BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (Build SL4.0) 13 sequences; 782,520,033 total letters Query= Untitled_sequence Length=979 Score E Sequences producing significant alignments: (Bits) Value SL4.0ch11 1757 0.0 SL4.0ch01 1127 0.0 SL4.0ch10 880 0.0 SL4.0ch06 193 5e-47 SL4.0ch08 154 2e-35 >SL4.0ch11 Length=54379777 Score = 1757 bits (951), Expect = 0.0 Identities = 974/984 (99%), Gaps = 6/984 (1%) Strand=Plus/Plus Query 2 AAC-TAAATTGCGAGCAAAGAGCAGTTGGAATCATAAAAACCATAAATGAGCTTAGGAAA 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201148 AACATAAATTGCGAGCAAAGAGCAGTTGGAATCATAAAAACCATAAATGAGCTTAGGAAA 10201207 Query 61 AAAGTCTAGGAAGCTAAGATTCAAATGGTGAACTGAAATAAAATAGATAACTCTTTCTCT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201208 AAAGTCTAGGAAGCTAAGATTCAAATGGTGAACTGAAATAAAATAGATAACTCTTTCTCT 10201267 Query 121 CAACCTATCTTGTGTTGTTTGTCATTCTTGTATTGGCACATCGATGTGAGATTTGTCATT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201268 CAACCTATCTTGTGTTGTTTGTCATTCTTGTATTGGCACATCGATGTGAGATTTGTCATT 10201327 Query 181 AGAAGGAAGATTTAGTAGTGGTTGCTGGCAGATTTTCAGAATGCCAGGAAATAATCGCAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201328 AGAAGGAAGATTTAGTAGTGGTTGCTGGCAGATTTTCAGAATGCCAGGAAATAATCGCAT 10201387 Query 241 TCATTGAGAAATAACTACAATGTCTAGCTACTCCGATCAATTGTGTTAAAATAAAAGTAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201388 TCATTGAGAAATAACTACAATGTCTAGCTACTCCGATCAATTGTGTTAAAATAAAAGTAA 10201447 Query 301 AAATAACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTTATTCCAATCAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201448 AAATAACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTTATTCCAATCAAAA 10201507 Query 361 TTAATAGCAACCATAAAAATGAAGCTAAACAAGGGAAAACGTTTGCTAGATCGAGAGAAA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201508 TTAATAGCAACCATAAAAATGAAGCTAAACAAGGGAAAACGTTTGCTAGATCGAGAGAAA 10201567 Query 421 GCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAAATTAAGAAATCGAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201568 GCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAAATTAAGAAATCGAG 10201627 Query 481 CCCATTTTTTTATCGACATTAAATATGGACTGGTAAGATATTTATCTGTTTGTGTTTAGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201628 CCCATTTTTTTATCGACATTAAATATGGACTGGTAAGATATTTATCTGTTTGTGTTTAGC 10201687 Query 541 CCATTTTTTACTCCAACATCCACCCAAACATCTCCTACAAAAAAGGTGTTGTGGTCTTTT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201688 CCATTTTTTACTCCAACATCCACCCAAACATCTCCTACAAAAAAGGTGTTGTGGTCTTTT 10201747 Query 601 TATACAATTTTTGCCATTAGCTATTCTTCCATAGATACTTTATGTTTAGTTGTTTCCATA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201748 TATACAATTTTTGCCATTAGCTATTCTTCCATAGATACTTTATGTTTAGTTGTTTCCATA 10201807 Query 661 ATTGATGATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAGTAAAAAGGTTAGTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201808 ATTGATGATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAGTAAAAAGGTTAGTT 10201867 Query 721 AACTCATCTACTTTATTGAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAAGTT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201868 AACTCATCTACTTTATTGAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAAGTT 10201927 Query 781 CAATCTAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTAAGG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201928 CAATCTAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTAAGG 10201987 Query 841 AGTTGAATAAATAATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAATCAG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10201988 AGTTGAATAAATAATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAATCAG 10202047 Query 901 TAAGCTGAAACTAGCGAAAGCCA-GGGGT-GGGGTGGGGAATTC-AATTCCCTTAGGCC- 956 |||||||||||||||||||| || ||||| |||||||||||||| |||||||||||| | Sbjct 10202048 TAAGCTGAAACTAGCGAAAGTCAAGGGGTGGGGGTGGGGAATTCAAATTCCCTTAGGTCG 10202107 Query 957 ACTTCCTGATCTGGAAA-TCCACT 979 |||||||||||||| || || ||| Sbjct 10202108 ACTTCCTGATCTGGTAAGTCGACT 10202131 Score = 734 bits (397), Expect = 0.0 Identities = 551/626 (88%), Gaps = 8/626 (1%) Strand=Plus/Plus Query 289 AAATAAAAGTAAAAAT-AACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTT 347 |||| ||| | ||||| ||||||| | ||||||||||||||||| |||||||||| ||| Sbjct 21206769 AAATCAAAATCAAAATAAACAGAATCCAGAAAGGAAATAAAGGGGCAGCACCTACATCTT 21206828 Query 348 ATTCCAATCAAAATTAATAGCAACCATAAAAATGAAGCT-AAACAAGGGAAAACGTTTGC 406 ||| |||||||||| |||| | | |||||||||||||| || | ||| ||| ||||| Sbjct 21206829 ATTGCAATCAAAATCAATACCGAGAATAAAAATGAAGCTCGAAAATGGG-AAATTTTTGC 21206887 Query 407 TAGATCGAGAGAAAGCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAA 466 |||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||| || Sbjct 21206888 TAGATCAAGATAAAGCATTTTATCTAGATTTGTATGAAATAAACACAACAACAATATTAA 21206947 Query 467 ATTAAGAAATCGAGCCCATTTTTTTATCGACATTAAATATGGACTGGTAAGATATTTATC 526 |||| ||||| ||||||||||||||||||| |||||||||||||| | | |||||||| Sbjct 21206948 CTTAAAAAATCAAGCCCATTTTTTTATCGACGTTAAATATGGACTGATCAAATATTTATG 21207007 Query 527 TGTTTGTGTTTAGCCCATTTTTTACTCCAACATCCACCCAAACATCTCCTACAAAAAAGG 586 | ||||| ||||||| ||||||||||| || | | |||||||||||| || ||||| Sbjct 21207008 TATTTGTATTTAGCCTATTTTTTACTC--AC--CAAACCAAACATCTCCCGCAGAAAAGT 21207063 Query 587 TGTTGTGGTCTTTTTATACAATTTTTGCCATTAGCTATTCTTCCATAGATACTTTATGTT 646 |||| | |||||||||||||| || || |||||| |||||||||||| ||||||| |||| Sbjct 21207064 TGTTTTAGTCTTTTTATACAACTTATGTCATTAGTTATTCTTCCATACATACTTTGTGTT 21207123 Query 647 TAGTTGTTTCCATAATTGATGATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAG 706 |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 21207124 TAGTTGGTTCCATAATTGATGATATAACAAAGCAAGGAGAGGATATTTTATTTCATCAAG 21207183 Query 707 TAAAAAGGTTAGTTAACTCATCTACTTTATTGAAAACAAGGAAGAAAATATTTTCTCATC 766 |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct 21207184 TAAAAAGGTTAGTTAACTCATCTA-TCTATTGAAAACATTGAAGAAAATATTTTCTCATC 21207242 Query 767 TTTGGTAGTAAGTTCAATCTAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAA 826 | || |||||||||| |||||||||||||||| |||||||||||||||||||| |||||| Sbjct 21207243 TGTGCTAGTAAGTTCGATCTAGTTCTTGAGTTAGATTTTGTTTATGAGAAAGTAGAGAAA 21207302 Query 827 TGAAGATTTTAAGGAGTTGAATAAATAATGTGACCTTGTGAAATTCGGATATATATGTAT 886 ||| |||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 21207303 TGATGATTTTTAGGAGTTTAATAAATAATGTGACCTTGTGAAATTAGGATATATATGTAT 21207362 Query 887 TGCTGCCTAATCAGTAAGCTGAAACT 912 ||||||| |||||||||| ||||||| Sbjct 21207363 TGCTGCCCAATCAGTAAGTTGAAACT 21207388 Score = 100 bits (54), Expect = 3e-19 Identities = 79/91 (87%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 80 TTCAAATGGTGAACTGAAA-TAAAATAGATAACTCTTTCTCTCAACCTATCTTGTGTTGT 138 ||||||| ||||| ||||| ||||| || || ||||||||||||||||||||| ||||| Sbjct 5704763 TTCAAATAGTGAATTGAAAATAAAACAGGTAGCTCTTTCTCTCAACCTATCTTCCGTTGT 5704704 Query 139 TTGTCATTCTTGTATTGGCACATCGATGTGA 169 |||||||| ||||| | ||||||||||||| Sbjct 5704703 TTGTCATTTATGTATAGACACATCGATGTGA 5704673 Score = 97.1 bits (52), Expect = 4e-18 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 109 AACTCTTTCTCTCAACCTATCTTGTGTTGTTTGTCATTCTTGTATTGGCACATCGATGTG 168 |||||||| ||||||||||||||| ||||||||| |||| ||||| | ||| |||||||| Sbjct 21206644 AACTCTTTATCTCAACCTATCTTGCGTTGTTTGTTATTCCTGTATCGACACGTCGATGTG 21206703 Query 169 AGATTTGTCATTAGAAGGAAGATTT 193 | |||||| |||| |||||||||| Sbjct 21206704 AACTTTGTCGTTAGGAGGAAGATTT 21206728 >SL4.0ch01 Length=90863682 Score = 1127 bits (610), Expect = 0.0 Identities = 815/915 (89%), Gaps = 9/915 (1%) Strand=Plus/Minus Query 2 AAC-TAAATTGCGAGCAAAGAGCAGTTGGAA-TCATAAAAACCATAAATGAGCTTAGGAA 59 ||| |||| ||| ||||| ||||| |||||| |||||||| ||||||||| |||||||| Sbjct 66788999 AACGTAAACTGCCAGCAAGGAGCAATTGGAAAGCATAAAAAACATAAATGAACTTAGGAA 66788940 Query 60 AAAAGTCTAGGAAGCTAAGATTCAAATGGTGAACTGAAA-TAAAATAGATAACTCTTTCT 118 || |||| |||||| ||| |||||||| |||||||||| |||||| ||||||||||||| Sbjct 66788939 AAGAGTCCAGGAAGTAAAGGTTCAAATGTTGAACTGAAAATAAAATGGATAACTCTTTCT 66788880 Query 119 CTCAACCTATCTTGTGTTGTTTGTCATTCTTGTATTGGCACATCGATGTGAGATTTGTCA 178 |||||||||||||||||||||||||||| ||||| | ||||||||||||| ||| ||| Sbjct 66788879 ATCAACCTATCTTGTGTTGTTTGTCATTCCTGTATAGACACATCGATGTGAACTTTTTCA 66788820 Query 179 TTAGAAGGAAGATTTAGTAGTGGTTGCTGGCAGATTTTCAGAATGCCAGGAAATAATCGC 238 |||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||| Sbjct 66788819 TTAGAAGGAAGATTTAACAGTGGTTGCTTACAGACTTTCAGAATGCCAGAAAATAATCGC 66788760 Query 239 ATTCATTGAGAAATAACTACAATGTCTAGCTACTCCGATCAATTGTGTTAAAATAAAAGT 298 || | |||||||||||||||||||||||||||||||||||| ||||||| ||| ||| | Sbjct 66788759 ATCCCTTGAGAAATAACTACAATGTCTAGCTACTCCGATCACTTGTGTTCCAATCAAAAT 66788700 Query 299 AAAAATAACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTTATTCCAATCAA 358 ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| Sbjct 66788699 CAAAATAACAGAAGCTAGAAAGGAAACAAAGGGGAAGCACCTGCAACTTATTCCAATCAA 66788640 Query 359 AATTAATAGCAACCATAAAAATGAAGCTAAACAAGGGAAAACGTTTGCTAGATCGAGAGA 418 ||| |||| | || |||||||||||||| || ||||| ||| |||||||||||||||| | Sbjct 66788639 AATCAATACCGACAATAAAAATGAAGCTCAA-AAGGGGAAATGTTTGCTAGATCGAGATA 66788581 Query 419 AAGCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAAATTAAGAAATCG 478 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| Sbjct 66788580 AAGCATTTTATCTAGATTTGTATAAAATAAAAACAACAACAATATAAAATTAAGAAATCG 66788521 Query 479 AGCCCATTTTTTTATCGACATTAAATATGGACTGGTAAGATATTTATCTGTTTGTGTTTA 538 |||||||||| |||||| |||||||| || || |||||||||||||| ||||| |||| Sbjct 66788520 AGCCCATTTT---ATCGACGTTAAATATCGAGTGATAAGATATTTATCTTTTTGTATTTA 66788464 Query 539 GCCCATTTTTTACTCCAACATCCACCCAAACATCTCCTACAAAAAAGGTGTTGTGGTCTT 598 |||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||| Sbjct 66788463 GCCCATTTTTTACTCCAACACCCAACCAAACATCTCCGACAAAAAAGGTGTTCTGGTCTT 66788404 Query 599 TTTATACAATTTTTGCCATTAGCTATTCTTCCATAGATACTTTATGTTTAGTTGTTTCCA 658 |||||||||||| | |||||| |||||||||||| ||||||| ||||||||| ||||| Sbjct 66788403 TTTATACAATTTGTT-CATTAGTTATTCTTCCATACATACTTTGCGTTTAGTTGGTTCCA 66788345 Query 659 TAATTGAT-GATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAGTAAAAAGGTTA 717 ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 66788344 CAATTGATTGATATAACATCGCAAGGAGAGGATATTTTGTTTCATCAAGTAAAAAGGTTA 66788285 Query 718 GTTAACTCATCTACTTTATTGAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAA 777 ||||||||||||||| |||||||||||| |||||||| ||| |||||| ||| ||||||| Sbjct 66788284 GTTAACTCATCTACTCTATTGAAAACAATGAAGAAAACATTATCTCATGTTTTGTAGTAA 66788225 Query 778 GTTCAATCTAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTA 837 ||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||| Sbjct 66788224 GTTCAATCTAGTTCTTGAGTTGGATATTGTTTATGAGAGAGTAGAGAAGTGAAGATTTTT 66788165 Query 838 AGGAGTTGAATAAATAATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAAT 897 | ||||||||||||||||||||| |||| ||| |||||||||||||||| |||| ||| Sbjct 66788164 ACGAGTTGAATAAATAATGTGACTATGTGTCATTAGGATATATATGTATTGATGCCGAAT 66788105 Query 898 CAGTAAGCTGAAACT 912 ||||| | ||||||| Sbjct 66788104 CAGTATGTTGAAACT 66788090 Score = 1068 bits (578), Expect = 0.0 Identities = 804/915 (88%), Gaps = 8/915 (1%) Strand=Plus/Minus Query 2 AAC-TAAATTGCGAGCAAAGAGCAGTTGGAA-TCATAAAAACCATAAATGAGCTTAGGAA 59 ||| |||| ||| ||||| ||||| ||||| |||||||| ||||||||| |||||||| Sbjct 66858191 AACATAAACTGCTAGCAAGGAGCAAATGGAAAGCATAAAAAACATAAATGAACTTAGGAA 66858132 Query 60 AAAAGTCTAGGAAGCTAAGATTCAAATGGTGAACTGAAA-TAAAATAGATAACTCTTTCT 118 || |||| |||||| |||| |||||||| |||||||||| |||| ||||||||| ||||| Sbjct 66858131 AAGAGTCCAGGAAGTTAAGGTTCAAATGCTGAACTGAAAATAAAGTAGATAACTGTTTCT 66858072 Query 119 CTCAACCTATCTTGTGTTGTTTGTCATTCTTGTATTGGCACATCGATGTGAGATTTGTCA 178 ||||||||||||||||||||||||||||| ||||| | |||||||| |||| ||||||| Sbjct 66858071 CTCAACCTATCTTGTGTTGTTTGTCATTCCTGTATAGACACATCGACGTGAACTTTGTCA 66858012 Query 179 TTAGAAGGAAGATTTAGTAGTGGTTGCTGGCAGATTTTCAGAATGCCAGGAAATAATCGC 238 ||||||||||||||||| ||| |||||| |||| ||||||||| |||| |||||||||| Sbjct 66858011 TTAGAAGGAAGATTTAGCAGTTATTGCTGACAGACTTTCAGAATTCCAGAAAATAATCGC 66857952 Query 239 ATTCATTGAGAAATAACTACAATGTCTAGCTACTCCGATCAATTGTGTTAAAATAAAAGT 298 || | |||||||||||||| ||||||||||||||||||||||||||||| ||| ||| | Sbjct 66857951 ATCCCTTGAGAAATAACTAAAATGTCTAGCTACTCCGATCAATTGTGTTCCAATCAAAAT 66857892 Query 299 AAAAATAACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTTATTCCAATCAA 358 |||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||||| Sbjct 66857891 CAAAACAACAGAAGCTAGAAAGCAAATAAAGGGGAAGCACCTGCAACTTATTCCAATCAA 66857832 Query 359 AATTAATAGCAACCATAAAAATGAAGCTAAACAAGGGAAAACGTTTGCTAGATCGAGAGA 418 ||| |||| | || |||||||||||||| || ||||| || |||||||| ||||||| | Sbjct 66857831 AATCAATACCGACAATAAAAATGAAGCTCAA-AAGGGGGAATGTTTGCTACATCGAGATA 66857773 Query 419 AAGCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAAATTAAGAAATCG 478 || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 66857772 AAATTTTTTATCTAAATTTGTATAAAATAAACACAACAACAATATAAAATTAAGAAATCG 66857713 Query 479 AGCCCATTTTTTTATCGACATTAAATATGGACTGGTAAGATATTTATCTGTTTGTGTTTA 538 ||||||||||| |||||| ||||||||||| || |||||||||||||| ||||| |||| Sbjct 66857712 AGCCCATTTTT--ATCGACGTTAAATATGGAGTGATAAGATATTTATCTTTTTGTATTTA 66857655 Query 539 GCCCATTTTTTACTCCAACATCCACCCAAACATCTCCTACAAAAAA-GGTGTTGTGGTCT 597 |||||||||||||||||||| ||| | |||||||||| |||||||| |||||| |||||| Sbjct 66857654 GCCCATTTTTTACTCCAACACCCAACAAAACATCTCCCACAAAAAAAGGTGTTCTGGTCT 66857595 Query 598 TTTTATACAATTTTTGCCATTAGCTATTCTTCCATAGATACTTTATGTTTAGTTGTTTCC 657 ||||||||||||| | ||||| |||| ||||||| | ||||| |||||||||| |||| Sbjct 66857594 TTTTATACAATTTGTT-CATTATTTATTATTCCATACACACTTTTTGTTTAGTTGGTTCC 66857536 Query 658 ATAATTGATGATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAGTAAAAAGGTTA 717 | |||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||| Sbjct 66857535 ACAATTGATGATATAACATCACAAAGAGAGAATATTTTGTTTCATCAAGTAAAAAGGTTA 66857476 Query 718 GTTAACTCATCTACTTTATTGAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAA 777 ||||||||| ||||| |||| ||||| | ||||||||||||||||||| | | |||||| Sbjct 66857475 GTTAACTCAGCTACTCTATTTAAAACGATGAAGAAAATATTTTCTCATGTGTTATAGTAA 66857416 Query 778 GTTCAATCTAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTA 837 ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||| Sbjct 66857415 GTTCAATCTAGTTCTTGAGTTGGATATTGTTTATGAGAGAGTAGAGAAATGAAGAGTTTT 66857356 Query 838 AGGAGTTGAATAAATAATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAAT 897 | ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 66857355 ACGAGTTGAATAAATAATGTGACTTTGTAAAATTAGGATATATATGTATTGCTGCCGAAT 66857296 Query 898 CAGTAAGCTGAAACT 912 ||||||| || |||| Sbjct 66857295 CAGTAAGTTGTAACT 66857281 >SL4.0ch10 Length=64792705 Score = 880 bits (476), Expect = 0.0 Identities = 768/905 (85%), Gaps = 35/905 (4%) Strand=Plus/Plus Query 24 AGTTGG-AATCATAAAAACCATAAATGAGCTTAGGAAAAAAGTCTAGGAAGCTAAGATTC 82 |||||| || |||||||| ||||||||||||||||||||||||| | ||||||||| ||| Sbjct 33590216 AGTTGGAAAGCATAAAAAACATAAATGAGCTTAGGAAAAAAGTCAAAGAAGCTAAGGTTC 33590275 Query 83 AAATGGTGAACTG-AAATAAAATAGATAACTCTTTCTCTCAACCTATCTTGTGTTGTTTG 141 ||||||||||||| |||||||| | | || | |||||||||||||||||||||||||| Sbjct 33590276 AAATGGTGAACTGAAAATAAAACAAACAATTATTTCTCTCAACCTATCTTGTGTTGTTCT 33590335 Query 142 TCATTCTTGTATTGGCACATCGATGTGAGATTTGTCATTAGAAGGAAGATTTAGTAGTGG 201 |||||| ||||| | |||||| |||||| ||||||| |||||||||||||||| ||| Sbjct 33590336 TCATTCATGTATAGACACATCTATGTGAATTTTGTCAATAGAAGGAAGATTTAGCGGTGA 33590395 Query 202 TTGCTGGCAGATTTTCAGAATGCCAGGAAATAATCGCATTCATTGAGAAATAACTACAAT 261 |||||| || | ||| ||||| ||| |||||||||||| | ||||||||||||||||| Sbjct 33590396 TTGCTGACACACTTTTAGAATTTCAGAAAATAATCGCATCCCTTGAGAAATAACTACAAC 33590455 Query 262 GTCTAGCTACTCCGATCAATTGTG-T----T-AAAAT----A--AAAGT-AAAAATAACA 308 |||||| |||||||| ||||||| | | ||||| | ||| | |||||||||| Sbjct 33590456 GTCTAGGTACTCCGA--AATTGTGTTCCAATCAAAATCAAAATCAAAATAAAAAATAACA 33590513 Query 309 GAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTTATTCCAATCAAAATTAATAGC 368 ||||||||||||||||||||||| |||||| | ||| |||||||||| ||||| |||||| Sbjct 33590514 GAAGCTAGAAAGGAAATAAAGGGGAAGCACTTGCAATTTATTCCAATAAAAATCAATAGC 33590573 Query 369 AACCATAAAAATGAAGCT-AAACAAGGGAAAACGTTTGCTAGATCGAGAGAAAGCATTTT 427 || |||||||||||||| || | ||| ||| ||| ||||||||||| |||||||||| Sbjct 33590574 GACAATAAAAATGAAGCTTGAAAATGGG-AAATATTTTCTAGATCGAGATAAAGCATTTT 33590632 Query 428 ATCTAGATTTGTATATAATAGACACAACAACAATATAAAATTAAGAAATCGAGCCCATTT 487 ||||||||||||||| |||| ||||||||||||||||||||||| |||| |||||| Sbjct 33590633 ATCTAGATTTGTATAAAATAAACACAACAACAATATAAAATTAAAAAATTGAGCCC---- 33590688 Query 488 TTTTATCGACATTAAATATGGACTGGTAAGATATTTATCTGTTTGTGTTTAGCCCATTTT 547 ||||||| | |||||||||||||| ||| ||||||||| |||||| ||||||||||||| Sbjct 33590689 TTTTATCAATGTTAAATATGGACTGATAATATATTTATCCGTTTGTATTTAGCCCATTTT 33590748 Query 548 TTACTCCAACATCCACCCAAACATCTCCTACAAAAAAGGTGTTGTGGTCTTTTTATACAA 607 |||||||||| ||| |||||||||||| |||||||| | || || ||||||||||||| Sbjct 33590749 ATACTCCAACACCCAACCAAACATCTCCCACAAAAAATGCCTTCTGATCTTTTTATACAA 33590808 Query 608 TTTTTGCCATTAGCTATTCTTCCATAGATA-CTTTATGTTTAGTTGTTTCCATAATTGAT 666 ||| || |||||| ||||||||| || ||| ||| ||||| |||| || |||||||||| Sbjct 33590809 TTTGTGTCATTAGTTATTCTTCCTTACATATTTTTGTGTTTGGTTGGTTGCATAATTGAT 33590868 Query 667 GATATAACAAAGCAAGGAGAGGATATTTTGTTTCTTCAAGTAAAAAGGTTAGTTAACTCA 726 ||| |||||||||||||||| ||||| | | | ||| ||||||||||||||||||||| Sbjct 33590869 GATTTAACAAAGCAAGGAGATGATATAATAATACATCATGTAAAAAGGTTAGTTAACTCA 33590928 Query 727 TCTACTTTATTGAAAACAA-GGAAGAAAATATTTTCTCATCTTTGGTAGTAAGTTCAATC 785 |||||| ||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct 33590929 TCTACTCTATTGAAAAAAATGAAAAAAAATATTTTCTCATCTTTGGTAGTAAGTTCAATC 33590988 Query 786 TAGTTCTTGAGTTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTAAGGAGTTG 845 |||||||||||||| ||||||||||||| ||| || ||| | ||| |||||||| Sbjct 33590989 TAGTTCTTGAGTTGAATTTTGTTTATGACAAA-TGAAGA--TC----TTT--AGGAGTTG 33591039 Query 846 AATAAATAATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAATCAGTAAGC 905 |||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct 33591040 AATAAATAATAATACCTTGTGAAATTCAGATATATATGTATTGCTTCCCAATCAGTAAGC 33591099 Query 906 TGAAA 910 | ||| Sbjct 33591100 T-AAA 33591103 >SL4.0ch06 Length=47258699 Score = 193 bits (104), Expect = 5e-47 Identities = 197/238 (83%), Gaps = 21/238 (9%) Strand=Plus/Plus Query 681 AGGAGAGGATA-TTTTGTT-TCT-TCAAGTAAAAAGGTTAGTTAACTCATCTACTTTATT 737 ||||||||||| |||| || ||| ||||||||||||||||||||| ||||||||| ||| Sbjct 2706433 AGGAGAGGATATTTTTTTTCTCTATCAAGTAAAAAGGTTAGTTAATTCATCTACTCTATC 2706492 Query 738 GAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAAGTTCAATCTAGTTCTTGAGT 797 ||| | | | | |||| | | | |||| ||||||||||||||||| |||| ||| Sbjct 2706493 GAAGAATATG-ACAAAA-A-----T-A--TTTGATAGTAAGTTCAATCTAGATCTTAAGT 2706542 Query 798 TGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTAAGGA---GTTGAATAAATAA 854 | |||||||||||||||||||| || |||||||| |||| || | ||||||||||||| Sbjct 2706543 TAGATTTTGTTTATGAGAAAGTAGAAAAATGAAGGTTTTTAGAATCCGTTGAATAAATAA 2706602 Query 855 TGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAATCAGTAAGCTGAAACT 912 ||||| ||||||||||||||||||||||| | || || |||||||||||||||||| Sbjct 2706603 TGTGATCTTGTGAAATTCGGATATATATGC-T-GC--CC-AATCAGTAAGCTGAAACT 2706655 Score = 189 bits (102), Expect = 7e-46 Identities = 197/239 (82%), Gaps = 22/239 (9%) Strand=Plus/Plus Query 681 AGGAGAG-GATATTTTGTTTCT---TCAAGTAAAAAGGTTAGTTAACTCATCTACTTTAT 736 ||||||| || |||| ||||| ||||||||||||||||||||||||||||||| ||| Sbjct 2746813 AGGAGAGAGAATTTTTTTTTCTCCATCAAGTAAAAAGGTTAGTTAACTCATCTACTCTAT 2746872 Query 737 TGAAAACAAGGAAGAAAATATTTTCTCATCTTTGGTAGTAAGTTCAATCTAGTTCTTGAG 796 |||| | | | | |||| | | | |||||||||||||| |||||| |||| || Sbjct 2746873 TGAAGAATATG-ACAAAA-A-----T-A--TTTGGTAGTAAGTTACATCTAGATCTTAAG 2746922 Query 797 TTGGATTTTGTTTATGAGAAAGTGGAGAAATGAAGATTTTAAGGA---GTTGAATAAATA 853 ||||||||||||||||||||||| || ||||||||||||| || | |||||||||||| Sbjct 2746923 TTGGATTTTGTTTATGAGAAAGTAGAAAAATGAAGATTTTTAGAATCCGTTGAATAAATA 2746982 Query 854 ATGTGACCTTGTGAAATTCGGATATATATGTATTGCTGCCTAATCAGTAAGCTGAAACT 912 |||||||||||||||||||| ||| ||||| | ||| | |||||||||||||||||| Sbjct 2746983 ATGTGACCTTGTGAAATTCGAATACATATGC-T-GCT-C--AATCAGTAAGCTGAAACT 2747036 >SL4.0ch08 Length=63995357 Score = 154 bits (83), Expect = 2e-35 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 288 AAAATAAAAGTAAAAATAACAGAAGCTAGAAAGGAAATAAAGGGAAAGCACCTACAACTT 347 |||| ||||| | ||| | | |||||| ||| ||||||| | |||| ||| ||||| Sbjct 9244329 AAAAAAAAAGAAGAAA-AGCTGAAGCTTGAACAACAATAAAGAGGAAGC-CCTGTAACTT 9244386 Query 348 ATTCCAATCAAAATTAATAGCAACCATAAAAATGAAGC-TAAACAAGGGAAAACGTTTGC 406 |||||||||||||| |||| |||| |||| |||||||| ||| ||| | ||| |||||| Sbjct 9244387 ATTCCAATCAAAATCAATACCAACAATAACAATGAAGCCCAAAAAAGAG-AAATGTTTGC 9244445 Query 407 TAGATCGAGAGAAAGCATTTTATCTAGATTTGTATATAATAGACACAACAACAATATAAA 466 |||||| | | || |||||||||||||||||||| |||| ||||||||||| |||||| Sbjct 9244446 TAGATCAAAATGGAGAATTTTATCTAGATTTGTATAAAATAAACACAACAACATTATAAA 9244505 Query 467 ATTAAGAAATCGA 479 |||| |||||||| Sbjct 9244506 ATTAGGAAATCGA 9244518 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 743393673200 Database: Tomato genome chromosomes (Build SL4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 782,520,033 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5