BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Untitled_sequence Length=1800 Score E Sequences producing significant alignments: (Bits) Value Solyc04g072220.2NAC-domain transcription factor (AHRD V1 *-** D3W... 3325 0.0 Solyc12g056790.1NAC Transcription Factor SlSRN1 571 6e-162 >Solyc04g072220.2 NAC-domain transcription factor (AHRD V1 *-** D3WFN5_WHEAT); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein Length=2231 Score = 3325 bits (1800), Expect = 0.0 Identities = 1800/1800 (100%), Gaps = 0/1800 (0%) Strand=Plus/Plus Query 1 ATGAAGGTTTTGATGGATTCAGTAGCAGCAGCTGCATCATCATCGCCTTGTAAAGAGGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 ATGAAGGTTTTGATGGATTCAGTAGCAGCAGCTGCATCATCATCGCCTTGTAAAGAGGTG 235 Query 61 AAGGTATCGGAATGTTTTGGAGAAAATAGTGTTTTTCCACCTGGGTTTAGGTTTCATCCG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 AAGGTATCGGAATGTTTTGGAGAAAATAGTGTTTTTCCACCTGGGTTTAGGTTTCATCCG 295 Query 121 ACAGATGAGGAGCTTGTTCTGTACTACTTGAAGAGGAAGATCTGTAGGCGCCGGATTTTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 ACAGATGAGGAGCTTGTTCTGTACTACTTGAAGAGGAAGATCTGTAGGCGCCGGATTTTG 355 Query 181 CTTGATGCGATTGGAGAGACGGATGTGTACAAGTGGGAGCCAGAGGATTTGCCTGATTTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 CTTGATGCGATTGGAGAGACGGATGTGTACAAGTGGGAGCCAGAGGATTTGCCTGATTTG 415 Query 241 TCCAAGTTAAAAACTGGGGACAGGCAGTGGTTCTTCTTTAGTCCCAGAGATCGAAAATAT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 TCCAAGTTAAAAACTGGGGACAGGCAGTGGTTCTTCTTTAGTCCCAGAGATCGAAAATAT 475 Query 301 CCCAATGGAGCACGGTCAAACAGGGCATCAAAGCACGGGTATTGGAAAGCTACTGGAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 CCCAATGGAGCACGGTCAAACAGGGCATCAAAGCACGGGTATTGGAAAGCTACTGGAAAA 535 Query 361 GATCGTATTATTACATGCAACTCTCGTGCTGTTGGAGTCAAGAAGACGCTGGTCTTTTAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 536 GATCGTATTATTACATGCAACTCTCGTGCTGTTGGAGTCAAGAAGACGCTGGTCTTTTAT 595 Query 421 AAAGGGCGAGCGCCAGTAGGTGAACGGACAGATTGGGTGATGCATGAGTACACCATGGAT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 596 AAAGGGCGAGCGCCAGTAGGTGAACGGACAGATTGGGTGATGCATGAGTACACCATGGAT 655 Query 481 GAAGAAGAGCTGAAGAGATGCCAGAATGTGCAGGACTACTATGCACTTTACAAGGTCTTC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 GAAGAAGAGCTGAAGAGATGCCAGAATGTGCAGGACTACTATGCACTTTACAAGGTCTTC 715 Query 541 AAGAAGAGTGGGCCTGGCCCCAAGAATGGTGAGCAATATGGTGCACCTTTTAGAGAAGAG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 AAGAAGAGTGGGCCTGGCCCCAAGAATGGTGAGCAATATGGTGCACCTTTTAGAGAAGAG 775 Query 601 GACTGGCTTGATGATGAGCGCCTAAATGCCAAAGTCTCTGTACAGCCGGAGAGCCCGAGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 GACTGGCTTGATGATGAGCGCCTAAATGCCAAAGTCTCTGTACAGCCGGAGAGCCCGAGA 835 Query 661 GATCAGGAGAATACTGCAAAGAACATTAATGTAGTTCCTGATCCTGATGATGCAATTGAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 GATCAGGAGAATACTGCAAAGAACATTAATGTAGTTCCTGATCCTGATGATGCAATTGAG 895 Query 721 GAATTGCTGAAGCGTCCTTTTACTGTAGATAACAATTTTGCATTGGAGCAGTTTGTTCAA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GAATTGCTGAAGCGTCCTTTTACTGTAGATAACAATTTTGCATTGGAGCAGTTTGTTCAA 955 Query 781 GAGGAAGATACTGAAAGCACCTTGCTAAATCAGTCTTCGAGGGATGTGAATTTATACAAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 GAGGAAGATACTGAAAGCACCTTGCTAAATCAGTCTTCGAGGGATGTGAATTTATACAAT 1015 Query 841 CATTGTGCTGTCGCTGGGCCAAGCTGCCAGCAGTATAATGCGAGGGCGAGCTTTGATCTG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 CATTGTGCTGTCGCTGGGCCAAGCTGCCAGCAGTATAATGCGAGGGCGAGCTTTGATCTG 1075 Query 901 ACAGAGTCAGGCACATCACCATTACATTTGCATGAGGCACCAGAAGTCTCATCTGCTCCG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1076 ACAGAGTCAGGCACATCACCATTACATTTGCATGAGGCACCAGAAGTCTCATCTGCTCCG 1135 Query 961 GTGAATCCTGAAAAGCCCCCATACGCGGTGGAAGAGGATTTCTTGGAAGATTTTTTGGAG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 GTGAATCCTGAAAAGCCCCCATACGCGGTGGAAGAGGATTTCTTGGAAGATTTTTTGGAG 1195 Query 1021 ATGGATGACCTCCTTGTTGTCGATCCAAATGTTCAAAACTTTGATCACGGAACCCCAAAT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 ATGGATGACCTCCTTGTTGTCGATCCAAATGTTCAAAACTTTGATCACGGAACCCCAAAT 1255 Query 1081 GGTCAAGTCTTTGACAAACCTGCTGGAAACCTGGAGACTCTGCAGTTTGATGACTTTGAT 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 GGTCAAGTCTTTGACAAACCTGCTGGAAACCTGGAGACTCTGCAGTTTGATGACTTTGAT 1315 Query 1141 GGCTTATCAGAGTTTGACCTGTATCATGATGCACCTTCACTTCTTGATAATGTGGGGACA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 GGCTTATCAGAGTTTGACCTGTATCATGATGCACCTTCACTTCTTGATAATGTGGGGACA 1375 Query 1201 CCAGTAGTGGGGCAAATTGCTGAACCATACATGAACAACTTTGTGAACGGAATTACATAT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 CCAGTAGTGGGGCAAATTGCTGAACCATACATGAACAACTTTGTGAACGGAATTACATAT 1435 Query 1261 CCTGACTCAACTACATACATGAGCGCTTTCCAAAATGACATGATGAACAACCAGCAGATG 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 CCTGACTCAACTACATACATGAGCGCTTTCCAAAATGACATGATGAACAACCAGCAGATG 1495 Query 1321 CGCTTGAATCATGAAAATCAGATAAACAATCAATTTTGGATGCATGATGAAAGATTCGGC 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1496 CGCTTGAATCATGAAAATCAGATAAACAATCAATTTTGGATGCATGATGAAAGATTCGGC 1555 Query 1381 GTCTTCAACCCCATTGAAGGAGATCAATCAGTTGTTGATCAATCATCTTCAGGTGTGGTA 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1556 GTCTTCAACCCCATTGAAGGAGATCAATCAGTTGTTGATCAATCATCTTCAGGTGTGGTA 1615 Query 1441 AATGATAATAATATGGCAAATTATCCTATGGGCGCTAATCAAAATCTAGCCAAAAAGGAT 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1616 AATGATAATAATATGGCAAATTATCCTATGGGCGCTAATCAAAATCTAGCCAAAAAGGAT 1675 Query 1501 GATGGTACGCAGTCGTGGTTCTCCTCTAATTTGTGGGCTTTCGTGGATTCTATACCCACA 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1676 GATGGTACGCAGTCGTGGTTCTCCTCTAATTTGTGGGCTTTCGTGGATTCTATACCCACA 1735 Query 1561 ACTCCTGCTTCAGCTGCTGAAAGTGCTCTTGTAGTTAACAGGGCCTTTGAGCGTATGTCT 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1736 ACTCCTGCTTCAGCTGCTGAAAGTGCTCTTGTAGTTAACAGGGCCTTTGAGCGTATGTCT 1795 Query 1621 AGCTTTAGTAGAATGAAATTAAATGTCGGGAACATGAATGTTGCTGCAGGTAATGCCTCT 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1796 AGCTTTAGTAGAATGAAATTAAATGTCGGGAACATGAATGTTGCTGCAGGTAATGCCTCT 1855 Query 1681 GCAACTTCAAGTAGTTCTGGCAAAGGCAAATATGGATTATGTTGTATTTCTTTACTTGGA 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1856 GCAACTTCAAGTAGTTCTGGCAAAGGCAAATATGGATTATGTTGTATTTCTTTACTTGGA 1915 Query 1741 GTACTTTGTGCATTCTTGTGGGTGGTAATAGGAACTTCTGCTAAAATCGCGGGGACATAG 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1916 GTACTTTGTGCATTCTTGTGGGTGGTAATAGGAACTTCTGCTAAAATCGCGGGGACATAG 1975 >Solyc12g056790.1 NAC Transcription Factor SlSRN1 Length=1773 Score = 571 bits (309), Expect = 6e-162 Identities = 476/559 (85%), Gaps = 2/559 (0%) Strand=Plus/Plus Query 84 AAATAGTGTTTTTCCACCTGGGTTTAGGTTTCATCCGACAGATGAGGAGCTTGTTCTGTA 143 ||| | |||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct 54 AAAGAATGTTTTTCCACCGGGATTTAGGTTTCATCCGACTGATGAAGAACTTGTTCTGTA 113 Query 144 CTACTTGAAGAGGAAGATCTGTAGGCGCCGGATTTTGCTTGATGCGATTGGAGAGACGGA 203 ||| ||||||| ||||||||| || ||||| |||||||||| |||| ||||| || Sbjct 114 CTATTTGAAGAAGAAGATCTGCGGGAAGAGGATTCTGCTTGATGCCATTGCTGAGACTGA 173 Query 204 TGTGTACAAGTGGGAGCCAGAGGATTTGCCTGATTTGTCCAAGTTAAAAACTGGGGACAG 263 ||| ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||| | Sbjct 174 TGTTTACAAATGGGAACCGGAGGACTTGCCTGATCTATCTAAGTTAAAAACTGGGGACCG 233 Query 264 GCAGTGGTTCTTCTTTAGTCCCAGAGATCGAAAATATCCCAATGGAGCACGGTCAAACAG 323 ||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||| Sbjct 234 CCAGTGGTTCTTCTTTAGCCCCAGAGATCGAAAGTATCCTAATGGAGCACGGGCAAACAG 293 Query 324 GGCATCAAAGCACGGGTATTGGAAAGCTACTGGAAAAGATCGTATTATTACATGCAACTC 383 || | |||||| ||| | ||||||| ||| ||||| ||||| || |||| |||||||| Sbjct 294 GGGAACAAAGCGTGGGCACTGGAAAGTTACAGGAAAGGATCGAATCATTATGTGCAACTC 353 Query 384 TCGTGCTGTTGGAGTCAAGAAGACGCTGGTCTTTTATAAAGGGCGAGCGCCAGTAGGTGA 443 ||||||||||||| | |||||||| || |||||||||||||| ||||| || |||||||| Sbjct 354 TCGTGCTGTTGGACTTAAGAAGACCCTAGTCTTTTATAAAGGCCGAGCACCGGTAGGTGA 413 Query 444 ACGGACAGATTGGGTGATGCATGAGTACACCATGGATGAAGAAGAGCTGAAGAGATGCCA 503 ||||||||| ||||||||||||||||| || |||||||||||||||||||| | ||| || Sbjct 414 ACGGACAGACTGGGTGATGCATGAGTATACTATGGATGAAGAAGAGCTGAAAAAATGTCA 473 Query 504 GAATGTGCAGGACTACTATGCACTTTACAAGGTCTTCAAGAAGAGTGGGCCTGGCCCCAA 563 || | |||||||||||||| ||||||||||| || ||||||||||| | || || || Sbjct 474 AAACGCCCAGGACTACTATGCGCTTTACAAGGTATTTAAGAAGAGTGGCTCCGGGCCTAA 533 Query 564 GAATGGTGAGCAATATGGTGCACCTTTTAGAGAAGAGGACTGGCTTGATGATGAGCG-CC 622 |||||||||||| |||||||||||||||||||||||||| ||| ||||||||| | || Sbjct 534 GAATGGTGAGCAGTATGGTGCACCTTTTAGAGAAGAGGAGTGGGCTGATGATGAATGTCC 593 Query 623 TAAATGCCAAAGTCTCTGT 641 || |||||||| || ||| Sbjct 594 TAG-TGCCAAAGGCTTTGT 611 Score = 322 bits (174), Expect = 6e-87 Identities = 680/920 (74%), Gaps = 51/920 (6%) Strand=Plus/Plus Query 889 AGCTTTGATCTGACAGAGTCAGGCACATCACCATTACATTTGCATGAGGCACCAGAAGTC 948 |||||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||||| Sbjct 835 AGCTTTGACTTGACACAGTCAGGCACATCACAGCGACAGTTGCATGAGGCACTAGAAGTC 894 Query 949 TCATCTGCTCCGGTGAATCCTGAAAAGCCCCCATACGCGGTGGAAGAGGATTTCTTGGA- 1007 |||||||||| || | | |||| ||| ||| | | ||||||||||||||| |||| Sbjct 895 ACATCTGCTCCTGTTATTTATGAACAGCAGCCACATGTGGTGGAAGAGGATTTTCTGGAG 954 Query 1008 A--GAT----TTTTTGG---AGATGGATGACCTC----C-TTG-T--TGTCGATCCAAAT 1050 | ||| || |||| ||| | | ||| | ||| | | | || | Sbjct 955 ATGGATGACCTTCTTGGCCCAGAGCCAAGCACTCAGAACTTTGATAACTTGGGGCCGTGT 1014 Query 1051 GTTCAAAACTTTGATCACGGAACCCCAAA-TGGTCAAGTCTTTGACAAACCTGCTGGAAA 1109 ||||||||||||||| | || | ||||| ||||||| |||||| | ||||||||||| Sbjct 1015 GTTCAAAACTTTGATGA-GGCAGGCCAAAGTGGTCAAAACTTTGATATGCCTGCTGGAAA 1073 Query 1110 CCT-GGAGACTCTGCAGTTTGATGACTTTGATGGCTTATCAGAGTTTGACCTGTATCATG 1168 | | | ||| | ||| || ||| | |||||||| || |||||||||||||||| |||| Sbjct 1074 CTTCGAAGA-TTTGCCATTCGATTATTTTGATGGGTTGGCAGAGTTTGACCTGTACCATG 1132 Query 1169 ATGCACCTTCACTT-CTTGATAATGTGGGGACACCAGTAGTGGGGCAAATTGCTGAACCA 1227 ||||| || ||| |||||| |||| | ||| | | ||||||||||| | |||||||| Sbjct 1133 ATGCA---TC-CTTGCTTGATGATGTAAGAACAACTGAAGTGGGGCAAAATACTGAACCA 1188 Query 1228 TACATGAACAACTTTGTGAACGGAATTAC-AT-ATCCTGACTCAACTACATACATGAGCG 1285 ||||||||||||| ||||| || || | | |||| || || || || || | | Sbjct 1189 CACATGAACAACTTAGTGAATGG--TTCTGTTAACCCTGCTTCTACAACGTATATAAACA 1246 Query 1286 CTTTCCAAAATGACATGATGAACAACCAGCAGATGCGCTTGAATCATGAAAATCAGATAA 1345 ||||||| |||| |||||||||||||||| ||| |||||| || | ||||| | Sbjct 1247 CTTTCCAGCATGAAATGATGAACAACCAGCCAATGTATTTGAATAATTCCGAACAGATTA 1306 Query 1346 ACAATCAATTTTGGATGCATGATGAAAGATTCGGCGTCTTCAACCCCATTGAAGGAGATC 1405 ||||||| | ||| | || ||| |||| ||| ||| |||||| | ||| | Sbjct 1307 GCAATCAACTGTGGGTACACGATCAAAGGTTCAATATCTCTTACCCCAGCG-AGG-CA-- 1362 Query 1406 AATCAGTT-GTTGATCAATCA--T-CTTCAGGTGTGGTAAATGATAATAATATGGCAAAT 1461 |||||||| |||| || || | |||||||||| ||| |||||| || | |||||||| Sbjct 1363 AATCAGTTGGTTGCTCCTCCAGCTACTTCAGGTGTTGTATATGATAGTATTTTGGCAAAT 1422 Query 1462 TATCCTATGGGCGCTAATCAAAATC---TAGCCAAAAAGGATGATGGTACGCAGTCGTGG 1518 ||||||||| ||| |||||||||| || |||| | ||||| ||||| | || ||| Sbjct 1423 CATCCTATGGACGCAAATCAAAATCAACTACCCAATCAAGATGAAGGTACACCATCATGG 1482 Query 1519 TTCTCCTCTAATTTGTGGGCTTTCGTGGATTCTATACCCACAACTCCTGCTTCAGCTGCT 1578 || ||||| | |||||||| ||||||||||||||||| || |||||||| ||||||| Sbjct 1483 TTAACCTCTCAGTTGTGGGCCTTCGTGGATTCTATACCTACTGCTCCTGCTATAGCTGCT 1542 Query 1579 GAAAGTGCTCTTGTAGTTAACAGGGCCTTTGAGCGTATGTCTAGCTTTAGTAGAATGAAA 1638 |||||| | | ||| ||||| || |||||| |||| |||||||||||||||| |||| | Sbjct 1543 GAAAGT-C-C-TGTGGTTAATAGTGCCTTTAAGCGCATGTCTAGCTTTAGTAAGATGAGA 1599 Query 1639 TTAAATGTCGGGAACATGAATGTTGCTGCAG--G-TAATGCCTCTGCAACTTCAAGTAGT 1695 |||| | | |||||||||||||||| |||| | ||| | | ||||||||||| ||| Sbjct 1600 ATAAACGCCAGGAACATGAATGTTGCGGCAGCAGGTAA--CA-CAGCAACTTCAAGAAGT 1656 Query 1696 TCTGGCAAAGGCAAATATGGATTATGTTGTATTTCTTTACTTGGAGTACTTTGTGCATTC 1755 || || | || |||| | | || | ||||||| ||||| |||| |||||| || Sbjct 1657 TCGCGCTACTCTAAGAATGGGCTTTTTTATTTTTCTTTTGTTGGAATACTGTGTGCAATC 1716 Query 1756 TTGTGGGTGGTAATAGGAAC 1775 || || || || ||||||| Sbjct 1717 TTATGTGTATTACTAGGAAC 1736 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72873645732 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5