BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Solyc02g094400.2.1 Length=1514 Score E Sequences producing significant alignments: (Bits) Value Solyc02g094400.4.1 2250 0.0 Solyc01g009870.3.1 113 3e-24 >Solyc02g094400.4.1 Length=1218 Score = 2250 bits (1218), Expect = 0.0 Identities = 1218/1218 (100%), Gaps = 0/1218 (0%) Strand=Plus/Plus Query 2 ATCCAATCCAATCCAATCATCCCGTTTTCTCTTCTCTTCTCTTCTTCTCATATATATAAT 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCCAATCCAATCCAATCATCCCGTTTTCTCTTCTCTTCTCTTCTTCTCATATATATAAT 60 Query 62 ATATATACTAGTAGTATATATATATATAACAATACAACAACAATGGCTCTTACAGCTGTT 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATATATACTAGTAGTATATATATATATAACAATACAACAACAATGGCTCTTACAGCTGTT 120 Query 122 CATGTTTCCGATGTTCCCAATCTAGATCAAGTCCCTGACAAAGCTCCTCTATATGCCACC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CATGTTTCCGATGTTCCCAATCTAGATCAAGTCCCTGACAAAGCTCCTCTATATGCCACC 180 Query 182 CGATTCTCTCAAGGCATTGAAATTGGAAGAGCATCCGAATTTTTAGTTGTTGGACACAGA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGATTCTCTCAAGGCATTGAAATTGGAAGAGCATCCGAATTTTTAGTTGTTGGACACAGA 240 Query 242 GGGAACGGGATGAATTTGTTGCAATCGGCTGACCGGAGAATGAATGCCCTCAAAGAAAAT 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGGAACGGGATGAATTTGTTGCAATCGGCTGACCGGAGAATGAATGCCCTCAAAGAAAAT 300 Query 302 TCCATTCTTTCTTTCAATGCAGCTGCCAATTACCCAATCGATTTTATTGAATTTGACGTT 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCCATTCTTTCTTTCAATGCAGCTGCCAATTACCCAATCGATTTTATTGAATTTGACGTT 360 Query 362 CAGGTGACAAAGGATGATTGCCCTGTTATTTTTCACGACGATTTCATCCTCACTCAACAT 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CAGGTGACAAAGGATGATTGCCCTGTTATTTTTCACGACGATTTCATCCTCACTCAACAT 420 Query 422 AATAATGGTACAGTTTATGAAAGGAGAATTACTGAATTGTCACTTGCTGAATTTCTTAGC 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AATAATGGTACAGTTTATGAAAGGAGAATTACTGAATTGTCACTTGCTGAATTTCTTAGC 480 Query 482 TATGGACCCCAAAAAGAAGAGGGTCTCACTGGAAAACCTTTAATGAGGAAAACGAAAGAT 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TATGGACCCCAAAAAGAAGAGGGTCTCACTGGAAAACCTTTAATGAGGAAAACGAAAGAT 540 Query 542 GGAAAGATTGTTAGCTGGACAGTTGAAACCGATGATTCCGCATGTACCTTAAAAGAAGCT 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GGAAAGATTGTTAGCTGGACAGTTGAAACCGATGATTCCGCATGTACCTTAAAAGAAGCT 600 Query 602 TTTGAGAAAGTGAATCCATCTATTGGTTTCAACATCGAGCTCAAATTTGATGATCACATT 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TTTGAGAAAGTGAATCCATCTATTGGTTTCAACATCGAGCTCAAATTTGATGATCACATT 660 Query 662 GTTTATCAACAGGACTACCTCATCCATGCTCTTAAAGCAGTGTTACATGTCGTATTAGAG 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GTTTATCAACAGGACTACCTCATCCATGCTCTTAAAGCAGTGTTACATGTCGTATTAGAG 720 Query 722 TATGCTAAAGGCAGACCAATCATATTCTCAAGTTTCCAGCCTGATGCTGCTCTGCTTGTC 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TATGCTAAAGGCAGACCAATCATATTCTCAAGTTTCCAGCCTGATGCTGCTCTGCTTGTC 780 Query 782 AAGAAGCTCCAGACATGTTACCCTGTGTTTTTTCTCACAAATGGAGGTACAGAGATTTAC 841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AAGAAGCTCCAGACATGTTACCCTGTGTTTTTTCTCACAAATGGAGGTACAGAGATTTAC 840 Query 842 TATGATGTTCGAAGAAACTCGTTGGAAGAGGCCACTAAACTGTGCTTAGAGGGTGGTTTG 901 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TATGATGTTCGAAGAAACTCGTTGGAAGAGGCCACTAAACTGTGCTTAGAGGGTGGTTTG 900 Query 902 GAAGGTATTGTTTCGGAGGTGAAAGGCATCTTCAGGAATCCAGGAGTAGTTAACAAGATC 961 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 GAAGGTATTGTTTCGGAGGTGAAAGGCATCTTCAGGAATCCAGGAGTAGTTAACAAGATC 960 Query 962 AAAGAGTCCAAGCTGTCTCTGCTGACATACGGCAAATTGAATAATGTGCCTGAAGCTGTG 1021 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AAAGAGTCCAAGCTGTCTCTGCTGACATACGGCAAATTGAATAATGTGCCTGAAGCTGTG 1020 Query 1022 TATATGCAACACCTGATGGGAATTGATGGAGTGATAGTGGATTTTGTTGAACAAGTAACA 1081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 TATATGCAACACCTGATGGGAATTGATGGAGTGATAGTGGATTTTGTTGAACAAGTAACA 1080 Query 1082 GATGCTGTGTGTAAGCTGGTGAAGAAGCCAGATGAGATATTGCTGGAAGGGGAGGAAAAG 1141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 GATGCTGTGTGTAAGCTGGTGAAGAAGCCAGATGAGATATTGCTGGAAGGGGAGGAAAAG 1140 Query 1142 GTTCAAAATAGACCTCAATTTTCACAGAGGGAATTGTCTTTTCTGCTCAAACTTATCCCC 1201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GTTCAAAATAGACCTCAATTTTCACAGAGGGAATTGTCTTTTCTGCTCAAACTTATCCCC 1200 Query 1202 GAACTGATACAACAATAA 1219 |||||||||||||||||| Sbjct 1201 GAACTGATACAACAATAA 1218 >Solyc01g009870.3.1 Length=1008 Score = 113 bits (61), Expect = 3e-24 Identities = 404/571 (71%), Gaps = 17/571 (3%) Strand=Plus/Plus Query 511 TGG-AAAACCTTTAATGAGGAAAACGAAAGATGGAAAGATTGTTAG-CTGGACAGTTGAA 568 ||| |||||| ||| | ||||||||||||||||||| ||| || | |||| || ||| Sbjct 278 TGGAAAAACCATTATTCAGGAAAACGAAAGATGGAAGGAT-CTTCGAATGGAAGGTCGAA 336 Query 569 ACCGATGATTCCG-CATGTACCTTAAAAGAAGCTTTTGAGAAAGTGAATCCATCTATTGG 627 ||||| || | |||||| || || | | |||||||| |||| || ||| | || Sbjct 337 GAGGATGA-TCGGTTATGTACATTGCAATATGTGTTTGAGAATGTGAGTCAGTCTGTAGG 395 Query 628 TTTCAACATCGAGCTCAAATTTGATGATCACATTGTTTATCAACAGGACTACCTCATCCA 687 |||||||| ||| | ||||||||||| | | |||| || | || | || | | Sbjct 396 GTTCAACATTGAGTTTAAATTTGATGACAAGAGAAATTATAAAGACGAAGAACTTGTTCG 455 Query 688 TGCTCTTAAAGCAGTGTTACATGTCGTATTAGA-GTATGCTAAAGGCAGACCAATCATAT 746 | | || |||||| ||||| || || || || ||| || ||||| | | ||||| | Sbjct 456 CGTTATTCAAGCAGCTTTACAGGTAGTGTT-GAGGTACGCCAAAGGTAAGCGTATCATGT 514 Query 747 TCTCAAGTTTCCAGCCTGATGCTGCTCTGCTTG-TCAAGAAGCTCCAGACATG-TTACCC 804 |||| || || || || || || |||| ||| ||| |||| || || || || || Sbjct 515 TCTCGAGCTTTCAACCAGACGCGGCTC-AATTGATCAGGAAGGAGCAAAC-TGCCTATCC 572 Query 805 TGTGTTTT-TT-CTCACAAATGGAGGTACAGAGATTTACTATGATGTTCGAAGAAACTCG 862 | ||||| || || || || ||||| | || ||||| || | |||| |||||| Sbjct 573 -G-GTTTTCTTCCTAACGAACGGAGGCTCTGAAATTTATCCGGACATCAGAAGGAACTCG 630 Query 863 TTGGAAGAGGCCACTAAACTGTGCTTAGAGGGTGGTTTGGAAGGTATTGTTTCGGAGGTG 922 || |||||||| | ||| |||||||||| || ||| | |||| || || ||||||||| Sbjct 631 TTAGAAGAGGCGATTAAGTTGTGCTTAGAAGGCGGTCTACAAGGCATCGTCTCGGAGGTG 690 Query 923 AAAGGCATCTTCAGGAATCCAGGAGTAGTTAAC-AAGATCAAAGAGTCCAAGCTGTCTCT 981 |||| ||| || || |||||| | | | || | || |||||||| ||||| || || || Sbjct 691 AAAGCCATTTTAAGAAATCCAAAAAT-GATAGCAAATATCAAAGAATCCAATCTTTCCCT 749 Query 982 GCTGACATACGGCAAATTGAATAATGTGCCTGAAGCTGTGTATATGCAACACCTGATGGG 1041 |||| || ||| || | || || | | |||| || || ||| | || ||||||| Sbjct 750 TATGACTTATGGCCAACTAAACAACGAGAAAGAAGTGGTTTACTTGCTATACATGATGGG 809 Query 1042 AATTGATGGAGTGATAGTGGATTTTGTTGAA 1072 |||||||||||||||| ||||| |||||| Sbjct 810 TGTTGATGGAGTGATAGTAGATTTCGTTGAA 840 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50837035970 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5