BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Capsicum annuum zunla Genome CDS (v2.0) 35,336 sequences; 36,029,754 total letters Query= Untitled_sequence Length=609 Score E Sequences producing significant alignments: (Bits) Value Capana06g003037TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 ... 544 3e-154 Capana06g002932TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 ... 396 1e-109 Capana03g003555TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 ... 257 5e-68 Capana06g000011TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 ... 222 2e-57 Capana06g003032TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 ... 198 3e-50 >Capana06g003037 TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2 Length=1272 Score = 544 bits (294), Expect = 3e-154 Identities = 326/341 (96%), Gaps = 3/341 (1%) Strand=Plus/Plus Query 269 GCTGGCTAA-T-CAGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCT 326 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 GCT-GCTAACTGCAGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCT 500 Query 327 GAGTGGTCATTGGCTTAGTCATTTTCCTGATAGCTGCACATCGCTTGTGTCACTTAACAT 386 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 501 GAGTGGTCATTGGCTTAGTCATTTTCCTGATAGCTGCACATCGCTCGTGTCACTTAACAT 560 Query 387 TGCTTGTTTGGCTTCGGAGATCAGCTTCTCAGCTTTGGAGCGTCTAGTTGCTCGCTCTCC 446 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 561 TGCTTGTTTGGCTTCGGAGGTCAGCTTCTCAGCTTTGGAGCGTCTAGTTGCTCGCTCTCC 620 Query 447 TCATTTGAGAACTCTTCGGCTCAATCGCGCTGTTTCCATCGAGAAATTTCCAAAGTTACT 506 ||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||| |||| Sbjct 621 TCATTTGAGGACTCTTCGGCTCAATCGTGCTGTGTCCATCGAGAAACTTCCAAAGCTACT 680 Query 507 TCGTCATGCTTCACATTTGGTTGAATTTGGTACTGGATCTTACTCGGCTGACACACAGGC 566 ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 681 TCGTCATGCTTCACAGTTGGTTGAATTTGGTACCGGATCTTACTCAGCTGACACACAGGT 740 Query 567 TGATGTTTCTGAAGTTTTCGTAAATGTATCTCAGGCTTTTT 607 ||||||||| ||||||||||||||||||||||||||||||| Sbjct 741 TGATGTTTCCGAAGTTTTCGTAAATGTATCTCAGGCTTTTT 781 >Capana06g002932 TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2 Length=810 Score = 396 bits (214), Expect = 1e-109 Identities = 243/257 (95%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 280 AGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCTGAGTGGTCATTGG 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 AGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCTGAGTGGTCATTGG 234 Query 340 CTTAGTCATTTTCCTGATAGCTGCACATCGCTTGTGTCACTTAACATTGCTTGTTTGGCT 399 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 235 CTTAGTCATTTTCCTGATAGCTGCACATCGCTCGTTTCACTTAACATTGCTTGTTTGGCT 294 Query 400 TCGGAGATCAGCTTCTCAGCTTTGGAGCGTCTAGTTGCTCGCTCTCCTCATTTGAGAACT 459 |||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 295 TCGGAGGTCAGATTCTCAGCTTTGGAGCGTCTAGTTTCTCGCTCTCCTCATTTGAGAACT 354 Query 460 CTTCGGCTCAATCGCGCTGTTTCCATCGAGAAATTTCCAAAGTTACTTCGTCATGCTTCA 519 |||| |||||||| ||||| |||||||||||| |||||||| |||||| ||||||||| Sbjct 355 CTTCATCTCAATCGTGCTGTGTCCATCGAGAAACTTCCAAAGCTACTTC-TCATGCTTCT 413 Query 520 CATTTGGTTGAATTTGG 536 || |||||||||||||| Sbjct 414 CAGTTGGTTGAATTTGG 430 Score = 278 bits (150), Expect = 4e-74 Identities = 168/177 (95%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 1 ATGCGATCCCTTTGGATGTCCAACTGTTCAGTAAGTTTTGAAGCATGTAAGCTGCTATCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1 ATGCGATCCCTTTGGATGTCCAACTGTTCAGTAAGTTTTGAAGCATGTAAACTGCTAGCT 60 Query 61 CCAAAGTTGCCAGGGTTTAATGTTGAATTTATAGATGAGAGGGGTCATCCGGATAAGAGA 120 | |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| Sbjct 61 CAGAAGTTGCCAGGGTTTAATGTTGAAGTTATAGATGAGAGCGGTCATCCGGATACGAGA 120 Query 121 CCAGAAAGTTGCCCCGATGAGAAGCTTCACATATATAGGAAAGTGTCAGGAAGGAGG 177 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 121 CCAGAAAGTTGCCCCAATGAGAAACTTCACATATATAGGAAAGTGTCAGGAAGGAGG 177 >Capana03g003555 TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2 Length=1728 Score = 257 bits (139), Expect = 5e-68 Identities = 238/287 (83%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 273 GCTAA-T-CAGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCTGAGT 330 ||||| | |||||||||||||||| | ||||||||||| ||||||||||| ||||| ||| Sbjct 445 GCTAATTGCAGGAATCTGAGAGAACTAGACTTGGGAGAGAGTGAAGTGGAGGACCTTAGT 504 Query 331 GGTCATTGGCTTAGTCATTTTCCTGATAGCTGCACATCGCTTGTGTCACTTAACATTGCT 390 || |||||||| || |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct 505 GGACATTGGCTAAGCCATTTTCCCGATAGCTGCACGTCACTTGTTTCTCTTAACATTGCC 564 Query 391 TGTTTGGCTTCGGAGATCAGCTTCTCAGCTTTGGAGCGTCTAGTTGCTCGCTCTCCTCAT 450 ||||||| ||||||| |||| |||| |||||||||||| || |||||||| |||||| || Sbjct 565 TGTTTGGTTTCGGAGGTCAGTTTCTTAGCTTTGGAGCGCCTGGTTGCTCGTTCTCCTAAT 624 Query 451 TTGAGAACTCTTCGGCTCAATCGCGCTGTTTCCATCGAGAAATTTCCAAAGTTACTTCGT 510 ||||| ||||| ||| | ||||| || ||| || | ||||| ||||| | | |||||| Sbjct 625 TTGAGGACTCTACGGATAAATCGTGCCGTTCCCCTTGAGAAGCTTCCATACCTGCTTCGT 684 Query 511 CATGCTTCACATTTGGTTGAATTTGGTACTGGATCTTACTCGGCTGA 557 | |||| || ||||| ||||||||||| || ||||||| ||||| Sbjct 685 CGCACTTCCCAGTTGGTCGAATTTGGTACAGGTGCTTACTCTGCTGA 731 Score = 143 bits (77), Expect = 1e-33 Identities = 145/179 (81%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1 ATGCGATCCCTTTGGATGTCCAACTGTTCAGTAAGTTTTGAAGCATGTAAGCTGCTATCT 60 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||| || Sbjct 1510 ATGCGATCCCTTTGGATGTCTTCGTGTTCAATAAGTTTTGAAGCATGTAAGATGCTAGCT 1569 Query 61 CCAAAGTTGCCAGGGTTTAATGTTGAATTTATAGATGAGAGGGGTCATCCGGATAAGAGA 120 | ||| |||| || ||||||| ||| | |||||||| ||||||| ||| |||| || Sbjct 1570 CAGAAGATGCCTAGGCTTAATGTGGAAGTAATAGATGAAAGGGGTCCTCCAGATACAAGG 1629 Query 121 CCAGAAAGTTGCCCCGATGAGAAGCTTCACATATATAGGAAAGTGTCAGGAAGGAGGTT 179 |||||||| ||||| | ||||||||| |||||||| | |||| | ||| ||||||| Sbjct 1630 CCAGAAAGCTGCCCTGTGGAGAAGCTTTACATATATCGATCAGTGGCTGGACGGAGGTT 1688 >Capana06g000011 TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2 Length=1743 Score = 222 bits (120), Expect = 2e-57 Identities = 246/308 (80%), Gaps = 3/308 (1%) Strand=Plus/Plus Query 269 GCTGGCTAA-T-CAGGAATCTGAGAGAATTGGACTTGGGAGAAAGTGAAGTGGAAGACCT 326 ||| ||||| | |||||||||||||||| | ||||||||||||||||||||||| ||||| Sbjct 448 GCT-GCTAACTGCAGGAATCTGAGAGAACTAGACTTGGGAGAAAGTGAAGTGGAGGACCT 506 Query 327 GAGTGGTCATTGGCTTAGTCATTTTCCTGATAGCTGCACATCGCTTGTGTCACTTAACAT 386 ||| || ||||||| ||||||||||||||| |||| || || || |||| ||||||||| Sbjct 507 AAGTAGTGATTGGCTCAGTCATTTTCCTGATGGCTGTACTTCACTGGTGTTACTTAACAT 566 Query 387 TGCTTGTTTGGCTTCGGAGATCAGCTTCTCAGCTTTGGAGCGTCTAGTTGCTCGCTCTCC 446 | ||||||||| ||| ||||||| |||||| | | |||||||||| || || | ||||| Sbjct 567 TTCTTGTTTGGGTTCTGAGATCAACTTCTCGGATCTGGAGCGTCTGATTACTTGTTCTCC 626 Query 447 TCATTTGAGAACTCTTCGGCTCAATCGCGCTGTTTCCATCGAGAAATTTCCAAAGTTACT 506 | |||||| || |||||||||| || ||||| || | || || ||||| | || | Sbjct 627 TAATTTGAAGACACTTCGGCTCAGTCAAGCTGTGCCCCTTGAAAAGCTTCCAGACCTATT 686 Query 507 TCGTCATGCTTCACATTTGGTTGAATTTGGTACTGGATCTTACTCGGCTGACACACAGGC 566 | | |||| |||| ||||||||||||||||| || | ||||| |||| |||| | Sbjct 687 ATGCCGTGCTCCACAATTGGTTGAATTTGGTACAGGTGCCTACTCCTCTGAGGTACAGTC 746 Query 567 TGATGTTT 574 |||||||| Sbjct 747 TGATGTTT 754 Score = 89.8 bits (48), Expect = 2e-17 Identities = 127/166 (77%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 1 ATGCGATCCCTTTGGATGTCCAACTGTTCAGTAAGTTTTGAAGCATGTAAGCTGCTATCT 60 ||| |||||||||||||||| ||||| |||||||||| ||| ||| |||||||| | Sbjct 1516 ATGAGATCCCTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCCTGTGAGCTGCTAAGT 1575 Query 61 CCAAAGTTGCCAGGGTTTAATGTTGAATTTATAGATGAGAGGGGTCATCCGGATAAG-AG 119 | ||| |||| || ||||| ||||| |||||||||||| |||| ||| || | | || Sbjct 1576 CAGAAGATGCCTAGGCTTAATATTGAAGTTATAGATGAGAATGGTCCTCCCGACACGCAG 1635 Query 120 ACCAGAAAGTTGCCCCGATGAGAAGCTTCACATATATAGGAAAGTG 165 | ||||| || || | ||| || ||| ||||||| ||| |||| Sbjct 1636 TCG-GAAAGCTGTCCTGTTGAAAAACTTTACATATACCGGACAGTG 1680 >Capana06g003032 TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2 Length=822 Score = 198 bits (107), Expect = 3e-50 Identities = 153/176 (87%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1 ATGCGATCCCTTTGGATGTCCAACTGTTCAGTAAGTTTTGAAGCATGTAAGCTGCTATCT 60 |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | Sbjct 586 ATGCGATCCCTTTGGATGTCCAACTGTTTAGAAAGTTTTGAAGCATGTAAGCTGCTAGCA 645 Query 61 CCAAAGTTGCCAGGGTTTAATGTTGAATTTATAGATGAGAGGGGTCATCCGGATAAGAGA 120 | |||||||||| | || ||| |||| ||||||| |||||||||||| ||||| ||| Sbjct 646 CAGAAGTTGCCAGAGCTTGATGCTGAAGTTATAGACAAGAGGGGTCATCTGGATACGAGG 705 Query 121 CCAGAAAGTTGCCCCGATGAGAAGCTTCACATATATAGGAAAGTGTCAGGAAGGAG 176 ||||||||||||| || |||||| ||| ||||||| |||| | ||||||||||||| Sbjct 706 CCAGAAAGTTGCCTCGTTGAGAAACTTTACATATACAGGACAATGTCAGGAAGGAG 761 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20581288650 Database: Capsicum annuum zunla Genome CDS (v2.0) Posted date: Mar 21, 2024 3:56 PM Number of letters in database: 36,029,754 Number of sequences in database: 35,336 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5