BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato genome chromosomes (Build SL4.0)
           13 sequences; 782,520,033 total letters



Query= Untitled_sequence

Length=114
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

SL4.0ch09                                                             211     1e-53


>SL4.0ch09 
Length=68513564

 Score = 211 bits (114),  Expect = 1e-53
 Identities = 114/114 (100%), Gaps = 0/114 (0%)
 Strand=Plus/Minus

Query  1         GTACTTCTCGTGCTTTTCCGGCTAATGTATCACCTTCAAATCCATTTGGGTCTCGTGACG  60
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  66569814  GTACTTCTCGTGCTTTTCCGGCTAATGTATCACCTTCAAATCCATTTGGGTCTCGTGACG  66569755

Query  61        ACAAACCACGTTATACAGATCCCTGGGCTAGTGACATGACTTCCGCTTCCTATG  114
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  66569754  ACAAACCACGTTATACAGATCCCTGGGCTAGTGACATGACTTCCGCTTCCTATG  66569701



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 68861733160


  Database: Tomato genome chromosomes (Build SL4.0)
    Posted date:  Mar 21, 2024  4:17 PM
  Number of letters in database: 782,520,033
  Number of sequences in database:  13



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5