BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=1323 Score E Sequences producing significant alignments: (Bits) Value Solyc02g079760.3.1 2444 0.0 Solyc03g031450.3.1 252 5e-66 Solyc07g063830.3.1 154 1e-36 Solyc10g006640.3.1 121 1e-26 >Solyc02g079760.3.1 Length=1323 Score = 2444 bits (1323), Expect = 0.0 Identities = 1323/1323 (100%), Gaps = 0/1323 (0%) Strand=Plus/Plus Query 1 ATGGCTGATGAATATCAAGCAAGTGTTTGTGGAGGAAACTGGTGGAATTCAAGTAGAAGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTGATGAATATCAAGCAAGTGTTTGTGGAGGAAACTGGTGGAATTCAAGTAGAAGT 60 Query 61 ATATTTGGTTCATCACTATGTGCATCTTCAGTTCCTTTAGGAAACTCTAATTTTGCATGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATATTTGGTTCATCACTATGTGCATCTTCAGTTCCTTTAGGAAACTCTAATTTTGCATGG 120 Query 121 ACAAACGATCATTTGTTGGATATGAAATCTTCCTGTAGGTCTAACGATGAATCTGGTAAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACAAACGATCATTTGTTGGATATGAAATCTTCCTGTAGGTCTAACGATGAATCTGGTAAT 180 Query 181 TCCGATGAATCTGTCGTTCTTCAAGAATTACCTAAACATGATTCCACCCTACAAATCTTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCCGATGAATCTGTCGTTCTTCAAGAATTACCTAAACATGATTCCACCCTACAAATCTTG 240 Query 241 GGTAGTGGCCTTAATTCTTCATCAACAAATGATAATTGGAGTCATACCTTGATGCATGGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGTAGTGGCCTTAATTCTTCATCAACAAATGATAATTGGAGTCATACCTTGATGCATGGA 300 Query 301 AATGATAGGAGTGAAAGTAGTTATCCTTCAATACTACAGCAAGAAGATATAAATTCAAGC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AATGATAGGAGTGAAAGTAGTTATCCTTCAATACTACAGCAAGAAGATATAAATTCAAGC 360 Query 361 ATGAATTACCAACAAGAAAGTGGTGTTGATTGTTCAAGCAACTCATTTAAGCAAGATTTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATGAATTACCAACAAGAAAGTGGTGTTGATTGTTCAAGCAACTCATTTAAGCAAGATTTC 420 Query 421 ACTTTAGGAATGAATCATCCAATCACTAGCTCAACTAATACTCATCATGATCAAATTTCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 ACTTTAGGAATGAATCATCCAATCACTAGCTCAACTAATACTCATCATGATCAAATTTCT 480 Query 481 TCAACCTTTCCAATGAATTCATCTTTCTCTAATTATCCTTCAGCTTTACTTCAAACTTTA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TCAACCTTTCCAATGAATTCATCTTTCTCTAATTATCCTTCAGCTTTACTTCAAACTTTA 540 Query 541 TTTGATAACGATCCTCCTCAACAACAACAATTACAACAATCTTTGTTTGCTACTAATAAC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTTGATAACGATCCTCCTCAACAACAACAATTACAACAATCTTTGTTTGCTACTAATAAC 600 Query 601 AACCAACCAATGAATTTCCCAACATCATCCTTAAACTATAGGCCTGATTTGAATGACTTT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AACCAACCAATGAATTTCCCAACATCATCCTTAAACTATAGGCCTGATTTGAATGACTTT 660 Query 661 TCACCTTCTATGCCTAAATTCCCTAATTCCTTGTTGATACCAAAACAAACTACAACACCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TCACCTTCTATGCCTAAATTCCCTAATTCCTTGTTGATACCAAAACAAACTACAACACCT 720 Query 721 TCGAATCATTTTCCAAATTACTCTCTTAATGCTACTGCCTCTCTCTACAATACTTCATCA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TCGAATCATTTTCCAAATTACTCTCTTAATGCTACTGCCTCTCTCTACAATACTTCATCA 780 Query 781 GCCACATCCTTAAACAATATGCGCGCTACTCTTATGCCTTCTATGCATCCACAAATTCTC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GCCACATCCTTAAACAATATGCGCGCTACTCTTATGCCTTCTATGCATCCACAAATTCTC 840 Query 841 CAGTCACCAACATTTAACGACAATTCCAGAGCTCCTAACGTTACTCCAAAGAGTAAAGTT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CAGTCACCAACATTTAACGACAATTCCAGAGCTCCTAACGTTACTCCAAAGAGTAAAGTT 900 Query 901 GAAGATTTAAGAGAGTCGAGGGTGAGTAAGAAAAGTGTGACTAATGAAGCAACATTGAAG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 GAAGATTTAAGAGAGTCGAGGGTGAGTAAGAAAAGTGTGACTAATGAAGCAACATTGAAG 960 Query 961 AGGGCAAGAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AGGGCAAGAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTG 1020 Query 1021 GGGGACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GGGGACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCT 1080 Query 1081 TCAGTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCAAGTCAATGCTCTT 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 TCAGTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCAAGTCAATGCTCTT 1140 Query 1141 AGTACTCCTTATTTGAAAAATGGATCAACCACCACTCAACACCAACAGATTGCTGATAAG 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 AGTACTCCTTATTTGAAAAATGGATCAACCACCACTCAACACCAACAGATTGCTGATAAG 1200 Query 1201 GTGAAGGAAGAAGATTTAAGGAGCCGAGGATTGTGTCTGGTACCGATATCGAGTACTTTT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 GTGAAGGAAGAAGATTTAAGGAGCCGAGGATTGTGTCTGGTACCGATATCGAGTACTTTT 1260 Query 1261 CCAGTAGCAACTGAAAGTAGTACAGATTTTTGGACTCCAAATTTTGGTGGTACGTTCAGG 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 CCAGTAGCAACTGAAAGTAGTACAGATTTTTGGACTCCAAATTTTGGTGGTACGTTCAGG 1320 Query 1321 TAG 1323 ||| Sbjct 1321 TAG 1323 >Solyc03g031450.3.1 Length=1017 Score = 252 bits (136), Expect = 5e-66 Identities = 280/349 (80%), Gaps = 11/349 (3%) Strand=Plus/Plus Query 963 GGCA-AGAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTGG 1021 |||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||| Sbjct 650 GGCAGAGAATTGAGACACCATCATCATTGCCAACTTTTAAGGTGAGAAAAGAGAAACTGG 709 Query 1022 GGGACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCTT 1081 | ||| | || ||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 710 GTGACAGGATAACTGCCCTCCAGCAATTGGTTTCACCTTTTGGAAAGACTGATACAGCTT 769 Query 1082 CAGTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCAAGTCAATGCTCTTA 1141 |||||||||| ||||| || || |||||||| || || |||||||||||||||| ||| Sbjct 770 CAGTTCTCCAAGAAGCAATCGAATACATCAATTTTCTTCATGATCAAGTCAATGTATTTA 829 Query 1142 GTACTCCTTATTTGAAAAATGGATCAACCACCACTCAACACCAACAGATTGCTG-ATAAG 1200 | | || ||| ||||||||||| || |||| | ||||| |||||| || | || | Sbjct 830 GCAATCGATATATGAAAAATGGACCACCCAC-A--CAACATCAACAGGTTAAGGAATTAC 886 Query 1201 GTGAAGGA--AGAAGAT---TTAAGGAGCCGAGGATTGTGTCTGGTACCGATATCGAGTA 1255 |||||| | || | ||||||||| |||| | ||| | ||||| ||||| |||| Sbjct 887 AAGAAGGATTAAAACAAGGGTTAAGGAGCAAAGGACTATGTTTAGTACCAATATCAAGTA 946 Query 1256 CTTTTCCAGTAGCAACTGAAAGTAGTACAGATTTTTGGACTCCAA-ATT 1303 | || ||| ||||| |||| | || || || |||||||| |||| ||| Sbjct 947 CATTCCCATTAGCAGCTGAGACTACTATGGAATTTTGGACACCAACATT 995 >Solyc07g063830.3.1 Length=1440 Score = 154 bits (83), Expect = 1e-36 Identities = 163/202 (81%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 965 CAA-GAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTGGGG 1023 ||| |||| || ||||||| ||||||||| |||||||||| || ||||||||| |||| Sbjct 1064 CAAGGAATGAAG-CACCATCTCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAAATGGGA 1122 Query 1024 GACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCTTCA 1083 ||| | || ||||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct 1123 GACAGAATCACTGCACTTCAACAATTAGTCTCACCTTTTGGAAAGACTGATACAGCTTCT 1182 Query 1084 GTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCAAGTCAATGCTCTT-AG 1142 || || ||||| || |||||||| |||||||||||||| ||||| |||| | || || Sbjct 1183 GTGCTATCGGAAGCAATCGAGTACATAAAGTTCCTCCATGACCAAGTTAATG-TATTAAG 1241 Query 1143 TACTCCTTATTTGAAAAATGGA 1164 || || || |||||| |||| Sbjct 1242 CACCCCATACATGAAAAGTGGA 1263 >Solyc10g006640.3.1 Length=1161 Score = 121 bits (65), Expect = 1e-26 Identities = 110/132 (83%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 998 TTAAGGTCAGAAAAGAGAAATTGGGGGACCGTATTACTGCTCTCCAGCAATTGGTTTCAC 1057 ||||||| |||||||||||| |||| ||| | || ||||| || || ||||| || |||| Sbjct 821 TTAAGGTGAGAAAAGAGAAAATGGGAGACAGAATCACTGCACTTCAACAATTAGTCTCAC 880 Query 1058 CTTTCGGAAAGACTGATACAGCTTCAGT-TCTCCATGAAGCTATTGAGTACATCAAGTTC 1116 |||| |||||||| ||||||||||| || | || ||||| |||||||| || |||||| Sbjct 881 CTTTTGGAAAGACAGATACAGCTTCTGTATTATCA-GAAGCAATTGAGTATATAAAGTTC 939 Query 1117 CTCCATGATCAA 1128 |||||||||||| Sbjct 940 CTCCATGATCAA 951 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44315965540 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5