BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Tomato Genome cDNA (ITAG release 2.40)
           34,725 sequences; 41,981,568 total letters



Query= Untitled_sequence

Length=926
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Solyc10g024470.1Chromobox homolog 7 (AHRD V1 *--- B0QYP2_HUMAN); ...  989     0.0  
Solyc01g081500.2heterochromatin protein 1-like protein hp1L           78.7    8e-14


>Solyc10g024470.1 Chromobox homolog 7 (AHRD V1 *--- B0QYP2_HUMAN); contains Interpro 
domain(s)  IPR000953  Chromo domain 
Length=1473

 Score = 989 bits (535),  Expect = 0.0
 Identities = 535/535 (100%), Gaps = 0/535 (0%)
 Strand=Plus/Plus

Query  81    AAAAGAGGCCTCTATGGACGAGGGAGCGATGGCAGCAAAAGAGGCATCTGCAGATAGATC  140
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  939   AAAAGAGGCCTCTATGGACGAGGGAGCGATGGCAGCAAAAGAGGCATCTGCAGATAGATC  998

Query  141   CAACAATACCTTCACAAATGGATTTTCAATGGCTGATGGAACAGAATCACTTCAATCTGG  200
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999   CAACAATACCTTCACAAATGGATTTTCAATGGCTGATGGAACAGAATCACTTCAATCTGG  1058

Query  201   TCGCTGCACAGGAGCTAAAAGGAGGAAGTCTGCTTCTGTTCGGAGGTTTATACCGCAAGC  260
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1059  TCGCTGCACAGGAGCTAAAAGGAGGAAGTCTGCTTCTGTTCGGAGGTTTATACCGCAAGC  1118

Query  261   TACTTCAGGTGTAGTGAAGGATCTCCAAGATGCTGTAGCAAATGCTACTAGTGGCCATTT  320
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1119  TACTTCAGGTGTAGTGAAGGATCTCCAAGATGCTGTAGCAAATGCTACTAGTGGCCATTT  1178

Query  321   GGTTGCATTACTGCAGGAAGAAGTTCACGATCAAGGACTTGTGGGAAATGTTTTGGGTTG  380
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1179  GGTTGCATTACTGCAGGAAGAAGTTCACGATCAAGGACTTGTGGGAAATGTTTTGGGTTG  1238

Query  381   TAATAATAAGTGTGATCGGTTCAAAGATACATATGCCATAACAGAAATTATCAAGGCCGA  440
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1239  TAATAATAAGTGTGATCGGTTCAAAGATACATATGCCATAACAGAAATTATCAAGGCCGA  1298

Query  441   GAGCTATTCACCACCTGATATAGAAAATGGCTTGAAGGATGTATCTGTGACCTTTCTAGT  500
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1299  GAGCTATTCACCACCTGATATAGAAAATGGCTTGAAGGATGTATCTGTGACCTTTCTAGT  1358

Query  501   TAAGAGGTCAGATGGAACAGAAGATGTTGTGGATAACAAGTTTATGAAGACGAATAATCC  560
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1359  TAAGAGGTCAGATGGAACAGAAGATGTTGTGGATAACAAGTTTATGAAGACGAATAATCC  1418

Query  561   ACTTTTGCTGATAAGCTATTACGAGAAGCATATTCAACATCATCCGTCTCTATGA  615
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1419  ACTTTTGCTGATAAGCTATTACGAGAAGCATATTCAACATCATCCGTCTCTATGA  1473


>Solyc01g081500.2 heterochromatin protein 1-like protein hp1L
Length=1576

 Score = 78.7 bits (42),  Expect = 8e-14
 Identities = 109/142 (77%), Gaps = 2/142 (1%)
 Strand=Plus/Plus

Query  477   GGATGTATCTGTGACCTTTCTAGTTAAGAGGTCAGATGGAACAGAAGATG-TTGTGGATA  535
             |||||| || ||||||||| | |  |||||| | |||||||    || || | |||||||
Sbjct  1145  GGATGTCTCAGTGACCTTTGTTGCCAAGAGGGCCGATGGAAATTTAG-TGCTGGTGGATA  1203

Query  536   ACAAGTTTATGAAGACGAATAATCCACTTTTGCTGATAAGCTATTACGAGAAGCATATTC  595
             |||||||| |||||| ||||||||||||| || ||||||  |  || ||| || |||| |
Sbjct  1204  ACAAGTTTCTGAAGATGAATAATCCACTTCTGTTGATAAATTTCTATGAGGAGAATATGC  1263

Query  596   AACATCATCCGTCTCTATGAGT  617
              | | |||||| ||  ||||||
Sbjct  1264  GATACCATCCGACTGAATGAGT  1285


 Score = 76.8 bits (41),  Expect = 3e-13
 Identities = 116/152 (76%), Gaps = 6/152 (4%)
 Strand=Plus/Plus

Query  152   TCACAAATGGATTTTCAATGGCTGATGGAACAGAATCACTTCAATCTGGTCGCTGCACAG  211
             |||||||||||||| | | || | ||||  ||||||    ||| |||| ||| || || |
Sbjct  859   TCACAAATGGATTTCCTAAGGTTAATGGTGCAGAATTTTATCAGTCTGATCGATGTACTG  918

Query  212   GAGCTAAAAGGAGGAAGTCTGCTTCTGTTCGGAGGTTTATACCGCAAGCTACTTCAGGTG  271
             ||||||||| |||||| |||| || ||||||||| |||| || | |  |||| |||| ||
Sbjct  919   GAGCTAAAAAGAGGAAATCTGGTTGTGTTCGGAGATTTAAACGGGAGACTACCTCAGCTG  978

Query  272   TAGTGAAGGATC-T--CCAAGATGCTGTAGCA  300
             | |  ||||||  |  |||||||||| |||||
Sbjct  979   T-G--AAGGATGATACCCAAGATGCTTTAGCA  1007



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 37043212143


  Database: Tomato Genome cDNA (ITAG release 2.40)
    Posted date:  Mar 21, 2024  3:33 PM
  Number of letters in database: 41,981,568
  Number of sequences in database:  34,725



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5