BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Solyc01g089960.2 Length=5575 Score E Sequences producing significant alignments: (Bits) Value Solyc01g089960.2WRKY transcription factor 12 SlWRKY12 904 0.0 Solyc04g051540.2WRKY transcription factor 13 SlWRKY13 130 1e-28 Solyc05g015850.2WRKY transcription factor 75 SlWRKY75 95.3 5e-18 Solyc09g014990.2WRKY transcription factor 33 SlWRKY33 87.9 8e-16 Solyc08g081630.1WRKY transcription factor 56 SlWRKY56 84.2 1e-14 Solyc07g056280.2WRKY transcription factor 30 SlWRKY30 75.0 6e-12 Solyc05g055750.2WRKY transcription factor 34 SlWRKY34 73.1 2e-11 Solyc02g088340.2WRKY transcription factor 3 SlWRKY3 73.1 2e-11 Solyc12g011200.1WRKY transcription factor 28 SlWRKY28 71.3 8e-11 >Solyc01g089960.2 WRKY transcription factor 12 SlWRKY12 Length=1161 Score = 904 bits (489), Expect = 0.0 Identities = 489/489 (100%), Gaps = 0/489 (0%) Strand=Plus/Plus Query 1 AATCATTCTACTTGAAAATGAAACCCCCACACGGAGTACGAATACATGCAATTCACAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AATCATTCTACTTGAAAATGAAACCCCCACACGGAGTACGAATACATGCAATTCACAAAA 60 Query 61 TACATCCGATCCCTCAATAATTAATTCACCATCAACAACAACAACAAGTAATTGTTCAAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TACATCCGATCCCTCAATAATTAATTCACCATCAACAACAACAACAAGTAATTGTTCAAA 120 Query 121 AGAAGAAAAAGTAGTTTGGAATATTAGAAGAAGAAAAAAAAAGTGAGAGGAATTAATGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGAAGAAAAAGTAGTTTGGAATATTAGAAGAAGAAAAAAAAAGTGAGAGGAATTAATGGA 180 Query 181 AAGGGGCAGTGAAGAAAGAAATCAGTTAAACAATTATAATTTACAAATATCCTCAGCCGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAGGGGCAGTGAAGAAAGAAATCAGTTAAACAATTATAATTTACAAATATCCTCAGCCGC 240 Query 241 AGCAGCAACAAATAATATTCATCATGAATTGGGATTTATACACTTTGCAGATCATAACAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AGCAGCAACAAATAATATTCATCATGAATTGGGATTTATACACTTTGCAGATCATAACAA 300 Query 301 CTTAACCTTCTTACCTCCTTCGTCACAATCTTCTCACTCTCTTCAAGCTGCCGCCGCCGC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTTAACCTTCTTACCTCCTTCGTCACAATCTTCTCACTCTCTTCAAGCTGCCGCCGCCGC 360 Query 361 CAGCGTAAGTGTTACGCCATCTGCCGCCGTCAATACAAACGCTGCTGCTGCTGCTGGTGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CAGCGTAAGTGTTACGCCATCTGCCGCCGTCAATACAAACGCTGCTGCTGCTGCTGGTGC 420 Query 421 TGGTGGTCTAGGGTTTAGTCACAGTCAATTACTTGTGAATAGACCTTCTTGGAACAACAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGGTGGTCTAGGGTTTAGTCACAGTCAATTACTTGTGAATAGACCTTCTTGGAACAACAA 480 Query 481 CGAACAGGT 489 ||||||||| Sbjct 481 CGAACAGGT 489 Score = 815 bits (441), Expect = 0.0 Identities = 441/441 (100%), Gaps = 0/441 (0%) Strand=Plus/Plus Query 5135 CAGGAGTTACTATCGATGTACGCATAGTAATTGTAGAGTGAAAAAGAGAGTTGAAAGATT 5194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CAGGAGTTACTATCGATGTACGCATAGTAATTGTAGAGTGAAAAAGAGAGTTGAAAGATT 780 Query 5195 ATCAGAAGATTGTCGTATGGTAATAACTACTTATGAAGGTAGACATAACCATTCTCCTTG 5254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 ATCAGAAGATTGTCGTATGGTAATAACTACTTATGAAGGTAGACATAACCATTCTCCTTG 840 Query 5255 TGATGATTCTAACTCTTCTGATCATGATTGTTTCACCTCGTTCTAATATTATTATTATTA 5314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TGATGATTCTAACTCTTCTGATCATGATTGTTTCACCTCGTTCTAATATTATTATTATTA 900 Query 5315 TTCTGTATATAAGTAGTACCTAGCTACGTACCCCTATATATTATTATTATTATATTATAT 5374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TTCTGTATATAAGTAGTACCTAGCTACGTACCCCTATATATTATTATTATTATATTATAT 960 Query 5375 AGTTTTTATAAGGAACAGCAACAACAATGTCACAACGAATCATATACTATATATTTTGTG 5434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AGTTTTTATAAGGAACAGCAACAACAATGTCACAACGAATCATATACTATATATTTTGTG 1020 Query 5435 TCTACCTTCATGTTGTTATGGTGGATAAATTTACTATTCGTTATGTTAGAGGTTTTTTTT 5494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 TCTACCTTCATGTTGTTATGGTGGATAAATTTACTATTCGTTATGTTAGAGGTTTTTTTT 1080 Query 5495 TTCCTTATTATGTATGGCTAGCTATAGCTCGATGTAGTCAAGACCATGATTTAAATTTAT 5554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 TTCCTTATTATGTATGGCTAGCTATAGCTCGATGTAGTCAAGACCATGATTTAAATTTAT 1140 Query 5555 ATTGATAAATAGTGGACATTT 5575 ||||||||||||||||||||| Sbjct 1141 ATTGATAAATAGTGGACATTT 1161 Score = 303 bits (164), Expect = 7e-81 Identities = 164/164 (100%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 1628 GGTGGAAGAGTTCATCTTCAGACAAAGGAAAAGTGAAGATAAGAAGAAAGCTAAGAGAAC 1687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 561 GGTGGAAGAGTTCATCTTCAGACAAAGGAAAAGTGAAGATAAGAAGAAAGCTAAGAGAAC 620 Query 1688 CAAGATTTTGTTTCCAAACAAGGAGTGACATTGATGTTCTTGATGATGGATATAAATGGA 1747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 CAAGATTTTGTTTCCAAACAAGGAGTGACATTGATGTTCTTGATGATGGATATAAATGGA 680 Query 1748 GAAAATATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCCAGG 1791 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 681 GAAAATATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCCAGG 724 Score = 145 bits (78), Expect = 5e-33 Identities = 78/78 (100%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 603 AGGTGGAAACACTAGATCCCAAGGGTATTAATGACGAAAATTGCAGCGGTAATGCCAGTG 662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 AGGTGGAAACACTAGATCCCAAGGGTATTAATGACGAAAATTGCAGCGGTAATGCCAGTG 545 Query 663 AGGGTAACAATTCATGGT 680 |||||||||||||||||| Sbjct 546 AGGGTAACAATTCATGGT 563 >Solyc04g051540.2 WRKY transcription factor 13 SlWRKY13 Length=849 Score = 130 bits (70), Expect = 1e-28 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1668 AAGAAGAAAGCTAAGAGAACCAAGATTTTGTTTCCAAACAAGGAGTGACATTGATGTTCT 1727 ||||||||| ||||||||||||||||||||||| |||| | |||||| | ||||| | Sbjct 555 AAGAAGAAAAGTAAGAGAACCAAGATTTTGTTTCAAAACTATGAGTGATGTGGATGTGTT 614 Query 1728 TGATGATGGATATAAATGGAGAAAATATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCC 1787 |||||||| |||||||||||||||||||| || ||||||||||| |||| || ||||| Sbjct 615 GGATGATGGTTATAAATGGAGAAAATATGGACAAAAAGTTGTCAAAAATACCCAACATCC 674 Query 1788 CAGG 1791 |||| Sbjct 675 CAGG 678 Score = 78.7 bits (42), Expect = 5e-13 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 5135 CAGGAGTTACTATCGATGTACGCATAG-TAATTGTAGAGTGAAAAAGAGAGTTGAAAGAT 5193 |||||| || ||||||||||| || || |||||||||||| || || | || ||||||| Sbjct 675 CAGGAGCTATTATCGATGTACACA-AGATAATTGTAGAGTTAAGAAACGTGTGGAAAGAT 733 Query 5194 TATCAGAAGATTGTCGTATGGTAATAACTACTTATGAAGGTAGACATAACCATTCTCC 5251 || |||||||| | ||||| || || || || |||||||||||| |||||||| Sbjct 734 TAGCAGAAGATCCAAGAATGGTGATTACAACATACGAAGGTAGACATGTTCATTCTCC 791 >Solyc05g015850.2 WRKY transcription factor 75 SlWRKY75 Length=802 Score = 95.3 bits (51), Expect = 5e-18 Identities = 88/106 (83%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 1667 TAAGAAGAAAGCTAAGAGAACCAAGATTTTGTTTCCAAACAAGGAGTGACATTGATGTTC 1726 ||||||||| ||||| ||||||||| | ||| |||||||||||| | ||||| ||| Sbjct 297 TAAGAAGAAGATTAAGA-AACCAAGATATGCTTTTCAAACAAGGAGTCAAGTTGATATTC 355 Query 1727 TTGATGATGGATATAAATGGAGAAAATATGGTCAGAAAGTTGTCAA 1772 |||||||||| |||| |||||| |||||||| || |||| |||||| Sbjct 356 TTGATGATGGTTATAGATGGAGGAAATATGGACAAAAAGCTGTCAA 401 >Solyc09g014990.2 WRKY transcription factor 33 SlWRKY33 Length=1761 Score = 87.9 bits (47), Expect = 8e-16 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1702 CAAACAAGGAGTGACATTGATGTTCTTGATGATGGATATAAATGGAGAAAATATGGTCAG 1761 ||||| | |||||||||||| | ||||||||||| |||| |||||||||||||||||| Sbjct 1057 CAAACCACAAGTGACATTGATATACTTGATGATGGTTATAGATGGAGAAAATATGGTCAA 1116 Query 1762 AAAGTTGTCAA 1772 ||||||||||| Sbjct 1117 AAAGTTGTCAA 1127 >Solyc08g081630.1 WRKY transcription factor 56 SlWRKY56 Length=696 Score = 84.2 bits (45), Expect = 1e-14 Identities = 71/83 (86%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 1698 TTTCCAAACAAGGAGTGACA-TTGATGTTCTTGATGATGGATATAAATGGAGAAAATATG 1756 ||| || |||||||| ||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 427 TTT-CATACAAGGAG-CACAGAGGATATTCTTGATGATGGATTTAAATGGAGAAAATATG 484 Query 1757 GTCAGAAAGTTGTCAAGAATAGC 1779 |||| |||| |||||| |||||| Sbjct 485 GTCAAAAAGCTGTCAAAAATAGC 507 >Solyc07g056280.2 WRKY transcription factor 30 SlWRKY30 Length=1252 Score = 75.0 bits (40), Expect = 6e-12 Identities = 90/114 (79%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 1671 AAGAAAGCTAAGAGAACCAAGATTTTG-TTTCCAAACAAGGAGTGACATTGATGTTCTTG 1729 |||||| | || |||||||||||| ||| | ||| |||||| |||||| ||||| Sbjct 760 AAGAAA-CAAAAGGAACCAAGATTTGCATTTATGACCAA-GAGTGAGATTGATAATCTTG 817 Query 1730 ATGATGGATATAAATGGAGAAAATATGGTCAGAAAGTTGTCAAGAATAG-CCTT 1782 | ||||| |||| ||||||||||||||||||||| | || ||||| || |||| Sbjct 818 AAGATGGCTATAGATGGAGAAAATATGGTCAGAAGGCAGTGAAGAACAGTCCTT 871 >Solyc05g055750.2 WRKY transcription factor 34 SlWRKY34 Length=1808 Score = 73.1 bits (39), Expect = 2e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1710 GAGTGACATTGATGTTCTTGATGATGGATATAAATGGAGAAAATATGGTCAGAAAGTTGT 1769 |||||| |||||| ||||||| ||||| ||| |||||||||||||| ||||||||||| Sbjct 1045 GAGTGAAATTGATATTCTTGAAGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGTTGT 1104 Query 1770 CAA 1772 ||| Sbjct 1105 CAA 1107 >Solyc02g088340.2 WRKY transcription factor 3 SlWRKY3 Length=1734 Score = 73.1 bits (39), Expect = 2e-11 Identities = 76/93 (82%), Gaps = 6/93 (6%) Strand=Plus/Plus Query 1684 GAA-CCAAGATTTTGTT-TCCAAACAAGGAGTGACATTGATGTTCTT-GATGATGGATAT 1740 ||| |||||| ||||| | || || || ||||| ||||| ||||| |||||||||||| Sbjct 1173 GAATCCAAGA--TTGTTCTGCAGACGAGAAGTGAAGTTGAT-TTCTTAGATGATGGATAT 1229 Query 1741 AAATGGAGAAAATATGGTCAGAAAGTTGTCAAG 1773 |||||| |||||||||| ||||| || || ||| Sbjct 1230 AAATGGCGAAAATATGGGCAGAAGGTGGTAAAG 1262 >Solyc12g011200.1 WRKY transcription factor 28 SlWRKY28 Length=1008 Score = 71.3 bits (38), Expect = 8e-11 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1671 AAGAAAGCTAAGAGAACCAAGATTTTGTTTCCAAACAAGGAGTGACATTGATGTTCTTGA 1730 || |||| ||| ||||||||||||| ||| |||| |||||| |||||| |||||| Sbjct 510 AAAAAAGATAAAAGAACCAAGATTTGCCTTCATGACAAAGAGTGAGATTGATAATCTTGA 569 Query 1731 TGATGGATATAAATGGAGAAAATATGGTCAGAAAGTTGTCAAGAATAGCC 1780 ||||| ||| ||||||||||||||| || || | || ||||| |||| Sbjct 570 AGATGGTTATCGATGGAGAAAATATGGACAAAAGGCAGTGAAGAACAGCC 619 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 227712073164 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5