BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Tomato Genome proteins (ITAG release 4.0)
           34,075 sequences; 11,664,535 total letters



Query= SlCOQ9-B

Length=309
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc07g042150.3.1unnamed protein product                             639     0.0  


>Solyc07g042150.3.1 unnamed protein product
Length=310

 Score = 639 bits (1649),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 309/309 (100%), Positives = 309/309 (100%), Gaps = 0/309 (0%)

Query  1    MYRSAAKRLLPAFYRRRQDAVSCIRTLAADYPTRFMTSAATGNIPDQNPIPVNPILPSSN  60
            MYRSAAKRLLPAFYRRRQDAVSCIRTLAADYPTRFMTSAATGNIPDQNPIPVNPILPSSN
Sbjct  1    MYRSAAKRLLPAFYRRRQDAVSCIRTLAADYPTRFMTSAATGNIPDQNPIPVNPILPSSN  60

Query  61   PTDSTASSSWKEEERTRFQDTDAKSSSRTKRPKAHYKDEEALVLSASLSHVIRLGWTETA  120
            PTDSTASSSWKEEERTRFQDTDAKSSSRTKRPKAHYKDEEALVLSASLSHVIRLGWTETA
Sbjct  61   PTDSTASSSWKEEERTRFQDTDAKSSSRTKRPKAHYKDEEALVLSASLSHVIRLGWTETA  120

Query  121  MIAGARDVGVSPSIVGSFPRKEAALVEYFMDECLERLIDIIESRNDLNNLIPSERIAKLV  180
            MIAGARDVGVSPSIVGSFPRKEAALVEYFMDECLERLIDIIESRNDLNNLIPSERIAKLV
Sbjct  121  MIAGARDVGVSPSIVGSFPRKEAALVEYFMDECLERLIDIIESRNDLNNLIPSERIAKLV  180

Query  181  RIRLEMQTPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDDANEIDWYVKRTV  240
            RIRLEMQTPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDDANEIDWYVKRTV
Sbjct  181  RIRLEMQTPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDDANEIDWYVKRTV  240

Query  241  LGGIYSTTELYMLTDSSPDFRDTWAFLDARTKDAFDLKKTAQEAQRLAEAVGAGMGGSVQ  300
            LGGIYSTTELYMLTDSSPDFRDTWAFLDARTKDAFDLKKTAQEAQRLAEAVGAGMGGSVQ
Sbjct  241  LGGIYSTTELYMLTDSSPDFRDTWAFLDARTKDAFDLKKTAQEAQRLAEAVGAGMGGSVQ  300

Query  301  GFMKRVFTG  309
            GFMKRVFTG
Sbjct  301  GFMKRVFTG  309



Lambda      K        H        a         alpha
   0.317    0.131    0.383    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1756614035


  Database: Tomato Genome proteins (ITAG release 4.0)
    Posted date:  Mar 21, 2024  4:18 PM
  Number of letters in database: 11,664,535
  Number of sequences in database:  34,075



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40