BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 4.0) 34,075 sequences; 44,419,890 total letters Query= Sn32103 Length=1299 Score E Sequences producing significant alignments: (Bits) Value Solyc07g043710.4.1 974 0.0 Solyc07g026890.1.1 207 1e-52 >Solyc07g043710.4.1 Length=1329 Score = 974 bits (527), Expect = 0.0 Identities = 1074/1335 (80%), Gaps = 81/1335 (6%) Strand=Plus/Plus Query 9 ATCAAGGATTCTATCCATCTCCAAAAGGATAATAAAGCCCTCTTCTCCTACCCCTTCTTC 68 |||| | ||| |||| || || | || ||||||||||||||||||| |||| ||| |||| Sbjct 30 ATCACGAATTGTATCGATGTCGAGAAAGATAATAAAGCCCTCTTCTGCTACTCCTCCTTC 89 Query 69 ACATAGACGTCACAATCTATCATTGCTAGATTGTTATGCAAATGGTGAGTATATTCCAAT 128 ||||| ||||||||||||||||||||| ||||||||||| ||| ||||||| | || Sbjct 90 ACATAAACGTCACAATCTATCATTGCTTGATTGTTATGCTAATAATGAGTATGCTTCATC 149 Query 129 GGTCTTTTTCTACCCTAAACCWACRCTCACTGCTARTAACATATCCCAACTTCTTCAAGA 188 ||| | |||||||||||||| || || || ||| ||||||||| ||||||||||| | Sbjct 150 AGTCATGTTCTACCCTAAACCAACAATCCCTTCTAATAACATATCTCAACTTCTTCAGAA 209 Query 189 ATCCCTCTCAAAAGCATTGACATATTATTATCCCTTTGCTGGGATCTTAAGAGACAATTC 248 ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| | Sbjct 210 ATCCCTCTCAAAAGCATTGACATATTACTATCCCTTTGCTGGGATGTTAAAAGACAATAC 269 Query 249 CTATGTTGATTGCAATGAYAGGGGAGCTGAGTTCTTGAATGTCCATGTCGATTGTCGCAT 308 |||||||||||||||||| ||||||||||||||||||||||| | ||||||| |||| || Sbjct 270 CTATGTTGATTGCAATGACAGGGGAGCTGAGTTCTTGAATGTTCGTGTCGATGGTCGTAT 329 Query 309 GTCCGATGTTGGCAATTC--GT--TAA--A-A--AAT-G-------T-TGTATTTCCACA 350 ||| || ||| |||||| || ||| | | | | | | |||||||||||| Sbjct 330 GTCTGACGTTATCAATTCATGTGATAATGATAGGAGTGGTAAAAATTGTGTATTTCCACA 389 Query 351 AGGGTTGGATTATGG-CA-A-TAGTAATTCTTTTGATGGTAGGTTAGTAATGGCTCAACT 407 ||| ||| || ||| | | |||| |||||||||||||||| |||| |||| ||||||| Sbjct 390 AGGATTGTGTTTTGGAAATACTAGTGATTCTTTTGATGGTAGATTAGCAATGACTCAACT 449 Query 408 GACTCATTTCGATTGTGGTGGAGTAGCAGTCAGCACTAGCATATGTCACAAGATTGYCGA 467 ||||||||||||||||||||| ||||||||||| | || | | ||||||||||| ||| Sbjct 450 TACTCATTTCGATTGTGGTGGAATAGCAGTCAGCTTTTGCTTCTCTCACAAGATTGTCGA 509 Query 468 TGGATATAGT-ATTGCCAATTTCATTAGTGATTGGGCYAGC-ATAGCTAAAGACCCGA-- 523 |||||||||| | || ||||| || ||||| ||||| || || ||||||||||||| Sbjct 510 TGGATATAGTGCTGGCAAATTT-ATGAGTGACTGGGC-TGCTATTGCTAAAGACCCGAAT 567 Query 524 -GTCATGCAAAACCATCTCCTCGATTCGATGGAGCGTCCCTMTTCCCACC---CATTCAT 579 |||||||| | ||| ||||| |||||||||||| ||| | |||||||| |||||| Sbjct 568 CATCATGCAATAACATATCCTCAATTCGATGGAGCCTCCTTTTTCCCACCTGGTATTCAT 627 Query 580 AATRCTAGTTCAACCACAGCAGGGGTGAACAACTTACCACTCCAAGGAC-A--AAAACAT 636 || || | |||| ||| |||||||| ||||||| |||||| | | |||| Sbjct 628 GATGCT-G-----GCACATCAGAGGTGAACAGCTTACCAGAGGAAGGACTAGTACAACAA 681 Query 637 C--AT-GTKACTAGAAGGTACCTTTTCCCTGCTTCAACATTGAATACTCTCAAGGCCAAA 693 | | || ||||||||||| |||||| ||||||||| |||||| ||||||||||| ||| Sbjct 682 CGTTTCGTGACTAGAAGGTATCTTTTCTCTGCTTCAAAATTGAACACTCTCAAGGCAAAA 741 Query 694 ATTGGTGATGCAGAATCAGGAATATTACAAAATYCTACMAAAGTTGAAAGTGTATCTGCA 753 |||| |||| ||| |||||||||| || |||| ||| | ||||||||||||||||| Sbjct 742 ATTGTTGATTCAGGATCAGGAATAGTAGGAAATCCTAGCAGGATTGAAAGTGTATCTGCA 801 Query 754 CTCMTTTACAAATGTGCTGCAGMAGSTGCAAGRAGGAAGGCYATGAATYGTATATCTGGC 813 || |||||||| | ||| || ||||| | | | ||| || | | Sbjct 802 CTTCTTTACAAA-----T-CAGCAGCTGCAA--A--TA-G----GAA---TA-A--T--- 837 Query 814 GATTCATCATTCCGACCATCAACATTCACGCTATTTGCAAACATGCGTCCACCATTGCCC 873 | ||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct 838 -A--CATCATTTCGACCATCAACGTTCACACTATTTGCAAACATGCGTCCACCATTACCT 894 Query 874 CTCAACACTATCGGAAATGCTCCAGGTTATATTTCCACATCAATAGAAGAGGAAGTAGAT 933 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 895 CTCAACACTATTGGAAATGCTCCCGGTTATATTTCCACATCAATAGAAGAGGAAGTAGAT 954 Query 934 ATGCAGCTACCTAG-ATTGATTGCGGATCTAAGGAAAGGGAAAGAAAAACTCCGCAACAG 992 ||||||||||| || || | |||| || |||||||||||||||||||||||||| ||||| Sbjct 955 ATGCAGCTACCAAGGATCG-TTGCTGAACTAAGGAAAGGGAAAGAAAAACTCCGGAACAG 1013 Query 993 ATTCAATACTGTCGATCCTAATAAATTGGTSTATGAATCATTTGAATTAATGAAAGAAGC 1052 ||||||||| || |||||||| |||||||| | |||||||||||||||||||||||||| Sbjct 1014 ATTCAATACCGTTGATCCTAACAAATTGGTGTTTGAATCATTTGAATTAATGAAAGAAGT 1073 Query 1053 GCAACRAGTRTTTAACAGAGAAGGTTTTGATACGTATAGATGTASTAGTTTATGCAATTT 1112 | || ||| | |||||||||||||||||||| |||||||| | ||||||||||| || Sbjct 1074 GGGACAAGTATATAACAGAGAAGGTTTTGATATCTATAGATGCAGCAGTTTATGCAACTT 1133 Query 1113 CCCTTTCTATAAAATAGACTTTGGATGGGGTAGACCACATAGAGTGAGCRTGTTAAGTCC 1172 ||| |||||| ||||| ||||||||||||| ||||| ||||| | | |||| ||| Sbjct 1134 CCCCTTCTATGGCATAGATTTTGGATGGGGTACGCCACAAAGAGTCGCCTTTTTAATTCC 1193 Query 1173 TCCGTTTAACTTCGTTGTTCTGATGGATAATCAAAA------T---GGAGTGGAAGCACA 1223 ||| | |||||| |||||||| ||||||||||||| | ||||||||||| | Sbjct 1194 TCCCTGCAACTTCTTTGTTCTGTTGGATAATCAAAACCGCGATGGAGGAGTGGAAGCGCT 1253 Query 1224 AGTGACATTAGAAGAAAGTGATATGACTTTCTTCCAAGAAGACAAAGAACTCCTTGACTT 1283 ||||| |||||||||||||| |||||| |||||||| ||||| || || ||||| | || Sbjct 1254 TGTGACGTTAGAAGAAAGTGAAATGACTGTCTTCCAACAAGACCAACAAATCCTTCAGTT 1313 Query 1284 TGCTGGCCTTATATA 1298 |||| ||| ||||| Sbjct 1314 TGCTCGCCCAATATA 1328 >Solyc07g026890.1.1 Length=330 Score = 207 bits (112), Expect = 1e-52 Identities = 203/248 (82%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 329 TAAAAAATGTTGTATTTCCACAAGGGTTGGATTATGGCAATAGTA---ATTCTTTTGATG 385 |||||| || ||||||| ||||||| ||| ||| ||| ||||||| |||||||||||| Sbjct 63 TAAAAATTG-TGTATTTTCACAAGGATTGTATTTTGGAAATAGTAGTGATTCTTTTGATG 121 Query 386 GTAGGTTAGTAATGGCTCAACTGACTCATTTCGATTGTGGTGGAGTAGCAGTCAGCACTA 445 |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||| | | Sbjct 122 GTAGATTAGCAATGATTCAACTTACTCATTTCGATTGTGGTGGAATAGCGGTCAACTTTT 181 Query 446 GCATATGTCACAAGATTGYCGATGGATATAGTATTGCCAATTTCATTAGTGATTGGGCYA 505 || | | ||||||||||| ||||||||||||| || ||| || || ||||| ||||| Sbjct 182 GCTTCTCTCACAAGATTGTCGATGGATATAGTGCTGGCAAATTTATGAGTGACTGGGCT- 240 Query 506 GC-ATAGCTAAAGACCCGAGTCATGCAAAACCATCTCCTCGATTCGATGGAGCGTCCCTM 564 || || ||||||||| | |||||||| ||||| |||||||||||||||||| ||| | Sbjct 241 GCTATTTCTAAAGACCTTAATCATGCAATACCATATCCTCGATTCGATGGAGCATCCTTT 300 Query 565 TTCCCACC 572 |||||||| Sbjct 301 TTCCCACC 308 Lambda K H 1.35 0.626 1.14 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55418705620 Database: Tomato Genome cDNA (ITAG release 4.0) Posted date: Mar 21, 2024 4:18 PM Number of letters in database: 44,419,890 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5