-AAG-TA-A-GATTCAAATTATTTTT-TTAGTTTTTCTTAAACTT--TGTATCAAA 1010 || || || | |||||||| || ||| ||| ||||| | |||||| | ||||||| Sbjct 16607409 TTGAAACTATAAGATTCAAAA-ATCTTTCTTAATTTTT-T-AAACTTCATCTATCAAA 16607355 >SL2.50ch11 No definition line found Length=56302525 Score = 82.4 bits (44), Expect = 1e-13 Identities = 96/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 142 TATCTAAGTGAATAAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTA 201 || ||| ||| | |||||||||||| || ||||| |||||||||||||||||| |||||| Sbjct 50954551 TAGCTAGGTGTACAAAACATGTATCTAGGTGTATGTGACTTGAAATCTGGTATGAAATTA 50954610 Query 202 TATTAAATCATAATATAAAATATAAGTCTTTCAAACTATAATAGAACTAGTGAATATGAT 261 | | | | | |||||||||| || | |||||||||||| | || || | | |||||| Sbjct 50954611 T-TGAT-TAGTGATATAAAATACAATTAGTTCAAACTATAA-A-AATTAATAAGTATGAT 50954666 Query 262 A 262 | Sbjct 50954667 A 50954667 Score = 78.7 bits (42), Expect = 2e-12 Identities = 122/160 (76%), Gaps = 8/160 (5%) Strand=Plus/Minus Query 139 ATGTATCTAAGT-GAAT-AAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCA 196 |||||| | ||| | || ||||||| |||| | |||| ||||||| ||| || ||| | Sbjct 53556811 ATGTATAT-AGTAGTATAAAAACATATATCTAAGTGTA--TGACTTGCAATTTGTTAT-A 53556756 Query 197 AATTATATTAAATCATAATATAAAATATAAGTCTTTCAAACTATAATAGAACTAGTGAA- 255 |||| |||||| | || |||||| || ||| | ||||||||||| ||||| | | || Sbjct 53556755 AATT-TATTAATTAATGATATAATATGTAAATATTTCAAACTATTGGAGAACCAATAAAA 53556697 Query 256 TATGATAAGAATATTCATGTAATTATATAGTTTCTCCTAA 295 || |||| |||||| || |||||| || |||||||||| Sbjct 53556696 TACGATAGAAATATTTATATAATTAGATGATTTCTCCTAA 53556657 Score = 75.0 bits (40), Expect = 2e-11 Identities = 81/99 (82%), Gaps = 9/99 (9%) Strand=Plus/Minus Query 906 ATATTTAA-ATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGTTTAA- 963 |||||||| ||||| | ||||||||| |||||||||||||||| |||||||| |||||| Sbjct 886358 ATATTTAAGATGACTAGATTAAAGGATATTTTGATATATTTTATATATCTTTAGTTTAAA 886299 Query 964 -GTA--AGATTCAAATTATTTTTTTAGT-TTTTCTTAAA 998 || ||||| |||| || | ||| | |||||||||| Sbjct 886298 ACTACGAGATT--AATT-TTGTATTATTATTTTCTTAAA 886263 Score = 75.0 bits (40), Expect = 2e-11 Identities = 107/139 (77%), Gaps = 6/139 (4%) Strand=Plus/Minus Query 174 ATCTGACTTGAAATCTGGTATCAAATTATATTAAATCATAATATAAAATATAAGTCTTTC 233 |||||||||||| ||| ||| ||| |||||| | || | ||||||| ||| | |||| Sbjct 52914705 ATCTGACTTGAAGTCTAATAT-AAA--ATATTATTTAATGAGATAAAATCTAATTATTTC 52914649 Query 234 AAACTA-TAATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTT-CTC 291 || ||| || |||| || | ||||||||| ||||||||| |||||| |||||| ||| Sbjct 52914648 AATCTACTAGGAGAATTAATAAATATGATAGAAATATTCATATAATTAGGTAGTTTTCTC 52914589 Query 292 CTAATATAAA-ATTTAATA 309 || || ||| || ||||| Sbjct 52914588 CTTATTTAATGATATAATA 52914570 Score = 73.1 bits (39), Expect = 8e-11 Identities = 85/106 (80%), Gaps = 7/106 (7%) Strand=Plus/Plus Query 906 ATATTTAAATGACAATATTAAAGGACATTTTGATATATTTTACATATCTTTCGTTTAAG- 964 || ||||||| | |||||||||||| ||||||| ||||||||| || ||| ||||||| Sbjct 51924433 ATGTTTAAATAAAAATATTAAAGGAAATTTTGAGATATTTTACTGATATTTAGTTTAAGA 51924492 Query 965 T---AAGATTCAAATTATTT-TTTTAGTTTTTCTTAAACTTTGTAT 1006 | |||||||||| ||| ||||| ||||| | ||| ||||||| Sbjct 51924493 TCGCAAGATTCAAAAGTTTTCTTTTACTTTTT-T-AAATTTTGTAT 51924536 >SL2.50ch10 No definition line found Length=65527505 Score = 80.5 bits (43), Expect = 5e-13 Identities = 108/139 (78%), Gaps = 6/139 (4%) Strand=Plus/Minus Query 158 ACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTATATTAAA-TCATAATA 216 ||||||||| || ||||| ||| ||||| ||| ||| ||| | ||||||| | | || | Sbjct 55875275 ACATGTATCTAGGTGTATGTGATTTGAATTCTAATAT-AAAAT-TATTAAATTAAGAAAA 55875218 Query 217 TAAAATATAAGTCTTTCAAACTATAATAGA-AC-TAGTGAATATGATAAGAATATTCATG 274 |||||||||| | ||||||| ||||| ||| | || | ||||||||| |||||| || Sbjct 55875217 TAAAATATAATTATTTCAAATTATAA-AGACAATTAATAAATATGATAGAAATATTTATA 55875159 Query 275 TAATTATATAGTTTCTCCT 293 |||||| ||| || |||| Sbjct 55875158 TAATTAAGTAGCTTTTCCT 55875140 >SL2.50ch06 No definition line found Length=49751636 Score = 76.8 bits (41), Expect = 6e-12 Identities = 98/125 (78%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 171 TGTATCTGACTTGAAATCTGGTATCAAATTATATTAAATCA-TAATATAAAATATAAGTC 229 ||||||||||||||||||| ||| ||| |||| ||| | ||||||||||||||| Sbjct 432669 TGTATCTGACTTGAAATCTAGTA--AAA-AGTATT-AATAAGTAATATAAAATATAATAA 432614 Query 230 TTTCAAACTATAATAGAACTAGTGAATATGATAAGAATATTCATGTAATTATATAGTTTC 289 || ||| ||||| | || || | |||| ||||| |||||| |||||||| || |||| Sbjct 432613 TTATAAAATATAAAA-AATTAATAAATACGATAATAATATTTGTGTAATTACGTAATTTC 432555 Query 290 TCCTA 294 ||||| Sbjct 432554 TCCTA 432550 Score = 75.0 bits (40), Expect = 2e-11 Identities = 124/164 (76%), Gaps = 7/164 (4%) Strand=Plus/Minus Query 142 TATCTAAGTGAATAAAACATGTATCCAGATGTATCTGACTTGAAATCTGGTATCAAATTA 201 ||||||| | | ||||||||||| || ||| ||| | |||||| ||||||| ||||| Sbjct 31953491 TATCTAA-TAACAAAAACATGTATACAAGTGTCTCTAATTTGAAACCTGGTATGGAATTA 31953433 Query 202 TATTAAATCATAATATAAAATATAAGTCTTTCAA---ACTATAA-TAGAACTAGTGAATA 257 | | | | || | ||||||| | | | |||||| ||||||| |||| || | |||| Sbjct 31953432 T--TGATTAATGAGATAAAATGTTATTGTTTCAACAAACTATAAGAAGAAATAATAAATA 31953375 Query 258 TGATAAGAATATTCATGTAATTATATAGTTTCTCCTAATATAAA 301 ||||| |||||| |||||||| ||||||||||||| || || Sbjct 31953374 TGATAGAAATATTTGTGTAATTAGGTAGTTTCTCCTAAAATTAA 31953331 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 809112678048 Database: Tomato genome chromosomes (build SL2.50) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 823,944,041 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5