BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Capsicum annuum cv CM334 Genome CDS (release 1.55)
           34,899 sequences; 35,244,093 total letters



Query= Untitled_sequence

Length=259
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

CA03g08510PREDICTED: E3 ubiquitin-protein ligase BAH1-like [Solan...  477     1e-134


>CA03g08510 PREDICTED: E3 ubiquitin-protein ligase BAH1-like [Solanum lycopersicum]
Length=765

 Score = 477 bits (258),  Expect = 1e-134
 Identities = 258/258 (100%), Gaps = 0/258 (0%)
 Strand=Plus/Plus

Query  1    AGATTCATTATTCCAAGCAAGGCCAGGCATTCAAGTCGCAAGCTCAAAGTATGCACATTG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  206  AGATTCATTATTCCAAGCAAGGCCAGGCATTCAAGTCGCAAGCTCAAAGTATGCACATTG  265

Query  61   AGATCCTTCAGTCCCCCTGGCTGTGTGAACTTATGGCTTTTCACATCAATTTGAGAGAAA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  266  AGATCCTTCAGTCCCCCTGGCTGTGTGAACTTATGGCTTTTCACATCAATTTGAGAGAAA  325

Query  121  ACAAGGAAAAAAATGGAAAAGCTCTTGCACTTTTTGATGGTTGCTTCCTGGCGTTCAGTG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  326  ACAAGGAAAAAAATGGAAAAGCTCTTGCACTTTTTGATGGTTGCTTCCTGGCGTTCAGTG  385

Query  181  AAGGGAAACCATCTCTCACTTGTGAGCTCTTTGATTCTATCAAGCTTGATATTGATTTGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  386  AAGGGAAACCATCTCTCACTTGTGAGCTCTTTGATTCTATCAAGCTTGATATTGATTTGA  445

Query  241  CCTGTTCCATTTGTTTGG  258
            ||||||||||||||||||
Sbjct  446  CCTGTTCCATTTGTTTGG  463



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 8128174176


  Database: Capsicum annuum cv CM334 Genome CDS (release 1.55)
    Posted date:  Mar 21, 2024  3:37 PM
  Number of letters in database: 35,244,093
  Number of sequences in database:  34,899



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5