BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=480 Score E Sequences producing significant alignments: (Bits) Value Solyc09g007010.1.1 793 0.0 Solyc09g007020.1.1 640 0.0 Solyc09g006005.1.1 472 1e-132 Solyc01g106620.2.1 82.4 2e-15 Solyc01g106640.2.1 69.4 2e-11 >Solyc09g007010.1.1 Length=480 Score = 793 bits (429), Expect = 0.0 Identities = 463/480 (96%), Gaps = 0/480 (0%) Strand=Plus/Plus Query 1 ATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCAC 60 Query 61 TCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCC 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 TCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCACAACGATGCCCGTGCC 120 Query 121 CAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTAT 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTAT 180 Query 181 GCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCC 240 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 181 GCCAACTCAAGAGCGGGTGATTGTAATTTGATTCATTCTGGTGCTGGGGAGAACCTTGCC 240 Query 241 AAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCA 300 Query 301 AGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAA 360 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 301 GACTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAATGTGTGGACATTATACTCAA 360 Query 361 GTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGG 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct 361 GTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCTCGTTGCAACAATGGGTGG 420 Query 421 TGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAA 480 |||||||||||||||||||| |||||||||||||||||| | ||| |||||||||| ||| Sbjct 421 TGGTTCATTTCTTGCAACTACGATCCTGTAGGCAACTGGGTTGGAGAACGTCCTTATTAA 480 >Solyc09g007020.1.1 Length=483 Score = 640 bits (346), Expect = 0.0 Identities = 438/483 (91%), Gaps = 3/483 (1%) Strand=Plus/Plus Query 1 ATGGGGTTGTTCAACATCTCATTGTTAC---TCACTTGTCTCATGGTATTAGCCATATTT 57 ||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct 1 ATGGGGTTGTTTAACATGTCATTGTTACTTATGACTTGTCTCATGGTATTAGCCATATTT 60 Query 58 CACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGT 117 ||||||||||| || ||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct 61 CACTCTTGTGATGCTCAAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGT 120 Query 118 GCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAAC 177 |||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | Sbjct 121 GCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGAGCACAAAGC 180 Query 178 TATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTT 237 ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct 181 TATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTT 240 Query 238 GCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGG 297 |||||||||||||||||||||||||||||||| || ||| ||||||||||||| || | | Sbjct 241 GCCAAGGGTGGTGGTGACTTCACGGGGAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAG 300 Query 298 CCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACT 357 |||| ||| ||||||| ||| || |||||||| | ||||||| ||| ||||||||||| Sbjct 301 CCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACT 360 Query 358 CAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGA 417 |||||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||| Sbjct 361 CAAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGG 420 Query 418 TGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTAC 477 |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 421 TGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGCAATTGGGTCGGACAACGTCCTTAC 480 Query 478 TAA 480 ||| Sbjct 481 TAA 483 >Solyc09g006005.1.1 Length=480 Score = 472 bits (255), Expect = 1e-132 Identities = 407/482 (84%), Gaps = 4/482 (1%) Strand=Plus/Plus Query 1 ATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCAC 60 |||||||| ||| | | | ||||||| ||| |||| ||||| ||||||||||||||||| Sbjct 1 ATGGGGTTATTCGAAAACACATTGTTTCTCTTTTGTTTCATGATATTAGCCATATTTCAC 60 Query 61 TCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCC 120 |||||||| || ||||||||||| ||||||||||||| |||||| ||| |||| |||| Sbjct 61 TCTTGTGACGCTCAAAATTCACCACAAGACTATCTTGTGGTTCACAACAATGCTCGTGGT 120 Query 121 CAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTAT 180 |||||||| || ||||||||||||||||||| ||||||| || |||||||| ||| Sbjct 121 CAAGTCGGGGTTGGGCCTATGTCTTGGGATGATGCCTTGGCAACCAAAGCACAAAGGTAT 180 Query 181 GCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCC 240 || |||||||| |||||||| |||||||||||||||||| | ||||||||||||||| Sbjct 181 GCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCC 240 Query 241 AAGGGTGGTGGTGACTTCACGGGGAGGGCAGCC-GTGCAATTGTGGGTGTCCGAGAGGCC 299 |||||| |||| || ||||| |||||| ||| || ||||||||||| | |||| ||| Sbjct 241 AAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTG-AATTGTGGGTGGCGGAGAAGCC 299 Query 300 AAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCA 359 || ||| ||||| | |||||||||||||| | |||| ||| ||| |||| |||||||| Sbjct 300 AAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCA 359 Query 360 AGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAA-CGGAT 418 |||||| ||||| | ||| || | ||||||||| ||||||| ||||| ||||| ||| | Sbjct 360 AGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTAGTCGGGCTCGTTGTAACAATCGG-T 418 Query 419 GGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 GGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACT 478 Query 479 AA 480 || Sbjct 479 AA 480 >Solyc01g106620.2.1 Length=540 Score = 82.4 bits (44), Expect = 2e-15 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 343 TGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGG-C 401 ||| |||| |||||||| || || ||||| ||||| || || || ||||||| | ||| | Sbjct 346 TGTGGACACTATACTCAGGTGGTGTGGCGTAACTCGGTACGTCTTGGTTGTGCTAGGGTC 405 Query 402 ACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGAT 461 | | ||||||||||| |||| || || |||| || |||||||| ||| ||||||| Sbjct 406 A-GGTGCAACAACGGGTGGTACTTTATAACTTGTAATTATGATCCACCAGGTAACTGGAG 464 Query 462 CGGACAACGTCC 473 ||||||||||| Sbjct 465 AGGACAACGTCC 476 >Solyc01g106640.2.1 Length=495 Score = 69.4 bits (37), Expect = 2e-11 Identities = 115/153 (75%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 330 TGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGG 389 |||||||||| | ||| ||||||||||||||||||||||| ||||| | | ||| || Sbjct 345 TGGTGGAAAAGAATGTCGACATTATACTCAAGTAGTCTGGAAAAACTCCATTCAACTTGG 404 Query 390 TTGTGGTCGGG--CACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCT 447 ||||| | | | || | || | ||| || |||||||| || | || |||||| |||| Sbjct 405 TTGTGCTAGAGTTCA-G-TGTACCAATGGCTGGTGGTTTGTTACATGTAACTATAATCCC 462 Query 448 GTAGGCAACTGGATCGGACAACGTCCTTACTAA 480 |||||| | || || ||||| || |||||| Sbjct 463 CCAGGCAATTACATTGGTCAACGCCCATACTAA 495 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15584167080 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5