BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1416 Score E Sequences producing significant alignments: (Bits) Value Solyc06g076350.3.1 1740 0.0 Solyc06g005680.4.1 231 7e-60 >Solyc06g076350.3.1 Length=1086 Score = 1740 bits (942), Expect = 0.0 Identities = 942/942 (100%), Gaps = 0/942 (0%) Strand=Plus/Minus Query 61 CTTATCATTAGAAGCAACAGGATGATAGTAACCAAAATTATTTCCAGACCAATCCCGCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1059 CTTATCATTAGAAGCAACAGGATGATAGTAACCAAAATTATTTCCAGACCAATCCCGCTG 1000 Query 121 TTGCACCACATTATAGTGATGATGAAACCCAAGTGGCGGTCCACCCCCGTAACCAACAGG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 999 TTGCACCACATTATAGTGATGATGAAACCCAAGTGGCGGTCCACCCCCGTAACCAACAGG 940 Query 181 CATGCCTACATGTCCTCCATTTGGCATCCCCATCATTGGCATCGCCACCATTTGTTGTTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 939 CATGCCTACATGTCCTCCATTTGGCATCCCCATCATTGGCATCGCCACCATTTGTTGTTG 880 Query 241 GTACGGCATCAGAGTTGGCATTGCCATGTGGCCATTAGTATTGCGGAGGTGACCACTCTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 879 GTACGGCATCAGAGTTGGCATTGCCATGTGGCCATTAGTATTGCGGAGGTGACCACTCTC 820 Query 301 ACTGGACTCACGCATAATCTCTGTAGCCGGTGTGGAAGTCAACAAATGATCAGACGAAGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 819 ACTGGACTCACGCATAATCTCTGTAGCCGGTGTGGAAGTCAACAAATGATCAGACGAAGA 760 Query 361 AGGACCCTCGTTCGGCTGCATTCTCTTCGTATACAATCTGTATTTCTGTAAATGACTTGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 759 AGGACCCTCGTTCGGCTGCATTCTCTTCGTATACAATCTGTATTTCTGTAAATGACTTGC 700 Query 421 TACGTTCTCTCTCGTCAATCCTTCCACATTCATAAGCTGCATAATTGTTTTCGGCACAGC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 699 TACGTTCTCTCTCGTCAATCCTTCCACATTCATAAGCTGCATAATTGTTTTCGGCACAGC 640 Query 481 CCCTTTGATACCTAAGTGCGCCACTACTTCAATAAAGCGCTTGTGTAACTGCGGCGTCCA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 639 CCCTTTGATACCTAAGTGCGCCACTACTTCAATAAAGCGCTTGTGTAACTGCGGCGTCCA 580 Query 541 AACAAGTCTGGGCCGTTTCAGAGTCTTAGCAGACGAATCATCCGCAAAATTCTCGTTACA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 579 AACAAGTCTGGGCCGTTTCAGAGTCTTAGCAGACGAATCATCCGCAAAATTCTCGTTACA 520 Query 601 CAGAGATGAATCAGCCTCCTCAGTGCCTCCGGATTCAACCCGCCGGAGCTTCCTCGAGTC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 CAGAGATGAATCAGCCTCCTCAGTGCCTCCGGATTCAACCCGCCGGAGCTTCCTCGAGTC 460 Query 661 GGATCCCTCTCTTATCAGATCCGTTTCATCTCTTTCAGTAACAGTCTCTTCTCTACTCCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459 GGATCCCTCTCTTATCAGATCCGTTTCATCTCTTTCAGTAACAGTCTCTTCTCTACTCCT 400 Query 721 CTCATAGCTAAACGTCTTGAAATTAGAGTTATTCATCGAAGCCATATCCTGTGAGTGCCA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 399 CTCATAGCTAAACGTCTTGAAATTAGAGTTATTCATCGAAGCCATATCCTGTGAGTGCCA 340 Query 781 TCTCTGGAGAGAAGAAAACGTATTCTGCGAAGCACGATTTACATCGGTCATCGTCTTTGA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339 TCTCTGGAGAGAAGAAAACGTATTCTGCGAAGCACGATTTACATCGGTCATCGTCTTTGA 280 Query 841 CAATTCCGGCGAAATTCTGAACGCAGCAGCAAGTTCCGACGGAATCAACTGCATATTCAA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 CAATTCCGGCGAAATTCTGAACGCAGCAGCAAGTTCCGACGGAATCAACTGCATATTCAA 220 Query 901 CGGTGTGAGATCATCGACATCGGGAAGTCCAATTTCCCAGAGAAGTCTGTCATCGTTACC 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 219 CGGTGTGAGATCATCGACATCGGGAAGTCCAATTTCCCAGAGAAGTCTGTCATCGTTACC 160 Query 961 ACCGCTTGATTCATAGTCGGTCAGGCTCACTTCTTCACCCAT 1002 |||||||||||||||||||||||||||||||||||||||||| Sbjct 159 ACCGCTTGATTCATAGTCGGTCAGGCTCACTTCTTCACCCAT 118 >Solyc06g005680.4.1 Length=921 Score = 231 bits (125), Expect = 7e-60 Identities = 420/559 (75%), Gaps = 33/559 (6%) Strand=Plus/Minus Query 319 CTCTGTAGC-C-GGTGTGGAAGTCAACAAATGATCAGACGAAGAAGGACCCTCGTTCG-- 374 |||||| || | || || |||| ||||||||||||||||||||||| ||||| |||| Sbjct 680 CTCTGTGGCACAGGCGTAGAAGCGAACAAATGATCAGACGAAGAAGGTCCCTCATTCGAC 621 Query 375 ---GC-TGCATTCTCTTCGTATACAATCTGTATTTCTGTAAATGACTTGCTACGTTCTCT 430 | |||||||||||| |||||| || || |||||||||||||| || || || || Sbjct 620 AACCCTTGCATTCTCTTCAAATACAACCTATACTTCTGTAAATGACTAGCAACATTTTCC 561 Query 431 CTCGTCAATCCTTCCACATTCATAAGCTGCATAATTGTTTTCGGCACAGCCCCTTTGATA 490 ||||||| ||||||||||||||| ||||||||||| || ||||||||||| ||| || Sbjct 560 CTCGTCAGTCCTTCCACATTCATCAGCTGCATAATCGTCTTCGGCACAGCATTTTTAATC 501 Query 491 CCTAAGTGCGCCACTACTTCAATAAAGCGCTTGTGTAACTGCGGCGTCCAAACAAGTCTG 550 ||||| |||||||| || || | ||| ||||| || | ||| |||||||| || | | Sbjct 500 CCTAAATGCGCCACAACATCCACAAATCGCTTATGCAGCTGTGGCGTCCAGACTAACCGC 441 Query 551 GGCCGTTTCAGAGTCTTAGCAGACGAATCATCCGCAAAATTCTCGTTACACAGAGATGAA 610 ||||||||||| |||||||| || |||||| || ||||||| || | || | ||| Sbjct 440 GGCCGTTTCAGCGTCTTAGCTGAATTATCATCTCCACAATTCTCATTCCTCAATGCCGAA 381 Query 611 TCAGCCTCCTCAGTG-CC-TC-CGGATTCAACCCGCCGGAGCTTCCTCGAGTCGGATCCC 667 |||||||| ||||| || || | | |||| || ||| ||||||||| |||||||| Sbjct 380 TCAGCCTCTTCAGTAACCATCTCCGGGTCAAGCCTCCGTGTCTTCCTCGACTCGGATCCA 321 Query 668 TCTCTTATCAGATCCGTTTCATCTCTTTCAGTAACAGTCTCTTCTCTACTCCTCTCATAG 727 ||||| |||||||| | ||||| || | | || | || |||| || || ||| Sbjct 320 TCTCTCGTCAGATCCATCTCATCA-TT-C--T--CA-TGA-TT-TCTA-TC-TC-CATTC 273 Query 728 CTAAACGTC-TTGAAATTAGAGTTATTCATCGAAGCCATATCCTGTGAGTG-CCATCTCT 785 || | || || |||||| | || | | | || | |||| || | || ||| | | Sbjct 272 CTTC-CTTCATTAAAATTATACTTCTCCGAC-AA-C-ATAT---GTAACTGTCCAGCAC- 221 Query 786 GGAGAGAAGAAAACGTATTCTGCGAAGCACGATTTACATCGGTCATCGTCTTTGACAATT 845 | ||||| ||||||||| ||| |||||||||||| ||||| ||||||||||| | | | Sbjct 220 GTAGAGACGAAAACGTACTCTCCGAAGCACGATTCACATCCGTCATCGTCTTCGCCGGCT 161 Query 846 CCGGCGAAATTCTGAACGC 864 |||||| |||||| ||||| Sbjct 160 CCGGCGTAATTCTAAACGC 142 Score = 84.2 bits (45), Expect = 2e-15 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 73 AGCAACAGGATGATAGTAACCAAAATTATTTCCAGACCAATCCCGCTGTTGCACCACATT 132 ||||||| ||||||| ||||||| |||||||||||||| || || ||||| ||| ||| Sbjct 906 AGCAACATGATGATAAGAACCAAATTTATTTCCAGACCAGTCTCGGGGTTGCCCCATATT 847 Query 133 ATAGTGATGATGAAACCC 150 ||| |||||||||||||| Sbjct 846 ATACTGATGATGAAACCC 829 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47491146430 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5